Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005089

Physical Location & Seq

Genomic Coordinates Reverse (-)

9942685 .. 9949515

Gene Structure 6831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG109700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGGAGGTGGAGGAGATTCAAGCTCAGCAGCCCTGCAAGTTCCCAAGAACTGGAAATGGCGGTAGAGGAAGCACTATAGTCAAGAGCCCAGATGAGGAAGACGACGGCGGCGGCGGTCGGGAGCTCAAGAGAGCTGGCGGGGGAGACGCGGGCACTAACCGGCTTAACGGGTGGCACCACTCCCGAATCATCAGGGTTTCGAGAGCCTCCGGAGGGAAAGATCGGCACAGCAAGGTGTGGACTTCAAAGGGGTTGAGGGACAGGAGGGTCCGGCTGTCGGTTCAAACCGCTATTCAATTCTACGATCTTCAAGATCGGCTGGGTTATGACCAACCCAGTAAGGCAGTGGAGTGGCTGATCAAAGCTGCGGCTGACGCCATCTCGGAGCTTCCTTCTCTGAACAGCTCGTTCCCGGACACTCCGAAGCAGCTCAGCGATGAGAAGAGGGCGAGCAGCGAGCGCGGGTTCGATTCCGTTGAGCTTGATGTAGATGGTGACCCCAATTATCACCATCAAGTGCAGAATCATCATCAGCTTTGTATGTCGAAATCTGCTTGCAGTAGTACTTCTGAGACGAGCAAGGGATCGGGGGGGCTGTCTCTGTCCCGGTCGGAGATGCGGGTGAACCGGGATAAGGCCAGGGAGCGAGCCCGGGAGAGAGCAGCCAAGGAGAAGGAGAAAGACAGCAACAGCAACAACGACGAGTCCTCCCGCATTGCACAGGCTATTTCTCAAACTGCGTCGTTTACTGAGCTTCTCACCGGCGGAATCGGAAACAACAGGAACAACAACAGTCCCAACGGCGAGCCCATTTTGTTCCACAAGGCAGCACAGCCGATGGACTACTTCGGGTCGGGTCTTCTGGGACTTTCCTCCACCCCAACCCGAAACCACCATCAATTCTCCGGCCAAATCCACCTGGGGAATTCGCTCCCCCAGACAACGTTCAGCATCTCCGGTGACCACAACCACAGCCACCCGGAGATGCAGCATTTCTCGTTTGTTCCCGACTACATCCCTGTCGTCTCGGCAGCGGCCAACGGCGGCGAATACAACCTCAACTTCTCCATGTCTTCTTCCGGCGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCATCATCATCACCATCACCATCACCTTCTCTTTTGCCTCACCTCCAGAGGTTCTCTCCCATGGACGGATCGTCCAGTGTACCTTTCTTCATCGGAGCTGCCGCCGCGGCCGCAGCTCCAACCATGGAGAATCACCAGCACCACCAGTTCCCAGCTGGATTGCAGCTCTACGGCGACGGAAGCCGGCATTCAGACCACAAGGGAAAAGCAAAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0008285 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009965 GO:0009987 GO:0010016 GO:0010099 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040034 GO:0042127 GO:0045935 GO:0045962 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000026 GO:2000030 GO:2000112 GO:2000306 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

446

Amino Acids

48.27

Weight (kDa)

7.86

Isoelectric Point (pI)

