MD05G1050100.v1.1

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0002525
Physical Location & Seq
Reverse (-)
8680062 .. 8681450
1389 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1050100.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGGAAAACTACTCATACAACTCCTATCCCGAGTCCGGCAACTCGTCCCCACGGTCCCGAGATATTGATTTCGAGAACACTCCGCCATGGGAGGTCGACCCAGCCAATTCTCAGACCCAAAGCTACAAGGCCAAGTTCATGTGCAGCTACGGCGGAAAGATCCTCCCTCGCCCGCACGACAACCAGCTCTGCTACGTCGGCGGTGAGACCAAGATTTTCTCCGTCGATCGCAACATCAAGTTCGCCGCCATCATTTCCAAGCTCTCCTCCCTCTCCGAGTACGACGTGGCGTTCAAGTACCAACTCCCCGGCGAAGACCTCGACGCCTTGATCTCCGTTACCAGCGACGACGACTTGGAGCACATGATGCACGAGTACGATCGCCTTTACCGTGCTTCCGCTAGGCCCGCCCGCATGAGATTGTTCCTCTTTAATGCGAGCCCCAACGGTGGATTCGGGTCGGATGATGGAAGGTCCAATAAGGATCGGTTCGTCGAGGCTCTTAATTCGGGTCCCACCCAGGCGCCCTACCTGAATTCCAAGCCTCCGGTCCAAAATAATGTGGAATTTCTCTTCGGCATGGAAAAGGGTGTCGTCCCTGCTGCCGTGGCGCCTCCTCCTCCTCCGGCTCCGATACCGGAACAAGTTGCGCCGCCGCCTGACTTTGTCAGATCGGGCCACACAGAACGGGTTATCGGATCGGATCCGGTGGTGAGTCCGGTGGAGTTCCAAAGGCAATTGCAGAGGCTACAAATCGGAGAACAAGATCAGCAAGCTATGTACGGGAGAAAGAACGACGACAATCTCGTCGGAGGCTATAGCGGCTCTGGAGATTATTACGTACAGAAGATGCCGGAGAAGGCTCCTCCGGTGACGGCTGCGCCGCCAGCTGGCTACTGGCCGGAGATTTCTAGCGGGGGGTTTCCGGGGATAGGAGCTCCGGAACAGCCGATGTATATGTTTACATCCGCACCCGGAGGCGGGGCAGTGTACCACGCACAACCACCGATGGTACGACCGGTAACCGGGCCACCGGGTCAAGAGTACTACCACGTGCAGCAGCGAGTGGGATCTGAAATTTACCGGGAACAACCGCCGAGGTACAATGTAGTGCCACAACCGCAGCAGCAGCAGCAGAGTACTCTCCCACCACAGCCGCCAAAATACGTGGCGACGTACGCCGACACAACACCGTATGCACAGGTGGCGTACGATAGCACGACGGGGAGACAGGTATACTATAGTGCGCCGGGAGGGGTTGTGCAGCAACAGCAGCAGGCGTATCAAGCCGTGGGCCCCGCGGCGGTGGGCGGAGAAATGCGAGCGGCTGGCGCGTTGGGTCAGGAGGGTAAGGTGGTGGGTTCAAAGCTCCCTCAAGCTTCAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

463

Amino Acids

50.44

Weight (kDa)

5.31

Isoelectric Point (pI)

57.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 59 - 145 1.1e-17 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 806
AccB1I GGYRCC 2 cut(s) 523, 610
AccBSI CCGCTC 1 cut(s) 1325
AccI GTMKAC 2 cut(s) 96, 1236
AccII CGCG 2 cut(s) 1301, 1334
AccIII TCCGGA 1 cut(s) 940
AclWI GGATC 6 cut(s) 154, 492, 698, 706, 711, 1078
AcoI YGGCCR 1 cut(s) 899
AcsI RAATTY 3 cut(s) 535, 566, 1077
AcuI CTGAAG 1 cut(s) 1365
AcvI CACGTG 1 cut(s) 1054
AcyI GRCGYC 3 cut(s) 324, 524, 611
