Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0005089

Physical Location & Seq

Genomic Coordinates Forward (+)

84093638 .. 84101071

Gene Structure 7434 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00062060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGGAGGTGGAGGAGATTCAAGCTCAGCAGCCCTGCAAGTTCTCAAGAATTGGAAATGGCGGTAGAGGAAGCACTATAGCCAAGAACCCAGATGAGGAAGACGACGGCGGTGGCGGCCGGGAGCTCAAGAGAGCTGGCGGGGGAGACGCCGGCACAAACCGGCTTAACGGGTGGCACCACTCTCGAATCATCAGGGTTTCGAGAGCCTCCGGAGGCAAAGATCGGCACAGCAAGGTGTGGACTTCAAAGGGGTTGAGGGACAGGAGGGTCCGGTTGTCGGTTTCAACCGCTATTGACTTCTACGATCTTCAAGATCGGCTGGGTTATGACCAACCCAGTAAGGCAGTGGAGTGGCTGATCAAAGCTGCCGCTGACGCCATCTCCGAGCTTCCTTCTCTGAACAGCTCGTTCCCGGACACTCCGAAGCAGCTCAGCGATGAGAAGAGGGCGAGCAGCGAGCGCGGGTTCGATTCTGTTGAGCTTGATGTTGATGGTGACCCCAATTATCACCATCAAGTGCAGAATCATCATCAGCTTTGTATGTCGAAATCTGCTTGCAGTAGTACTTCTGAGACGAGCAAGGGATCGGGGCTGTCTCTGTCCCGGTCGGAGATGCGGGTGAACCGGGACAAGGCCAGGGAGCGAGCCCGGGAGAGAGCAGCCAAGGACAAGGAGAAAGACTGCAACAACGACGAGTCCTCCCGCATTGCACAGGCTATTTCTCAAAATGCATCGTTTACTGAGCTTCTCACCGGCGGAATCGGAAACAACAGGAACAACAGTCCCACCGGTCATCAGCAGAGCAATCCCGGTAACAACAACGGCGAGCCCATTTTGTTCCACAAGGCAGCACCACCGATGGACTACTTCGGGTCGAGTCTTCTGGGACTTTCCTCAACCCCAACCCGAAACCACCATCAATTCTCCGGGCAAATCCACCTGGGGAATTCGCTCCCGCAGACAATGTTCACCATCTCCGGTGACCACAACAACAGCCACCCGGAGATGCAGCATTTCTCGTTTGTTCCCGACTACATCCCTGTCTCGGCAGCGGCCAACGGCGGCGAATACAACCTCAACTTCTCCATGTCTTCTTCCGGCGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCATCATCACCACCTTCTCTTTTGCCTCACCTCCAGAGGTTCTCTCCCATGGACGTATCGTCCAGTGTACCTTTCTTCATTGGAGCTGCCGCCGCAGCCGCAGCTCCAACCATGGACAATCACCAGCACCACCAGTTCCCAGCTGGATTGCAGCTCTACGGCGACGGAAGCCGGCATTCAGACCACAAGGGAAAAGCAAAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0008285 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009965 GO:0009987 GO:0010016 GO:0010099 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040034 GO:0042127 GO:0045935 GO:0045962 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000026 GO:2000030 GO:2000112 GO:2000306 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

448

Amino Acids

48.58

Weight (kDa)

7.37

Isoelectric Point (pI)

