Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001263

Physical Location & Seq

Genomic Coordinates Reverse (-)

43941948 .. 43944713

Gene Structure 2766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1308300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGAAGGGTTCAAAGAGCACCTGCAAGTCCGCTTCTCACAAGCTTTTCAAGGACAAAGCAAAGAACCGTGTGGATGACTTGCAGGGGATGTTCACGGACCTCCAGTTTGCCAGGAAGGAGAGCCGCTCCATCGATGCTGCACTCCTCGAAGAACAAGTGCATCAGATGCTACGCGAGTGGAAAGCCGAGCTAAATGAGCCCTCCTCGGCTTCTTCTTTTCAGCAGCAGGGTGGCAGTCTTGGTTCGTTTTCTTCAGACATTTGCCGGCTGTTGCAGCTATGTGAAGAGGAAGATGATGCCACTAGTCCATTAGCTGCACCGAAATCCGAGCCTAATGATCAAAACTTGCAAGTTGGAGAAAGTTTGGTATTTCATGAGGGATTTAGTGTGAATCAAGGGCAACAGGAACATGCCTTCCCGTTGGCTGATCAGTGCAAAAGCTCCCCTTCCGGAGTTCGCAATGCTGTTAACAATTTAGAAGGGGCTAATCAATTGGACTATCATCAGTTTGAATTGCATCAAGACTTTGAGCAGAGTTTCTACCCTTGTTTTCATGGCACAGCTTTGAGGGGGGAGGACACATTGTCTCAGGCTTCTACTTATCTCCCGAGTATTTTCCCTCCGCCCTCTGCTTTCTTGGGCCCAAAGTGTGCACTTTGGGATTGCCCTAGGCCTGCTCAAGGGTTGGACTGGTGGCTAGACTACTGCAGTAGCTTTCATGCTGCTTTGGCATTGAATGAAGGACCACCAGGCATGGGCCCGGTCCTTAGACCTGGGGGCATCGGCCTGAAGGATGGCCTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGGTGTCGGTATCCCTGAGTGCGAGGGAGCTGCTACTGCAAAGTCTCCATGGAATGCACCTGAATTCTTTGATCTTTCGGTTCTCGAGGGTGAGATAATCCGGGAGTGGCTCTTTTTTGACAAGCCTCGAAGAGCTTTTGAGAGCGGTAACAGAAAGCAGAGGTCATTGCCAGATTACAACGGACGAGGTTGGCATGAGTCGAGGAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGGTCTTACTACATGGATCCTCAACCGCTGAACCATTTTGAGTGGCACCTTTATGAGTACGAGATCAACAAATGTGATGCTTGTGCCTTGTACAGATTGGAGCTGAAACTTGTTGATGGGAAGAAAAATTCCAAGTCCAAACTAACCAACGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTTTCTGCTGAGTTCCCCTCCGATAACAAGCGCACTGTCAAGGGCAGGGCCAAAGTTAATGCAAAGGTTAGTGTCGGAAATGTCTACTACGCTCCAAATCGAGGGGCAACAACAAATGGGACATTTGACTACGAGATCGGTGCACCCTACGACTACCTTGTTGACAATGTCAACGGATATTACCTAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002376 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009631 GO:0009648 GO:0009791 GO:0009814 GO:0009816 GO:0009889 GO:0009891 GO:0009893 GO:0010035 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0042742 GO:0043207 GO:0043565 GO:0045087 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

484

Amino Acids

53.82

Weight (kDa)

5.75

Isoelectric Point (pI)

