Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001263

Physical Location & Seq

Genomic Coordinates Reverse (-)

88659561 .. 88662660

Gene Structure 3100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00067320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGAGGAAGGGTTCGAAGAGCAATTGCAAGTCGGTTTCTCATAAGCTCTTCAAGGACAAAGCCAAGAACCGTGTCGATGACTTGCAGGGCATGTTCATGGATCTCCAGTTTGCCAGGAAGGAGAGCCGCACTATCGATGCCACCCTCCTCGAAGAACAAGTCCATCAGATGCTCCGCGAATGGAAATCCGAGCTGAATGAGCCGTCCCCAGCTTCTTCTTTGCAGCAAGGTGGTAGTGTTGGTTCGTTCTCTTCAGACATTTGTCGGCTGTTGCAGCTTTGTGAGGAGGAAGATGATGCCAGCAGTCCATTAGCTGCACCAAAACCTGAGCCTAACGATCAGAAATTGGAAGTTGGAGAGAGTTTGGTCTTTCAAGAGCTCCCTTTAGGAGTTCGCAGTGCCGGTGTTAACAATTTGGAAGGGGCTAATCAATTGGACTATCAGCAGTTTGACTTGCGTCAAGACTTTGATCACAACTACTACAGTTGTTTTAATGGTACAGCTCTGAGTGTGGGCGATGCATTGTCTCATGTCACTAGTTATCTACCAAGTATATGCCCTCCACCTTCAGCTTTCTTAGGCCCAAAGTGCGCACTTTGGGATTGTCCTAGGCCTGCTCAAGGGTTGGACTGGTGTCAAGACTACTGCAGTAGCTTTCATGCTGCCTTAGCGTTGAATGAAGGACCACCTGGCATGGCTCCAGTCCTACGACCTGGGGGCATTGGCCTTAAGGATGGCCTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGAATCCCTGAGTGTGAGGGAGCTGCTACTGCAAAGTCTCCATGGAATGCACCTGAACTCTTTGATCTTTTGGTTCTTGAGGGAGAGATGCTTCGGGAATGGCTCTTTTTTGACAAGCCTCGAAGAGCTTTTGAGAGTGGTAACAGAAAGCAGAGGTCGTTGCCAGATTACAACGGACGAGGTTGGCATGAGTCAAGGAAGCAAGTGATGAATGAATTTGGAGGGCTGAAGAGATCCTATTATATGGATCCGCAACCTCTGAACCATTTTGAGTGGCACCTTTATGAATACGAGATCAACAAGTGTGATGCTTGTGCCCTCTATAGATTGGAACTGAAACTTGTCGATGGGAAGAAAAATTCCAAGGGGAAACTAAGTAATGATTCAGTTGCTGATCTCCAGAAGCAAATGGGAAGGCTTTCTGCTGAGTTCCCCTCTGATAACAAGCGCAATGTGAAGGGCAGGGCCAAAGTGAATGCAAAGGTTGGTGTTGGAACTGTCTATTACACTCCAACCCGAGGGACAGCAGCAAATGGGACATTTGACTATGGAACTGGTCCACCATATGATTATCTTGTTGACAATCTAAGTGGCTATTACCTAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002376 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009631 GO:0009648 GO:0009791 GO:0009814 GO:0009816 GO:0009889 GO:0009891 GO:0009893 GO:0010035 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0042742 GO:0043207 GO:0043565 GO:0045087 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

463

Amino Acids

51.47

Weight (kDa)

5.86

Isoelectric Point (pI)

