Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001263

Physical Location & Seq

Genomic Coordinates Forward (+)

7119297 .. 7121273

Gene Structure 1977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G006930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGAAGTGACGAGGGGGCGGGTGTTTGTGATGAGGAAGGGTTCGAAGAGCAATTGCAAGTCGGTTTCTCATAAGCTCTTCAAGGACAAAGCCAAGAACCGTGTCGATGACTTGCAGGGCATGTTCATGGATCTCCAGTTTGCCAGGAAGGAGAGCCGCACTATCGATGCCACCCTCCTCGAAGAACAAGTCCATCAGATGCTCCGCGAATGGAAATCCGAGCTCAATGAGCCGTCCCCAGCTTCTTCTTTGCAGCAAGGTGGTAGTGTTGGTTCGTTCTCTTCAGACATCTGTCGGCTGTTGCAGCTTTGTGAGGAGGAAGATGATGCCAGCAGTCCATTAGCTGCACCAAAACCTGAGCCTAACGATCAGAAATTGGAAGTCGGAGAGAGTTTGGTCTTTCAAGAGGGGTTCAGTGTGAATCATAGGCAACAGGAACACGGCTTTCCACTGGCTGATCAGGGCAAAAGCTCCCTTTTAGGAGTTCGCAGTGCCGGTGTTAACAATTTGGAAGGGGCTAATCAATTGGACTATCAGCAGTATGACTTGCATCAAGACTTTGATCACAACTACTACAGTTGTTTTAATGGTACAGCTTTGAGTGCGGGCGATGCATTGTCTCATGTCACTAGTTATCTACCAAGTATATGCCCTCCACCTTCAGCTTTCTTAGGCCCAAAGTGTGCACTTTGGGATTGTCCTAGGCCTGCTCAAGGGTTGGATTGGTGTCAAGACTACTGCAGTAGCTTTCATGCTGCTTTAGCGCTGAATGAAGGACCACCTGGCATGGCTCCAGTCCTACGACCTGGGGGCATTGGCCTTAAGGATGGCCTGCTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGAATCCCTGAGTGTGAGGGAGCTGCTACTGCAAAGTCTCCATGGAATGCACCTGAACTCTTTGATCTTTTGGTTCTTGAGGGAGAGATGCTTCGGGAATGGCTCTTTTTTGACAAGCCTCGAAGAGCTTTTGAGAGTGGTAACAGAAAGCAGAGGTCGTTGCCAGATTACAATGGACGAGGTTGGCATGAGTCAAGGAAGCAAGTGATGAATGAATTCGGAGGGCTGAAGAGATCCTATTATATGGATCCGCAACCCCTGAACCATTTTGAGTGGCACCTTTATGAGTACGAGATCAACAAGTGTGATGCTTGTGCCCTCTATAGATTGGAACTGAAACTTGTTGATGGGAAGAAAAATTCCAAGGGGAAACTAAGTAATGATTCAGTTGCTGATCTCCAGAAGCAAATGGGAAGGCTTTCTGCTGAGTTCCCCTCTGATAACAAGCGCAATGTGAAGGGCAGGGCCAAAGTGAATGCAAAGGTTGGTGTTGGAACTGTCTATTACACTCCAACTCGAGGGACAGCAACAAATGGGACATTTGACTATGGAACAGGTCCACCATATGATTATCTTGTTGACAATCTAAGTGGCTATTACCTAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002376 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009631 GO:0009648 GO:0009791 GO:0009814 GO:0009816 GO:0009889 GO:0009891 GO:0009893 GO:0010035 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0042742 GO:0043207 GO:0043565 GO:0045087 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

494

Amino Acids

54.96

Weight (kDa)

6.05

Isoelectric Point (pI)