AfiI CCNNNNNNNGG 8 cut(s) 35, 449, 890, 932, 980, 981, 1025, 1303
AgeI ACCGGT 1 cut(s) 1018
AgsI TTSAA 2 cut(s) 295, 1365
AjiI CACGTC 1 cut(s) 286
AjnI CCWGG 1 cut(s) 519
AjuI GAANNNNNNNTTGG 2 cut(s) 437, 469
AluBI AGCT 9 cut(s) 123, 147, 187, 262, 776, 890, 938, 1369, 1379
AluI AGCT 9 cut(s) 123, 147, 187, 262, 776, 890, 938, 1369, 1379
Alw21I GWGCWC 2 cut(s) 363, 940
Alw26I GTCTC 2 cut(s) 200, 1222
AlwI GGATC 6 cut(s) 154, 492, 698, 706, 711, 1078
Ama87I CYCGRG 2 cut(s) 29, 57
Aor13HI TCCGGA 1 cut(s) 940
AoxI GGCC 6 cut(s) 129, 404, 676, 899, 1028, 1294
ApaI GGGCCC 1 cut(s) 1298
ApoI RAATTY 3 cut(s) 535, 566, 1077
AsiGI ACCGGT 1 cut(s) 1018
AspLEI GCGC 6 cut(s) 526, 613, 652, 883, 1249, 1334
AspS9I GGNCC 9 cut(s) 54, 405, 474, 512, 550, 676, 1028, 1294, 1295
AsuC2I CCSGG 7 cut(s) 309, 927, 975, 1027, 1035, 1085, 1251
AsuHPI GGTGA 3 cut(s) 215, 724, 883
AvaI CYCGRG 2 cut(s) 29, 57
AvaII GGWCC 4 cut(s) 54, 474, 512, 550
BaeGI GKGCMC 1 cut(s) 1298
BamHI GGATCC 1 cut(s) 703
BanI GGYRCC 2 cut(s) 523, 610
BanII GRGCYC 3 cut(s) 443, 940, 1298
BauI CACGAG 1 cut(s) 371
BbrPI CACGTG 1 cut(s) 1054
BbsI GAAGAC 1 cut(s) 321
Bbv12I GWGCWC 2 cut(s) 363, 940
BccI CCATC 3 cut(s) 257, 461, 1003
BceAI ACGGC 4 cut(s) 166, 590, 891, 1274
BciT130I CCWGG 1 cut(s) 521
BcnI CCSGG 7 cut(s) 309, 927, 975, 1027, 1035, 1085, 1251
BcoDI GTCTC 2 cut(s) 200, 1222
BfaI CTAG 2 cut(s) 402, 912
BfmI CTRYAG 2 cut(s) 817, 1240
BfoI RGCGCY 2 cut(s) 527, 614
BmcAI AGTACT 2 cut(s) 1046, 1141
Bme1390I CCNGG 8 cut(s) 309, 521, 927, 975, 1027, 1035, 1085, 1251
Bme18I GGWCC 4 cut(s) 54, 474, 512, 550
BmeT110I CYCGRG 2 cut(s) 29, 57
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 9 cut(s) 54, 405, 474, 512, 550, 676, 1028, 1294, 1295
BmrFI CCNGG 8 cut(s) 309, 521, 927, 975, 1027, 1035, 1085, 1251
BmsI GCATC 2 cut(s) 357, 840
BpiI GAAGAC 1 cut(s) 321
BpmI CTGGAG 1 cut(s) 849
BpuEI CTTGAG 1 cut(s) 1359
BpuMI CCSGG 7 cut(s) 309, 927, 975, 1027, 1035, 1085, 1251
BsaAI YACGTR 3 cut(s) 841, 1054, 1168
BsaHI GRCGYC 3 cut(s) 324, 524, 611
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 9 cut(s) 50, 86, 307, 519, 606, 926, 1097, 1290, 1299
BsaWI WCCGGW 7 cut(s) 547, 637, 706, 718, 868, 940, 1018
BsaXI ACNNNNNCTCC 2 cut(s) 1245, 1275
Bsc4I CCNNNNNNNGG 8 cut(s) 35, 449, 890, 932, 980, 981, 1025, 1303
