Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0005089

Physical Location & Seq

Genomic Coordinates Forward (+)

41509298 .. 41515345

Gene Structure 6048 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1281100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGGAGGTGGAGGAGATACAAGCCAGCAACAAGTTCCCAAGAATCGGAAATGGCAGCAGCAGAGACCACAAGCCATCACCCGAAGACGACGACAATCAAGACCCATCATGCCTAGAGGTCAAGAGGGACGCCGCCACCACAGCCGCAGCCGATGCGGGCAACCGTCTCCGCGGTTGGCACCATTCCCGCATCATCCGCGTTTCCAGAGCCTCCGGCGGCAAAGATCGGCACAGCAAGGTCTGGACTTCAAAAGGGTTGAGAGACCGGAGGGTCCGGTTGTCTGTAACCACCGCCATAGAGTTATACGATCTCCAAGATCGGTTGAATTACGACCAGCCCAGCAAAGCAATTGAGTGGCTGATCAAAGCCGCCGCCGATGCCATCGCTGAGCTCCCTTCTCTGAACAATTCTTCGTTCCCCGACACGCCTAAGCAGCTCAGCGACGAGAAGAGGGCGAGCTGCGAGCGTGGAGGGTTTGATTCGGCAGAGATTGAGTTCGATCAGAACTACAACCAGAATCAGAACCAGACCGGGAACCAAAGTCAGCACCTTTCCTTGTCGAAATCCGCTTGCTCCAGTACTTCCGAGACCAGCAAGGGATCCGGGCTGTCCCTTTCTCGGTCGGAGGTTCGGGTGAACCGGTCCAAGGCCCGGGAGCGGGCAAGAGAAAGAGCCGCCAAGGACAAGGACAAAGAAAGCATTGAGTCAGCTTACCCGCACAACATTTCCCAACAAAATTCTTCTTTCACTGAACTTCTCACCGCCGGCATCGGCACTGCTCACAACAACAACGATTCTCGGACCGCATCTGCTCATCATCATCAGCAGAATCATGGCTGCGGCGGCGGCGAGCCCATTTTGTTCCACAAGGCACCAGCACCAATGGATTACTTCAGTCCCGGGCTTCTCGGGTTGTCCTCCTCGGCCCGGACTCATCACTCGGCCGGATTCTCCGGACAAATCCATTTGGGGATGAACTCTATTCCGCAGACAATGTCGGTTGTCTCCCCGTTCAATGTGTCCGGGGAACATCATCACGGACATCACAGTTCGGAGCTTCAGCACTTCTCGTTTGTTCCCGACCTCATCCCGGTCACGACCTCGTCGGAACCGGGCAATGGCGGTGACTACAACCTGAACTTTTCGATCTCTTCTTCCGGCGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCTTCCTCTTCACCGTCTCTTATGCCTCATCACCTTCAGAGGTTTTCTCCCATAGACGGATCGTCCAATGTACCCTTCTTCATTGGAGCTGCTGCGGCCGCGGCCGCGCCAACCATGGAGAATCATCACCACCACCACCACCACCACCACCATCAGCAGCACCAACAGCAATTCCCAGGTGGATTTGATCGCCGCTTGCAGCAACTCTACGGAGACGGAACCCGGCATGCAGACCACAAGGGCAAAGCAAAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0008285 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009965 GO:0009987 GO:0010016 GO:0010099 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040034 GO:0042127 GO:0045935 GO:0045962 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000026 GO:2000030 GO:2000112 GO:2000306 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

486

Amino Acids

53.01

Weight (kDa)

7.28

Isoelectric Point (pI)

