Rh6AG167900

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0002525
Physical Location & Seq
Forward (+)
26858802 .. 26861021
2220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG167900.1

Sequence Viewer

Length: 1446 bp
ATGGAGAACAGCTACTCCTACAACTCGTATCCGGACTCCGGCGGCTCGTCGCCGCGGTCGCGTGAGATCGACTTCGAGAACCCGCCGCCGTGGGAGGACCAGCAGAACCCGAACTACAAGGTCAAGTTCATGTGCAGCTACGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTTACCTACACTGGCGGCGAGACCAAGATCCTCGCCGTCGAGCGCACCATCAAGTTCTCCGTCCTCGTCGCCAGGCTCTCCGCCCTCTCCGACAGCGAGGTGTCGTTCAAGTACCAGCTCCCCGGGGAAGACCTCGACGCCTTGATCTCCGTCAGCAACGACGACGACCTCGAGCACATGATGCACGAGTACGATCGCCTCTACCGGGCCTCCGCCAGGCCCGCCAGGATGAGGCTGTTTCTCTTCCCAGTCAATCACAGCGACAGTTTCGGCTCTGACAGGTCCTCCGATAGGGATCGCTTCGTCGAGGCTTTGAATTCCGGTCCAATTCCCGCGCCCGACCCGATTTCCAAGCCTCCCGTTGTCGTCCAAAATAACGTTGACTTCATCCCCGGTTGGGGCAAGGCCGCCGTTGCGGTGACGCCGCCTCCTCCGCCGGCGCAGCCTACGGTGCCCGAGCTCGTTGCGCCTCCGCCGGAGTTTCAAGTCAGATCAGGCCTCGGCGGCGACCGGGTCATCGGGTCGGATCCGGTAGTGAACCCGGTGGAGTTCCATAGGCAACTGCAGGAATTGCAGAGGCTGCAAATTGGAGATCAACCTGATCAACAGTACCGAAGAAAGAGCGATGACAACCTCGTTGGAGCAGGAGGAGGAGGCTACGGTGCCGCCGCCGGTGATTACTACATGCAGAAGGTGCCGGAAAAGCTTCCTCAGGTGACGATGCCTCAGCAGATTTCGGCTCCGGCGGGTTACTGGCCGGAGAAGCATGTAGCGAGCGGCGGATTTCCGGGGACGGTGACGGGAGCACCTGAACAGCAACAGCCTATGTACATGATCAGCGCAGGCGGAGGCGGTATGTATCACGCGCCGCCGATGGTGCGACCGGTGACTGCCCCAACCAATCAAGGGTACTACCACATGCCGCCGCAGCAGCAGCAGCAGCAACAGAGAATGGCTTCGGACGTTTACCGGGATCAGCCGGTGTACAGTGCTATACCGCAGCCACAGCAACAGACGAGTAGTCTACCGCCACAGCCGCCCAAGTACGTGGCGACGTACGCCGAAACGGCGCCGTATACTCAGGTGGCGTATGATAGCGCAACGGGGAGGCAGGTGTACTATACTGCGCAGGGTGGAGGGGTTGTGCAGCCACAGCAGGCTTACTCAGCAGTGGGGCCCGCTGCGGTTAGCGGCGAAATGCGAGTGGCGGGCGGGTTGAGCGCGGAGGGTAAGGTGGTGGGTTCAAAGCTTCCCCAAACTTCCGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

481

Amino Acids

52.36

Weight (kDa)

5.46

Isoelectric Point (pI)

53.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 56 - 142 5.6e-17 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1279
Acc16I TGCGCA 1 cut(s) 1305
Acc36I ACCTGC 1 cut(s) 1279
AccB1I GGYRCC 4 cut(s) 628, 839, 871, 1246
AccBSI CCGCTC 1 cut(s) 954
AccI GTMKAC 2 cut(s) 1201, 1253
AccII CGCG 6 cut(s) 55, 61, 512, 1043, 1400, 1442
AccIII TCCGGA 1 cut(s) 31
AclI AACGTT 1 cut(s) 555
AclWI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1158
AcoI YGGCCR 1 cut(s) 932
AcsI RAATTY 1 cut(s) 493
AcyI GRCGYC 3 cut(s) 315, 599, 1247
AfaI GTAC 9 cut(s) 290, 368, 788, 1007, 1088, 1163, 1223, 1235, 1295