Bse118I RCCGGY 1 cut(s) 1018
Bse1I ACTGG 1 cut(s) 902
BseAI TCCGGA 1 cut(s) 940
BseBI CCWGG 1 cut(s) 521
BseDI CCNNGG 9 cut(s) 50, 86, 307, 519, 606, 926, 1097, 1290, 1299
BseGI GGATG 2 cut(s) 469, 965
BseLI CCNNNNNNNGG 8 cut(s) 35, 449, 890, 932, 980, 981, 1025, 1303
BseMII CTCAG 1 cut(s) 125
BseNI ACTGG 1 cut(s) 902
BseRI GAGGAG 5 cut(s) 256, 606, 609, 612, 855
BseSI GKGCMC 1 cut(s) 1298
BseYI CCCAGC 1 cut(s) 100
BsgI GTGCAG 3 cut(s) 163, 1076, 1283
Bsh1236I CGCG 2 cut(s) 1301, 1334
Bsh1285I CGRYCG 3 cut(s) 229, 382, 1019
BshFI GGCC 6 cut(s) 131, 406, 678, 901, 1030, 1296
BshNI GGYRCC 2 cut(s) 523, 610
BshTI ACCGGT 1 cut(s) 1018
BsiEI CGRYCG 3 cut(s) 229, 382, 1019
BsiHKAI GWGCWC 2 cut(s) 363, 940
BsiHKCI CYCGRG 2 cut(s) 29, 57
BsiWI CGTACG 2 cut(s) 1176, 1209
BslFI GGGAC 4 cut(s) 31, 40, 498, 581
BslI CCNNNNNNNGG 8 cut(s) 35, 449, 890, 932, 980, 981, 1025, 1303
BsmAI GTCTC 2 cut(s) 200, 1222
BsmFI GGGAC 4 cut(s) 31, 40, 498, 581
BsnI GGCC 6 cut(s) 131, 406, 678, 901, 1030, 1296
Bso31I GGTCTC 1 cut(s) 200
BsoBI CYCGRG 2 cut(s) 29, 57
Bsp120I GGGCCC 1 cut(s) 1294
Bsp1286I GDGCHC 4 cut(s) 363, 443, 940, 1298
Bsp13I TCCGGA 1 cut(s) 940
Bsp19I CCATGG 1 cut(s) 86
BspANI GGCC 6 cut(s) 131, 406, 678, 901, 1030, 1296
BspCNI CTCAG 1 cut(s) 124
BspEI TCCGGA 1 cut(s) 940
BspFNI CGCG 2 cut(s) 1301, 1334
BspPI GGATC 6 cut(s) 154, 492, 698, 706, 711, 1078
BspT107I GGYRCC 2 cut(s) 523, 610
BspTNI GGTCTC 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 1325
BsrFI RCCGGY 1 cut(s) 1018
BsrI ACTGG 1 cut(s) 902
BssAI RCCGGY 1 cut(s) 1018
BssECI CCNNGG 9 cut(s) 50, 86, 307, 519, 606, 926, 1097, 1290, 1299
BssNAI GTATAC 1 cut(s) 1237
BssNI GRCGYC 3 cut(s) 324, 524, 611
BssSI CACGAG 1 cut(s) 371
BssT1I CCWWGG 1 cut(s) 86
Bst1107I GTATAC 1 cut(s) 1237
Bst2BI CACGAG 1 cut(s) 371
Bst2UI CCWGG 1 cut(s) 521
Bst4CI ACNGT 4 cut(s) 54, 392, 449, 1194
Bst6I CTCTTC 1 cut(s) 578
BstACI GRCGYC 3 cut(s) 324, 524, 611
BstAPI GCANNNNNTGC 1 cut(s) 367
BstBAI YACGTR 3 cut(s) 841, 1054, 1168
BstDEI CTNAG 1 cut(s) 111
BstDSI CCRYGG 5 cut(s) 50, 86, 606, 1290, 1299
BstEII GGTNACC 1 cut(s) 1021
BstF5I GGATG 2 cut(s) 469, 965
BstFNI CGCG 2 cut(s) 1301, 1334
BstH2I RGCGCY 2 cut(s) 527, 614
BstHHI GCGC 6 cut(s) 526, 613, 652, 883, 1249, 1334