48.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	71 - 225	1.5e-42	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30210 AT1G30210 AT4G18390 AT4G18390
fragaria_vesca	FvH4_3g05220 FvH4_3g05220
malus_domestica	MD05G1281100.v1.1 MD10G1259500.v1.1
prunus_persica	Prupe.3G099100_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1
pyrus_communis	pycom05g10530 pycom05g26120 pycom10g21590
rosa_chinensis	RchiOBHm_Chr5g0014491
rosa_laevigata	RLG00000032116
rosa_multiflora	Rmu_sc0000441.1_g000121 Rmu_sc0017039.1_g000003
rosa_roxburghii	Rroxscaffold_1G00062060
rosa_rugosa	Rorug05G0018400 Rorug05G0018500
rosa_samantha	Rh5AG113800 Rh5BG110400 Rh5CG122300 Rh5DG109700
rosa_wichuraiana	Rw5G009870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	266, 1132
AccB1I	GGYRCC	1 cut(s)	174
AccII	CGCG	1 cut(s)	462
AccIII	TCCGGA	1 cut(s)	209
AclWI	GGATC	1 cut(s)	592
AcoI	YGGCCR	2 cut(s)	115, 1053
AcsI	RAATTY	1 cut(s)	946
AcuI	CTGAAG	1 cut(s)	1115
AcyI	GRCGYC	2 cut(s)	147, 375
AfaI	GTAC	2 cut(s)	565, 1209
AfiI	CCNNNNNNNGG	4 cut(s)	94, 277, 631, 1045
AgeI	ACCGGT	1 cut(s)	788
AgsI	TTSAA	5 cut(s)	20, 246, 285, 311, 1117
AhdI	GACNNNNNGTC	1 cut(s)	1198
AjnI	CCWGG	2 cut(s)	635, 939
Alw21I	GWGCWC	1 cut(s)	126
Alw26I	GTCTC	4 cut(s)	138, 566, 600, 1048
AlwI	GGATC	1 cut(s)	592
Ama87I	CYCGRG	1 cut(s)	648
Aor13HI	TCCGGA	1 cut(s)	209
AoxI	GGCC	4 cut(s)	115, 633, 1053, 1102
ApoI	RAATTY	1 cut(s)	946
AsiGI	ACCGGT	1 cut(s)	788
AspLEI	GCGC	1 cut(s)	462
AspS9I	GGNCC	2 cut(s)	268, 1125
AsuC2I	CCSGG	9 cut(s)	119, 413, 604, 626, 649, 650, 810, 928, 1001
AsuHPI	GGTGA	9 cut(s)	500, 506, 631, 742, 961, 992, 1140, 1160, 1253
AvaI	CYCGRG	1 cut(s)	648
AvaII	GGWCC	2 cut(s)	268, 1125
BanI	GGYRCC	1 cut(s)	174
BanII	GRGCYC	3 cut(s)	126, 649, 831
BbsI	GAAGAC	3 cut(s)	105, 872, 1083
Bbv12I	GWGCWC	1 cut(s)	126
BccI	CCATC	6 cut(s)	386, 485, 519, 853, 924, 980
BceAI	ACGGC	4 cut(s)	121, 838, 1075, 1315
BcgI	CGANNNNNNTGC	2 cut(s)	164, 198
BciT130I	CCWGG	2 cut(s)	637, 941
BclI	TGATCA	1 cut(s)	357
BcnI	CCSGG	9 cut(s)	119, 413, 604, 626, 649, 650, 810, 928, 1001
BcoDI	GTCTC	4 cut(s)	138, 566, 600, 1048
BfmI	CTRYAG	1 cut(s)	75
BlpI	GCTNAGC	2 cut(s)	24, 431
BmcAI	AGTACT	1 cut(s)	565
Bme18I	GGWCC	2 cut(s)	268, 1125
BmeRI	GACNNNNNGTC	1 cut(s)	1198
BmeT110I	CYCGRG	1 cut(s)	648
BmgT120I	GGNCC	2 cut(s)	268, 1125