46.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001263)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28520 AT1G28520 AT1G28520 AT1G28520 AT1G28520
fragaria_vesca	FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850
malus_domestica	MD05G1308300.v1.1 MD10G1287300.v1.1 MD17G1234200.v1.1
prunus_persica	Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.4G054500_v2.0.a1 Prupe.4G054500_v2.0.a1
pyrus_communis	pycom05g28500 pycom10g24030 pycom17g23750
rosa_chinensis	RchiOBHm_Chr2g0128221 RchiOBHm_Chr5g0009511
rosa_laevigata	RLG00000018998 RLG00000031668
rosa_multiflora	Rmu_sc0000837.1_g000011 Rmu_sc0002711.1_g000012 Rmu_sc0003465.1_g000003
rosa_roxburghii	Rroxscaffold_1G00066620 Rroxscaffold_1G00067320 Rroxscaffold_2G00115480 Rroxscaffold_2G00115940
rosa_rugosa	Rorug02G0278700 Rorug04G0443800 Rorug04G0443800 Rorug04G0443900 Rorug04G0444000
rosa_samantha	Rh2AG331400 Rh2BG339600 Rh2CG317900 Rh2DG356500 Rh5AG074800 Rh5BG070600 Rh5CG083000 Rh5DG070800
rosa_wichuraiana	Rw2G026810 Rw5G006930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	29
Acc36I	ACCTGC	1 cut(s)	29
AccB1I	GGYRCC	1 cut(s)	1119
AccBSI	CCGCTC	2 cut(s)	126, 981
AccI	GTMKAC	1 cut(s)	1344
AccII	CGCG	1 cut(s)	174
AccIII	TCCGGA	1 cut(s)	449
AciI	CCGC	5 cut(s)	30, 124, 623, 981, 1100
AclWI	GGATC	2 cut(s)	1085, 1098
AcsI	RAATTY	2 cut(s)	899, 1201
AcuI	CTGAAG	3 cut(s)	237, 809, 1091
AfaI	GTAC	2 cut(s)	1133, 1166
AfiI	CCNNNNNNNGG	3 cut(s)	680, 755, 1361
AgsI	TTSAA	4 cut(s)	12, 49, 512, 736
AhdI	GACNNNNNGTC	1 cut(s)	583
AhlI	ACTAGT	1 cut(s)	302
AjnI	CCWGG	3 cut(s)	110, 748, 772
AloI	GAACNNNNNNTCC	2 cut(s)	399, 431
Alw21I	GWGCWC	3 cut(s)	20, 655, 1405
Alw26I	GTCTC	2 cut(s)	591, 885
Alw44I	GTGCAC	2 cut(s)	651, 1401
AlwI	GGATC	2 cut(s)	1085, 1098
AlwNI	CAGNNNCTG	1 cut(s)	1235
Ama87I	CYCGRG	2 cut(s)	607, 920
Aor13HI	TCCGGA	1 cut(s)	449
AoxI	GGCC	6 cut(s)	640, 671, 757, 784, 796, 1308
ApaI	GGGCCC	2 cut(s)	644, 761
ApaLI	GTGCAC	2 cut(s)	651, 1401
ApeKI	GCWGC	7 cut(s)	137, 223, 274, 314, 722, 809, 866
ApoI	RAATTY	2 cut(s)	899, 1201
ArsI	GACNNNNNNTTYG	2 cut(s)	89, 121
Asp700I	GAANNNNTTC	1 cut(s)	1261
AspA2I	CCTAGG	1 cut(s)	668
AspLEI	GCGC	1 cut(s)	1293
AspS9I	GGNCC	8 cut(s)	97, 640, 641, 743, 757, 758, 763, 1308
AsuC2I	CCSGG	2 cut(s)	761, 938
AsuHPI	GGTGA	1 cut(s)	938
AvaI	CYCGRG	2 cut(s)	607, 920
AvaII	GGWCC	3 cut(s)	97, 743, 763