BstMAI GTCTC 2 cut(s) 200, 1222
BstMCI CGRYCG 3 cut(s) 229, 382, 1019
BstNI CCWGG 1 cut(s) 521
BstPI GGTNACC 1 cut(s) 1021
BstSCI CCNGG 8 cut(s) 307, 519, 925, 973, 1025, 1033, 1083, 1249
BstSFI CTRYAG 2 cut(s) 817, 1240
BstSLI GKGCMC 1 cut(s) 1298
BstSNI TACGTA 1 cut(s) 841
BstUI CGCG 2 cut(s) 1301, 1334
BstV2I GAAGAC 1 cut(s) 321
BstX2I RGATCY 3 cut(s) 159, 703, 1070
BstYI RGATCY 3 cut(s) 159, 703, 1070
BstZ17I GTATAC 1 cut(s) 1237
BsuRI GGCC 6 cut(s) 131, 406, 678, 901, 1030, 1296
BtgI CCRYGG 5 cut(s) 50, 86, 606, 1290, 1299
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 2 cut(s) 469, 965
BtsI GCAGTG 1 cut(s) 993
BtsIMutI CAGTG 2 cut(s) 993, 1389
CfoI GCGC 6 cut(s) 526, 613, 652, 883, 1249, 1334
Cfr10I RCCGGY 1 cut(s) 1018
Cfr13I GGNCC 9 cut(s) 54, 405, 474, 512, 550, 676, 1028, 1294, 1295
Cfr42I CCGCGG 1 cut(s) 1302
CseI GACGC 1 cut(s) 332
CspAI ACCGGT 1 cut(s) 1018
CspCI CAANNNNNGTGG 2 cut(s) 1149, 1184
CviAII CATG 5 cut(s) 87, 139, 364, 415, 580
DdeI CTNAG 1 cut(s) 111
DinI GGCGCC 2 cut(s) 525, 612
DrdI GACNNNNNNGTC 1 cut(s) 806
DseDI GACNNNNNNGTC 1 cut(s) 806
EaeI YGGCCR 1 cut(s) 899
Eam1104I CTCTTC 1 cut(s) 578
EarI CTCTTC 1 cut(s) 578
EciI GGCGGA 3 cut(s) 72, 168, 1326
Ecl136II GAGCTC 1 cut(s) 938
Eco105I TACGTA 1 cut(s) 841
Eco130I CCWWGG 1 cut(s) 86
Eco24I GRGCYC 3 cut(s) 443, 940, 1298
Eco31I GGTCTC 1 cut(s) 200
Eco47I GGWCC 4 cut(s) 54, 474, 512, 550
Eco53kI GAGCTC 1 cut(s) 938
Eco57I CTGAAG 1 cut(s) 1365
Eco72I CACGTG 1 cut(s) 1054
Eco88I CYCGRG 2 cut(s) 29, 57
Eco91I GGTNACC 1 cut(s) 1021
EcoICRI GAGCTC 1 cut(s) 938
EcoO109I RGGNCCY 2 cut(s) 512, 1295
EcoO65I GGTNACC 1 cut(s) 1021
EcoRI GAATTC 1 cut(s) 535
EcoRII CCWGG 1 cut(s) 519
EcoT14I CCWWGG 1 cut(s) 86
EcoT38I GRGCYC 3 cut(s) 443, 940, 1298
EgeI GGCGCC 2 cut(s) 525, 612
EheI GGCGCC 2 cut(s) 525, 612
ErhI CCWWGG 1 cut(s) 86
FaeI CATG 5 cut(s) 90, 142, 367, 418, 583
FaqI GGGAC 4 cut(s) 31, 40, 498, 581
FatI CATG 5 cut(s) 86, 138, 363, 414, 579
FauI CCCGC 6 cut(s) 180, 415, 419, 908, 974, 1306
FblI GTMKAC 2 cut(s) 96, 1236
FokI GGATG 2 cut(s) 476, 952
FriOI GRGCYC 3 cut(s) 443, 940, 1298
FspBI CTAG 2 cut(s) 402, 912
GlaI GCGC 6 cut(s) 525, 612, 651, 882, 1248, 1333
GsaI CCCAGC 1 cut(s) 104
GsuI CTGGAG 1 cut(s) 849
HaeII RGCGCY 2 cut(s) 527, 614