51.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	71 - 226	8e-44	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30210 AT1G30210 AT4G18390 AT4G18390
fragaria_vesca	FvH4_3g05220 FvH4_3g05220
malus_domestica	MD05G1281100.v1.1 MD10G1259500.v1.1
prunus_persica	Prupe.3G099100_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1
pyrus_communis	pycom05g10530 pycom05g26120 pycom10g21590
rosa_chinensis	RchiOBHm_Chr5g0014491
rosa_laevigata	RLG00000032116
rosa_multiflora	Rmu_sc0000441.1_g000121 Rmu_sc0017039.1_g000003
rosa_roxburghii	Rroxscaffold_1G00062060
rosa_rugosa	Rorug05G0018400 Rorug05G0018500
rosa_samantha	Rh5AG113800 Rh5BG110400 Rh5CG122300 Rh5DG109700
rosa_wichuraiana	Rw5G009870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	266, 1114
AccB1I	GGYRCC	1 cut(s)	174
AccB7I	CCANNNNNTGG	1 cut(s)	50
AccII	CGCG	3 cut(s)	149, 462, 1229
AccIII	TCCGGA	1 cut(s)	209
AclI	AACGTT	1 cut(s)	944
AclWI	GGATC	2 cut(s)	592, 1198
AcoI	YGGCCR	3 cut(s)	907, 1035, 1230
AcsI	RAATTY	1 cut(s)	925
AcuI	CTGAAG	1 cut(s)	1097
AcyI	GRCGYC	1 cut(s)	375
AfaI	GTAC	2 cut(s)	565, 1203
AfiI	CCNNNNNNNGG	6 cut(s)	50, 94, 213, 277, 634, 1187
AgsI	TTSAA	6 cut(s)	20, 246, 284, 296, 311, 1099
AhdI	GACNNNNNGTC	1 cut(s)	1192
AjnI	CCWGG	2 cut(s)	638, 918
Alw21I	GWGCWC	1 cut(s)	126
Alw26I	GTCTC	4 cut(s)	138, 566, 603, 1030
AlwI	GGATC	2 cut(s)	592, 1198
Ama87I	CYCGRG	1 cut(s)	651
Aor13HI	TCCGGA	1 cut(s)	209
AoxI	GGCC	5 cut(s)	636, 907, 1035, 1084, 1230
ApoI	RAATTY	1 cut(s)	925
AspLEI	GCGC	1 cut(s)	462
AspS9I	GGNCC	2 cut(s)	268, 1107
AsuC2I	CCSGG	6 cut(s)	413, 607, 629, 652, 653, 980
AvaI	CYCGRG	1 cut(s)	651
AvaII	GGWCC	2 cut(s)	268, 1107
BaeGI	GKGCMC	1 cut(s)	155
BanI	GGYRCC	1 cut(s)	174
BanII	GRGCYC	4 cut(s)	89, 126, 652, 810
BbsI	GAAGAC	3 cut(s)	105, 851, 1065
Bbv12I	GWGCWC	1 cut(s)	126
BccI	CCATC	7 cut(s)	386, 485, 519, 832, 903, 1144, 1150
BceAI	ACGGC	4 cut(s)	121, 817, 1057, 1309
BciT130I	CCWGG	2 cut(s)	640, 920
BclI	TGATCA	1 cut(s)	357
BcnI	CCSGG	6 cut(s)	413, 607, 629, 652, 653, 980
BcoDI	GTCTC	4 cut(s)	138, 566, 603, 1030
BfmI	CTRYAG	1 cut(s)	75
BglI	GCCNNNNNGGC	1 cut(s)	1229
BlpI	GCTNAGC	2 cut(s)	24, 431
BmcAI	AGTACT	1 cut(s)	565
Bme1390I	CCNGG	8 cut(s)	413, 607, 629, 640, 652, 653, 920, 980
Bme18I	GGWCC	2 cut(s)	268, 1107
BmeRI	GACNNNNNGTC	1 cut(s)	1192
BmeT110I	CYCGRG	1 cut(s)	651
BmgT120I	GGNCC	2 cut(s)	268, 1107
BmiI	GGNNCC	4 cut(s)	176, 269, 1108, 1109