43.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001263)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28520 AT1G28520 AT1G28520 AT1G28520 AT1G28520
fragaria_vesca	FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850
malus_domestica	MD05G1308300.v1.1 MD10G1287300.v1.1 MD17G1234200.v1.1
prunus_persica	Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.4G054500_v2.0.a1 Prupe.4G054500_v2.0.a1
pyrus_communis	pycom05g28500 pycom10g24030 pycom17g23750
rosa_chinensis	RchiOBHm_Chr2g0128221 RchiOBHm_Chr5g0009511
rosa_laevigata	RLG00000018998 RLG00000031668
rosa_multiflora	Rmu_sc0000837.1_g000011 Rmu_sc0002711.1_g000012 Rmu_sc0003465.1_g000003
rosa_roxburghii	Rroxscaffold_1G00066620 Rroxscaffold_1G00067320 Rroxscaffold_2G00115480 Rroxscaffold_2G00115940
rosa_rugosa	Rorug02G0278700 Rorug04G0443800 Rorug04G0443800 Rorug04G0443900 Rorug04G0444000
rosa_samantha	Rh2AG331400 Rh2BG339600 Rh2CG317900 Rh2DG356500 Rh5AG074800 Rh5BG070600 Rh5CG083000 Rh5DG070800
rosa_wichuraiana	Rw2G026810 Rw5G006930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1152
AccII	CGCG	1 cut(s)	207
AciI	CCGC	5 cut(s)	19, 157, 205, 605, 1127
AclWI	GGATC	4 cut(s)	138, 1104, 1118, 1131
AcsI	RAATTY	2 cut(s)	1091, 1234
AcuI	CTGAAG	3 cut(s)	267, 645, 1124
AfaI	GTAC	2 cut(s)	592, 1166
AfeI	AGCGCT	1 cut(s)	765
AfiI	CCNNNNNNNGG	2 cut(s)	713, 1394
AflII	CTTAAG	1 cut(s)	821
AgsI	TTSAA	2 cut(s)	82, 404
AhlI	ACTAGT	1 cut(s)	629
AjnI	CCWGG	3 cut(s)	143, 781, 805
Alw21I	GWGCWC	2 cut(s)	225, 688
Alw26I	GTCTC	2 cut(s)	624, 918
Alw44I	GTGCAC	1 cut(s)	684
AlwI	GGATC	4 cut(s)	138, 1104, 1118, 1131
AlwNI	CAGNNNCTG	1 cut(s)	1268
Ama87I	CYCGRG	1 cut(s)	1392
Aor51HI	AGCGCT	1 cut(s)	765
AoxI	GGCC	5 cut(s)	673, 704, 817, 829, 1341
ApaLI	GTGCAC	1 cut(s)	684
ApeKI	GCWGC	6 cut(s)	253, 304, 344, 755, 842, 899
ApoI	RAATTY	2 cut(s)	1091, 1234
ArsI	GACNNNNNNTTYG	2 cut(s)	174, 206
Asp700I	GAANNNNTTC	2 cut(s)	1091, 1294
AspA2I	CCTAGG	1 cut(s)	701
AspLEI	GCGC	2 cut(s)	766, 1326
AspS9I	GGNCC	4 cut(s)	674, 776, 1341, 1433
AsuII	TTCGAA	1 cut(s)	44
AvaI	CYCGRG	1 cut(s)	1392
AvaII	GGWCC	2 cut(s)	776, 1433
AvrII	CCTAGG	1 cut(s)	701
BaeGI	GKGCMC	2 cut(s)	688, 1195
BamHI	GGATCC	1 cut(s)	1123
BanI	GGYRCC	1 cut(s)	1152
BanII	GRGCYC	1 cut(s)	225
Bbv12I	GWGCWC	2 cut(s)	225, 688
BbvI	GCAGC	6 cut(s)	265, 316, 331, 742, 829, 886
BccI	CCATC	3 cut(s)	201, 821, 1217
BceAI	ACGGC	2 cut(s)	217, 457
BciT130I	CCWGG	3 cut(s)	145, 783, 807
BclI	TGATCA	2 cut(s)	457, 562
BcoDI	GTCTC	2 cut(s)	624, 918
BcuI	ACTAGT	1 cut(s)	629