HaeIII GGCC 6 cut(s) 131, 406, 678, 901, 1030, 1296
HgaI GACGC 1 cut(s) 332
HhaI GCGC 6 cut(s) 526, 613, 652, 883, 1249, 1334
Hin1I GRCGYC 3 cut(s) 324, 524, 611
Hin1II CATG 5 cut(s) 90, 142, 367, 418, 583
Hin6I GCGC 6 cut(s) 524, 611, 650, 881, 1247, 1332
HinP1I GCGC 6 cut(s) 524, 611, 650, 881, 1247, 1332
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HindIII AAGCTT 1 cut(s) 1377
HinfI GANTC 3 cut(s) 32, 453, 715
HphI GGTGA 3 cut(s) 215, 724, 883
Hpy166II GTNNAC 4 cut(s) 97, 963, 991, 1237
Hpy188III TCNNGA 7 cut(s) 29, 57, 73, 828, 941, 1040, 1343
Hpy8I GTNNAC 4 cut(s) 97, 963, 991, 1237
HpyAV CCTTC 2 cut(s) 465, 853
HpyCH4III ACNGT 4 cut(s) 54, 392, 449, 1194
HpyCH4IV ACGT 6 cut(s) 195, 285, 840, 1053, 1167, 1175
HpyCH4V TGCA 6 cut(s) 144, 370, 742, 1057, 1199, 1264
HpyF3I CTNAG 1 cut(s) 111
HpySE526I ACGT 6 cut(s) 195, 285, 840, 1053, 1167, 1175
Hsp92I GRCGYC 3 cut(s) 324, 524, 611
Hsp92II CATG 5 cut(s) 90, 142, 367, 418, 583
HspAI GCGC 6 cut(s) 524, 611, 650, 881, 1247, 1332
KasI GGCGCC 2 cut(s) 523, 610
KflI GGGWCCC 1 cut(s) 512
Kpn2I TCCGGA 1 cut(s) 940
KspI CCGCGG 1 cut(s) 1302
LmnI GCTCC 6 cut(s) 358, 634, 868, 935, 943, 1374
LweI GCATC 2 cut(s) 357, 840
MaeI CTAG 2 cut(s) 402, 912
MaeII ACGT 6 cut(s) 195, 285, 840, 1053, 1167, 1175
MaeIII GTNAC 3 cut(s) 337, 871, 1021
MbiI CCGCTC 1 cut(s) 1325
MboII GAAGA 3 cut(s) 326, 565, 859
MfeI CAATTG 1 cut(s) 737
MflI RGATCY 3 cut(s) 159, 703, 1070
MhlI GDGCHC 4 cut(s) 363, 443, 940, 1298
MluCI AATT 6 cut(s) 106, 505, 535, 566, 737, 1077
Mly113I GGCGCC 2 cut(s) 524, 611
MlyI GAGTC 2 cut(s) 41, 724
MmeI TCCRAC 2 cut(s) 441, 790
MroI TCCGGA 1 cut(s) 940
MseI TTAA 2 cut(s) 432, 504
MspA1I CMGCKG 2 cut(s) 890, 1301
MspR9I CCNGG 8 cut(s) 309, 521, 927, 975, 1027, 1035, 1085, 1251
MunI CAATTG 1 cut(s) 737
MvaI CCWGG 1 cut(s) 521
MvnI CGCG 2 cut(s) 1301, 1334
NarI GGCGCC 2 cut(s) 524, 611
NciI CCSGG 7 cut(s) 309, 927, 975, 1027, 1035, 1085, 1251
NcoI CCATGG 1 cut(s) 86
NlaIII CATG 5 cut(s) 90, 142, 367, 418, 583
NmeAIII GCCGAG 1 cut(s) 1122
NmuCI GTSAC 1 cut(s) 871
PcsI WCGNNNNNNNCGW 2 cut(s) 388, 804
PfeI GAWTC 1 cut(s) 453
Pfl23II CGTACG 2 cut(s) 1176, 1209
PflFI GACNNNGTC 1 cut(s) 665
PinAI ACCGGT 1 cut(s) 1018
Ple19I CGATCG 2 cut(s) 229, 382
PleI GAGTC 2 cut(s) 40, 723
PluTI GGCGCC 2 cut(s) 527, 614