59.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	72 - 230	4e-42	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30210 AT1G30210 AT4G18390 AT4G18390
fragaria_vesca	FvH4_3g05220 FvH4_3g05220
malus_domestica	MD05G1281100.v1.1 MD10G1259500.v1.1
prunus_persica	Prupe.3G099100_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1
pyrus_communis	pycom05g10530 pycom05g26120 pycom10g21590
rosa_chinensis	RchiOBHm_Chr5g0014491
rosa_laevigata	RLG00000032116
rosa_multiflora	Rmu_sc0000441.1_g000121 Rmu_sc0017039.1_g000003
rosa_roxburghii	Rroxscaffold_1G00062060
rosa_rugosa	Rorug05G0018400 Rorug05G0018500
rosa_samantha	Rh5AG113800 Rh5BG110400 Rh5CG122300 Rh5DG109700
rosa_wichuraiana	Rw5G009870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	269, 1192
AccB1I	GGYRCC	2 cut(s)	177, 871
AccBSI	CCGCTC	1 cut(s)	658
AccII	CGCG	4 cut(s)	171, 198, 1301, 1307
AccIII	TCCGGA	1 cut(s)	953
AclWI	GGATC	3 cut(s)	594, 607, 1267
AcoI	YGGCCR	3 cut(s)	942, 1296, 1302
AcsI	RAATTY	1 cut(s)	736
AcuI	CTGAAG	4 cut(s)	877, 1043, 1175, 1220
AcyI	GRCGYC	1 cut(s)	129
AfaI	GTAC	2 cut(s)	580, 1272
AgeI	ACCGGT	1 cut(s)	639
AgsI	TTSAA	4 cut(s)	249, 325, 1015, 1177
AhdI	GACNNNNNGTC	1 cut(s)	1261
AjnI	CCWGG	1 cut(s)	1375
AjuI	GAANNNNNNNTTGG	2 cut(s)	1259, 1291
AluBI	AGCT	6 cut(s)	391, 436, 459, 710, 1057, 1289
AluI	AGCT	6 cut(s)	391, 436, 459, 710, 1057, 1289
Alw21I	GWGCWC	1 cut(s)	393
Alw26I	GTCTC	7 cut(s)	57, 170, 255, 581, 1009, 1221, 1407
AlwI	GGATC	3 cut(s)	594, 607, 1267
Ama87I	CYCGRG	3 cut(s)	651, 899, 908
Aor13HI	TCCGGA	1 cut(s)	953
AoxI	GGCC	6 cut(s)	648, 924, 942, 1162, 1296, 1302
ApoI	RAATTY	1 cut(s)	736
AsiGI	ACCGGT	1 cut(s)	639
AspLEI	GCGC	1 cut(s)	1309
AspS9I	GGNCC	6 cut(s)	271, 642, 649, 801, 925, 1185
AsuHPI	GGTGA	7 cut(s)	69, 646, 751, 1136, 1203, 1223, 1319
AvaI	CYCGRG	3 cut(s)	651, 899, 908
AvaII	GGWCC	4 cut(s)	271, 642, 801, 1185
BamHI	GGATCC	1 cut(s)	599
BanI	GGYRCC	2 cut(s)	177, 871
BanII	GRGCYC	2 cut(s)	393, 855
BbsI	GAAGAC	1 cut(s)	90
Bbv12I	GWGCWC	1 cut(s)	393
BccI	CCATC	4 cut(s)	82, 112, 389, 1359
BciT130I	CCWGG	1 cut(s)	1377
BclI	TGATCA	1 cut(s)	360
BcoDI	GTCTC	7 cut(s)	57, 170, 255, 581, 1009, 1221, 1407
BfaI	CTAG	1 cut(s)	113
BlpI	GCTNAGC	2 cut(s)	387, 437
BmcAI	AGTACT	1 cut(s)	580
Bme18I	GGWCC	4 cut(s)	271, 642, 801, 1185
BmeRI	GACNNNNNGTC	1 cut(s)	1261