46.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001263)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28520 AT1G28520 AT1G28520 AT1G28520 AT1G28520
fragaria_vesca	FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850
malus_domestica	MD05G1308300.v1.1 MD10G1287300.v1.1 MD17G1234200.v1.1
prunus_persica	Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.4G054500_v2.0.a1 Prupe.4G054500_v2.0.a1
pyrus_communis	pycom05g28500 pycom10g24030 pycom17g23750
rosa_chinensis	RchiOBHm_Chr2g0128221 RchiOBHm_Chr5g0009511
rosa_laevigata	RLG00000018998 RLG00000031668
rosa_multiflora	Rmu_sc0000837.1_g000011 Rmu_sc0002711.1_g000012 Rmu_sc0003465.1_g000003
rosa_roxburghii	Rroxscaffold_1G00066620 Rroxscaffold_1G00067320 Rroxscaffold_2G00115480 Rroxscaffold_2G00115940
rosa_rugosa	Rorug02G0278700 Rorug04G0443800 Rorug04G0443800 Rorug04G0443900 Rorug04G0444000
rosa_samantha	Rh2AG331400 Rh2BG339600 Rh2CG317900 Rh2DG356500 Rh5AG074800 Rh5BG070600 Rh5CG083000 Rh5DG070800
rosa_wichuraiana	Rw2G026810 Rw5G006930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	592
AccB1I	GGYRCC	1 cut(s)	1059
AccII	CGCG	1 cut(s)	177
AciI	CCGC	3 cut(s)	127, 175, 1034
AclWI	GGATC	4 cut(s)	108, 1011, 1025, 1038
AcsI	RAATTY	2 cut(s)	998, 1141
AcuI	CTGAAG	3 cut(s)	237, 552, 1031
AfaI	GTAC	1 cut(s)	499
AfiI	CCNNNNNNNGG	2 cut(s)	620, 1301
AflII	CTTAAG	1 cut(s)	728
AgsI	TTSAA	3 cut(s)	52, 374, 676
AhlI	ACTAGT	1 cut(s)	536
AjnI	CCWGG	3 cut(s)	113, 688, 712
Alw21I	GWGCWC	1 cut(s)	381
Alw26I	GTCTC	2 cut(s)	531, 825
AlwI	GGATC	4 cut(s)	108, 1011, 1025, 1038
AlwNI	CAGNNNCTG	1 cut(s)	1175
Ama87I	CYCGRG	1 cut(s)	1299
AoxI	GGCC	5 cut(s)	580, 611, 724, 736, 1248
ApeKI	GCWGC	7 cut(s)	223, 274, 314, 662, 749, 806, 1310
ApoI	RAATTY	2 cut(s)	998, 1141
ArsI	GACNNNNNNTTYG	2 cut(s)	144, 176
Asp700I	GAANNNNTTC	1 cut(s)	1201
AspA2I	CCTAGG	1 cut(s)	608
AspLEI	GCGC	2 cut(s)	593, 1233
AspS9I	GGNCC	4 cut(s)	581, 683, 1248, 1340
AsuII	TTCGAA	1 cut(s)	14
AvaI	CYCGRG	1 cut(s)	1299
AvaII	GGWCC	2 cut(s)	683, 1340
AvrII	CCTAGG	1 cut(s)	608
BaeGI	GKGCMC	1 cut(s)	1102
BamHI	GGATCC	1 cut(s)	1030
BanI	GGYRCC	1 cut(s)	1059
BanII	GRGCYC	1 cut(s)	381
