Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0005089

Physical Location & Seq

Genomic Coordinates Reverse (-)

10134932 .. 10143006

Gene Structure 8075 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG122300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGAGGTGGAGGAGATTCAAGCTCAGCAGCCCCGCAAGTTCCCAAGAATTGGAAATGGCGGTAGAGGAAGCACTATAGTCAAGAGCCCAGATGAGGAAGAAGACGGCGGTCGGGAGCTCAAGAGAGCTGGCGGGGGAGACGCGGGCACTAACCGGCTTAACGGGTGGCACCACTCTCGAATCATCAGGGTTTCGAGAGCCTCCGGAGGGAAAGATCGGCACAGCAAGGTGTGGACTTCAAAGGGGTTGAGGGACAGGAGGGTCCGGCTGTCGGTTACAACCGCTATTCAATTCTACGATCTTCAAGATCGGCTGGGTTATGACCAACCCAGTAAGGCAGTGGAGTGGCTGATCAAGGCTGCGGCTGACGCCATCGCGGAGCTTCCTTCTCTGAACAGCTCGTTCCCCGACACTCCGAAGCAGCTCAGCGATGAGAAGAGGGCGAGCAGCGAGCGCGGGTTCGATTCCGTTGAGCTTGATGTAGATGGTGACCCCAATTATCACCATCAAGTGCAGAATCATCATCAGCTTTGTATGTCGAAATCTGCCTGCAGTAGTACTTCTGAGACGAGCAAGGGATCGGGGGGGCTGTCTCTGTCCCGGTCGGAGATGCGGGTGAACCGGGATAAGGCCAGGGAGCGAGCCCGGGAGAGAGCAGCCAAGGAGAAGGAGAAAGACAGCAACAACGACGAGTCCTCCCGCATTGCACAGGCTATTTCTCAAAATGCATCGTTTACTGAGCTTCTCACCGGCGGAATCGGAAACAACAGGAACAACAGTCCCACCGGTCATCAGCAGAACAATCCCAACGGCGAGCCCATTTTGTTCCACAAGGCAGCACCACCGATGGACTACTTCGGGTCGAGTCTTCTGGGACTTTCCTCCACCCCAACCCGAAACCACCATCAATTCTCCGGGCAAATCCACCTGGGGAATTCGCTCCCCCAGACAATGTTCAGCATCTCCGGTGACCACAACCACAGCCACCCGGAGATGCAGCATTTCTCGTTTGTTCCCGACTACATCCCTGTCTCGGCAGCGGCCAACGGCGGCGAATACAACCTCAACTTCTCCATGTCTTCTTCCGGCGGCCTTGCTGAGGTTCTCTCCCATGGACGGATCGTCCAGTGTACCTTTCTTCATCGGAGCTGCCGCCGCAGCCGCAGCTCCAACCATGGAGAACCACCAGTTCCCAGCTGGATTGCAGCTCTACGGCGACGGAAGCCGGCATTCAGACCACAAGGGAAAAGCAAAGAACTGATCTTTTTTCTGAAAACTGAAGCGAAAGAAGTAATGACAAGCTGCAAGATAGTGGGCAAATCGGTTGTGGGCTTCTTCGAGGCAGTTGCAGTAGCAGAGAGCGTGGATGACGCTGCTGAGGTTGAGCAGGTCAGGGCGGTAGCCACAGAGGCGAATGTGGTCGAGGAGATGGAGGGCTTGGTCGACATTGCGGTGGCAGGTGCAGAAGAAGAAGAAGATTGCAAGGACCTGATCGGCTGTGGGAGAAGAAAACGAAGGATCAGTGCGATCAGGTTTGTCGATGGAGCTGGAGAAGAGCAGTTAGACGAGGCGTCGTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0008285 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009965 GO:0009987 GO:0010016 GO:0010099 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040034 GO:0042127 GO:0045935 GO:0045962 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000026 GO:2000030 GO:2000112 GO:2000306 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