BmrFI	CCNGG	8 cut(s)	413, 607, 629, 640, 652, 653, 920, 980
BmrI	ACTGGG	1 cut(s)	330
BmsI	GCATC	3 cut(s)	606, 960, 975
BmuI	ACTGGG	1 cut(s)	330
BpiI	GAAGAC	3 cut(s)	105, 851, 1065
BplI	GAGNNNNNCTC	2 cut(s)	1162, 1194
BpmI	CTGGAG	1 cut(s)	1151
Bpu1102I	GCTNAGC	2 cut(s)	24, 431
BpuEI	CTTGAG	1 cut(s)	110
BpuMI	CCSGG	6 cut(s)	413, 607, 629, 652, 653, 980
BsaHI	GRCGYC	1 cut(s)	375
BsaJI	CCNNGG	7 cut(s)	639, 651, 666, 919, 1182, 1227, 1245
BsaWI	WCCGGW	2 cut(s)	209, 956
BsaXI	ACNNNNNCTCC	2 cut(s)	692, 722
Bsc4I	CCNNNNNNNGG	6 cut(s)	50, 94, 213, 277, 634, 1187
Bse118I	RCCGGY	3 cut(s)	159, 761, 1305
Bse1I	ACTGG	4 cut(s)	55, 336, 1197, 1267
Bse3DI	GCAATG	1 cut(s)	714
BseAI	TCCGGA	1 cut(s)	209
BseBI	CCWGG	2 cut(s)	640, 920
BseDI	CCNNGG	7 cut(s)	639, 651, 666, 919, 1182, 1227, 1245
BseGI	GGATG	1 cut(s)	1014
BseLI	CCNNNNNNNGG	6 cut(s)	50, 94, 213, 277, 634, 1187
BseMI	GCAATG	1 cut(s)	714
BseMII	CTCAG	4 cut(s)	38, 445, 561, 741
BseNI	ACTGG	4 cut(s)	55, 336, 1197, 1267
BseRI	GAGGAG	1 cut(s)	26
BseSI	GKGCMC	1 cut(s)	155
BseX3I	CGGCCG	1 cut(s)	1230
BseYI	CCCAGC	2 cut(s)	319, 1273
BsgI	GTGCAG	1 cut(s)	539
Bsh1236I	CGCG	3 cut(s)	149, 462, 1229
Bsh1285I	CGRYCG	3 cut(s)	118, 611, 1233
BshFI	GGCC	5 cut(s)	638, 909, 1037, 1086, 1232
BshNI	GGYRCC	1 cut(s)	174
BsiEI	CGRYCG	3 cut(s)	118, 611, 1233
BsiHKAI	GWGCWC	1 cut(s)	126
BsiHKCI	CYCGRG	1 cut(s)	651
BslFI	GGGAC	5 cut(s)	272, 589, 780, 879, 1120
BslI	CCNNNNNNNGG	6 cut(s)	50, 94, 213, 277, 634, 1187
BsmAI	GTCTC	4 cut(s)	138, 566, 603, 1030
BsmBI	CGTCTC	3 cut(s)	138, 566, 1030
BsmFI	GGGAC	5 cut(s)	272, 589, 780, 879, 1120
BsmI	GAATGC	1 cut(s)	1309
BsnI	GGCC	5 cut(s)	638, 909, 1037, 1086, 1232
BsoBI	CYCGRG	1 cut(s)	651
Bsp1286I	GDGCHC	5 cut(s)	89, 126, 155, 652, 810
Bsp13I	TCCGGA	1 cut(s)	209
Bsp143I	GATC	6 cut(s)	220, 304, 313, 357, 584, 1190
Bsp1720I	GCTNAGC	2 cut(s)	24, 431
Bsp19I	CCATGG	2 cut(s)	1182, 1245
BspANI	GGCC	5 cut(s)	638, 909, 1037, 1086, 1232
BspCNI	CTCAG	4 cut(s)	37, 444, 562, 742
BspEI	TCCGGA	1 cut(s)	209
BspFNI	CGCG	3 cut(s)	149, 462, 1229
BspLI	GGNNCC	4 cut(s)	176, 269, 1108, 1109
BspPI	GGATC	2 cut(s)	592, 1198
BspT107I	GGYRCC	1 cut(s)	174
BsrDI	GCAATG	1 cut(s)	714
BsrFI	RCCGGY	3 cut(s)	159, 761, 1305
BsrI	ACTGG	4 cut(s)	55, 336, 1197, 1267
BssAI	RCCGGY	3 cut(s)	159, 761, 1305
BssECI	CCNNGG	7 cut(s)	639, 651, 666, 919, 1182, 1227, 1245
BssMI	GATC	6 cut(s)	220, 304, 313, 357, 584, 1190
BssNI	GRCGYC	1 cut(s)	375
BssT1I	CCWWGG	3 cut(s)	666, 1182, 1245