AfiI CCNNNNNNNGG 8 cut(s) 38, 382, 393, 408, 468, 574, 575, 1083
AgeI ACCGGT 1 cut(s) 1060
AgsI TTSAA 4 cut(s) 286, 493, 662, 1422
AhdI GACNNNNNGTC 1 cut(s) 1197
AjnI CCWGG 3 cut(s) 248, 392, 401
AloI GAACNNNNNNTCC 1 cut(s) 31
AluBI AGCT 7 cut(s) 12, 138, 178, 295, 637, 883, 1426
AluI AGCT 7 cut(s) 12, 138, 178, 295, 637, 883, 1426
Alw21I GWGCWC 3 cut(s) 354, 639, 985
Alw26I GTCTC 1 cut(s) 191
AlwI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1158
AlwNI CAGNNNCTG 1 cut(s) 757
Ama87I CYCGRG 3 cut(s) 299, 347, 632
Aor13HI TCCGGA 1 cut(s) 31
AoxI GGCC 6 cut(s) 384, 395, 582, 673, 932, 1352
ApaI GGGCCC 1 cut(s) 1356
ApoI RAATTY 1 cut(s) 493
AsiGI ACCGGT 1 cut(s) 1060
Asp700I GAANNNNTTC 2 cut(s) 882, 1132
AspS9I GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1352, 1353
AsuC2I CCSGG 8 cut(s) 300, 301, 383, 570, 689, 719, 966, 1148
AsuHPI GGTGA 5 cut(s) 607, 863, 904, 985, 1075
AvaI CYCGRG 3 cut(s) 299, 347, 632
AvaII GGWCC 3 cut(s) 97, 459, 500
AxyI CCTNAGG 1 cut(s) 888
BaeGI GKGCMC 2 cut(s) 633, 1356
BamHI GGATCC 1 cut(s) 703
BanI GGYRCC 4 cut(s) 628, 839, 871, 1246
BanII GRGCYC 2 cut(s) 639, 1356
BauI CACGAG 1 cut(s) 362
BbsI GAAGAC 1 cut(s) 312
Bbv12I GWGCWC 3 cut(s) 354, 639, 985
BbvCI CCTCAGC 1 cut(s) 903
BccI CCATC 2 cut(s) 233, 1045
BceAI ACGGC 6 cut(s) 73, 157, 197, 572, 1234, 1260
BcgI CGANNNNNNTGC 2 cut(s) 623, 657
BciT130I CCWGG 3 cut(s) 250, 394, 403
BciVI GTATCC 1 cut(s) 39
BclI TGATCA 2 cut(s) 778, 1011
BcnI CCSGG 8 cut(s) 300, 301, 383, 570, 689, 719, 966, 1148
BcoDI GTCTC 1 cut(s) 191
BfmI CTRYAG 1 cut(s) 740
BfoI RGCGCY 1 cut(s) 1250
BfuAI ACCTGC 1 cut(s) 1279
BfuI GTATCC 1 cut(s) 39
BglI GCCNNNNNGGC 2 cut(s) 681, 1244
Bme18I GGWCC 3 cut(s) 97, 459, 500
BmeRI GACNNNNNGTC 1 cut(s) 1197
BmeT110I CYCGRG 3 cut(s) 299, 347, 632
BmgT120I GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1352, 1353
BmiI GGNNCC 8 cut(s) 630, 705, 841, 873, 918, 1248, 1353, 1354
BmrI ACTGGG 1 cut(s) 419
BmsI GCATC 2 cut(s) 348, 888
BmuI ACTGGG 1 cut(s) 419
BpiI GAAGAC 1 cut(s) 312
Bpu10I CCTNAGC 1 cut(s) 903
BpuMI CCSGG 8 cut(s) 300, 301, 383, 570, 689, 719, 966, 1148
BsaAI YACGTR 1 cut(s) 1225
BsaBI GATNNNNATC 1 cut(s) 471
BsaHI GRCGYC 3 cut(s) 315, 599, 1247
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 8 cut(s) 53, 89, 298, 299, 300, 568, 676, 965
BsaWI WCCGGW 4 cut(s) 31, 497, 706, 1060
BsaXI ACNNNNNCTCC 9 cut(s) 29, 371, 401, 446, 476, 589, 619, 1305, 1335
Bsc4I CCNNNNNNNGG 8 cut(s) 38, 382, 393, 408, 468, 574, 575, 1083