BfaI	CTAG	2 cut(s)	630, 702
BfmI	CTRYAG	3 cut(s)	574, 739, 1198
BfoI	RGCGCY	1 cut(s)	767
BfrI	CTTAAG	1 cut(s)	821
BisI	GCNGC	7 cut(s)	157, 254, 305, 345, 756, 843, 900
BlnI	CCTAGG	1 cut(s)	701
BlsI	GCNGC	7 cut(s)	158, 255, 306, 346, 757, 844, 901
Bme1390I	CCNGG	3 cut(s)	145, 783, 807
Bme18I	GGWCC	2 cut(s)	776, 1433
BmeT110I	CYCGRG	1 cut(s)	1392
BmgT120I	GGNCC	4 cut(s)	674, 776, 1341, 1433
BmiI	GGNNCC	3 cut(s)	792, 1125, 1154
BmrFI	CCNGG	3 cut(s)	145, 783, 807
BmsI	GCATC	7 cut(s)	157, 189, 316, 559, 601, 954, 1174
BoxI	GACNNNNGTC	1 cut(s)	291
BplI	GAGNNNNNCTC	2 cut(s)	1295, 1327
BpmI	CTGGAG	3 cut(s)	119, 777, 1259
Bpu10I	CCTNAGC	1 cut(s)	357
Bpu14I	TTCGAA	1 cut(s)	44
BpuEI	CTTGAG	2 cut(s)	696, 974
Bsa29I	ATCGAT	1 cut(s)	165
BsaJI	CCNNGG	4 cut(s)	701, 806, 917, 1239
Bsc4I	CCNNNNNNNGG	2 cut(s)	713, 1394
Bse118I	RCCGGY	1 cut(s)	494
Bse1I	ACTGG	3 cut(s)	136, 456, 794
Bse3DI	GCAATG	1 cut(s)	1333
BseBI	CCWGG	3 cut(s)	145, 783, 807
BseCI	ATCGAT	1 cut(s)	165
BseDI	CCNNGG	4 cut(s)	701, 806, 917, 1239
BseGI	GGATG	1 cut(s)	832
BseLI	CCNNNNNNNGG	2 cut(s)	713, 1394
BseMI	GCAATG	1 cut(s)	1333
BseMII	CTCAG	3 cut(s)	348, 876, 1293
BseNI	ACTGG	3 cut(s)	136, 456, 794
BseRI	GAGGAG	2 cut(s)	167, 329
BseSI	GKGCMC	2 cut(s)	688, 1195
BseXI	GCAGC	6 cut(s)	265, 316, 331, 742, 829, 886
BseYI	CCCAGC	1 cut(s)	238
BsgI	GTGCAG	1 cut(s)	330
Bsh1236I	CGCG	1 cut(s)	207
BshFI	GGCC	5 cut(s)	675, 706, 819, 831, 1343
BshNI	GGYRCC	1 cut(s)	1152
BshVI	ATCGAT	1 cut(s)	165
BsiHKAI	GWGCWC	2 cut(s)	225, 688
BsiHKCI	CYCGRG	1 cut(s)	1392
BsiSI	CCGG	1 cut(s)	495
BslFI	GGGAC	3 cut(s)	220, 1411, 1426
BslI	CCNNNNNNNGG	2 cut(s)	713, 1394
BsmAI	GTCTC	2 cut(s)	624, 918
BsmFI	GGGAC	3 cut(s)	220, 1411, 1426
BsmI	GAATGC	2 cut(s)	928, 1357
BsnI	GGCC	5 cut(s)	675, 706, 819, 831, 1343
BsoBI	CYCGRG	1 cut(s)	1392
Bsp119I	TTCGAA	1 cut(s)	44
Bsp1286I	GDGCHC	3 cut(s)	225, 688, 1195
Bsp143I	GATC	9 cut(s)	130, 367, 457, 562, 940, 1109, 1123, 1170, 1270
Bsp19I	CCATGG	1 cut(s)	917
BspACI	CCGC	5 cut(s)	19, 157, 205, 605, 1127
BspANI	GGCC	5 cut(s)	675, 706, 819, 831, 1343
BspCNI	CTCAG	3 cut(s)	349, 877, 1294
BspDI	ATCGAT	1 cut(s)	165
BspFNI	CGCG	1 cut(s)	207
BspLI	GGNNCC	3 cut(s)	792, 1125, 1154
BspMAI	CTGCAG	1 cut(s)	743
BspPI	GGATC	4 cut(s)	138, 1104, 1118, 1131
BspQI	GCTCTTC	3 cut(s)	41, 83, 994
BspT104I	TTCGAA	1 cut(s)	44
BspT107I	GGYRCC	1 cut(s)	1152
BspTI	CTTAAG	1 cut(s)	821
BsrDI	GCAATG	1 cut(s)	1333
BsrFI	RCCGGY	1 cut(s)	494
BsrI	ACTGG	3 cut(s)	136, 456, 794
BssAI	RCCGGY	1 cut(s)	494
