Rh6BG173400

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0002525
Physical Location & Seq
Forward (+)
28596053 .. 28598301
2249 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG173400.1

Sequence Viewer

Length: 1449 bp
ATGGAGAACAGCTACTCCTACAACTCCTATCCGGACTCCGGCGGCTCGTCGCCGCGGTCGCGTGAGATCGACTTCGAGAACCCGCCGCCGTGGGAGGACCAGCAGAACCCGAACTACAAGGTCAAGTTCATGTGCAGCTACGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCACCTACACCGGCGGCGAGACCAAGATCCTCGCCGCCGAACGCACCATCAAGTTCTCCGTCCTCGTCGCCAGGCTCTCCGCCCTCTCCGACAGCGACGTGTCGTTCAAGTACCAGCTCCCCGGGGAAGACCTCGACGCCTTGATCTCCGTCACCAACGACGACGACCTCGAGCACATGATGCACGAGTACGATCGCCTCTACCGGGCCTCCGCCAGGCCCGCCAGGATGAGGCTGTTTCTCTTCCCGGTCAATCACAGCGACAGTTTCGGCTCTGACAGGTCCTCCGATAGGGATCGCTTCGTCGAGGCGTTGAATTCCGGTCCAATTCCCGCGCCCGACCCGATTTCCAAGCCTCCCGTCGTCGTCCAAAATAACGTTGACTTCATCCCCGGTTGGGGCAAGGCCGCCGTTGCGGTAACGCCGCCTCCTCCGCCGGCGCAGCCTACGGTGCCCGAGCTCGTTGCTCCTCCGCCGGAGTTTCAAGTCAGATCAGGCCTCTGCGGCGACCGGGTCATCGGGTCGGATCCGGTAGTGAACCCGGTGGAGTTCCAGAGGCAACTGCAGGACTTGCAGAGGCTGCAAATTGGAGATCAATCTGATCAACAGTACCGAAGAAAGAGCGATGACAACCTCGTCGGAGCAGGAGGAGGAGGCTACGGTGCCGCCGCCGGTGATTATTACATGCAGAAGGTGCCGGAAAAGCTTCCTCCGGTGACGATGCCTCAGCAGATTTCGGCTCCGGCGGGTTACTGGCCGGAGAAGCATGTAGCGAGCGGCGGATTTCCGGGGACGGTGACGGGAGCACCTGAACAGCAACAGCCTATGTACATGATCAGCGCAGGCGGAGGCGGTGTGTATCACGCGCCGCCGATGGTGCGACCGGTGACTGCCCCAACCAATCAAGGGTACTATCACATGCAGCAGCCTCCGCAGCAGCAGCAGCAACAGAGAATGGCTTCGGACGTTTACCGGGATCAGCCGGTGTACAGTGCTATACCGCAGCCACAGCAACAGACGAGTAGTCTACCGCCACAGCCGCCCAAGTACGTGGCGACGTACGCCGAAACGGCGCCGTATACTCAGGTGGCGTATGATAGCGCAACGGGGAGGCAGGTGTACTATACTGCGCAGGGTGGAGGGGTTGTGCAGCCGCAGCAGGCGTATTCAGCAGTGGGGCCCGCTGCGGTTAGCGGCGAAATGCGAGTGGTGGGCGGGTTGAGCCCGGAGGGTAAGGTGGTGGGTTCAAAACTTCCGCAAACTTCCGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

482

Amino Acids

52.46

Weight (kDa)

5.37

Isoelectric Point (pI)

53.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 56 - 142 8.1e-17 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1282
AasI GACNNNNNNGTC 1 cut(s) 812
Acc16I TGCGCA 1 cut(s) 1308
Acc36I ACCTGC 1 cut(s) 1282
AccB1I GGYRCC 4 cut(s) 628, 839, 871, 1249
AccBSI CCGCTC 1 cut(s) 954
AccI GTMKAC 2 cut(s) 1204, 1256
AccII CGCG 5 cut(s) 55, 61, 512, 1043, 1445
AccIII TCCGGA 1 cut(s) 31
AclI AACGTT 1 cut(s) 555
AclWI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1161
AcoI YGGCCR 1 cut(s) 932
AcsI RAATTY 1 cut(s) 493
AcyI GRCGYC 2 cut(s) 315, 1250
AfaI GTAC 9 cut(s) 290, 368, 788, 1007, 1088, 1166, 1226, 1238, 1298