AvrII	CCTAGG	1 cut(s)	668
BaeGI	GKGCMC	4 cut(s)	644, 655, 761, 1405
BamHI	GGATCC	1 cut(s)	1090
BanI	GGYRCC	1 cut(s)	1119
BanII	GRGCYC	3 cut(s)	201, 644, 761
BarI	GAAGNNNNNNTAC	2 cut(s)	1064, 1096
Bbv12I	GWGCWC	3 cut(s)	20, 655, 1405
BbvI	GCAGC	7 cut(s)	124, 235, 286, 301, 709, 796, 853
BccI	CCATC	4 cut(s)	137, 788, 1184, 1246
BcgI	CGANNNNNNTGC	6 cut(s)	848, 882, 1214, 1248, 1382, 1416
BciT130I	CCWGG	3 cut(s)	112, 750, 774
BciVI	GTATCC	1 cut(s)	857
BclI	TGATCA	2 cut(s)	337, 427
BcnI	CCSGG	2 cut(s)	761, 938
BcoDI	GTCTC	2 cut(s)	591, 885
BcuI	ACTAGT	1 cut(s)	302
BfaI	CTAG	3 cut(s)	303, 669, 698
BfmI	CTRYAG	2 cut(s)	706, 1241
BfuAI	ACCTGC	1 cut(s)	29
BfuI	GTATCC	1 cut(s)	857
BisI	GCNGC	8 cut(s)	124, 138, 224, 275, 315, 723, 810, 867
BlnI	CCTAGG	1 cut(s)	668
BlsI	GCNGC	8 cut(s)	125, 139, 225, 276, 316, 724, 811, 868
Bme1390I	CCNGG	5 cut(s)	112, 750, 761, 774, 938
Bme18I	GGWCC	3 cut(s)	97, 743, 763
BmeRI	GACNNNNNGTC	1 cut(s)	583
BmeT110I	CYCGRG	2 cut(s)	607, 920
BmgT120I	GGNCC	8 cut(s)	97, 640, 641, 743, 757, 758, 763, 1308
BmiI	GGNNCC	4 cut(s)	642, 759, 1092, 1121
BmrFI	CCNGG	5 cut(s)	112, 750, 761, 774, 938
BmsI	GCATC	7 cut(s)	124, 156, 169, 286, 526, 789, 1141
BplI	GAGNNNNNCTC	6 cut(s)	110, 142, 188, 220, 1262, 1294
BpmI	CTGGAG	1 cut(s)	86
BpuEI	CTTGAG	1 cut(s)	663
BpuMI	CCSGG	2 cut(s)	761, 938
Bsa29I	ATCGAT	1 cut(s)	132
BsaJI	CCNNGG	4 cut(s)	204, 668, 773, 884
BsaWI	WCCGGW	1 cut(s)	449
Bsc4I	CCNNNNNNNGG	3 cut(s)	680, 755, 1361
Bse118I	RCCGGY	1 cut(s)	264
Bse1I	ACTGG	2 cut(s)	103, 695
Bse3DI	GCAATG	2 cut(s)	466, 1001
BseAI	TCCGGA	1 cut(s)	449
BseBI	CCWGG	3 cut(s)	112, 750, 774
BseCI	ATCGAT	1 cut(s)	132
BseDI	CCNNGG	4 cut(s)	204, 668, 773, 884
BseGI	GGATG	3 cut(s)	79, 93, 799
BseLI	CCNNNNNNNGG	3 cut(s)	680, 755, 1361
BseMI	GCAATG	2 cut(s)	466, 1001
BseMII	CTCAG	3 cut(s)	602, 843, 1260
BseNI	ACTGG	2 cut(s)	103, 695
BseRI	GAGGAG	2 cut(s)	134, 193
BseSI	GKGCMC	4 cut(s)	644, 655, 761, 1405
BseXI	GCAGC	7 cut(s)	124, 235, 286, 301, 709, 796, 853
BsgI	GTGCAG	2 cut(s)	123, 300
Bsh1236I	CGCG	1 cut(s)	174
BshFI	GGCC	6 cut(s)	642, 673, 759, 786, 798, 1310
BshNI	GGYRCC	1 cut(s)	1119
BshVI	ATCGAT	1 cut(s)	132
BsiHKAI	GWGCWC	3 cut(s)	20, 655, 1405
BsiHKCI	CYCGRG	2 cut(s)	607, 920
BsiSI	CCGG	4 cut(s)	265, 450, 761, 937
BslFI	GGGAC	1 cut(s)	1393