526

Amino Acids

57.65

Weight (kDa)

6.69

Isoelectric Point (pI)

51.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	69 - 224	1.6e-43	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30210 AT1G30210 AT4G18390 AT4G18390
fragaria_vesca	FvH4_3g05220 FvH4_3g05220
malus_domestica	MD05G1281100.v1.1 MD10G1259500.v1.1
prunus_persica	Prupe.3G099100_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1 Prupe.4G083500_v2.0.a1
pyrus_communis	pycom05g10530 pycom05g26120 pycom10g21590
rosa_chinensis	RchiOBHm_Chr5g0014491
rosa_laevigata	RLG00000032116
rosa_multiflora	Rmu_sc0000441.1_g000121 Rmu_sc0017039.1_g000003
rosa_roxburghii	Rroxscaffold_1G00062060
rosa_rugosa	Rorug05G0018400 Rorug05G0018500
rosa_samantha	Rh5AG113800 Rh5BG110400 Rh5CG122300 Rh5DG109700
rosa_wichuraiana	Rw5G009870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1448
AasI	GACNNNNNNGTC	1 cut(s)	260
Acc36I	ACCTGC	2 cut(s)	1378, 1448
AccB1I	GGYRCC	1 cut(s)	168
AccB7I	CCANNNNNTGG	1 cut(s)	50
AccI	GTMKAC	1 cut(s)	1443
AccII	CGCG	3 cut(s)	143, 377, 456
AccIII	TCCGGA	1 cut(s)	203
AclWI	GGATC	3 cut(s)	586, 1127, 1526
AcoI	YGGCCR	1 cut(s)	1041
AcsI	RAATTY	1 cut(s)	934
AcuI	CTGAAG	1 cut(s)	1299
AcyI	GRCGYC	2 cut(s)	369, 1571
AfaI	GTAC	2 cut(s)	559, 1132
AfiI	CCNNNNNNNGG	8 cut(s)	50, 94, 207, 271, 628, 1033, 1099, 1116
AgeI	ACCGGT	1 cut(s)	785
AgsI	TTSAA	4 cut(s)	20, 240, 290, 305
AhdI	GACNNNNNGTC	2 cut(s)	1121, 1570
AjnI	CCWGG	2 cut(s)	632, 927
Alw21I	GWGCWC	1 cut(s)	120
Alw26I	GTCTC	4 cut(s)	132, 560, 597, 1036
AlwI	GGATC	3 cut(s)	586, 1127, 1526
Ama87I	CYCGRG	1 cut(s)	645
Aor13HI	TCCGGA	1 cut(s)	203
AoxI	GGCC	3 cut(s)	630, 1041, 1090
ApoI	RAATTY	1 cut(s)	934
AsiGI	ACCGGT	1 cut(s)	785
AspLEI	GCGC	1 cut(s)	456
AspS9I	GGNCC	2 cut(s)	262, 1486
AsuC2I	CCSGG	6 cut(s)	601, 623, 646, 647, 916, 989
AsuHPI	GGTGA	5 cut(s)	494, 500, 628, 739, 980
AvaI	CYCGRG	1 cut(s)	645
AvaII	GGWCC	2 cut(s)	262, 1486
BaeGI	GKGCMC	1 cut(s)	149