Bst2UI	CCWGG	2 cut(s)	640, 920
Bst4CI	ACNGT	1 cut(s)	794
Bst6I	CTCTTC	1 cut(s)	437
BstACI	GRCGYC	1 cut(s)	375
BstC8I	GCNNGC	8 cut(s)	136, 151, 451, 458, 556, 648, 806, 1307
BstDEI	CTNAG	4 cut(s)	24, 431, 570, 750
BstDSI	CCRYGG	3 cut(s)	1182, 1227, 1245
BstEII	GGTNACC	2 cut(s)	494, 959
BstF5I	GGATG	1 cut(s)	1014
BstFNI	CGCG	3 cut(s)	149, 462, 1229
BstHHI	GCGC	1 cut(s)	462
BstKTI	GATC	6 cut(s)	223, 307, 316, 360, 587, 1193
BstMAI	GTCTC	4 cut(s)	138, 566, 603, 1030
BstMBI	GATC	6 cut(s)	220, 304, 313, 357, 584, 1190
BstMCI	CGRYCG	3 cut(s)	118, 611, 1233
BstMWI	GCNNNNNNNGC	7 cut(s)	374, 459, 1226, 1229, 1232, 1235, 1302
BstNI	CCWGG	2 cut(s)	640, 920
BstPI	GGTNACC	2 cut(s)	494, 959
BstSCI	CCNGG	8 cut(s)	411, 605, 627, 638, 650, 651, 918, 978
BstSFI	CTRYAG	1 cut(s)	75
BstSLI	GKGCMC	1 cut(s)	155
BstUI	CGCG	3 cut(s)	149, 462, 1229
BstV2I	GAAGAC	3 cut(s)	105, 851, 1065
BstZI	CGGCCG	1 cut(s)	1230
BsuRI	GGCC	5 cut(s)	638, 909, 1037, 1086, 1232
BtgI	CCRYGG	3 cut(s)	1182, 1227, 1245
BtgZI	GCGATG	1 cut(s)	450
BtsCI	GGATG	1 cut(s)	1014
BtsI	GCAGTG	1 cut(s)	351
BtsIMutI	CAGTG	2 cut(s)	351, 1204
Cac8I	GCNNGC	8 cut(s)	136, 151, 451, 458, 556, 648, 806, 1307
CciNI	GCGGCCGC	1 cut(s)	1230
CfoI	GCGC	1 cut(s)	462
Cfr10I	RCCGGY	3 cut(s)	159, 761, 1305
Cfr13I	GGNCC	2 cut(s)	268, 1107
Cfr42I	CCGCGG	1 cut(s)	1230
Cfr9I	CCCGGG	1 cut(s)	651
CseI	GACGC	3 cut(s)	155, 383, 729
Csp6I	GTAC	2 cut(s)	564, 1202
CviAII	CATG	3 cut(s)	1069, 1183, 1246
CviQI	GTAC	2 cut(s)	564, 1202
DdeI	CTNAG	4 cut(s)	24, 431, 570, 750
DpnI	GATC	6 cut(s)	222, 306, 315, 359, 586, 1192
DpnII	GATC	6 cut(s)	220, 304, 313, 357, 584, 1190
DrdI	GACNNNNNNGTC	2 cut(s)	266, 1114
DriI	GACNNNNNGTC	1 cut(s)	1192
DseDI	GACNNNNNNGTC	2 cut(s)	266, 1114
EaeI	YGGCCR	3 cut(s)	907, 1035, 1230
EagI	CGGCCG	1 cut(s)	1230
Eam1104I	CTCTTC	1 cut(s)	437
Eam1105I	GACNNNNNGTC	1 cut(s)	1192
EarI	CTCTTC	1 cut(s)	437
EciI	GGCGGA	1 cut(s)	780
Ecl136II	GAGCTC	1 cut(s)	124
EclXI	CGGCCG	1 cut(s)	1230
Eco130I	CCWWGG	3 cut(s)	666, 1182, 1245
Eco24I	GRGCYC	4 cut(s)	89, 126, 652, 810
Eco47I	GGWCC	2 cut(s)	268, 1107
Eco52I	CGGCCG	1 cut(s)	1230
Eco53kI	GAGCTC	1 cut(s)	124
Eco57I	CTGAAG	1 cut(s)	1097
Eco88I	CYCGRG	1 cut(s)	651
Eco91I	GGTNACC	2 cut(s)	494, 959
EcoICRI	GAGCTC	1 cut(s)	124
EcoO109I	RGGNCCY	1 cut(s)	1107
EcoO65I	GGTNACC	2 cut(s)	494, 959
EcoRI	GAATTC	1 cut(s)	925
EcoRII	CCWGG	2 cut(s)	638, 918
EcoT14I	CCWWGG	3 cut(s)	666, 1182, 1245