PmaCI CACGTG 1 cut(s) 1054
PmlI CACGTG 1 cut(s) 1054
PpsI GAGTC 2 cut(s) 40, 723
Ppu21I YACGTR 3 cut(s) 841, 1054, 1168
PpuMI RGGWCCY 1 cut(s) 512
Psp124BI GAGCTC 1 cut(s) 940
Psp5II RGGWCCY 1 cut(s) 512
Psp6I CCWGG 1 cut(s) 519
PspCI CACGTG 1 cut(s) 1054
PspEI GGTNACC 1 cut(s) 1021
PspFI CCCAGC 1 cut(s) 100
PspGI CCWGG 1 cut(s) 519
PspLI CGTACG 2 cut(s) 1176, 1209
PspOMI GGGCCC 1 cut(s) 1294
PspPI GGNCC 9 cut(s) 54, 405, 474, 512, 550, 676, 1028, 1294, 1295
PspPPI RGGWCCY 1 cut(s) 512
PsuI RGATCY 3 cut(s) 159, 703, 1070
PsyI GACNNNGTC 1 cut(s) 665
PvuI CGATCG 2 cut(s) 229, 382
PvuII CAGCTG 1 cut(s) 890
SacI GAGCTC 1 cut(s) 940
SacII CCGCGG 1 cut(s) 1302
SalI GTCGAC 1 cut(s) 95
SaqAI TTAA 2 cut(s) 432, 504
Sau96I GGNCC 9 cut(s) 54, 405, 474, 512, 550, 676, 1028, 1294, 1295
ScaI AGTACT 2 cut(s) 1046, 1141
SchI GAGTC 2 cut(s) 41, 724
ScrFI CCNGG 8 cut(s) 309, 521, 927, 975, 1027, 1035, 1085, 1251
SduI GDGCHC 4 cut(s) 363, 443, 940, 1298
SfaNI GCATC 2 cut(s) 357, 840
SfcI CTRYAG 2 cut(s) 817, 1240
SfoI GGCGCC 2 cut(s) 525, 612
Sfr303I CCGCGG 1 cut(s) 1302
SgrBI CCGCGG 1 cut(s) 1302
SinI GGWCC 4 cut(s) 54, 474, 512, 550
SmlI CTYRAG 1 cut(s) 1374
SmoI CTYRAG 1 cut(s) 1374
SnaBI TACGTA 1 cut(s) 841
Sse9I AATT 6 cut(s) 106, 505, 535, 566, 737, 1077
SspDI GGCGCC 2 cut(s) 523, 610
SspMI CTAG 2 cut(s) 402, 912
SstI GAGCTC 1 cut(s) 940
StyD4I CCNGG 8 cut(s) 307, 519, 925, 973, 1025, 1033, 1083, 1249
StyI CCWWGG 1 cut(s) 86
TaaI ACNGT 4 cut(s) 54, 392, 449, 1194
TaiI ACGT 6 cut(s) 198, 288, 843, 1056, 1170, 1178
TaqI TCGA 5 cut(s) 72, 96, 225, 321, 495
TasI AATT 6 cut(s) 106, 505, 535, 566, 737, 1077
TatI WGTACW 2 cut(s) 1044, 1139
TauI GCSGC 8 cut(s) 248, 655, 658, 825, 886, 1159, 1304, 1328
TfiI GAWTC 1 cut(s) 453
Tru1I TTAA 2 cut(s) 432, 504
Tru9I TTAA 2 cut(s) 432, 504
TscAI CASTG 2 cut(s) 993, 1389
TseFI GTSAC 1 cut(s) 871
Tsp45I GTSAC 1 cut(s) 871
TspDTI ATGAA 1 cut(s) 127
TspGWI ACGGA 2 cut(s) 211, 325
TspRI CASTG 2 cut(s) 993, 1389
Tth111I GACNNNGTC 1 cut(s) 665
VpaK11BI GGWCC 4 cut(s) 54, 474, 512, 550
XapI RAATTY 3 cut(s) 535, 566, 1077
XcmI CCANNNNNNNNNTGG 1 cut(s) 894
XmiI GTMKAC 2 cut(s) 96, 1236
XspI CTAG 2 cut(s) 402, 912
ZrmI AGTACT 2 cut(s) 1046, 1141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.