BmiI	GGNNCC	4 cut(s)	176, 269, 1126, 1127
BmrI	ACTGGG	1 cut(s)	330
BmsI	GCATC	3 cut(s)	603, 740, 996
BmuI	ACTGGG	1 cut(s)	330
BpiI	GAAGAC	3 cut(s)	105, 872, 1083
BplI	GAGNNNNNCTC	2 cut(s)	1168, 1200
BpmI	CTGGAG	1 cut(s)	1157
Bpu1102I	GCTNAGC	2 cut(s)	24, 431
BpuEI	CTTGAG	2 cut(s)	28, 110
BpuMI	CCSGG	9 cut(s)	119, 413, 604, 626, 649, 650, 810, 928, 1001
BsaHI	GRCGYC	2 cut(s)	147, 375
BsaJI	CCNNGG	6 cut(s)	636, 648, 663, 940, 1188, 1251
BsaWI	WCCGGW	4 cut(s)	209, 270, 788, 977
BsaXI	ACNNNNNCTCC	4 cut(s)	365, 395, 683, 713
Bsc4I	CCNNNNNNNGG	4 cut(s)	94, 277, 631, 1045
Bse118I	RCCGGY	5 cut(s)	149, 159, 752, 788, 1311
Bse1I	ACTGG	3 cut(s)	336, 1203, 1273
Bse3DI	GCAATG	1 cut(s)	705
BseAI	TCCGGA	1 cut(s)	209
BseBI	CCWGG	2 cut(s)	637, 941
BseDI	CCNNGG	6 cut(s)	636, 648, 663, 940, 1188, 1251
BseGI	GGATG	1 cut(s)	1035
BseLI	CCNNNNNNNGG	4 cut(s)	94, 277, 631, 1045
BseMI	GCAATG	1 cut(s)	705
BseMII	CTCAG	4 cut(s)	38, 445, 561, 732
BseNI	ACTGG	3 cut(s)	336, 1203, 1273
BseRI	GAGGAG	1 cut(s)	26
BseX3I	CGGCCG	1 cut(s)	115
BseYI	CCCAGC	2 cut(s)	319, 1279
BsgI	GTGCAG	1 cut(s)	539
Bsh1236I	CGCG	1 cut(s)	462
Bsh1285I	CGRYCG	2 cut(s)	118, 608
BshFI	GGCC	4 cut(s)	117, 635, 1055, 1104
BshNI	GGYRCC	1 cut(s)	174
BshTI	ACCGGT	1 cut(s)	788
BsiEI	CGRYCG	2 cut(s)	118, 608
BsiHKAI	GWGCWC	1 cut(s)	126
BsiHKCI	CYCGRG	1 cut(s)	648
BslFI	GGGAC	6 cut(s)	272, 586, 641, 768, 900, 1138
BslI	CCNNNNNNNGG	4 cut(s)	94, 277, 631, 1045
BsmAI	GTCTC	4 cut(s)	138, 566, 600, 1048
BsmBI	CGTCTC	2 cut(s)	138, 566
BsmFI	GGGAC	6 cut(s)	272, 586, 641, 768, 900, 1138
BsmI	GAATGC	1 cut(s)	1315
BsnI	GGCC	4 cut(s)	117, 635, 1055, 1104
BsoBI	CYCGRG	1 cut(s)	648
Bsp1286I	GDGCHC	3 cut(s)	126, 649, 831
Bsp13I	TCCGGA	1 cut(s)	209
Bsp143I	GATC	5 cut(s)	220, 304, 313, 357, 584
Bsp1720I	GCTNAGC	2 cut(s)	24, 431
Bsp19I	CCATGG	2 cut(s)	1188, 1251
BspANI	GGCC	4 cut(s)	117, 635, 1055, 1104
BspCNI	CTCAG	4 cut(s)	37, 444, 562, 733
BspEI	TCCGGA	1 cut(s)	209
BspFNI	CGCG	1 cut(s)	462
BspLI	GGNNCC	4 cut(s)	176, 269, 1126, 1127
BspPI	GGATC	1 cut(s)	592
BspT107I	GGYRCC	1 cut(s)	174
BsrDI	GCAATG	1 cut(s)	705
BsrFI	RCCGGY	5 cut(s)	149, 159, 752, 788, 1311
BsrI	ACTGG	3 cut(s)	336, 1203, 1273
BssAI	RCCGGY	5 cut(s)	149, 159, 752, 788, 1311
BssECI	CCNNGG	6 cut(s)	636, 648, 663, 940, 1188, 1251
BssMI	GATC	5 cut(s)	220, 304, 313, 357, 584
BssNI	GRCGYC	2 cut(s)	147, 375