Bse118I RCCGGY 4 cut(s) 613, 848, 1060, 1156
Bse1I ACTGG 3 cut(s) 193, 425, 935
Bse21I CCTNAGG 1 cut(s) 888
Bse8I GATNNNNATC 1 cut(s) 471
BseAI TCCGGA 1 cut(s) 31
BseBI CCWGG 3 cut(s) 250, 394, 403
BseDI CCNNGG 8 cut(s) 53, 89, 298, 299, 300, 568, 676, 965
BseGI GGATG 2 cut(s) 411, 564
BseJI GATNNNNATC 1 cut(s) 471
BseLI CCNNNNNNNGG 8 cut(s) 38, 382, 393, 408, 468, 574, 575, 1083
BseMII CTCAG 4 cut(s) 902, 917, 1271, 1356
BseNI ACTGG 3 cut(s) 193, 425, 935
BseRI GAGGAG 3 cut(s) 597, 840, 843
BseSI GKGCMC 2 cut(s) 633, 1356
BsgI GTGCAG 2 cut(s) 154, 1343
Bsh1236I CGCG 6 cut(s) 55, 61, 512, 1043, 1400, 1442
Bsh1285I CGRYCG 4 cut(s) 59, 373, 688, 1061
BshFI GGCC 6 cut(s) 386, 397, 584, 675, 934, 1354
BshNI GGYRCC 4 cut(s) 628, 839, 871, 1246
BshTI ACCGGT 1 cut(s) 1060
BsiEI CGRYCG 4 cut(s) 59, 373, 688, 1061
BsiHKAI GWGCWC 3 cut(s) 354, 639, 985
BsiHKCI CYCGRG 3 cut(s) 299, 347, 632
BsiWI CGTACG 1 cut(s) 1233
BslFI GGGAC 1 cut(s) 982
BslI CCNNNNNNNGG 8 cut(s) 38, 382, 393, 408, 468, 574, 575, 1083
BsmAI GTCTC 1 cut(s) 191
BsmFI GGGAC 1 cut(s) 982
BsnI GGCC 6 cut(s) 386, 397, 584, 675, 934, 1354
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 3 cut(s) 299, 347, 632
Bsp120I GGGCCC 1 cut(s) 1352
Bsp1286I GDGCHC 5 cut(s) 354, 633, 639, 985, 1356
Bsp13I TCCGGA 1 cut(s) 31
Bsp1407I TGTACA 2 cut(s) 1005, 1161
BspANI GGCC 6 cut(s) 386, 397, 584, 675, 934, 1354
BspCNI CTCAG 4 cut(s) 901, 916, 1270, 1355
BspEI TCCGGA 1 cut(s) 31
BspFNI CGCG 6 cut(s) 55, 61, 512, 1043, 1400, 1442
BspLI GGNNCC 8 cut(s) 630, 705, 841, 873, 918, 1248, 1353, 1354
BspMAI CTGCAG 1 cut(s) 744
BspMI ACCTGC 1 cut(s) 1279
BspPI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1158
BspT107I GGYRCC 4 cut(s) 628, 839, 871, 1246
BspTNI GGTCTC 1 cut(s) 191
BsrBI CCGCTC 1 cut(s) 954
BsrFI RCCGGY 4 cut(s) 613, 848, 1060, 1156
BsrGI TGTACA 2 cut(s) 1005, 1161
BsrI ACTGG 3 cut(s) 193, 425, 935
BssAI RCCGGY 4 cut(s) 613, 848, 1060, 1156
BssECI CCNNGG 8 cut(s) 53, 89, 298, 299, 300, 568, 676, 965
BssNAI GTATAC 1 cut(s) 1254
BssNI GRCGYC 3 cut(s) 315, 599, 1247
BssSI CACGAG 1 cut(s) 362
Bst1107I GTATAC 1 cut(s) 1254
Bst2BI CACGAG 1 cut(s) 362
Bst2UI CCWGG 3 cut(s) 250, 394, 403
Bst4CI ACNGT 6 cut(s) 443, 628, 786, 839, 973, 1166
Bst6I CTCTTC 1 cut(s) 425
BstACI GRCGYC 3 cut(s) 315, 599, 1247
BstAPI GCANNNNNTGC 4 cut(s) 358, 748, 757, 871
BstAUI TGTACA 2 cut(s) 1005, 1161
BstBAI YACGTR 1 cut(s) 1225
BstC8I GCNNGC 7 cut(s) 399, 615, 952, 1021, 1335, 1356, 1387