EcoT38I	GRGCYC	4 cut(s)	89, 126, 652, 810
ErhI	CCWWGG	3 cut(s)	666, 1182, 1245
Esp3I	CGTCTC	3 cut(s)	138, 566, 1030
FaeI	CATG	3 cut(s)	1072, 1186, 1249
FaiI	YATR	6 cut(s)	77, 327, 542, 1070, 1184, 1247
FaqI	GGGAC	5 cut(s)	272, 589, 780, 879, 1120
FatI	CATG	3 cut(s)	1068, 1182, 1245
FauI	CCCGC	5 cut(s)	131, 142, 455, 612, 719
FbaI	TGATCA	1 cut(s)	357
FokI	GGATG	1 cut(s)	1001
FriOI	GRGCYC	4 cut(s)	89, 126, 652, 810
GlaI	GCGC	1 cut(s)	461
GsaI	CCCAGC	2 cut(s)	323, 1277
GsuI	CTGGAG	1 cut(s)	1151
HaeIII	GGCC	5 cut(s)	638, 909, 1037, 1086, 1232
HgaI	GACGC	3 cut(s)	155, 383, 729
HhaI	GCGC	1 cut(s)	462
Hin1I	GRCGYC	1 cut(s)	375
Hin1II	CATG	3 cut(s)	1072, 1186, 1249
Hin6I	GCGC	1 cut(s)	460
HinP1I	GCGC	1 cut(s)	460
HinfI	GANTC	7 cut(s)	16, 186, 470, 523, 704, 768, 1252
Hpy166II	GTNNAC	4 cut(s)	240, 625, 747, 1202
Hpy188I	TCNGA	8 cut(s)	385, 399, 423, 571, 613, 773, 1217, 1315
Hpy188III	TCNNGA	9 cut(s)	82, 119, 127, 183, 201, 210, 311, 1007, 1168
Hpy8I	GTNNAC	4 cut(s)	240, 625, 747, 1202
Hpy99I	CGWCG	4 cut(s)	107, 704, 745, 1301
HpyAV	CCTTC	4 cut(s)	402, 667, 1121, 1158
HpyCH4III	ACNGT	1 cut(s)	794
HpyCH4IV	ACGT	1 cut(s)	944
HpyCH4V	TGCA	6 cut(s)	36, 520, 558, 719, 988, 1285
HpyF10VI	GCNNNNNNNGC	7 cut(s)	374, 459, 1226, 1229, 1232, 1235, 1302
HpyF3I	CTNAG	4 cut(s)	24, 431, 570, 750
HpySE526I	ACGT	1 cut(s)	944
Hsp92I	GRCGYC	1 cut(s)	375
Hsp92II	CATG	3 cut(s)	1072, 1186, 1249
HspAI	GCGC	1 cut(s)	460
KflI	GGGWCCC	1 cut(s)	1107
Kpn2I	TCCGGA	1 cut(s)	209
KroI	GCCGGC	1 cut(s)	1305
KroNI	GCCGGC	1 cut(s)	1307
Ksp22I	TGATCA	1 cut(s)	357
KspI	CCGCGG	1 cut(s)	1230
Kzo9I	GATC	6 cut(s)	220, 304, 313, 357, 584, 1190
LmnI	GCTCC	6 cut(s)	121, 385, 643, 936, 1217, 1243
LweI	GCATC	3 cut(s)	606, 960, 975
MaeII	ACGT	1 cut(s)	944
MaeIII	GTNAC	2 cut(s)	494, 959
MalI	GATC	6 cut(s)	222, 306, 315, 359, 586, 1192
MboI	GATC	6 cut(s)	220, 304, 313, 357, 584, 1190
MboII	GAAGA	7 cut(s)	110, 299, 454, 851, 1065, 1068, 1201
MhlI	GDGCHC	5 cut(s)	89, 126, 155, 652, 810
MluCI	AATT	5 cut(s)	296, 502, 899, 925, 1120
MlyI	GAGTC	1 cut(s)	713
MmeI	TCCRAC	2 cut(s)	591, 1265
MroI	TCCGGA	1 cut(s)	209
MroNI	GCCGGC	1 cut(s)	1305
MseI	TTAA	1 cut(s)	165
MspA1I	CMGCKG	3 cut(s)	1034, 1229, 1277
MspR9I	CCNGG	8 cut(s)	413, 607, 629, 640, 652, 653, 920, 980
Mva1269I	GAATGC	1 cut(s)	1309
MvaI	CCWGG	2 cut(s)	640, 920
MvnI	CGCG	3 cut(s)	149, 462, 1229
MwoI	GCNNNNNNNGC	7 cut(s)	374, 459, 1226, 1229, 1232, 1235, 1302