AfiI CCNNNNNNNGG 8 cut(s) 38, 382, 393, 408, 468, 574, 575, 1083
AflIII ACRYGT 1 cut(s) 276
AgeI ACCGGT 1 cut(s) 1060
AgsI TTSAA 4 cut(s) 286, 493, 662, 1425
AhdI GACNNNNNGTC 1 cut(s) 1200
AjiI CACGTC 1 cut(s) 277
AjnI CCWGG 3 cut(s) 248, 392, 401
AloI GAACNNNNNNTCC 1 cut(s) 31
AluBI AGCT 6 cut(s) 12, 138, 178, 295, 637, 883
AluI AGCT 6 cut(s) 12, 138, 178, 295, 637, 883
Alw21I GWGCWC 3 cut(s) 354, 639, 985
Alw26I GTCTC 1 cut(s) 191
AlwI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1161
AlwNI CAGNNNCTG 1 cut(s) 757
Ama87I CYCGRG 3 cut(s) 299, 347, 632
Aor13HI TCCGGA 1 cut(s) 31
AoxI GGCC 6 cut(s) 384, 395, 582, 673, 932, 1355
ApaI GGGCCC 1 cut(s) 1359
ApoI RAATTY 1 cut(s) 493
AsiGI ACCGGT 1 cut(s) 1060
Asp700I GAANNNNTTC 2 cut(s) 882, 1135
AspLEI GCGC 7 cut(s) 514, 619, 1019, 1045, 1252, 1280, 1309
AspS9I GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1355, 1356
AsuHPI GGTGA 6 cut(s) 172, 322, 863, 904, 985, 1075
AvaI CYCGRG 3 cut(s) 299, 347, 632
AvaII GGWCC 3 cut(s) 97, 459, 500
BaeGI GKGCMC 2 cut(s) 633, 1359
BamHI GGATCC 1 cut(s) 703
BanI GGYRCC 4 cut(s) 628, 839, 871, 1249
BanII GRGCYC 3 cut(s) 639, 1359, 1403
BauI CACGAG 1 cut(s) 362
BbsI GAAGAC 1 cut(s) 312
Bbv12I GWGCWC 3 cut(s) 354, 639, 985
BbvCI CCTCAGC 1 cut(s) 903
BccI CCATC 2 cut(s) 233, 1045
BceAI ACGGC 5 cut(s) 73, 157, 572, 1237, 1263
BcgI CGANNNNNNTGC 2 cut(s) 623, 657
BciT130I CCWGG 3 cut(s) 250, 394, 403
BclI TGATCA 2 cut(s) 778, 1011
BcoDI GTCTC 1 cut(s) 191
BfmI CTRYAG 1 cut(s) 740
BfoI RGCGCY 1 cut(s) 1253
BfuAI ACCTGC 1 cut(s) 1282
BglI GCCNNNNNGGC 2 cut(s) 681, 1247
Bme18I GGWCC 3 cut(s) 97, 459, 500
BmeRI GACNNNNNGTC 1 cut(s) 1200
BmeT110I CYCGRG 3 cut(s) 299, 347, 632
BmgBI CACGTC 1 cut(s) 277
BmgT120I GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1355, 1356
BmiI GGNNCC 8 cut(s) 630, 705, 841, 873, 918, 1251, 1356, 1357
BmsI GCATC 2 cut(s) 348, 888
BpiI GAAGAC 1 cut(s) 312
Bpu10I CCTNAGC 1 cut(s) 903
BsaAI YACGTR 1 cut(s) 1228
BsaBI GATNNNNATC 1 cut(s) 471
BsaHI GRCGYC 2 cut(s) 315, 1250
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 7 cut(s) 53, 89, 298, 299, 300, 568, 965
BsaWI WCCGGW 5 cut(s) 31, 497, 706, 889, 1060
Bsc4I CCNNNNNNNGG 8 cut(s) 38, 382, 393, 408, 468, 574, 575, 1083
Bse118I RCCGGY 5 cut(s) 188, 613, 848, 1060, 1159
Bse1I ACTGG 1 cut(s) 935
Bse8I GATNNNNATC 1 cut(s) 471
BseAI TCCGGA 1 cut(s) 31
BseBI CCWGG 3 cut(s) 250, 394, 403