BanI	GGYRCC	1 cut(s)	168
BanII	GRGCYC	4 cut(s)	89, 120, 646, 819
BbsI	GAAGAC	3 cut(s)	108, 860, 1071
Bbv12I	GWGCWC	1 cut(s)	120
BbvCI	CCTCAGC	2 cut(s)	1098, 1377
BccI	CCATC	7 cut(s)	380, 479, 513, 841, 912, 1423, 1535
BceAI	ACGGC	4 cut(s)	121, 826, 1063, 1229
BcgI	CGANNNNNNTGC	4 cut(s)	158, 192, 1328, 1362
BciT130I	CCWGG	2 cut(s)	634, 929
BclI	TGATCA	1 cut(s)	351
BcnI	CCSGG	6 cut(s)	601, 623, 646, 647, 916, 989
BcoDI	GTCTC	4 cut(s)	132, 560, 597, 1036
BfmI	CTRYAG	2 cut(s)	75, 550
BfuAI	ACCTGC	2 cut(s)	1378, 1448
BglI	GCCNNNNNGGC	1 cut(s)	1409
BlpI	GCTNAGC	2 cut(s)	24, 425
BmcAI	AGTACT	1 cut(s)	559
Bme1390I	CCNGG	8 cut(s)	601, 623, 634, 646, 647, 916, 929, 989
Bme18I	GGWCC	2 cut(s)	262, 1486
BmeRI	GACNNNNNGTC	2 cut(s)	1121, 1570
BmeT110I	CYCGRG	1 cut(s)	645
BmgT120I	GGNCC	2 cut(s)	262, 1486
BmiI	GGNNCC	2 cut(s)	170, 263
BmrFI	CCNGG	8 cut(s)	601, 623, 634, 646, 647, 916, 929, 989
BmrI	ACTGGG	1 cut(s)	324
BmsI	GCATC	4 cut(s)	600, 737, 969, 984
BmuI	ACTGGG	1 cut(s)	324
BoxI	GACNNNNGTC	1 cut(s)	108
BpiI	GAAGAC	3 cut(s)	108, 860, 1071
BplI	GAGNNNNNCTC	2 cut(s)	1091, 1123
BpmI	CTGGAG	1 cut(s)	1569
Bpu10I	CCTNAGC	2 cut(s)	1098, 1377
Bpu1102I	GCTNAGC	2 cut(s)	24, 425
BpuEI	CTTGAG	1 cut(s)	104
BpuMI	CCSGG	6 cut(s)	601, 623, 646, 647, 916, 989
BsaHI	GRCGYC	2 cut(s)	369, 1571
BsaJI	CCNNGG	6 cut(s)	633, 645, 660, 928, 1111, 1174
BsaWI	WCCGGW	3 cut(s)	203, 785, 965
BsaXI	ACNNNNNCTCC	2 cut(s)	680, 710
Bsc4I	CCNNNNNNNGG	8 cut(s)	50, 94, 207, 271, 628, 1033, 1099, 1116
Bse118I	RCCGGY	4 cut(s)	153, 749, 785, 1225
Bse1I	ACTGG	3 cut(s)	330, 1126, 1187
Bse3DI	GCAATG	2 cut(s)	702, 1446
BseAI	TCCGGA	1 cut(s)	203
BseBI	CCWGG	2 cut(s)	634, 929
BseDI	CCNNGG	6 cut(s)	633, 645, 660, 928, 1111, 1174
BseGI	GGATG	2 cut(s)	1023, 1372
BseLI	CCNNNNNNNGG	8 cut(s)	50, 94, 207, 271, 628, 1033, 1099, 1116
BseMI	GCAATG	2 cut(s)	702, 1446
BseMII	CTCAG	6 cut(s)	38, 439, 555, 729, 1089, 1368
BseNI	ACTGG	3 cut(s)	330, 1126, 1187
BseRI	GAGGAG	2 cut(s)	26, 1439
BseSI	GKGCMC	1 cut(s)	149
BseYI	CCCAGC	2 cut(s)	313, 1193
BsgI	GTGCAG	2 cut(s)	533, 1482
Bsh1236I	CGCG	3 cut(s)	143, 377, 456
Bsh1285I	CGRYCG	2 cut(s)	112, 605