BstDEI CTNAG 4 cut(s) 888, 903, 1257, 1342
BstDSI CCRYGG 2 cut(s) 53, 89
BstENI CCTNNNNNAGG 2 cut(s) 391, 466
BstF5I GGATG 2 cut(s) 411, 564
BstFNI CGCG 6 cut(s) 55, 61, 512, 1043, 1400, 1442
BstH2I RGCGCY 1 cut(s) 1250
BstMAI GTCTC 1 cut(s) 191
BstMCI CGRYCG 4 cut(s) 59, 373, 688, 1061
BstNI CCWGG 3 cut(s) 250, 394, 403
BstNSI RCATGY 3 cut(s) 865, 947, 1099
BstSFI CTRYAG 1 cut(s) 740
BstSLI GKGCMC 2 cut(s) 633, 1356
BstUI CGCG 6 cut(s) 55, 61, 512, 1043, 1400, 1442
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 3 cut(s) 150, 204, 703
BstXI CCANNNNNNTGG 1 cut(s) 1225
BstYI RGATCY 3 cut(s) 150, 204, 703
BstZ17I GTATAC 1 cut(s) 1254
Bsu36I CCTNAGG 1 cut(s) 888
BsuI GTATCC 1 cut(s) 39
BsuRI GGCC 6 cut(s) 386, 397, 584, 675, 934, 1354
BtgI CCRYGG 2 cut(s) 53, 89
BtgZI GCGATG 1 cut(s) 816
BtsCI GGATG 2 cut(s) 411, 564
BtsI GCAGTG 1 cut(s) 1353
BtsIMutI CAGTG 3 cut(s) 186, 1171, 1353
BveI ACCTGC 1 cut(s) 1279
Cac8I GCNNGC 7 cut(s) 399, 615, 952, 1021, 1335, 1356, 1387
CaiI CAGNNNCTG 1 cut(s) 757
Cfr10I RCCGGY 4 cut(s) 613, 848, 1060, 1156
Cfr13I GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1352, 1353
Cfr42I CCGCGG 1 cut(s) 56
Cfr9I CCCGGG 1 cut(s) 299
CseI GACGC 2 cut(s) 323, 607
Csp6I GTAC 9 cut(s) 289, 367, 787, 1006, 1087, 1162, 1222, 1234, 1294
CspAI ACCGGT 1 cut(s) 1060
CviAII CATG 6 cut(s) 130, 355, 862, 944, 1009, 1096
CviQI GTAC 9 cut(s) 289, 367, 787, 1006, 1087, 1162, 1222, 1234, 1294
DdeI CTNAG 4 cut(s) 888, 903, 1257, 1342
DinI GGCGCC 1 cut(s) 1248
DriI GACNNNNNGTC 1 cut(s) 1197
EaeI YGGCCR 1 cut(s) 932
Eam1104I CTCTTC 1 cut(s) 425
Eam1105I GACNNNNNGTC 1 cut(s) 1197
EarI CTCTTC 1 cut(s) 425
EciI GGCGGA 6 cut(s) 247, 379, 600, 639, 972, 1038
Ecl136II GAGCTC 1 cut(s) 637
Eco147I AGGCCT 1 cut(s) 675
Eco24I GRGCYC 2 cut(s) 639, 1356
Eco31I GGTCTC 1 cut(s) 191
Eco47I GGWCC 3 cut(s) 97, 459, 500
Eco53kI GAGCTC 1 cut(s) 637
Eco81I CCTNAGG 1 cut(s) 888
Eco88I CYCGRG 3 cut(s) 299, 347, 632
EcoICRI GAGCTC 1 cut(s) 637
EcoNI CCTNNNNNAGG 2 cut(s) 391, 466
EcoO109I RGGNCCY 2 cut(s) 459, 1352
EcoRI GAATTC 1 cut(s) 493
EcoRII CCWGG 3 cut(s) 248, 392, 401
EcoT38I GRGCYC 2 cut(s) 639, 1356
EgeI GGCGCC 1 cut(s) 1248
EheI GGCGCC 1 cut(s) 1248
FaeI CATG 6 cut(s) 133, 358, 865, 947, 1012, 1099
FaqI GGGAC 1 cut(s) 982
FatI CATG 6 cut(s) 129, 354, 861, 943, 1008, 1095
FauI CCCGC 8 cut(s) 90, 167, 406, 517, 916, 1363, 1378, 1382
FbaI TGATCA 2 cut(s) 778, 1011
FblI GTMKAC 2 cut(s) 1201, 1253