BseDI CCNNGG 7 cut(s) 53, 89, 298, 299, 300, 568, 965
BseGI GGATG 2 cut(s) 411, 564
BseJI GATNNNNATC 1 cut(s) 471
BseLI CCNNNNNNNGG 8 cut(s) 38, 382, 393, 408, 468, 574, 575, 1083
BseMII CTCAG 2 cut(s) 917, 1274
BseNI ACTGG 1 cut(s) 935
BseRI GAGGAG 4 cut(s) 597, 636, 840, 843
BseSI GKGCMC 2 cut(s) 633, 1359
BsgI GTGCAG 2 cut(s) 154, 1346
Bsh1236I CGCG 5 cut(s) 55, 61, 512, 1043, 1445
Bsh1285I CGRYCG 4 cut(s) 59, 373, 688, 1061
BshFI GGCC 6 cut(s) 386, 397, 584, 675, 934, 1357
BshNI GGYRCC 4 cut(s) 628, 839, 871, 1249
BshTI ACCGGT 1 cut(s) 1060
BsiEI CGRYCG 4 cut(s) 59, 373, 688, 1061
BsiHKAI GWGCWC 3 cut(s) 354, 639, 985
BsiHKCI CYCGRG 3 cut(s) 299, 347, 632
BsiWI CGTACG 1 cut(s) 1236
BslFI GGGAC 1 cut(s) 982
BslI CCNNNNNNNGG 8 cut(s) 38, 382, 393, 408, 468, 574, 575, 1083
BsmAI GTCTC 1 cut(s) 191
BsmFI GGGAC 1 cut(s) 982
BsnI GGCC 6 cut(s) 386, 397, 584, 675, 934, 1357
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 3 cut(s) 299, 347, 632
Bsp120I GGGCCC 1 cut(s) 1355
Bsp1286I GDGCHC 6 cut(s) 354, 633, 639, 985, 1359, 1403
Bsp13I TCCGGA 1 cut(s) 31
Bsp1407I TGTACA 2 cut(s) 1005, 1164
BspANI GGCC 6 cut(s) 386, 397, 584, 675, 934, 1357
BspCNI CTCAG 2 cut(s) 916, 1273
BspEI TCCGGA 1 cut(s) 31
BspFNI CGCG 5 cut(s) 55, 61, 512, 1043, 1445
BspLI GGNNCC 8 cut(s) 630, 705, 841, 873, 918, 1251, 1356, 1357
BspMAI CTGCAG 1 cut(s) 744
BspMI ACCTGC 1 cut(s) 1282
BspPI GGATC 6 cut(s) 145, 199, 480, 698, 711, 1161
BspT107I GGYRCC 4 cut(s) 628, 839, 871, 1249
BspTNI GGTCTC 1 cut(s) 191
BsrBI CCGCTC 1 cut(s) 954
BsrFI RCCGGY 5 cut(s) 188, 613, 848, 1060, 1159
BsrGI TGTACA 2 cut(s) 1005, 1164
BsrI ACTGG 1 cut(s) 935
BssAI RCCGGY 5 cut(s) 188, 613, 848, 1060, 1159
BssECI CCNNGG 7 cut(s) 53, 89, 298, 299, 300, 568, 965
BssNAI GTATAC 1 cut(s) 1257
BssNI GRCGYC 2 cut(s) 315, 1250
BssSI CACGAG 1 cut(s) 362
Bst1107I GTATAC 1 cut(s) 1257
Bst2BI CACGAG 1 cut(s) 362
Bst2UI CCWGG 3 cut(s) 250, 394, 403
Bst4CI ACNGT 6 cut(s) 443, 628, 786, 839, 973, 1169
Bst6I CTCTTC 1 cut(s) 425
BstACI GRCGYC 2 cut(s) 315, 1250
BstAPI GCANNNNNTGC 4 cut(s) 358, 748, 757, 871
BstAUI TGTACA 2 cut(s) 1005, 1164
BstBAI YACGTR 1 cut(s) 1228
BstC8I GCNNGC 6 cut(s) 399, 615, 952, 1021, 1338, 1359
BstDEI CTNAG 2 cut(s) 903, 1260
BstDSI CCRYGG 2 cut(s) 53, 89
BstENI CCTNNNNNAGG 2 cut(s) 391, 466
BstF5I GGATG 2 cut(s) 411, 564
BstFNI CGCG 5 cut(s) 55, 61, 512, 1043, 1445
BstH2I RGCGCY 1 cut(s) 1253
BstHHI GCGC 7 cut(s) 514, 619, 1019, 1045, 1252, 1280, 1309