BshFI	GGCC	3 cut(s)	632, 1043, 1092
BshNI	GGYRCC	1 cut(s)	168
BshTI	ACCGGT	1 cut(s)	785
BsiEI	CGRYCG	2 cut(s)	112, 605
BsiHKAI	GWGCWC	1 cut(s)	120
BsiHKCI	CYCGRG	1 cut(s)	645
BslFI	GGGAC	4 cut(s)	266, 583, 765, 888
BslI	CCNNNNNNNGG	8 cut(s)	50, 94, 207, 271, 628, 1033, 1099, 1116
BsmAI	GTCTC	4 cut(s)	132, 560, 597, 1036
BsmBI	CGTCTC	2 cut(s)	132, 560
BsmFI	GGGAC	4 cut(s)	266, 583, 765, 888
BsmI	GAATGC	1 cut(s)	1229
BsnI	GGCC	3 cut(s)	632, 1043, 1092
BsoBI	CYCGRG	1 cut(s)	645
Bsp1286I	GDGCHC	5 cut(s)	89, 120, 149, 646, 819
Bsp13I	TCCGGA	1 cut(s)	203
Bsp1720I	GCTNAGC	2 cut(s)	24, 425
Bsp19I	CCATGG	2 cut(s)	1111, 1174
BspANI	GGCC	3 cut(s)	632, 1043, 1092
BspCNI	CTCAG	6 cut(s)	37, 438, 556, 730, 1090, 1369
BspEI	TCCGGA	1 cut(s)	203
BspFNI	CGCG	3 cut(s)	143, 377, 456
BspLI	GGNNCC	2 cut(s)	170, 263
BspMAI	CTGCAG	1 cut(s)	554
BspMI	ACCTGC	2 cut(s)	1378, 1448
BspPI	GGATC	3 cut(s)	586, 1127, 1526
BspQI	GCTCTTC	1 cut(s)	1548
BspT107I	GGYRCC	1 cut(s)	168
BsrDI	GCAATG	2 cut(s)	702, 1446
BsrFI	RCCGGY	4 cut(s)	153, 749, 785, 1225
BsrI	ACTGG	3 cut(s)	330, 1126, 1187
BssAI	RCCGGY	4 cut(s)	153, 749, 785, 1225
BssECI	CCNNGG	6 cut(s)	633, 645, 660, 928, 1111, 1174
BssNI	GRCGYC	2 cut(s)	369, 1571
BssT1I	CCWWGG	3 cut(s)	660, 1111, 1174
Bst2UI	CCWGG	2 cut(s)	634, 929
Bst4CI	ACNGT	1 cut(s)	779
Bst6I	CTCTTC	2 cut(s)	431, 1548
BstACI	GRCGYC	2 cut(s)	369, 1571
BstC8I	GCNNGC	8 cut(s)	130, 145, 445, 452, 550, 642, 815, 1227
BstDEI	CTNAG	6 cut(s)	24, 425, 564, 738, 1098, 1377
BstDSI	CCRYGG	2 cut(s)	1111, 1174
BstEII	GGTNACC	2 cut(s)	488, 968
BstENI	CCTNNNNNAGG	1 cut(s)	1097
BstF5I	GGATG	2 cut(s)	1023, 1372
BstFNI	CGCG	3 cut(s)	143, 377, 456
BstHHI	GCGC	1 cut(s)	456
BstMAI	GTCTC	4 cut(s)	132, 560, 597, 1036
BstMCI	CGRYCG	2 cut(s)	112, 605
BstMWI	GCNNNNNNNGC	8 cut(s)	368, 453, 1155, 1158, 1161, 1164, 1222, 1409
BstNI	CCWGG	2 cut(s)	634, 929
BstPAI	GACNNNNGTC	1 cut(s)	108
BstPI	GGTNACC	2 cut(s)	488, 968
BstSCI	CCNGG	8 cut(s)	599, 621, 632, 644, 645, 914, 927, 987
BstSFI	CTRYAG	2 cut(s)	75, 550
BstSLI	GKGCMC	1 cut(s)	149
BstUI	CGCG	3 cut(s)	143, 377, 456