FokI GGATG 2 cut(s) 418, 551
FriOI GRGCYC 2 cut(s) 639, 1356
FspI TGCGCA 1 cut(s) 1305
HaeII RGCGCY 1 cut(s) 1250
HaeIII GGCC 6 cut(s) 386, 397, 584, 675, 934, 1354
HgaI GACGC 2 cut(s) 323, 607
Hin1I GRCGYC 3 cut(s) 315, 599, 1247
Hin1II CATG 6 cut(s) 133, 358, 865, 947, 1012, 1099
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HindIII AAGCTT 2 cut(s) 881, 1424
HinfI GANTC 1 cut(s) 35
HphI GGTGA 5 cut(s) 607, 863, 904, 985, 1075
Hpy166II GTNNAC 7 cut(s) 559, 715, 1144, 1162, 1202, 1254, 1294
Hpy188I TCNGA 6 cut(s) 268, 454, 466, 668, 703, 1138
Hpy188III TCNNGA 2 cut(s) 32, 76
Hpy8I GTNNAC 7 cut(s) 559, 715, 1144, 1162, 1202, 1254, 1294
Hpy99I CGWCG 8 cut(s) 52, 218, 248, 317, 341, 344, 485, 1234
HpyAV CCTTC 1 cut(s) 862
HpyCH4III ACNGT 6 cut(s) 443, 628, 786, 839, 973, 1166
HpyCH4IV ACGT 4 cut(s) 555, 1140, 1224, 1232
HpyCH4V TGCA 7 cut(s) 135, 361, 742, 751, 760, 865, 1324
HpyF3I CTNAG 4 cut(s) 888, 903, 1257, 1342
HpySE526I ACGT 4 cut(s) 555, 1140, 1224, 1232
Hsp92I GRCGYC 3 cut(s) 315, 599, 1247
Hsp92II CATG 6 cut(s) 133, 358, 865, 947, 1012, 1099
KasI GGCGCC 1 cut(s) 1246
Kpn2I TCCGGA 1 cut(s) 31
KroI GCCGGC 1 cut(s) 613
KroNI GCCGGC 1 cut(s) 615
Ksp22I TGATCA 2 cut(s) 778, 1011
KspI CCGCGG 1 cut(s) 56
LmnI GCTCC 4 cut(s) 300, 818, 922, 980
LweI GCATC 2 cut(s) 348, 888
MaeII ACGT 4 cut(s) 555, 1140, 1224, 1232
MaeIII GTNAC 5 cut(s) 595, 892, 926, 973, 1063
MbiI CCGCTC 1 cut(s) 954
MboII GAAGA 3 cut(s) 317, 412, 804
MflI RGATCY 3 cut(s) 150, 204, 703
MhlI GDGCHC 5 cut(s) 354, 633, 639, 985, 1356
MluCI AATT 4 cut(s) 493, 504, 746, 762
Mly113I GGCGCC 1 cut(s) 1247
MlyI GAGTC 1 cut(s) 29
MmeI TCCRAC 3 cut(s) 291, 681, 796
MreI CGCCGGCG 1 cut(s) 613
MroI TCCGGA 1 cut(s) 31
MroNI GCCGGC 1 cut(s) 613
MroXI GAANNNNTTC 2 cut(s) 882, 1132
MspA1I CMGCKG 2 cut(s) 55, 1358
MvaI CCWGG 3 cut(s) 250, 394, 403
MvnI CGCG 6 cut(s) 55, 61, 512, 1043, 1400, 1442
NaeI GCCGGC 1 cut(s) 615
NarI GGCGCC 1 cut(s) 1247
NciI CCSGG 8 cut(s) 300, 301, 383, 570, 689, 719, 966, 1148
NgoMIV GCCGGC 1 cut(s) 613
NlaIII CATG 6 cut(s) 133, 358, 865, 947, 1012, 1099
NlaIV GGNNCC 8 cut(s) 630, 705, 841, 873, 918, 1248, 1353, 1354
NmeAIII GCCGAG 1 cut(s) 657
NmuCI GTSAC 4 cut(s) 595, 892, 973, 1063
NsbI TGCGCA 1 cut(s) 1305
NspI RCATGY 3 cut(s) 865, 947, 1099
PaeR7I CTCGAG 1 cut(s) 347
PaqCI CACCTGC 1 cut(s) 1279
PceI AGGCCT 1 cut(s) 675
PcsI WCGNNNNNNNCGW 1 cut(s) 345
PdiI GCCGGC 1 cut(s) 615
PdmI GAANNNNTTC 2 cut(s) 882, 1132