BstMAI GTCTC 1 cut(s) 191
BstMCI CGRYCG 4 cut(s) 59, 373, 688, 1061
BstNI CCWGG 3 cut(s) 250, 394, 403
BstNSI RCATGY 3 cut(s) 865, 947, 1099
BstSFI CTRYAG 1 cut(s) 740
BstSLI GKGCMC 2 cut(s) 633, 1359
BstUI CGCG 5 cut(s) 55, 61, 512, 1043, 1445
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 3 cut(s) 150, 204, 703
BstXI CCANNNNNNTGG 1 cut(s) 1228
BstYI RGATCY 3 cut(s) 150, 204, 703
BstZ17I GTATAC 1 cut(s) 1257
BsuRI GGCC 6 cut(s) 386, 397, 584, 675, 934, 1357
BtgI CCRYGG 2 cut(s) 53, 89
BtgZI GCGATG 1 cut(s) 816
BtrI CACGTC 1 cut(s) 277
BtsCI GGATG 2 cut(s) 411, 564
BtsI GCAGTG 1 cut(s) 1356
BtsIMutI CAGTG 2 cut(s) 1174, 1356
BveI ACCTGC 1 cut(s) 1282
Cac8I GCNNGC 6 cut(s) 399, 615, 952, 1021, 1338, 1359
CaiI CAGNNNCTG 1 cut(s) 757
CfoI GCGC 7 cut(s) 514, 619, 1019, 1045, 1252, 1280, 1309
Cfr10I RCCGGY 5 cut(s) 188, 613, 848, 1060, 1159
Cfr13I GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1355, 1356
Cfr42I CCGCGG 1 cut(s) 56
Cfr9I CCCGGG 1 cut(s) 299
CseI GACGC 1 cut(s) 323
Csp6I GTAC 9 cut(s) 289, 367, 787, 1006, 1087, 1165, 1225, 1237, 1297
CspAI ACCGGT 1 cut(s) 1060
CviAII CATG 6 cut(s) 130, 355, 862, 944, 1009, 1096
CviQI GTAC 9 cut(s) 289, 367, 787, 1006, 1087, 1165, 1225, 1237, 1297
DdeI CTNAG 2 cut(s) 903, 1260
DinI GGCGCC 1 cut(s) 1251
DrdI GACNNNNNNGTC 1 cut(s) 812
DriI GACNNNNNGTC 1 cut(s) 1200
DseDI GACNNNNNNGTC 1 cut(s) 812
EaeI YGGCCR 1 cut(s) 932
Eam1104I CTCTTC 1 cut(s) 425
Eam1105I GACNNNNNGTC 1 cut(s) 1200
EarI CTCTTC 1 cut(s) 425
EciI GGCGGA 6 cut(s) 247, 379, 600, 639, 972, 1038
Ecl136II GAGCTC 1 cut(s) 637
Eco147I AGGCCT 1 cut(s) 675
Eco24I GRGCYC 3 cut(s) 639, 1359, 1403
Eco31I GGTCTC 1 cut(s) 191
Eco47I GGWCC 3 cut(s) 97, 459, 500
Eco53kI GAGCTC 1 cut(s) 637
Eco88I CYCGRG 3 cut(s) 299, 347, 632
EcoICRI GAGCTC 1 cut(s) 637
EcoNI CCTNNNNNAGG 2 cut(s) 391, 466
EcoO109I RGGNCCY 2 cut(s) 459, 1355
EcoRI GAATTC 1 cut(s) 493
EcoRII CCWGG 3 cut(s) 248, 392, 401
EcoT38I GRGCYC 3 cut(s) 639, 1359, 1403
EgeI GGCGCC 1 cut(s) 1251
EheI GGCGCC 1 cut(s) 1251
FaeI CATG 6 cut(s) 133, 358, 865, 947, 1012, 1099
FaqI GGGAC 1 cut(s) 982
FatI CATG 6 cut(s) 129, 354, 861, 943, 1008, 1095
FauI CCCGC 7 cut(s) 90, 167, 406, 517, 916, 1366, 1385
FbaI TGATCA 2 cut(s) 778, 1011
FblI GTMKAC 2 cut(s) 1204, 1256
FokI GGATG 2 cut(s) 418, 551
FriOI GRGCYC 3 cut(s) 639, 1359, 1403
FspI TGCGCA 1 cut(s) 1308
GlaI GCGC 7 cut(s) 513, 618, 1018, 1044, 1251, 1279, 1308