BstV2I	GAAGAC	3 cut(s)	108, 860, 1071
BsuRI	GGCC	3 cut(s)	632, 1043, 1092
BtgI	CCRYGG	2 cut(s)	1111, 1174
BtgZI	GCGATG	2 cut(s)	358, 444
BtsCI	GGATG	2 cut(s)	1023, 1372
BtsI	GCAGTG	1 cut(s)	345
BtsIMutI	CAGTG	3 cut(s)	345, 1133, 1528
BveI	ACCTGC	2 cut(s)	1378, 1448
Cac8I	GCNNGC	8 cut(s)	130, 145, 445, 452, 550, 642, 815, 1227
CfoI	GCGC	1 cut(s)	456
Cfr10I	RCCGGY	4 cut(s)	153, 749, 785, 1225
Cfr13I	GGNCC	2 cut(s)	262, 1486
Cfr9I	CCCGGG	1 cut(s)	645
CseI	GACGC	4 cut(s)	149, 377, 1379, 1560
Csp6I	GTAC	2 cut(s)	558, 1131
CspAI	ACCGGT	1 cut(s)	785
CviAII	CATG	3 cut(s)	1075, 1112, 1175
CviQI	GTAC	2 cut(s)	558, 1131
DdeI	CTNAG	6 cut(s)	24, 425, 564, 738, 1098, 1377
DrdI	GACNNNNNNGTC	1 cut(s)	260
DriI	GACNNNNNGTC	2 cut(s)	1121, 1570
DseDI	GACNNNNNNGTC	1 cut(s)	260
EaeI	YGGCCR	1 cut(s)	1041
Eam1104I	CTCTTC	2 cut(s)	431, 1548
Eam1105I	GACNNNNNGTC	2 cut(s)	1121, 1570
EarI	CTCTTC	2 cut(s)	431, 1548
EciI	GGCGGA	1 cut(s)	768
Ecl136II	GAGCTC	1 cut(s)	118
Eco130I	CCWWGG	3 cut(s)	660, 1111, 1174
Eco24I	GRGCYC	4 cut(s)	89, 120, 646, 819
Eco47I	GGWCC	2 cut(s)	262, 1486
Eco53kI	GAGCTC	1 cut(s)	118
Eco57I	CTGAAG	1 cut(s)	1299
Eco88I	CYCGRG	1 cut(s)	645
Eco91I	GGTNACC	2 cut(s)	488, 968
EcoICRI	GAGCTC	1 cut(s)	118
EcoNI	CCTNNNNNAGG	1 cut(s)	1097
EcoO109I	RGGNCCY	1 cut(s)	1486
EcoO65I	GGTNACC	2 cut(s)	488, 968
EcoRI	GAATTC	1 cut(s)	934
EcoRII	CCWGG	2 cut(s)	632, 927
EcoT14I	CCWWGG	3 cut(s)	660, 1111, 1174
EcoT22I	ATGCAT	1 cut(s)	730
EcoT38I	GRGCYC	4 cut(s)	89, 120, 646, 819
ErhI	CCWWGG	3 cut(s)	660, 1111, 1174
Esp3I	CGTCTC	2 cut(s)	132, 560
FaeI	CATG	3 cut(s)	1078, 1115, 1178
FaiI	YATR	6 cut(s)	77, 321, 536, 1076, 1113, 1176
FaqI	GGGAC	4 cut(s)	266, 583, 765, 888
FatI	CATG	3 cut(s)	1074, 1111, 1174
FauI	CCCGC	6 cut(s)	41, 125, 136, 449, 606, 707
FbaI	TGATCA	1 cut(s)	351
FblI	GTMKAC	1 cut(s)	1443
FokI	GGATG	2 cut(s)	1010, 1379
FriOI	GRGCYC	4 cut(s)	89, 120, 646, 819
GlaI	GCGC	1 cut(s)	455
GsaI	CCCAGC	2 cut(s)	317, 1197
GsuI	CTGGAG	1 cut(s)	1569
HaeIII	GGCC	3 cut(s)	632, 1043, 1092
HgaI	GACGC	4 cut(s)	149, 377, 1379, 1560
HhaI	GCGC	1 cut(s)	456
Hin1I	GRCGYC	2 cut(s)	369, 1571