BmeT110I	CYCGRG	3 cut(s)	651, 899, 908
BmgT120I	GGNCC	6 cut(s)	271, 642, 649, 801, 925, 1185
BmiI	GGNNCC	9 cut(s)	179, 272, 536, 601, 873, 1110, 1186, 1187, 1420
BmsI	GCATC	5 cut(s)	142, 198, 367, 777, 815
BpiI	GAAGAC	1 cut(s)	90
BplI	GAGNNNNNCTC	2 cut(s)	1231, 1263
BpmI	CTGGAG	1 cut(s)	559
Bpu10I	CCTNAGC	1 cut(s)	429
Bpu1102I	GCTNAGC	2 cut(s)	387, 437
BsaHI	GRCGYC	1 cut(s)	129
BsaI	GGTCTC	3 cut(s)	57, 255, 581
BsaWI	WCCGGW	4 cut(s)	264, 273, 639, 953
Bse118I	RCCGGY	2 cut(s)	639, 764
Bse1I	ACTGG	1 cut(s)	576
Bse3DI	GCAATG	1 cut(s)	1123
BseAI	TCCGGA	1 cut(s)	953
BseBI	CCWGG	1 cut(s)	1377
BseGI	GGATG	3 cut(s)	192, 978, 1086
BseMI	GCAATG	1 cut(s)	1123
BseMII	CTCAG	2 cut(s)	378, 451
BseNI	ACTGG	1 cut(s)	576
BseRI	GAGGAG	2 cut(s)	26, 910
BseX3I	CGGCCG	3 cut(s)	942, 1296, 1302
BseYI	CCCAGC	1 cut(s)	338
Bsh1236I	CGCG	4 cut(s)	171, 198, 1301, 1307
Bsh1285I	CGRYCG	4 cut(s)	623, 945, 1299, 1305
BshFI	GGCC	6 cut(s)	650, 926, 944, 1164, 1298, 1304
BshNI	GGYRCC	2 cut(s)	177, 871
BshTI	ACCGGT	1 cut(s)	639
BsiEI	CGRYCG	4 cut(s)	623, 945, 1299, 1305
BsiHKAI	GWGCWC	1 cut(s)	393
BsiHKCI	CYCGRG	3 cut(s)	651, 899, 908
BslFI	GGGAC	4 cut(s)	140, 595, 882, 1198
BsmAI	GTCTC	7 cut(s)	57, 170, 255, 581, 1009, 1221, 1407
BsmBI	CGTCTC	3 cut(s)	170, 1221, 1407
BsmFI	GGGAC	4 cut(s)	140, 595, 882, 1198
BsnI	GGCC	6 cut(s)	650, 926, 944, 1164, 1298, 1304
Bso31I	GGTCTC	3 cut(s)	57, 255, 581
BsoBI	CYCGRG	3 cut(s)	651, 899, 908
Bsp1286I	GDGCHC	2 cut(s)	393, 855
Bsp13I	TCCGGA	1 cut(s)	953
Bsp143I	GATC	9 cut(s)	223, 307, 316, 360, 499, 599, 1146, 1259, 1387
Bsp1720I	GCTNAGC	2 cut(s)	387, 437
Bsp19I	CCATGG	1 cut(s)	1314
BspANI	GGCC	6 cut(s)	650, 926, 944, 1164, 1298, 1304
BspCNI	CTCAG	2 cut(s)	379, 450
BspEI	TCCGGA	1 cut(s)	953
BspFNI	CGCG	4 cut(s)	171, 198, 1301, 1307
BspLI	GGNNCC	9 cut(s)	179, 272, 536, 601, 873, 1110, 1186, 1187, 1420
BspPI	GGATC	3 cut(s)	594, 607, 1267
BspT107I	GGYRCC	2 cut(s)	177, 871
BspTNI	GGTCTC	3 cut(s)	57, 255, 581
BsrBI	CCGCTC	1 cut(s)	658
BsrDI	GCAATG	1 cut(s)	1123
BsrFI	RCCGGY	2 cut(s)	639, 764
BsrI	ACTGG	1 cut(s)	576
BssAI	RCCGGY	2 cut(s)	639, 764
BssMI	GATC	9 cut(s)	223, 307, 316, 360, 499, 599, 1146, 1259, 1387
BssNI	GRCGYC	1 cut(s)	129
BssT1I	CCWWGG	3 cut(s)	645, 678, 1314
Bst2UI	CCWGG	1 cut(s)	1377
Bst4CI	ACNGT	3 cut(s)	164, 1049, 1215
Bst6I	CTCTTC	3 cut(s)	443, 1156, 1213