HaeII RGCGCY 1 cut(s) 1253
HaeIII GGCC 6 cut(s) 386, 397, 584, 675, 934, 1357
HgaI GACGC 1 cut(s) 323
HhaI GCGC 7 cut(s) 514, 619, 1019, 1045, 1252, 1280, 1309
Hin1I GRCGYC 2 cut(s) 315, 1250
Hin1II CATG 6 cut(s) 133, 358, 865, 947, 1012, 1099
Hin6I GCGC 7 cut(s) 512, 617, 1017, 1043, 1250, 1278, 1307
HinP1I GCGC 7 cut(s) 512, 617, 1017, 1043, 1250, 1278, 1307
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 1 cut(s) 35
HphI GGTGA 6 cut(s) 172, 322, 863, 904, 985, 1075
Hpy166II GTNNAC 7 cut(s) 559, 715, 1147, 1165, 1205, 1257, 1297
Hpy188I TCNGA 8 cut(s) 268, 454, 466, 668, 703, 778, 818, 1141
Hpy188III TCNNGA 3 cut(s) 32, 76, 730
Hpy8I GTNNAC 7 cut(s) 559, 715, 1147, 1165, 1205, 1257, 1297
HpyAV CCTTC 1 cut(s) 862
HpyCH4III ACNGT 6 cut(s) 443, 628, 786, 839, 973, 1169
HpyCH4IV ACGT 5 cut(s) 276, 555, 1143, 1227, 1235
HpyCH4V TGCA 8 cut(s) 135, 361, 742, 751, 760, 865, 1099, 1327
HpyF3I CTNAG 2 cut(s) 903, 1260
HpySE526I ACGT 5 cut(s) 276, 555, 1143, 1227, 1235
Hsp92I GRCGYC 2 cut(s) 315, 1250
Hsp92II CATG 6 cut(s) 133, 358, 865, 947, 1012, 1099
HspAI GCGC 7 cut(s) 512, 617, 1017, 1043, 1250, 1278, 1307
KasI GGCGCC 1 cut(s) 1249
Kpn2I TCCGGA 1 cut(s) 31
KroI GCCGGC 1 cut(s) 613
KroNI GCCGGC 1 cut(s) 615
Ksp22I TGATCA 2 cut(s) 778, 1011
KspI CCGCGG 1 cut(s) 56
LmnI GCTCC 5 cut(s) 300, 649, 818, 922, 980
LweI GCATC 2 cut(s) 348, 888
MaeII ACGT 5 cut(s) 276, 555, 1143, 1227, 1235
MaeIII GTNAC 6 cut(s) 328, 595, 892, 926, 973, 1063
MbiI CCGCTC 1 cut(s) 954
MboII GAAGA 3 cut(s) 317, 412, 804
MflI RGATCY 3 cut(s) 150, 204, 703
MhlI GDGCHC 6 cut(s) 354, 633, 639, 985, 1359, 1403
MluCI AATT 3 cut(s) 493, 504, 762
Mly113I GGCGCC 1 cut(s) 1250
MlyI GAGTC 1 cut(s) 29
MmeI TCCRAC 3 cut(s) 291, 681, 796
MreI CGCCGGCG 1 cut(s) 613
MroI TCCGGA 1 cut(s) 31
MroNI GCCGGC 1 cut(s) 613
MroXI GAANNNNTTC 2 cut(s) 882, 1135
MspA1I CMGCKG 2 cut(s) 55, 1361
MvaI CCWGG 3 cut(s) 250, 394, 403
MvnI CGCG 5 cut(s) 55, 61, 512, 1043, 1445
NaeI GCCGGC 1 cut(s) 615
NarI GGCGCC 1 cut(s) 1250
NgoMIV GCCGGC 1 cut(s) 613
NlaIII CATG 6 cut(s) 133, 358, 865, 947, 1012, 1099
NlaIV GGNNCC 8 cut(s) 630, 705, 841, 873, 918, 1251, 1356, 1357
NmuCI GTSAC 4 cut(s) 328, 892, 973, 1063
NsbI TGCGCA 1 cut(s) 1308
NspI RCATGY 3 cut(s) 865, 947, 1099
PaeR7I CTCGAG 1 cut(s) 347
PaqCI CACCTGC 1 cut(s) 1282
PceI AGGCCT 1 cut(s) 675
PcsI WCGNNNNNNNCGW 1 cut(s) 345
PdiI GCCGGC 1 cut(s) 615
PdmI GAANNNNTTC 2 cut(s) 882, 1135