NaeI	GCCGGC	1 cut(s)	1307
NciI	CCSGG	6 cut(s)	413, 607, 629, 652, 653, 980
NcoI	CCATGG	2 cut(s)	1182, 1245
NdeII	GATC	6 cut(s)	220, 304, 313, 357, 584, 1190
NgoMIV	GCCGGC	1 cut(s)	1305
NlaIII	CATG	3 cut(s)	1072, 1186, 1249
NlaIV	GGNNCC	4 cut(s)	176, 269, 1108, 1109
NmeAIII	GCCGAG	1 cut(s)	1007
NmuCI	GTSAC	2 cut(s)	494, 959
NotI	GCGGCCGC	1 cut(s)	1230
PctI	GAATGC	1 cut(s)	1309
PdiI	GCCGGC	1 cut(s)	1307
PfeI	GAWTC	6 cut(s)	16, 186, 470, 523, 768, 1252
PflMI	CCANNNNNTGG	1 cut(s)	50
PfoI	TCCNGGA	1 cut(s)	411
PleI	GAGTC	1 cut(s)	712
PpsI	GAGTC	1 cut(s)	712
PpuMI	RGGWCCY	1 cut(s)	1107
Psp124BI	GAGCTC	1 cut(s)	126
Psp1406I	AACGTT	1 cut(s)	944
Psp5II	RGGWCCY	1 cut(s)	1107
Psp6I	CCWGG	2 cut(s)	638, 918
PspEI	GGTNACC	2 cut(s)	494, 959
PspFI	CCCAGC	2 cut(s)	319, 1273
PspGI	CCWGG	2 cut(s)	638, 918
PspN4I	GGNNCC	4 cut(s)	176, 269, 1108, 1109
PspPI	GGNCC	2 cut(s)	268, 1107
PspPPI	RGGWCCY	1 cut(s)	1107
PvuII	CAGCTG	1 cut(s)	1277
RsaI	GTAC	2 cut(s)	565, 1203
RsaNI	GTAC	2 cut(s)	564, 1202
SacI	GAGCTC	1 cut(s)	126
SacII	CCGCGG	1 cut(s)	1230
SaqAI	TTAA	1 cut(s)	165
Sau3AI	GATC	6 cut(s)	220, 304, 313, 357, 584, 1190
Sau96I	GGNCC	2 cut(s)	268, 1107
ScaI	AGTACT	1 cut(s)	565
SchI	GAGTC	1 cut(s)	713
ScrFI	CCNGG	8 cut(s)	413, 607, 629, 640, 652, 653, 920, 980
SduI	GDGCHC	5 cut(s)	89, 126, 155, 652, 810
SfaNI	GCATC	3 cut(s)	606, 960, 975
SfcI	CTRYAG	1 cut(s)	75
Sfr303I	CCGCGG	1 cut(s)	1230
SgrAI	CRCCGGYG	1 cut(s)	761
SgrBI	CCGCGG	1 cut(s)	1230
SinI	GGWCC	2 cut(s)	268, 1107
SmaI	CCCGGG	1 cut(s)	653
SmlI	CTYRAG	1 cut(s)	125
SmoI	CTYRAG	1 cut(s)	125
Sse9I	AATT	5 cut(s)	296, 502, 899, 925, 1120
SstI	GAGCTC	1 cut(s)	126
StyD4I	CCNGG	8 cut(s)	411, 605, 627, 638, 650, 651, 918, 978
StyI	CCWWGG	3 cut(s)	666, 1182, 1245
TaaI	ACNGT	1 cut(s)	794
TaiI	ACGT	1 cut(s)	947
TaqI	TCGA	3 cut(s)	200, 468, 545
TasI	AATT	5 cut(s)	296, 502, 899, 925, 1120
TatI	WGTACW	1 cut(s)	563
TfiI	GAWTC	6 cut(s)	16, 186, 470, 523, 768, 1252
Tru1I	TTAA	1 cut(s)	165
Tru9I	TTAA	1 cut(s)	165
TscAI	CASTG	2 cut(s)	351, 1204
TseFI	GTSAC	2 cut(s)	494, 959
Tsp45I	GTSAC	2 cut(s)	494, 959
TspDTI	ATGAA	2 cut(s)	1113, 1201
TspGWI	ACGGA	3 cut(s)	463, 1203, 1314
TspMI	CCCGGG	1 cut(s)	651
TspRI	CASTG	2 cut(s)	351, 1204
Van91I	CCANNNNNTGG	1 cut(s)	50
VpaK11BI	GGWCC	2 cut(s)	268, 1107
XapI	RAATTY	1 cut(s)	925
XcmI	CCANNNNNNNNNTGG	2 cut(s)	343, 1274
XmaI	CCCGGG	1 cut(s)	651
ZrmI	AGTACT	1 cut(s)	565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.