BslI	CCNNNNNNNGG	3 cut(s)	680, 755, 1361
BsmAI	GTCTC	2 cut(s)	591, 885
BsmFI	GGGAC	1 cut(s)	1393
BsmI	GAATGC	1 cut(s)	895
BsnI	GGCC	6 cut(s)	642, 673, 759, 786, 798, 1310
BsoBI	CYCGRG	2 cut(s)	607, 920
Bsp120I	GGGCCC	2 cut(s)	640, 757
Bsp1286I	GDGCHC	6 cut(s)	20, 201, 644, 655, 761, 1405
Bsp13I	TCCGGA	1 cut(s)	449
Bsp1407I	TGTACA	1 cut(s)	1164
Bsp143I	GATC	7 cut(s)	337, 427, 907, 1090, 1137, 1237, 1395
Bsp19I	CCATGG	1 cut(s)	884
BspACI	CCGC	5 cut(s)	30, 124, 623, 981, 1100
BspANI	GGCC	6 cut(s)	642, 673, 759, 786, 798, 1310
BspCNI	CTCAG	3 cut(s)	601, 844, 1261
BspDI	ATCGAT	1 cut(s)	132
BspEI	TCCGGA	1 cut(s)	449
BspFNI	CGCG	1 cut(s)	174
BspHI	TCATGA	1 cut(s)	373
BspLI	GGNNCC	4 cut(s)	642, 759, 1092, 1121
BspMAI	CTGCAG	2 cut(s)	710, 1245
BspMI	ACCTGC	1 cut(s)	29
BspPI	GGATC	2 cut(s)	1085, 1098
BspQI	GCTCTTC	1 cut(s)	961
BspT107I	GGYRCC	1 cut(s)	1119
BsrBI	CCGCTC	2 cut(s)	126, 981
BsrDI	GCAATG	2 cut(s)	466, 1001
BsrFI	RCCGGY	1 cut(s)	264
BsrGI	TGTACA	1 cut(s)	1164
BsrI	ACTGG	2 cut(s)	103, 695
BssAI	RCCGGY	1 cut(s)	264
BssECI	CCNNGG	4 cut(s)	204, 668, 773, 884
BssMI	GATC	7 cut(s)	337, 427, 907, 1090, 1137, 1237, 1395
BssT1I	CCWWGG	2 cut(s)	668, 884
Bst2UI	CCWGG	3 cut(s)	112, 750, 774
Bst4CI	ACNGT	2 cut(s)	68, 1297
Bst6I	CTCTTC	3 cut(s)	279, 961, 1067
BstAPI	GCANNNNNTGC	1 cut(s)	166
BstAUI	TGTACA	1 cut(s)	1164
BstC8I	GCNNGC	2 cut(s)	266, 675
BstDEI	CTNAG	5 cut(s)	588, 767, 815, 852, 1269
BstDSI	CCRYGG	1 cut(s)	884
BstENI	CCTNNNNNAGG	1 cut(s)	678
BstF5I	GGATG	3 cut(s)	79, 93, 799
BstFNI	CGCG	1 cut(s)	174
BstHHI	GCGC	1 cut(s)	1293
BstKTI	GATC	7 cut(s)	340, 430, 910, 1093, 1140, 1240, 1398
BstMAI	GTCTC	2 cut(s)	591, 885
BstMBI	GATC	7 cut(s)	337, 427, 907, 1090, 1137, 1237, 1395
BstMWI	GCNNNNNNNGC	6 cut(s)	166, 196, 274, 728, 818, 872
BstNI	CCWGG	3 cut(s)	112, 750, 774
BstNSI	RCATGY	1 cut(s)	413
BstSCI	CCNGG	5 cut(s)	110, 748, 759, 772, 936
BstSFI	CTRYAG	2 cut(s)	706, 1241
BstSLI	GKGCMC	4 cut(s)	644, 655, 761, 1405
BstUI	CGCG	1 cut(s)	174
BstV1I	GCAGC	7 cut(s)	124, 235, 286, 301, 709, 796, 853
BstX2I	RGATCY	1 cut(s)	1090
BstYI	RGATCY	1 cut(s)	1090
Bsu15I	ATCGAT	1 cut(s)	132
BsuI	GTATCC	1 cut(s)	857
BsuRI	GGCC	6 cut(s)	642, 673, 759, 786, 798, 1310
BsuTUI	ATCGAT	1 cut(s)	132
BtgI	CCRYGG	1 cut(s)	884
BtsCI	GGATG	3 cut(s)	79, 93, 799