BssT1I	CCWWGG	3 cut(s)	663, 1188, 1251
Bst2UI	CCWGG	2 cut(s)	637, 941
Bst4CI	ACNGT	1 cut(s)	782
Bst6I	CTCTTC	1 cut(s)	437
BstACI	GRCGYC	2 cut(s)	147, 375
BstC8I	GCNNGC	8 cut(s)	136, 151, 451, 458, 556, 645, 827, 1313
BstDEI	CTNAG	4 cut(s)	24, 431, 570, 741
BstDSI	CCRYGG	2 cut(s)	1188, 1251
BstEII	GGTNACC	2 cut(s)	494, 980
BstF5I	GGATG	1 cut(s)	1035
BstFNI	CGCG	1 cut(s)	462
BstHHI	GCGC	1 cut(s)	462
BstKTI	GATC	5 cut(s)	223, 307, 316, 360, 587
BstMAI	GTCTC	4 cut(s)	138, 566, 600, 1048
BstMBI	GATC	5 cut(s)	220, 304, 313, 357, 584
BstMCI	CGRYCG	2 cut(s)	118, 608
BstMWI	GCNNNNNNNGC	8 cut(s)	114, 374, 459, 1232, 1235, 1238, 1241, 1308
BstNI	CCWGG	2 cut(s)	637, 941
BstPI	GGTNACC	2 cut(s)	494, 980
BstSFI	CTRYAG	1 cut(s)	75
BstUI	CGCG	1 cut(s)	462
BstV2I	GAAGAC	3 cut(s)	105, 872, 1083
BstZI	CGGCCG	1 cut(s)	115
BsuRI	GGCC	4 cut(s)	117, 635, 1055, 1104
BtgI	CCRYGG	2 cut(s)	1188, 1251
BtgZI	GCGATG	1 cut(s)	450
BtsCI	GGATG	1 cut(s)	1035
BtsI	GCAGTG	1 cut(s)	351
BtsIMutI	CAGTG	2 cut(s)	351, 1210
Cac8I	GCNNGC	8 cut(s)	136, 151, 451, 458, 556, 645, 827, 1313
CfoI	GCGC	1 cut(s)	462
Cfr10I	RCCGGY	5 cut(s)	149, 159, 752, 788, 1311
Cfr13I	GGNCC	2 cut(s)	268, 1125
Cfr9I	CCCGGG	1 cut(s)	648
CseI	GACGC	2 cut(s)	155, 383
Csp6I	GTAC	2 cut(s)	564, 1208
CspAI	ACCGGT	1 cut(s)	788
CviAII	CATG	3 cut(s)	1087, 1189, 1252
CviQI	GTAC	2 cut(s)	564, 1208
DdeI	CTNAG	4 cut(s)	24, 431, 570, 741
DpnI	GATC	5 cut(s)	222, 306, 315, 359, 586
DpnII	GATC	5 cut(s)	220, 304, 313, 357, 584
DrdI	GACNNNNNNGTC	2 cut(s)	266, 1132
DriI	GACNNNNNGTC	1 cut(s)	1198
DseDI	GACNNNNNNGTC	2 cut(s)	266, 1132
EaeI	YGGCCR	2 cut(s)	115, 1053
EagI	CGGCCG	1 cut(s)	115
Eam1104I	CTCTTC	1 cut(s)	437
Eam1105I	GACNNNNNGTC	1 cut(s)	1198
EarI	CTCTTC	1 cut(s)	437
EciI	GGCGGA	1 cut(s)	771
Ecl136II	GAGCTC	1 cut(s)	124
EclXI	CGGCCG	1 cut(s)	115
Eco130I	CCWWGG	3 cut(s)	663, 1188, 1251
Eco24I	GRGCYC	3 cut(s)	126, 649, 831
Eco47I	GGWCC	2 cut(s)	268, 1125
Eco52I	CGGCCG	1 cut(s)	115
Eco53kI	GAGCTC	1 cut(s)	124
Eco57I	CTGAAG	1 cut(s)	1115
Eco88I	CYCGRG	1 cut(s)	648
Eco91I	GGTNACC	2 cut(s)	494, 980
EcoICRI	GAGCTC	1 cut(s)	124
EcoO109I	RGGNCCY	1 cut(s)	1125
EcoO65I	GGTNACC	2 cut(s)	494, 980
EcoRI	GAATTC	1 cut(s)	946
EcoRII	CCWGG	2 cut(s)	635, 939
EcoT14I	CCWWGG	3 cut(s)	663, 1188, 1251
EcoT22I	ATGCAT	1 cut(s)	733
EcoT38I	GRGCYC	3 cut(s)	126, 649, 831