Hin1II	CATG	3 cut(s)	1078, 1115, 1178
Hin6I	GCGC	1 cut(s)	454
HinP1I	GCGC	1 cut(s)	454
HincII	GTYRAC	1 cut(s)	1444
HindII	GTYRAC	1 cut(s)	1444
HinfI	GANTC	7 cut(s)	16, 180, 464, 517, 692, 756, 865
HphI	GGTGA	5 cut(s)	494, 500, 628, 739, 980
Hpy166II	GTNNAC	5 cut(s)	234, 619, 735, 1131, 1444
Hpy188I	TCNGA	8 cut(s)	393, 417, 565, 607, 761, 1146, 1235, 1272
Hpy188III	TCNNGA	8 cut(s)	82, 113, 121, 177, 195, 204, 305, 1016
Hpy8I	GTNNAC	5 cut(s)	234, 619, 735, 1131, 1444
Hpy99I	CGWCG	4 cut(s)	692, 1221, 1576, 1579
HpyAV	CCTTC	3 cut(s)	396, 661, 1509
HpyCH4III	ACNGT	1 cut(s)	779
HpyF10VI	GCNNNNNNNGC	8 cut(s)	368, 453, 1155, 1158, 1161, 1164, 1222, 1409
HpyF3I	CTNAG	6 cut(s)	24, 425, 564, 738, 1098, 1377
Hsp92I	GRCGYC	2 cut(s)	369, 1571
Hsp92II	CATG	3 cut(s)	1078, 1115, 1178
HspAI	GCGC	1 cut(s)	454
Kpn2I	TCCGGA	1 cut(s)	203
KroI	GCCGGC	1 cut(s)	1225
KroNI	GCCGGC	1 cut(s)	1227
Ksp22I	TGATCA	1 cut(s)	351
LguI	GCTCTTC	1 cut(s)	1548
LmnI	GCTCC	7 cut(s)	115, 379, 637, 945, 1146, 1172, 1544
LweI	GCATC	4 cut(s)	600, 737, 969, 984
MaeIII	GTNAC	3 cut(s)	274, 488, 968
MhlI	GDGCHC	5 cut(s)	89, 120, 149, 646, 819
MluCI	AATT	5 cut(s)	48, 290, 496, 908, 934
MlyI	GAGTC	2 cut(s)	701, 874
MmeI	TCCRAC	2 cut(s)	585, 1194
Mph1103I	ATGCAT	1 cut(s)	730
MroI	TCCGGA	1 cut(s)	203
MroNI	GCCGGC	1 cut(s)	1225
MseI	TTAA	1 cut(s)	159
MslI	CAYNNNNRTG	1 cut(s)	1451
MspA1I	CMGCKG	2 cut(s)	1040, 1197
MspR9I	CCNGG	8 cut(s)	601, 623, 634, 646, 647, 916, 929, 989
Mva1269I	GAATGC	1 cut(s)	1229
MvaI	CCWGG	2 cut(s)	634, 929
MvnI	CGCG	3 cut(s)	143, 377, 456
MwoI	GCNNNNNNNGC	8 cut(s)	368, 453, 1155, 1158, 1161, 1164, 1222, 1409
NaeI	GCCGGC	1 cut(s)	1227
NciI	CCSGG	6 cut(s)	601, 623, 646, 647, 916, 989
NcoI	CCATGG	2 cut(s)	1111, 1174
NgoMIV	GCCGGC	1 cut(s)	1225
NlaIII	CATG	3 cut(s)	1078, 1115, 1178
NlaIV	GGNNCC	2 cut(s)	170, 263
NmeAIII	GCCGAG	1 cut(s)	1013
NmuCI	GTSAC	2 cut(s)	488, 968
NsiI	ATGCAT	1 cut(s)	730
PaqCI	CACCTGC	1 cut(s)	1448
PciSI	GCTCTTC	1 cut(s)	1548
PctI	GAATGC	1 cut(s)	1229
PdiI	GCCGGC	1 cut(s)	1227
PfeI	GAWTC	5 cut(s)	16, 180, 464, 517, 756
PflMI	CCANNNNNTGG	1 cut(s)	50
PinAI	ACCGGT	1 cut(s)	785