Bbv12I	GWGCWC	1 cut(s)	381
BbvI	GCAGC	7 cut(s)	235, 286, 301, 649, 736, 793, 1322
BccI	CCATC	3 cut(s)	171, 728, 1124
BceAI	ACGGC	1 cut(s)	187
BciT130I	CCWGG	3 cut(s)	115, 690, 714
BclI	TGATCA	1 cut(s)	469
BcoDI	GTCTC	2 cut(s)	531, 825
BcuI	ACTAGT	1 cut(s)	536
BfaI	CTAG	2 cut(s)	537, 609
BfmI	CTRYAG	3 cut(s)	481, 646, 1105
BfrI	CTTAAG	1 cut(s)	728
BisI	GCNGC	8 cut(s)	127, 224, 275, 315, 663, 750, 807, 1311
BlnI	CCTAGG	1 cut(s)	608
BlsI	GCNGC	8 cut(s)	128, 225, 276, 316, 664, 751, 808, 1312
Bme1390I	CCNGG	3 cut(s)	115, 690, 714
Bme18I	GGWCC	2 cut(s)	683, 1340
BmeT110I	CYCGRG	1 cut(s)	1299
BmgT120I	GGNCC	4 cut(s)	581, 683, 1248, 1340
BmiI	GGNNCC	3 cut(s)	699, 1032, 1061
BmrFI	CCNGG	3 cut(s)	115, 690, 714
BmsI	GCATC	6 cut(s)	127, 159, 286, 508, 861, 1081
BoxI	GACNNNNGTC	3 cut(s)	261, 456, 633
BplI	GAGNNNNNCTC	2 cut(s)	1202, 1234
BpmI	CTGGAG	3 cut(s)	89, 684, 1166
Bpu10I	CCTNAGC	2 cut(s)	327, 667
Bpu14I	TTCGAA	1 cut(s)	14
BpuEI	CTTGAG	2 cut(s)	603, 881
Bsa29I	ATCGAT	1 cut(s)	135
BsaJI	CCNNGG	5 cut(s)	608, 713, 824, 1146, 1300
Bsc4I	CCNNNNNNNGG	2 cut(s)	620, 1301
Bse118I	RCCGGY	1 cut(s)	401
Bse1I	ACTGG	4 cut(s)	106, 635, 701, 1342
Bse3DI	GCAATG	1 cut(s)	1240
BseBI	CCWGG	3 cut(s)	115, 690, 714
BseCI	ATCGAT	1 cut(s)	135
BseDI	CCNNGG	5 cut(s)	608, 713, 824, 1146, 1300
BseGI	GGATG	1 cut(s)	739
BseLI	CCNNNNNNNGG	2 cut(s)	620, 1301
BseMI	GCAATG	1 cut(s)	1240
BseMII	CTCAG	4 cut(s)	318, 497, 783, 1200
BseNI	ACTGG	4 cut(s)	106, 635, 701, 1342
BseRI	GAGGAG	2 cut(s)	137, 299
BseSI	GKGCMC	1 cut(s)	1102
BseXI	GCAGC	7 cut(s)	235, 286, 301, 649, 736, 793, 1322
BseYI	CCCAGC	1 cut(s)	208
BsgI	GTGCAG	1 cut(s)	300
Bsh1236I	CGCG	1 cut(s)	177
BshFI	GGCC	5 cut(s)	582, 613, 726, 738, 1250
BshNI	GGYRCC	1 cut(s)	1059
BshVI	ATCGAT	1 cut(s)	135
BsiHKAI	GWGCWC	1 cut(s)	381
BsiHKCI	CYCGRG	1 cut(s)	1299
BsiSI	CCGG	1 cut(s)	402
BslFI	GGGAC	3 cut(s)	190, 1318, 1333
BslI	CCNNNNNNNGG	2 cut(s)	620, 1301
BsmAI	GTCTC	2 cut(s)	531, 825
BsmFI	GGGAC	3 cut(s)	190, 1318, 1333
BsmI	GAATGC	2 cut(s)	835, 1264
BsnI	GGCC	5 cut(s)	582, 613, 726, 738, 1250
BsoBI	CYCGRG	1 cut(s)	1299
Bsp119I	TTCGAA	1 cut(s)	14
Bsp1286I	GDGCHC	2 cut(s)	381, 1102