BstACI	GRCGYC	1 cut(s)	129
BstAPI	GCANNNNNTGC	1 cut(s)	152
BstDEI	CTNAG	3 cut(s)	387, 429, 437
BstDSI	CCRYGG	3 cut(s)	169, 1299, 1314
BstF5I	GGATG	3 cut(s)	192, 978, 1086
BstFNI	CGCG	4 cut(s)	171, 198, 1301, 1307
BstHHI	GCGC	1 cut(s)	1309
BstKTI	GATC	9 cut(s)	226, 310, 319, 363, 502, 602, 1149, 1262, 1390
BstMAI	GTCTC	7 cut(s)	57, 170, 255, 581, 1009, 1221, 1407
BstMBI	GATC	9 cut(s)	223, 307, 316, 360, 499, 599, 1146, 1259, 1387
BstMCI	CGRYCG	4 cut(s)	623, 945, 1299, 1305
BstNI	CCWGG	1 cut(s)	1377
BstNSI	RCATGY	1 cut(s)	1430
BstUI	CGCG	4 cut(s)	171, 198, 1301, 1307
BstV2I	GAAGAC	1 cut(s)	90
BstX2I	RGATCY	1 cut(s)	599
BstYI	RGATCY	1 cut(s)	599
BstZI	CGGCCG	3 cut(s)	942, 1296, 1302
BsuRI	GGCC	6 cut(s)	650, 926, 944, 1164, 1298, 1304
BtgI	CCRYGG	3 cut(s)	169, 1299, 1314
BtgZI	GCGATG	1 cut(s)	367
BtsCI	GGATG	3 cut(s)	192, 978, 1086
BtsI	GCAGTG	1 cut(s)	774
BtsIMutI	CAGTG	2 cut(s)	747, 774
CciNI	GCGGCCGC	2 cut(s)	1296, 1302
CfoI	GCGC	1 cut(s)	1309
Cfr10I	RCCGGY	2 cut(s)	639, 764
Cfr13I	GGNCC	6 cut(s)	271, 642, 649, 801, 925, 1185
Cfr42I	CCGCGG	2 cut(s)	172, 1302
Cfr9I	CCCGGG	2 cut(s)	651, 899
CpoI	CGGWCCG	1 cut(s)	801
CseI	GACGC	1 cut(s)	137
Csp6I	GTAC	2 cut(s)	579, 1271
CspAI	ACCGGT	1 cut(s)	639
CspI	CGGWCCG	1 cut(s)	801
CviAII	CATG	4 cut(s)	108, 833, 1315, 1427
CviQI	GTAC	2 cut(s)	579, 1271
DdeI	CTNAG	3 cut(s)	387, 429, 437
DpnI	GATC	9 cut(s)	225, 309, 318, 362, 501, 601, 1148, 1261, 1389
DpnII	GATC	9 cut(s)	223, 307, 316, 360, 499, 599, 1146, 1259, 1387
DrdI	GACNNNNNNGTC	2 cut(s)	269, 1192
DriI	GACNNNNNGTC	1 cut(s)	1261
DseDI	GACNNNNNNGTC	2 cut(s)	269, 1192
EaeI	YGGCCR	3 cut(s)	942, 1296, 1302
EagI	CGGCCG	3 cut(s)	942, 1296, 1302
Eam1104I	CTCTTC	3 cut(s)	443, 1156, 1213
Eam1105I	GACNNNNNGTC	1 cut(s)	1261
EarI	CTCTTC	3 cut(s)	443, 1156, 1213
Ecl136II	GAGCTC	1 cut(s)	391
EclXI	CGGCCG	3 cut(s)	942, 1296, 1302
Eco130I	CCWWGG	3 cut(s)	645, 678, 1314
Eco24I	GRGCYC	2 cut(s)	393, 855
Eco31I	GGTCTC	3 cut(s)	57, 255, 581
Eco47I	GGWCC	4 cut(s)	271, 642, 801, 1185
Eco52I	CGGCCG	3 cut(s)	942, 1296, 1302
Eco53kI	GAGCTC	1 cut(s)	391
Eco57I	CTGAAG	4 cut(s)	877, 1043, 1175, 1220
Eco88I	CYCGRG	3 cut(s)	651, 899, 908
EcoICRI	GAGCTC	1 cut(s)	391
EcoO109I	RGGNCCY	1 cut(s)	1185
EcoRII	CCWGG	1 cut(s)	1375
EcoT14I	CCWWGG	3 cut(s)	645, 678, 1314
EcoT38I	GRGCYC	2 cut(s)	393, 855