BtsIMutI	CAGTG	2 cut(s)	437, 1293
BveI	ACCTGC	1 cut(s)	29
Cac8I	GCNNGC	2 cut(s)	266, 675
CaiI	CAGNNNCTG	1 cut(s)	1235
CciI	TCATGA	1 cut(s)	373
CfoI	GCGC	1 cut(s)	1293
Cfr10I	RCCGGY	1 cut(s)	264
Cfr13I	GGNCC	8 cut(s)	97, 640, 641, 743, 757, 758, 763, 1308
ClaI	ATCGAT	1 cut(s)	132
Csp6I	GTAC	2 cut(s)	1132, 1165
CviAII	CATG	8 cut(s)	374, 410, 554, 719, 754, 885, 1031, 1087
CviQI	GTAC	2 cut(s)	1132, 1165
DdeI	CTNAG	5 cut(s)	588, 767, 815, 852, 1269
DpnI	GATC	7 cut(s)	339, 429, 909, 1092, 1139, 1239, 1397
DpnII	GATC	7 cut(s)	337, 427, 907, 1090, 1137, 1237, 1395
DriI	GACNNNNNGTC	1 cut(s)	583
Eam1104I	CTCTTC	3 cut(s)	279, 961, 1067
Eam1105I	GACNNNNNGTC	1 cut(s)	583
EarI	CTCTTC	3 cut(s)	279, 961, 1067
EciI	GGCGGA	1 cut(s)	612
Eco130I	CCWWGG	2 cut(s)	668, 884
Eco147I	AGGCCT	1 cut(s)	673
Eco24I	GRGCYC	3 cut(s)	201, 644, 761
Eco47I	GGWCC	3 cut(s)	97, 743, 763
Eco57I	CTGAAG	3 cut(s)	237, 809, 1091
Eco88I	CYCGRG	2 cut(s)	607, 920
EcoNI	CCTNNNNNAGG	1 cut(s)	678
EcoRI	GAATTC	1 cut(s)	899
EcoRII	CCWGG	3 cut(s)	110, 748, 772
EcoT14I	CCWWGG	2 cut(s)	668, 884
EcoT38I	GRGCYC	3 cut(s)	201, 644, 761
ErhI	CCWWGG	2 cut(s)	668, 884
FaeI	CATG	8 cut(s)	377, 413, 557, 722, 757, 888, 1034, 1090
FalI	AAGNNNNNCTT	2 cut(s)	430, 462
FaqI	GGGAC	1 cut(s)	1393
FatI	CATG	8 cut(s)	373, 409, 553, 718, 753, 884, 1030, 1086
FbaI	TGATCA	2 cut(s)	337, 427
FblI	GTMKAC	1 cut(s)	1344
Fnu4HI	GCNGC	8 cut(s)	124, 138, 224, 275, 315, 723, 810, 867
FokI	GGATG	3 cut(s)	86, 100, 806
FriOI	GRGCYC	3 cut(s)	201, 644, 761
Fsp4HI	GCNGC	8 cut(s)	124, 138, 224, 275, 315, 723, 810, 867
FspBI	CTAG	3 cut(s)	303, 669, 698
GlaI	GCGC	1 cut(s)	1292
GluI	GCNGC	8 cut(s)	124, 138, 224, 275, 315, 723, 810, 867
GsuI	CTGGAG	1 cut(s)	86
HaeIII	GGCC	6 cut(s)	642, 673, 759, 786, 798, 1310
HapII	CCGG	4 cut(s)	265, 450, 761, 937
HhaI	GCGC	1 cut(s)	1293
Hin1II	CATG	8 cut(s)	377, 413, 557, 722, 757, 888, 1034, 1090
Hin6I	GCGC	1 cut(s)	1291
HinP1I	GCGC	1 cut(s)	1291
HincII	GTYRAC	3 cut(s)	469, 1423, 1432
HindII	GTYRAC	3 cut(s)	469, 1423, 1432
HindIII	AAGCTT	1 cut(s)	41
HinfI	GANTC	3 cut(s)	391, 1034, 1226
HpaI	GTTAAC	1 cut(s)	469
HpaII	CCGG	4 cut(s)	265, 450, 761, 937
HphI	GGTGA	1 cut(s)	938
Hpy166II	GTNNAC	7 cut(s)	93, 469, 653, 1345, 1403, 1423, 1432
Hpy188I	TCNGA	5 cut(s)	165, 256, 328, 1282, 1337