Bsp143I	GATC	8 cut(s)	100, 337, 469, 847, 1016, 1030, 1077, 1177
Bsp19I	CCATGG	1 cut(s)	824
BspACI	CCGC	3 cut(s)	127, 175, 1034
BspANI	GGCC	5 cut(s)	582, 613, 726, 738, 1250
BspCNI	CTCAG	4 cut(s)	319, 498, 784, 1201
BspDI	ATCGAT	1 cut(s)	135
BspFNI	CGCG	1 cut(s)	177
BspLI	GGNNCC	3 cut(s)	699, 1032, 1061
BspMAI	CTGCAG	1 cut(s)	650
BspPI	GGATC	4 cut(s)	108, 1011, 1025, 1038
BspQI	GCTCTTC	3 cut(s)	11, 53, 901
BspT104I	TTCGAA	1 cut(s)	14
BspT107I	GGYRCC	1 cut(s)	1059
BspTI	CTTAAG	1 cut(s)	728
BsrDI	GCAATG	1 cut(s)	1240
BsrFI	RCCGGY	1 cut(s)	401
BsrI	ACTGG	4 cut(s)	106, 635, 701, 1342
BssAI	RCCGGY	1 cut(s)	401
BssECI	CCNNGG	5 cut(s)	608, 713, 824, 1146, 1300
BssMI	GATC	8 cut(s)	100, 337, 469, 847, 1016, 1030, 1077, 1177
BssT1I	CCWWGG	3 cut(s)	608, 824, 1146
Bst2UI	CCWGG	3 cut(s)	115, 690, 714
Bst4CI	ACNGT	3 cut(s)	71, 485, 1282
Bst6I	CTCTTC	5 cut(s)	11, 53, 256, 901, 1007
BstAFI	CTTAAG	1 cut(s)	728
BstBI	TTCGAA	1 cut(s)	14
BstC8I	GCNNGC	2 cut(s)	301, 615
BstDEI	CTNAG	9 cut(s)	327, 506, 577, 667, 755, 792, 1157, 1209, 1370
BstDSI	CCRYGG	1 cut(s)	824
BstENI	CCTNNNNNAGG	1 cut(s)	618
BstF5I	GGATG	1 cut(s)	739
BstFNI	CGCG	1 cut(s)	177
BstHHI	GCGC	2 cut(s)	593, 1233
BstKTI	GATC	8 cut(s)	103, 340, 472, 850, 1019, 1033, 1080, 1180
BstMAI	GTCTC	2 cut(s)	531, 825
BstMBI	GATC	8 cut(s)	100, 337, 469, 847, 1016, 1030, 1077, 1177
BstMWI	GCNNNNNNNGC	6 cut(s)	199, 274, 588, 668, 758, 812
BstNI	CCWGG	3 cut(s)	115, 690, 714
BstNSI	RCATGY	1 cut(s)	94
BstPAI	GACNNNNGTC	3 cut(s)	261, 456, 633
BstSCI	CCNGG	3 cut(s)	113, 688, 712
BstSFI	CTRYAG	3 cut(s)	481, 646, 1105
BstSLI	GKGCMC	1 cut(s)	1102
BstUI	CGCG	1 cut(s)	177
BstV1I	GCAGC	7 cut(s)	235, 286, 301, 649, 736, 793, 1322
BstX2I	RGATCY	3 cut(s)	100, 1016, 1030
BstYI	RGATCY	3 cut(s)	100, 1016, 1030
Bsu15I	ATCGAT	1 cut(s)	135
BsuRI	GGCC	5 cut(s)	582, 613, 726, 738, 1250
BsuTUI	ATCGAT	1 cut(s)	135
BtgI	CCRYGG	1 cut(s)	824
BtgZI	GCGATG	1 cut(s)	531
BtsCI	GGATG	1 cut(s)	739
BtsI	GCAGTG	1 cut(s)	403
BtsIMutI	CAGTG	1 cut(s)	403
Cac8I	GCNNGC	2 cut(s)	301, 615
CaiI	CAGNNNCTG	1 cut(s)	1175
CfoI	GCGC	2 cut(s)	593, 1233
Cfr10I	RCCGGY	1 cut(s)	401