Pfl23II CGTACG 1 cut(s) 1236
PflFI GACNNNGTC 1 cut(s) 689
PinAI ACCGGT 1 cut(s) 1060
Ple19I CGATCG 1 cut(s) 373
PleI GAGTC 1 cut(s) 29
PluTI GGCGCC 1 cut(s) 1253
PpsI GAGTC 1 cut(s) 29
Ppu21I YACGTR 1 cut(s) 1228
PpuMI RGGWCCY 1 cut(s) 459
Psp124BI GAGCTC 1 cut(s) 639
Psp1406I AACGTT 1 cut(s) 555
Psp5II RGGWCCY 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 248, 392, 401
PspGI CCWGG 3 cut(s) 248, 392, 401
PspLI CGTACG 1 cut(s) 1236
PspN4I GGNNCC 8 cut(s) 630, 705, 841, 873, 918, 1251, 1356, 1357
PspOMI GGGCCC 1 cut(s) 1355
PspPI GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1355, 1356
PspPPI RGGWCCY 1 cut(s) 459
PspXI VCTCGAGB 1 cut(s) 347
PsrI GAACNNNNNNTAC 2 cut(s) 98, 130
PstI CTGCAG 1 cut(s) 744
PstNI CAGNNNCTG 1 cut(s) 757
PsuI RGATCY 3 cut(s) 150, 204, 703
PsyI GACNNNGTC 1 cut(s) 689
PvuI CGATCG 1 cut(s) 373
RsaI GTAC 9 cut(s) 290, 368, 788, 1007, 1088, 1166, 1226, 1238, 1298
RsaNI GTAC 9 cut(s) 289, 367, 787, 1006, 1087, 1165, 1225, 1237, 1297
SacI GAGCTC 1 cut(s) 639
SacII CCGCGG 1 cut(s) 56
Sau96I GGNCC 7 cut(s) 97, 384, 396, 459, 500, 1355, 1356
SchI GAGTC 1 cut(s) 29
SduI GDGCHC 6 cut(s) 354, 633, 639, 985, 1359, 1403
SfaNI GCATC 2 cut(s) 348, 888
SfcI CTRYAG 1 cut(s) 740
SfoI GGCGCC 1 cut(s) 1251
Sfr274I CTCGAG 1 cut(s) 347
Sfr303I CCGCGG 1 cut(s) 56
SgrAI CRCCGGYG 3 cut(s) 188, 613, 848
SgrBI CCGCGG 1 cut(s) 56
SinI GGWCC 3 cut(s) 97, 459, 500
SlaI CTCGAG 1 cut(s) 347
SmaI CCCGGG 1 cut(s) 301
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
Sse9I AATT 3 cut(s) 493, 504, 762
SseBI AGGCCT 1 cut(s) 675
SspDI GGCGCC 1 cut(s) 1249
SstI GAGCTC 1 cut(s) 639
StuI AGGCCT 1 cut(s) 675
TaaI ACNGT 6 cut(s) 443, 628, 786, 839, 973, 1169
TaiI ACGT 5 cut(s) 279, 558, 1146, 1230, 1238
TaqI TCGA 5 cut(s) 69, 75, 312, 348, 483
TasI AATT 3 cut(s) 493, 504, 762
TatI WGTACW 3 cut(s) 1005, 1164, 1296
TscAI CASTG 2 cut(s) 1174, 1356
TseFI GTSAC 4 cut(s) 328, 892, 973, 1063
Tsp45I GTSAC 4 cut(s) 328, 892, 973, 1063
TspDTI ATGAA 2 cut(s) 118, 553
TspGWI ACGGA 2 cut(s) 226, 316
TspMI CCCGGG 1 cut(s) 299
TspRI CASTG 2 cut(s) 1174, 1356
Tth111I GACNNNGTC 1 cut(s) 689
VpaK11BI GGWCC 3 cut(s) 97, 459, 500
XagI CCTNNNNNAGG 2 cut(s) 391, 466
XapI RAATTY 1 cut(s) 493
XceI RCATGY 3 cut(s) 865, 947, 1099
XhoI CTCGAG 1 cut(s) 347
XmaI CCCGGG 1 cut(s) 299
XmiI GTMKAC 2 cut(s) 1204, 1256
XmnI GAANNNNTTC 2 cut(s) 882, 1135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.