Pfl23II CGTACG 1 cut(s) 1233
PflFI GACNNNGTC 1 cut(s) 689
PinAI ACCGGT 1 cut(s) 1060
Ple19I CGATCG 1 cut(s) 373
PleI GAGTC 1 cut(s) 29
PluTI GGCGCC 1 cut(s) 1250
PpsI GAGTC 1 cut(s) 29
Ppu21I YACGTR 1 cut(s) 1225
PpuMI RGGWCCY 1 cut(s) 459
Psp124BI GAGCTC 1 cut(s) 639
Psp1406I AACGTT 1 cut(s) 555
Psp5II RGGWCCY 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 248, 392, 401
PspGI CCWGG 3 cut(s) 248, 392, 401
PspLI CGTACG 1 cut(s) 1233
PspN4I GGNNCC 8 cut(s) 630, 705, 841, 873, 918, 1248, 1353, 1354
PspOMI GGGCCC 1 cut(s) 1352
PspPI GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1352, 1353
PspPPI RGGWCCY 1 cut(s) 459
PspXI VCTCGAGB 1 cut(s) 347
PsrI GAACNNNNNNTAC 2 cut(s) 98, 130
PstI CTGCAG 1 cut(s) 744
PstNI CAGNNNCTG 1 cut(s) 757
PsuI RGATCY 3 cut(s) 150, 204, 703
PsyI GACNNNGTC 1 cut(s) 689
PvuI CGATCG 1 cut(s) 373
RsaI GTAC 9 cut(s) 290, 368, 788, 1007, 1088, 1163, 1223, 1235, 1295
RsaNI GTAC 9 cut(s) 289, 367, 787, 1006, 1087, 1162, 1222, 1234, 1294
SacI GAGCTC 1 cut(s) 639
SacII CCGCGG 1 cut(s) 56
Sau96I GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1352, 1353
SchI GAGTC 1 cut(s) 29
SduI GDGCHC 5 cut(s) 354, 633, 639, 985, 1356
SfaNI GCATC 2 cut(s) 348, 888
SfcI CTRYAG 1 cut(s) 740
SfoI GGCGCC 1 cut(s) 1248
Sfr274I CTCGAG 1 cut(s) 347
Sfr303I CCGCGG 1 cut(s) 56
SgrAI CRCCGGYG 2 cut(s) 613, 848
SgrBI CCGCGG 1 cut(s) 56
SinI GGWCC 3 cut(s) 97, 459, 500
SlaI CTCGAG 1 cut(s) 347
SmaI CCCGGG 1 cut(s) 301
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
Sse9I AATT 4 cut(s) 493, 504, 746, 762
SseBI AGGCCT 1 cut(s) 675
SspDI GGCGCC 1 cut(s) 1246
SstI GAGCTC 1 cut(s) 639
StuI AGGCCT 1 cut(s) 675
TaaI ACNGT 6 cut(s) 443, 628, 786, 839, 973, 1166
TaiI ACGT 4 cut(s) 558, 1143, 1227, 1235
TaqI TCGA 6 cut(s) 69, 75, 216, 312, 348, 483
TasI AATT 4 cut(s) 493, 504, 746, 762
TatI WGTACW 3 cut(s) 1005, 1161, 1293
TscAI CASTG 3 cut(s) 193, 1171, 1353
TseFI GTSAC 4 cut(s) 595, 892, 973, 1063
Tsp45I GTSAC 4 cut(s) 595, 892, 973, 1063
TspDTI ATGAA 2 cut(s) 118, 553
TspGWI ACGGA 2 cut(s) 226, 316
TspMI CCCGGG 1 cut(s) 299
TspRI CASTG 3 cut(s) 193, 1171, 1353
Tth111I GACNNNGTC 1 cut(s) 689
VpaK11BI GGWCC 3 cut(s) 97, 459, 500
XagI CCTNNNNNAGG 2 cut(s) 391, 466
XapI RAATTY 1 cut(s) 493
XceI RCATGY 3 cut(s) 865, 947, 1099
XhoI CTCGAG 1 cut(s) 347
XmaI CCCGGG 1 cut(s) 299
XmiI GTMKAC 2 cut(s) 1201, 1253
XmnI GAANNNNTTC 2 cut(s) 882, 1132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.