Cfr13I	GGNCC	4 cut(s)	581, 683, 1248, 1340
ClaI	ATCGAT	1 cut(s)	135
CseI	GACGC	1 cut(s)	446
Csp6I	GTAC	1 cut(s)	498
CspCI	CAANNNNNGTGG	2 cut(s)	1354, 1389
CviAII	CATG	7 cut(s)	91, 97, 530, 659, 694, 825, 971
CviQI	GTAC	1 cut(s)	498
DdeI	CTNAG	9 cut(s)	327, 506, 577, 667, 755, 792, 1157, 1209, 1370
DpnI	GATC	8 cut(s)	102, 339, 471, 849, 1018, 1032, 1079, 1179
DpnII	GATC	8 cut(s)	100, 337, 469, 847, 1016, 1030, 1077, 1177
Eam1104I	CTCTTC	5 cut(s)	11, 53, 256, 901, 1007
EarI	CTCTTC	5 cut(s)	11, 53, 256, 901, 1007
Ecl136II	GAGCTC	1 cut(s)	379
Eco130I	CCWWGG	3 cut(s)	608, 824, 1146
Eco147I	AGGCCT	1 cut(s)	613
Eco24I	GRGCYC	1 cut(s)	381
Eco47I	GGWCC	2 cut(s)	683, 1340
Eco53kI	GAGCTC	1 cut(s)	379
Eco57I	CTGAAG	3 cut(s)	237, 552, 1031
Eco88I	CYCGRG	1 cut(s)	1299
EcoICRI	GAGCTC	1 cut(s)	379
EcoNI	CCTNNNNNAGG	1 cut(s)	618
EcoRII	CCWGG	3 cut(s)	113, 688, 712
EcoT14I	CCWWGG	3 cut(s)	608, 824, 1146
EcoT22I	ATGCAT	1 cut(s)	523
EcoT38I	GRGCYC	1 cut(s)	381
ErhI	CCWWGG	3 cut(s)	608, 824, 1146
FaeI	CATG	7 cut(s)	94, 100, 533, 662, 697, 828, 974
FaqI	GGGAC	3 cut(s)	190, 1318, 1333
FatI	CATG	7 cut(s)	90, 96, 529, 658, 693, 824, 970
FauNDI	CATATG	1 cut(s)	1348
FbaI	TGATCA	1 cut(s)	469
Fnu4HI	GCNGC	8 cut(s)	127, 224, 275, 315, 663, 750, 807, 1311
FokI	GGATG	1 cut(s)	746
FriOI	GRGCYC	1 cut(s)	381
Fsp4HI	GCNGC	8 cut(s)	127, 224, 275, 315, 663, 750, 807, 1311
FspAI	RTGCGCAY	1 cut(s)	592
FspBI	CTAG	2 cut(s)	537, 609
FspI	TGCGCA	1 cut(s)	592
GlaI	GCGC	2 cut(s)	592, 1232
GluI	GCNGC	8 cut(s)	127, 224, 275, 315, 663, 750, 807, 1311
GsaI	CCCAGC	1 cut(s)	212
GsuI	CTGGAG	3 cut(s)	89, 684, 1166
HaeIII	GGCC	5 cut(s)	582, 613, 726, 738, 1250
HapII	CCGG	1 cut(s)	402
HgaI	GACGC	1 cut(s)	446
HhaI	GCGC	2 cut(s)	593, 1233
Hin1II	CATG	7 cut(s)	94, 100, 533, 662, 697, 828, 974
Hin6I	GCGC	2 cut(s)	591, 1231
HinP1I	GCGC	2 cut(s)	591, 1231
HincII	GTYRAC	2 cut(s)	409, 1363
HindII	GTYRAC	2 cut(s)	409, 1363
HinfI	GANTC	3 cut(s)	786, 974, 1166
HpaI	GTTAAC	1 cut(s)	409
HpaII	CCGG	1 cut(s)	402
Hpy166II	GTNNAC	3 cut(s)	409, 1343, 1363
Hpy188I	TCNGA	7 cut(s)	168, 190, 256, 342, 507, 1044, 1222
Hpy188III	TCNNGA	6 cut(s)	374, 461, 638, 860, 878, 1183