ErhI	CCWWGG	3 cut(s)	645, 678, 1314
Esp3I	CGTCTC	3 cut(s)	170, 1221, 1407
FaeI	CATG	4 cut(s)	111, 836, 1318, 1430
FaiI	YATR	8 cut(s)	109, 296, 304, 834, 1223, 1253, 1316, 1428
FaqI	GGGAC	4 cut(s)	140, 595, 882, 1198
FatI	CATG	4 cut(s)	107, 832, 1314, 1426
FauI	CCCGC	4 cut(s)	148, 194, 651, 723
FbaI	TGATCA	1 cut(s)	360
FokI	GGATG	3 cut(s)	179, 985, 1073
FriOI	GRGCYC	2 cut(s)	393, 855
FspBI	CTAG	1 cut(s)	113
GlaI	GCGC	1 cut(s)	1308
GsaI	CCCAGC	1 cut(s)	342
GsuI	CTGGAG	1 cut(s)	559
HaeIII	GGCC	6 cut(s)	650, 926, 944, 1164, 1298, 1304
HgaI	GACGC	1 cut(s)	137
HhaI	GCGC	1 cut(s)	1309
Hin1I	GRCGYC	1 cut(s)	129
Hin1II	CATG	4 cut(s)	111, 836, 1318, 1430
Hin6I	GCGC	1 cut(s)	1307
HinP1I	GCGC	1 cut(s)	1307
HinfI	GANTC	9 cut(s)	42, 479, 517, 704, 794, 829, 931, 948, 1321
HphI	GGTGA	7 cut(s)	69, 646, 751, 1136, 1203, 1223, 1319
Hpy166II	GTNNAC	1 cut(s)	637
Hpy188III	TCNNGA	7 cut(s)	98, 121, 204, 241, 954, 1079, 1096
Hpy8I	GTNNAC	1 cut(s)	637
Hpy99I	CGWCG	3 cut(s)	92, 446, 1108
HpyAV	CCTTC	4 cut(s)	405, 1199, 1244, 1285
HpyCH4III	ACNGT	3 cut(s)	164, 1049, 1215
HpyCH4V	TGCA	2 cut(s)	1399, 1430
HpyF3I	CTNAG	3 cut(s)	387, 429, 437
Hsp92I	GRCGYC	1 cut(s)	129
Hsp92II	CATG	4 cut(s)	111, 836, 1318, 1430
HspAI	GCGC	1 cut(s)	1307
KflI	GGGWCCC	1 cut(s)	1185
Kpn2I	TCCGGA	1 cut(s)	953
KroI	GCCGGC	1 cut(s)	764
KroNI	GCCGGC	1 cut(s)	766
Ksp22I	TGATCA	1 cut(s)	360
KspI	CCGCGG	2 cut(s)	172, 1302
Kzo9I	GATC	9 cut(s)	223, 307, 316, 360, 499, 599, 1146, 1259, 1387
LmnI	GCTCC	5 cut(s)	396, 578, 655, 1054, 1286
LweI	GCATC	5 cut(s)	142, 198, 367, 777, 815
MaeI	CTAG	1 cut(s)	113
MaeIII	GTNAC	3 cut(s)	283, 1093, 1124
MalI	GATC	9 cut(s)	225, 309, 318, 362, 501, 601, 1148, 1261, 1389
MbiI	CCGCTC	1 cut(s)	658
MboI	GATC	9 cut(s)	223, 307, 316, 360, 499, 599, 1146, 1259, 1387
MboII	GAAGA	9 cut(s)	95, 402, 460, 732, 1143, 1146, 1194, 1200, 1270
MfeI	CAATTG	1 cut(s)	348
MflI	RGATCY	1 cut(s)	599
MhlI	GDGCHC	2 cut(s)	393, 855
MluCI	AATT	6 cut(s)	325, 348, 406, 736, 1198, 1370
MlyI	GAGTC	2 cut(s)	713, 925
MmeI	TCCRAC	2 cut(s)	603, 1086
MroI	TCCGGA	1 cut(s)	953
MroNI	GCCGGC	1 cut(s)	764
MspA1I	CMGCKG	2 cut(s)	171, 1301
MunI	CAATTG	1 cut(s)	348
MvaI	CCWGG	1 cut(s)	1377
MvnI	CGCG	4 cut(s)	171, 198, 1301, 1307
NaeI	GCCGGC	1 cut(s)	766
NcoI	CCATGG	1 cut(s)	1314
NdeII	GATC	9 cut(s)	223, 307, 316, 360, 499, 599, 1146, 1259, 1387