ErhI	CCWWGG	3 cut(s)	663, 1188, 1251
Esp3I	CGTCTC	2 cut(s)	138, 566
FaeI	CATG	3 cut(s)	1090, 1192, 1255
FaiI	YATR	6 cut(s)	77, 327, 542, 1088, 1190, 1253
FaqI	GGGAC	6 cut(s)	272, 586, 641, 768, 900, 1138
FatI	CATG	3 cut(s)	1086, 1188, 1251
FauI	CCCGC	5 cut(s)	131, 455, 609, 710, 963
FbaI	TGATCA	1 cut(s)	357
FokI	GGATG	1 cut(s)	1022
FriOI	GRGCYC	3 cut(s)	126, 649, 831
GlaI	GCGC	1 cut(s)	461
GsaI	CCCAGC	2 cut(s)	323, 1283
GsuI	CTGGAG	1 cut(s)	1157
HaeIII	GGCC	4 cut(s)	117, 635, 1055, 1104
HgaI	GACGC	2 cut(s)	155, 383
HhaI	GCGC	1 cut(s)	462
Hin1I	GRCGYC	2 cut(s)	147, 375
Hin1II	CATG	3 cut(s)	1090, 1192, 1255
Hin6I	GCGC	1 cut(s)	460
HinP1I	GCGC	1 cut(s)	460
HinfI	GANTC	7 cut(s)	16, 186, 470, 523, 695, 759, 877
HphI	GGTGA	9 cut(s)	500, 506, 631, 742, 961, 992, 1140, 1160, 1253
Hpy166II	GTNNAC	5 cut(s)	240, 622, 738, 969, 1208
Hpy188I	TCNGA	7 cut(s)	385, 399, 423, 571, 610, 764, 1321
Hpy188III	TCNNGA	8 cut(s)	45, 127, 183, 201, 210, 311, 1028, 1174
Hpy8I	GTNNAC	5 cut(s)	240, 622, 738, 969, 1208
Hpy99I	CGWCG	3 cut(s)	107, 695, 1307
HpyAV	CCTTC	3 cut(s)	402, 1139, 1164
HpyCH4III	ACNGT	1 cut(s)	782
HpyCH4IV	ACGT	1 cut(s)	1194
HpyCH4V	TGCA	8 cut(s)	36, 520, 558, 684, 710, 731, 1009, 1291
HpyF10VI	GCNNNNNNNGC	8 cut(s)	114, 374, 459, 1232, 1235, 1238, 1241, 1308
HpyF3I	CTNAG	4 cut(s)	24, 431, 570, 741
HpySE526I	ACGT	1 cut(s)	1194
Hsp92I	GRCGYC	2 cut(s)	147, 375
Hsp92II	CATG	3 cut(s)	1090, 1192, 1255
HspAI	GCGC	1 cut(s)	460
KflI	GGGWCCC	1 cut(s)	1125
Kpn2I	TCCGGA	1 cut(s)	209
KroI	GCCGGC	2 cut(s)	149, 1311
KroNI	GCCGGC	2 cut(s)	151, 1313
Ksp22I	TGATCA	1 cut(s)	357
Kzo9I	GATC	5 cut(s)	220, 304, 313, 357, 584
LmnI	GCTCC	5 cut(s)	121, 640, 957, 1223, 1249
LweI	GCATC	3 cut(s)	603, 740, 996
MaeII	ACGT	1 cut(s)	1194
MaeIII	GTNAC	3 cut(s)	494, 812, 980
MalI	GATC	5 cut(s)	222, 306, 315, 359, 586
MboI	GATC	5 cut(s)	220, 304, 313, 357, 584
MboII	GAAGA	7 cut(s)	110, 299, 454, 872, 1083, 1086, 1207
MhlI	GDGCHC	3 cut(s)	126, 649, 831
MluCI	AATT	5 cut(s)	48, 502, 920, 946, 1138
MlyI	GAGTC	2 cut(s)	704, 886
MmeI	TCCRAC	2 cut(s)	588, 1271
Mph1103I	ATGCAT	1 cut(s)	733
MroI	TCCGGA	1 cut(s)	209
MroNI	GCCGGC	2 cut(s)	149, 1311
MseI	TTAA	1 cut(s)	165
MspA1I	CMGCKG	3 cut(s)	371, 1052, 1283
Mva1269I	GAATGC	1 cut(s)	1315
MvaI	CCWGG	2 cut(s)	637, 941
MvnI	CGCG	1 cut(s)	462
MwoI	GCNNNNNNNGC	8 cut(s)	114, 374, 459, 1232, 1235, 1238, 1241, 1308