Hpy8I	GTNNAC	3 cut(s)	409, 1343, 1363
HpyAV	CCTTC	6 cut(s)	112, 413, 576, 674, 1191, 1234
HpyCH4III	ACNGT	3 cut(s)	71, 485, 1282
HpyF10VI	GCNNNNNNNGC	6 cut(s)	199, 274, 588, 668, 758, 812
HpyF3I	CTNAG	9 cut(s)	327, 506, 577, 667, 755, 792, 1157, 1209, 1370
Hsp92II	CATG	7 cut(s)	94, 100, 533, 662, 697, 828, 974
HspAI	GCGC	2 cut(s)	591, 1231
Ksp22I	TGATCA	1 cut(s)	469
KspAI	GTTAAC	1 cut(s)	409
Kzo9I	GATC	8 cut(s)	100, 337, 469, 847, 1016, 1030, 1077, 1177
LguI	GCTCTTC	3 cut(s)	11, 53, 901
LmnI	GCTCC	4 cut(s)	177, 384, 703, 803
Lsp1109I	GCAGC	7 cut(s)	235, 286, 301, 649, 736, 793, 1322
LweI	GCATC	6 cut(s)	127, 159, 286, 508, 861, 1081
MaeI	CTAG	2 cut(s)	537, 609
MaeIII	GTNAC	2 cut(s)	532, 923
MalI	GATC	8 cut(s)	102, 339, 471, 849, 1018, 1032, 1079, 1179
MboI	GATC	8 cut(s)	100, 337, 469, 847, 1016, 1030, 1077, 1177
MboII	GAAGA	9 cut(s)	28, 40, 164, 207, 243, 302, 918, 1024, 1147
MfeI	CAATTG	2 cut(s)	22, 431
MflI	RGATCY	3 cut(s)	100, 1016, 1030
MhlI	GDGCHC	2 cut(s)	381, 1102
MluCI	AATT	6 cut(s)	22, 344, 412, 431, 998, 1141
MlyI	GAGTC	1 cut(s)	983
MmeI	TCCRAC	5 cut(s)	334, 606, 763, 1255, 1319
Mph1103I	ATGCAT	1 cut(s)	523
MroXI	GAANNNNTTC	1 cut(s)	1201
MseI	TTAA	3 cut(s)	408, 492, 729
MslI	CAYNNNNRTG	2 cut(s)	95, 1065
MspCI	CTTAAG	1 cut(s)	728
MspI	CCGG	1 cut(s)	402
MspR9I	CCNGG	3 cut(s)	115, 690, 714
MunI	CAATTG	2 cut(s)	22, 431
Mva1269I	GAATGC	2 cut(s)	835, 1264
MvaI	CCWGG	3 cut(s)	115, 690, 714
MvnI	CGCG	1 cut(s)	177
MwoI	GCNNNNNNNGC	6 cut(s)	199, 274, 588, 668, 758, 812
NcoI	CCATGG	1 cut(s)	824
NdeI	CATATG	1 cut(s)	1348
NdeII	GATC	8 cut(s)	100, 337, 469, 847, 1016, 1030, 1077, 1177
NlaIII	CATG	7 cut(s)	94, 100, 533, 662, 697, 828, 974
NlaIV	GGNNCC	3 cut(s)	699, 1032, 1061
NmuCI	GTSAC	1 cut(s)	532
NsbI	TGCGCA	1 cut(s)	592
NsiI	ATGCAT	1 cut(s)	523
NspI	RCATGY	1 cut(s)	94
NspV	TTCGAA	1 cut(s)	14
PceI	AGGCCT	1 cut(s)	613
PciSI	GCTCTTC	3 cut(s)	11, 53, 901
PctI	GAATGC	2 cut(s)	835, 1264
PdmI	GAANNNNTTC	1 cut(s)	1201
PfeI	GAWTC	2 cut(s)	786, 1166
PkrI	GCNGC	8 cut(s)	128, 225, 276, 316, 664, 751, 808, 1312
PleI	GAGTC	1 cut(s)	982
PpsI	GAGTC	1 cut(s)	982
PshAI	GACNNNNGTC	3 cut(s)	261, 456, 633