NgoMIV	GCCGGC	1 cut(s)	764
NlaIII	CATG	4 cut(s)	111, 836, 1318, 1430
NlaIV	GGNNCC	9 cut(s)	179, 272, 536, 601, 873, 1110, 1186, 1187, 1420
NmeAIII	GCCGAG	2 cut(s)	902, 920
NmuCI	GTSAC	2 cut(s)	1093, 1124
NotI	GCGGCCGC	2 cut(s)	1296, 1302
NspI	RCATGY	1 cut(s)	1430
PaeI	GCATGC	1 cut(s)	1430
PdiI	GCCGGC	1 cut(s)	766
PfeI	GAWTC	7 cut(s)	42, 479, 517, 794, 829, 948, 1321
PflFI	GACNNNGTC	2 cut(s)	994, 1102
PinAI	ACCGGT	1 cut(s)	639
PleI	GAGTC	2 cut(s)	712, 925
PpsI	GAGTC	2 cut(s)	712, 925
PpuMI	RGGWCCY	1 cut(s)	1185
Psp124BI	GAGCTC	1 cut(s)	393
Psp5II	RGGWCCY	1 cut(s)	1185
Psp6I	CCWGG	1 cut(s)	1375
PspFI	CCCAGC	1 cut(s)	338
PspGI	CCWGG	1 cut(s)	1375
PspN4I	GGNNCC	9 cut(s)	179, 272, 536, 601, 873, 1110, 1186, 1187, 1420
PspPI	GGNCC	6 cut(s)	271, 642, 649, 801, 925, 1185
PspPPI	RGGWCCY	1 cut(s)	1185
PsuI	RGATCY	1 cut(s)	599
PsyI	GACNNNGTC	2 cut(s)	994, 1102
RsaI	GTAC	2 cut(s)	580, 1272
RsaNI	GTAC	2 cut(s)	579, 1271
Rsr2I	CGGWCCG	1 cut(s)	801
RsrII	CGGWCCG	1 cut(s)	801
SacI	GAGCTC	1 cut(s)	393
SacII	CCGCGG	2 cut(s)	172, 1302
Sau3AI	GATC	9 cut(s)	223, 307, 316, 360, 499, 599, 1146, 1259, 1387
Sau96I	GGNCC	6 cut(s)	271, 642, 649, 801, 925, 1185
ScaI	AGTACT	1 cut(s)	580
SchI	GAGTC	2 cut(s)	713, 925
SduI	GDGCHC	2 cut(s)	393, 855
SfaNI	GCATC	5 cut(s)	142, 198, 367, 777, 815
Sfr303I	CCGCGG	2 cut(s)	172, 1302
SgrBI	CCGCGG	2 cut(s)	172, 1302
SinI	GGWCC	4 cut(s)	271, 642, 801, 1185
SmaI	CCCGGG	2 cut(s)	653, 901
SphI	GCATGC	1 cut(s)	1430
Sse9I	AATT	6 cut(s)	325, 348, 406, 736, 1198, 1370
SspMI	CTAG	1 cut(s)	113
SstI	GAGCTC	1 cut(s)	393
StyI	CCWWGG	3 cut(s)	645, 678, 1314
TaaI	ACNGT	3 cut(s)	164, 1049, 1215
TaqI	TCGA	3 cut(s)	498, 560, 1145
TaqII	GACCGA	1 cut(s)	609
TasI	AATT	6 cut(s)	325, 348, 406, 736, 1198, 1370
TatI	WGTACW	1 cut(s)	578
TfiI	GAWTC	7 cut(s)	42, 479, 517, 794, 829, 948, 1321
TscAI	CASTG	2 cut(s)	754, 781
TseFI	GTSAC	2 cut(s)	1093, 1124
Tsp45I	GTSAC	2 cut(s)	1093, 1124
TspDTI	ATGAA	2 cut(s)	989, 1270
TspGWI	ACGGA	4 cut(s)	1053, 1272, 1425, 1431
TspMI	CCCGGG	2 cut(s)	651, 899
TspRI	CASTG	2 cut(s)	754, 781
Tth111I	GACNNNGTC	2 cut(s)	994, 1102
VpaK11BI	GGWCC	4 cut(s)	271, 642, 801, 1185
XapI	RAATTY	1 cut(s)	736
XceI	RCATGY	1 cut(s)	1430
XmaI	CCCGGG	2 cut(s)	651, 899
XspI	CTAG	1 cut(s)	113
ZrmI	AGTACT	1 cut(s)	580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.