Hpy188III	TCNNGA	5 cut(s)	374, 450, 521, 607, 920
Hpy8I	GTNNAC	7 cut(s)	93, 469, 653, 1345, 1403, 1423, 1432
HpyAV	CCTTC	7 cut(s)	109, 424, 456, 473, 734, 784, 1251
HpyCH4III	ACNGT	2 cut(s)	68, 1297
HpyF10VI	GCNNNNNNNGC	6 cut(s)	166, 196, 274, 728, 818, 872
HpyF3I	CTNAG	5 cut(s)	588, 767, 815, 852, 1269
Hsp92II	CATG	8 cut(s)	377, 413, 557, 722, 757, 888, 1034, 1090
HspAI	GCGC	1 cut(s)	1291
Kpn2I	TCCGGA	1 cut(s)	449
KroI	GCCGGC	1 cut(s)	264
KroNI	GCCGGC	1 cut(s)	266
Ksp22I	TGATCA	2 cut(s)	337, 427
KspAI	GTTAAC	1 cut(s)	469
Kzo9I	GATC	7 cut(s)	337, 427, 907, 1090, 1137, 1237, 1395
LguI	GCTCTTC	1 cut(s)	961
LmnI	GCTCC	5 cut(s)	131, 446, 863, 1174, 1357
Lsp1109I	GCAGC	7 cut(s)	124, 235, 286, 301, 709, 796, 853
LweI	GCATC	7 cut(s)	124, 156, 169, 286, 526, 789, 1141
MaeI	CTAG	3 cut(s)	303, 669, 698
MaeIII	GTNAC	1 cut(s)	983
MalI	GATC	7 cut(s)	339, 429, 909, 1092, 1139, 1239, 1397
MbiI	CCGCTC	2 cut(s)	126, 981
MboI	GATC	7 cut(s)	337, 427, 907, 1090, 1137, 1237, 1395
MboII	GAAGA	8 cut(s)	161, 204, 243, 296, 302, 978, 1084, 1207
MfeI	CAATTG	1 cut(s)	491
MflI	RGATCY	1 cut(s)	1090
MhlI	GDGCHC	6 cut(s)	20, 201, 644, 655, 761, 1405
MluCI	AATT	5 cut(s)	472, 491, 512, 899, 1201
MlyI	GAGTC	1 cut(s)	1043
MmeI	TCCRAC	3 cut(s)	334, 666, 1315
MroI	TCCGGA	1 cut(s)	449
MroNI	GCCGGC	1 cut(s)	264
MroXI	GAANNNNTTC	1 cut(s)	1261
MseI	TTAA	2 cut(s)	468, 1317
MslI	CAYNNNNRTG	1 cut(s)	1125
MspA1I	CMGCKG	1 cut(s)	1102
MspI	CCGG	4 cut(s)	265, 450, 761, 937
MspR9I	CCNGG	5 cut(s)	112, 750, 761, 774, 938
MunI	CAATTG	1 cut(s)	491
Mva1269I	GAATGC	1 cut(s)	895
MvaI	CCWGG	3 cut(s)	112, 750, 774
MvnI	CGCG	1 cut(s)	174
MwoI	GCNNNNNNNGC	6 cut(s)	166, 196, 274, 728, 818, 872
NaeI	GCCGGC	1 cut(s)	266
NciI	CCSGG	2 cut(s)	761, 938
NcoI	CCATGG	1 cut(s)	884
NdeII	GATC	7 cut(s)	337, 427, 907, 1090, 1137, 1237, 1395
NgoMIV	GCCGGC	1 cut(s)	264
NlaIII	CATG	8 cut(s)	377, 413, 557, 722, 757, 888, 1034, 1090
NlaIV	GGNNCC	4 cut(s)	642, 759, 1092, 1121
NmeAIII	GCCGAG	2 cut(s)	185, 211
NspI	RCATGY	1 cut(s)	413
PaeR7I	CTCGAG	1 cut(s)	920
PagI	TCATGA	1 cut(s)	373
PaqCI	CACCTGC	1 cut(s)	29
PceI	AGGCCT	1 cut(s)	673
PciSI	GCTCTTC	1 cut(s)	961
PctI	GAATGC	1 cut(s)	895
PdiI	GCCGGC	1 cut(s)	266
PdmI	GAANNNNTTC	1 cut(s)	1261
PfeI	GAWTC	2 cut(s)	391, 1226
PflFI	GACNNNGTC	1 cut(s)	1427
PfoI	TCCNGGA	1 cut(s)	936