NaeI	GCCGGC	2 cut(s)	151, 1313
NciI	CCSGG	9 cut(s)	119, 413, 604, 626, 649, 650, 810, 928, 1001
NcoI	CCATGG	2 cut(s)	1188, 1251
NdeII	GATC	5 cut(s)	220, 304, 313, 357, 584
NgoMIV	GCCGGC	2 cut(s)	149, 1311
NlaIII	CATG	3 cut(s)	1090, 1192, 1255
NlaIV	GGNNCC	4 cut(s)	176, 269, 1126, 1127
NmeAIII	GCCGAG	1 cut(s)	1025
NmuCI	GTSAC	2 cut(s)	494, 980
NsiI	ATGCAT	1 cut(s)	733
PcsI	WCGNNNNNNNCGW	1 cut(s)	381
PctI	GAATGC	1 cut(s)	1315
PdiI	GCCGGC	2 cut(s)	151, 1313
PfeI	GAWTC	5 cut(s)	16, 186, 470, 523, 759
PfoI	TCCNGGA	1 cut(s)	411
PinAI	ACCGGT	1 cut(s)	788
PleI	GAGTC	2 cut(s)	703, 885
PpsI	GAGTC	2 cut(s)	703, 885
PpuMI	RGGWCCY	1 cut(s)	1125
Psp124BI	GAGCTC	1 cut(s)	126
Psp5II	RGGWCCY	1 cut(s)	1125
Psp6I	CCWGG	2 cut(s)	635, 939
PspEI	GGTNACC	2 cut(s)	494, 980
PspFI	CCCAGC	2 cut(s)	319, 1279
PspGI	CCWGG	2 cut(s)	635, 939
PspN4I	GGNNCC	4 cut(s)	176, 269, 1126, 1127
PspPI	GGNCC	2 cut(s)	268, 1125
PspPPI	RGGWCCY	1 cut(s)	1125
PvuII	CAGCTG	1 cut(s)	1283
RsaI	GTAC	2 cut(s)	565, 1209
RsaNI	GTAC	2 cut(s)	564, 1208
SacI	GAGCTC	1 cut(s)	126
SaqAI	TTAA	1 cut(s)	165
Sau3AI	GATC	5 cut(s)	220, 304, 313, 357, 584
Sau96I	GGNCC	2 cut(s)	268, 1125
ScaI	AGTACT	1 cut(s)	565
SchI	GAGTC	2 cut(s)	704, 886
SduI	GDGCHC	3 cut(s)	126, 649, 831
SfaNI	GCATC	3 cut(s)	603, 740, 996
SfcI	CTRYAG	1 cut(s)	75
SgrAI	CRCCGGYG	1 cut(s)	752
SinI	GGWCC	2 cut(s)	268, 1125
SmaI	CCCGGG	1 cut(s)	650
SmlI	CTYRAG	2 cut(s)	43, 125
SmoI	CTYRAG	2 cut(s)	43, 125
Sse9I	AATT	5 cut(s)	48, 502, 920, 946, 1138
SstI	GAGCTC	1 cut(s)	126
StyI	CCWWGG	3 cut(s)	663, 1188, 1251
TaaI	ACNGT	1 cut(s)	782
TaiI	ACGT	1 cut(s)	1197
TaqI	TCGA	5 cut(s)	184, 200, 468, 545, 875
TasI	AATT	5 cut(s)	48, 502, 920, 946, 1138
TatI	WGTACW	1 cut(s)	563
TauI	GCSGC	8 cut(s)	117, 371, 1055, 1065, 1104, 1232, 1235, 1241
TfiI	GAWTC	5 cut(s)	16, 186, 470, 523, 759
Tru1I	TTAA	1 cut(s)	165
Tru9I	TTAA	1 cut(s)	165
TscAI	CASTG	2 cut(s)	351, 1210
TseFI	GTSAC	2 cut(s)	494, 980
Tsp45I	GTSAC	2 cut(s)	494, 980
TspDTI	ATGAA	2 cut(s)	1131, 1207
TspGWI	ACGGA	1 cut(s)	1320
TspMI	CCCGGG	1 cut(s)	648
TspRI	CASTG	2 cut(s)	351, 1210
VpaK11BI	GGWCC	2 cut(s)	268, 1125
XapI	RAATTY	1 cut(s)	946
XcmI	CCANNNNNNNNNTGG	2 cut(s)	343, 1280
XmaI	CCCGGG	1 cut(s)	648
ZrmI	AGTACT	1 cut(s)	565
Zsp2I	ATGCAT	1 cut(s)	733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.