PleI	GAGTC	2 cut(s)	700, 873
PpsI	GAGTC	2 cut(s)	700, 873
PpuMI	RGGWCCY	1 cut(s)	1486
PshAI	GACNNNNGTC	1 cut(s)	108
Psp124BI	GAGCTC	1 cut(s)	120
Psp5II	RGGWCCY	1 cut(s)	1486
Psp6I	CCWGG	2 cut(s)	632, 927
PspEI	GGTNACC	2 cut(s)	488, 968
PspFI	CCCAGC	2 cut(s)	313, 1193
PspGI	CCWGG	2 cut(s)	632, 927
PspN4I	GGNNCC	2 cut(s)	170, 263
PspPI	GGNCC	2 cut(s)	262, 1486
PspPPI	RGGWCCY	1 cut(s)	1486
PstI	CTGCAG	1 cut(s)	554
PvuII	CAGCTG	1 cut(s)	1197
RsaI	GTAC	2 cut(s)	559, 1132
RsaNI	GTAC	2 cut(s)	558, 1131
RseI	CAYNNNNRTG	1 cut(s)	1451
SacI	GAGCTC	1 cut(s)	120
SalI	GTCGAC	1 cut(s)	1442
SapI	GCTCTTC	1 cut(s)	1548
SaqAI	TTAA	1 cut(s)	159
Sau96I	GGNCC	2 cut(s)	262, 1486
ScaI	AGTACT	1 cut(s)	559
SchI	GAGTC	2 cut(s)	701, 874
ScrFI	CCNGG	8 cut(s)	601, 623, 634, 646, 647, 916, 929, 989
SduI	GDGCHC	5 cut(s)	89, 120, 149, 646, 819
SfaNI	GCATC	4 cut(s)	600, 737, 969, 984
SfcI	CTRYAG	2 cut(s)	75, 550
SgrAI	CRCCGGYG	1 cut(s)	749
SinI	GGWCC	2 cut(s)	262, 1486
SmaI	CCCGGG	1 cut(s)	647
SmiMI	CAYNNNNRTG	1 cut(s)	1451
SmlI	CTYRAG	1 cut(s)	119
SmoI	CTYRAG	1 cut(s)	119
Sse9I	AATT	5 cut(s)	48, 290, 496, 908, 934
SstI	GAGCTC	1 cut(s)	120
StyD4I	CCNGG	8 cut(s)	599, 621, 632, 644, 645, 914, 927, 987
StyI	CCWWGG	3 cut(s)	660, 1111, 1174
TaaI	ACNGT	1 cut(s)	779
TaqI	TCGA	9 cut(s)	178, 194, 462, 539, 863, 1338, 1422, 1443, 1539
TasI	AATT	5 cut(s)	48, 290, 496, 908, 934
TatI	WGTACW	1 cut(s)	557
TauI	GCSGC	7 cut(s)	365, 1043, 1053, 1092, 1155, 1158, 1164
TfiI	GAWTC	5 cut(s)	16, 180, 464, 517, 756
Tru1I	TTAA	1 cut(s)	159
Tru9I	TTAA	1 cut(s)	159
TscAI	CASTG	3 cut(s)	345, 1133, 1528
TseFI	GTSAC	2 cut(s)	488, 968
Tsp45I	GTSAC	2 cut(s)	488, 968
TspDTI	ATGAA	1 cut(s)	1130
TspGWI	ACGGA	3 cut(s)	457, 1132, 1234
TspMI	CCCGGG	1 cut(s)	645
TspRI	CASTG	3 cut(s)	345, 1133, 1528
Van91I	CCANNNNNTGG	1 cut(s)	50
VpaK11BI	GGWCC	2 cut(s)	262, 1486
XagI	CCTNNNNNAGG	1 cut(s)	1097
XapI	RAATTY	1 cut(s)	934
XcmI	CCANNNNNNNNNTGG	2 cut(s)	337, 1194
XmaI	CCCGGG	1 cut(s)	645
XmiI	GTMKAC	1 cut(s)	1443
ZrmI	AGTACT	1 cut(s)	559
Zsp2I	ATGCAT	1 cut(s)	730

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.