Psp124BI	GAGCTC	1 cut(s)	381
Psp6I	CCWGG	3 cut(s)	113, 688, 712
PspFI	CCCAGC	1 cut(s)	208
PspGI	CCWGG	3 cut(s)	113, 688, 712
PspN4I	GGNNCC	3 cut(s)	699, 1032, 1061
PspPI	GGNCC	4 cut(s)	581, 683, 1248, 1340
PsrI	GAACNNNNNNTAC	2 cut(s)	226, 258
PstI	CTGCAG	1 cut(s)	650
PstNI	CAGNNNCTG	1 cut(s)	1175
PsuI	RGATCY	3 cut(s)	100, 1016, 1030
RsaI	GTAC	1 cut(s)	499
RsaNI	GTAC	1 cut(s)	498
RseI	CAYNNNNRTG	2 cut(s)	95, 1065
SacI	GAGCTC	1 cut(s)	381
SapI	GCTCTTC	3 cut(s)	11, 53, 901
SaqAI	TTAA	3 cut(s)	408, 492, 729
SatI	GCNGC	8 cut(s)	127, 224, 275, 315, 663, 750, 807, 1311
Sau3AI	GATC	8 cut(s)	100, 337, 469, 847, 1016, 1030, 1077, 1177
Sau96I	GGNCC	4 cut(s)	581, 683, 1248, 1340
SchI	GAGTC	1 cut(s)	983
ScrFI	CCNGG	3 cut(s)	115, 690, 714
SduI	GDGCHC	2 cut(s)	381, 1102
SfaNI	GCATC	6 cut(s)	127, 159, 286, 508, 861, 1081
SfcI	CTRYAG	3 cut(s)	481, 646, 1105
SfuI	TTCGAA	1 cut(s)	14
SinI	GGWCC	2 cut(s)	683, 1340
SmiMI	CAYNNNNRTG	2 cut(s)	95, 1065
SmlI	CTYRAG	3 cut(s)	618, 728, 860
SmoI	CTYRAG	3 cut(s)	618, 728, 860
SpeI	ACTAGT	1 cut(s)	536
Sse9I	AATT	6 cut(s)	22, 344, 412, 431, 998, 1141
SseBI	AGGCCT	1 cut(s)	613
SsiI	CCGC	3 cut(s)	127, 175, 1034
SspMI	CTAG	2 cut(s)	537, 609
SstI	GAGCTC	1 cut(s)	381
StuI	AGGCCT	1 cut(s)	613
StyD4I	CCNGG	3 cut(s)	113, 688, 712
StyI	CCWWGG	3 cut(s)	608, 824, 1146
TaaI	ACNGT	3 cut(s)	71, 485, 1282
TaqI	TCGA	6 cut(s)	14, 75, 135, 150, 904, 1128
TasI	AATT	6 cut(s)	22, 344, 412, 431, 998, 1141
TauI	GCSGC	1 cut(s)	129
TfiI	GAWTC	2 cut(s)	786, 1166
Tru1I	TTAA	3 cut(s)	408, 492, 729
Tru9I	TTAA	3 cut(s)	408, 492, 729
TscAI	CASTG	1 cut(s)	403
TseFI	GTSAC	1 cut(s)	532
TseI	GCWGC	7 cut(s)	223, 274, 314, 662, 749, 806, 1310
Tsp45I	GTSAC	1 cut(s)	532
TspDTI	ATGAA	6 cut(s)	85, 647, 693, 1007, 1011, 1083
TspGWI	ACGGA	1 cut(s)	972
TspRI	CASTG	1 cut(s)	403
Vha464I	CTTAAG	1 cut(s)	728
VpaK11BI	GGWCC	2 cut(s)	683, 1340
XagI	CCTNNNNNAGG	1 cut(s)	618
XapI	RAATTY	2 cut(s)	998, 1141
XceI	RCATGY	1 cut(s)	94
XmaJI	CCTAGG	1 cut(s)	608
XmnI	GAANNNNTTC	1 cut(s)	1201
XspI	CTAG	2 cut(s)	537, 609
Zsp2I	ATGCAT	1 cut(s)	523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.