PkrI	GCNGC	8 cut(s)	125, 139, 225, 276, 316, 724, 811, 868
PleI	GAGTC	1 cut(s)	1042
PpsI	GAGTC	1 cut(s)	1042
Psp6I	CCWGG	3 cut(s)	110, 748, 772
PspGI	CCWGG	3 cut(s)	110, 748, 772
PspN4I	GGNNCC	4 cut(s)	642, 759, 1092, 1121
PspOMI	GGGCCC	2 cut(s)	640, 757
PspPI	GGNCC	8 cut(s)	97, 640, 641, 743, 757, 758, 763, 1308
PstI	CTGCAG	2 cut(s)	710, 1245
PstNI	CAGNNNCTG	1 cut(s)	1235
PsuI	RGATCY	1 cut(s)	1090
PsyI	GACNNNGTC	1 cut(s)	1427
RsaI	GTAC	2 cut(s)	1133, 1166
RsaNI	GTAC	2 cut(s)	1132, 1165
RseI	CAYNNNNRTG	1 cut(s)	1125
SapI	GCTCTTC	1 cut(s)	961
SaqAI	TTAA	2 cut(s)	468, 1317
SatI	GCNGC	8 cut(s)	124, 138, 224, 275, 315, 723, 810, 867
Sau3AI	GATC	7 cut(s)	337, 427, 907, 1090, 1137, 1237, 1395
Sau96I	GGNCC	8 cut(s)	97, 640, 641, 743, 757, 758, 763, 1308
SchI	GAGTC	1 cut(s)	1043
ScrFI	CCNGG	5 cut(s)	112, 750, 761, 774, 938
SduI	GDGCHC	6 cut(s)	20, 201, 644, 655, 761, 1405
SfaNI	GCATC	7 cut(s)	124, 156, 169, 286, 526, 789, 1141
SfcI	CTRYAG	2 cut(s)	706, 1241
Sfr274I	CTCGAG	1 cut(s)	920
SinI	GGWCC	3 cut(s)	97, 743, 763
SlaI	CTCGAG	1 cut(s)	920
SmiMI	CAYNNNNRTG	1 cut(s)	1125
SmlI	CTYRAG	2 cut(s)	678, 920
SmoI	CTYRAG	2 cut(s)	678, 920
SpeI	ACTAGT	1 cut(s)	302
Sse9I	AATT	5 cut(s)	472, 491, 512, 899, 1201
SseBI	AGGCCT	1 cut(s)	673
SsiI	CCGC	5 cut(s)	30, 124, 623, 981, 1100
SspMI	CTAG	3 cut(s)	303, 669, 698
StuI	AGGCCT	1 cut(s)	673
StyD4I	CCNGG	5 cut(s)	110, 748, 759, 772, 936
StyI	CCWWGG	2 cut(s)	668, 884
TaaI	ACNGT	2 cut(s)	68, 1297
TaqI	TCGA	6 cut(s)	132, 147, 921, 964, 1037, 1360
TasI	AATT	5 cut(s)	472, 491, 512, 899, 1201
TatI	WGTACW	1 cut(s)	1164
TauI	GCSGC	1 cut(s)	126
TfiI	GAWTC	2 cut(s)	391, 1226
Tru1I	TTAA	2 cut(s)	468, 1317
Tru9I	TTAA	2 cut(s)	468, 1317
TscAI	CASTG	2 cut(s)	437, 1300
TseI	GCWGC	7 cut(s)	137, 223, 274, 314, 722, 809, 866
TspDTI	ATGAA	6 cut(s)	17, 362, 542, 707, 753, 1067
TspGWI	ACGGA	3 cut(s)	110, 1032, 1449
TspRI	CASTG	2 cut(s)	437, 1300
Tth111I	GACNNNGTC	1 cut(s)	1427
VneI	GTGCAC	2 cut(s)	651, 1401
VpaK11BI	GGWCC	3 cut(s)	97, 743, 763
XagI	CCTNNNNNAGG	1 cut(s)	678
XapI	RAATTY	2 cut(s)	899, 1201
XceI	RCATGY	1 cut(s)	413
XhoI	CTCGAG	1 cut(s)	920
XmaJI	CCTAGG	1 cut(s)	668
XmiI	GTMKAC	1 cut(s)	1344
XmnI	GAANNNNTTC	1 cut(s)	1261
XspI	CTAG	3 cut(s)	303, 669, 698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.