BssECI	CCNNGG	4 cut(s)	701, 806, 917, 1239
BssMI	GATC	9 cut(s)	130, 367, 457, 562, 940, 1109, 1123, 1170, 1270
BssT1I	CCWWGG	3 cut(s)	701, 917, 1239
Bst2UI	CCWGG	3 cut(s)	145, 783, 807
Bst4CI	ACNGT	3 cut(s)	101, 578, 1375
Bst6I	CTCTTC	5 cut(s)	41, 83, 286, 994, 1100
BstAFI	CTTAAG	1 cut(s)	821
BstBI	TTCGAA	1 cut(s)	44
BstC8I	GCNNGC	4 cut(s)	331, 607, 708, 833
BstDEI	CTNAG	7 cut(s)	357, 670, 848, 885, 1250, 1302, 1463
BstDSI	CCRYGG	1 cut(s)	917
BstENI	CCTNNNNNAGG	1 cut(s)	711
BstF5I	GGATG	1 cut(s)	832
BstFNI	CGCG	1 cut(s)	207
BstH2I	RGCGCY	1 cut(s)	767
BstHHI	GCGC	2 cut(s)	766, 1326
BstKTI	GATC	9 cut(s)	133, 370, 460, 565, 943, 1112, 1126, 1173, 1273
BstMAI	GTCTC	2 cut(s)	624, 918
BstMBI	GATC	9 cut(s)	130, 367, 457, 562, 940, 1109, 1123, 1170, 1270
BstMWI	GCNNNNNNNGC	7 cut(s)	229, 304, 602, 611, 761, 851, 905
BstNI	CCWGG	3 cut(s)	145, 783, 807
BstNSI	RCATGY	1 cut(s)	124
BstPAI	GACNNNNGTC	1 cut(s)	291
BstSCI	CCNGG	3 cut(s)	143, 781, 805
BstSFI	CTRYAG	3 cut(s)	574, 739, 1198
BstSLI	GKGCMC	2 cut(s)	688, 1195
BstUI	CGCG	1 cut(s)	207
BstV1I	GCAGC	6 cut(s)	265, 316, 331, 742, 829, 886
BstX2I	RGATCY	3 cut(s)	130, 1109, 1123
BstYI	RGATCY	3 cut(s)	130, 1109, 1123
Bsu15I	ATCGAT	1 cut(s)	165
BsuRI	GGCC	5 cut(s)	675, 706, 819, 831, 1343
BsuTUI	ATCGAT	1 cut(s)	165
BtgI	CCRYGG	1 cut(s)	917
BtgZI	GCGATG	1 cut(s)	624
BtsCI	GGATG	1 cut(s)	832
BtsI	GCAGTG	1 cut(s)	496
BtsIMutI	CAGTG	3 cut(s)	421, 449, 496
Cac8I	GCNNGC	4 cut(s)	331, 607, 708, 833
CaiI	CAGNNNCTG	1 cut(s)	1268
CfoI	GCGC	2 cut(s)	766, 1326
Cfr10I	RCCGGY	1 cut(s)	494
Cfr13I	GGNCC	4 cut(s)	674, 776, 1341, 1433
ClaI	ATCGAT	1 cut(s)	165
Csp6I	GTAC	2 cut(s)	591, 1165
CspCI	CAANNNNNGTGG	2 cut(s)	1447, 1482
CviAII	CATG	7 cut(s)	121, 127, 623, 752, 787, 918, 1064
CviQI	GTAC	2 cut(s)	591, 1165
DdeI	CTNAG	7 cut(s)	357, 670, 848, 885, 1250, 1302, 1463
DpnI	GATC	9 cut(s)	132, 369, 459, 564, 942, 1111, 1125, 1172, 1272
DpnII	GATC	9 cut(s)	130, 367, 457, 562, 940, 1109, 1123, 1170, 1270
Eam1104I	CTCTTC	5 cut(s)	41, 83, 286, 994, 1100
EarI	CTCTTC	5 cut(s)	41, 83, 286, 994, 1100
Ecl136II	GAGCTC	1 cut(s)	223
Eco130I	CCWWGG	3 cut(s)	701, 917, 1239
Eco147I	AGGCCT	1 cut(s)	706
Eco24I	GRGCYC	1 cut(s)	225
Eco47I	GGWCC	2 cut(s)	776, 1433
Eco47III	AGCGCT	1 cut(s)	765
Eco53kI	GAGCTC	1 cut(s)	223
Eco57I	CTGAAG	3 cut(s)	267, 645, 1124
Eco88I	CYCGRG	1 cut(s)	1392
EcoICRI	GAGCTC	1 cut(s)	223
EcoNI	CCTNNNNNAGG	1 cut(s)	711
EcoRI	GAATTC	1 cut(s)	1091
EcoRII	CCWGG	3 cut(s)	143, 781, 805
EcoT14I	CCWWGG	3 cut(s)	701, 917, 1239
EcoT22I	ATGCAT	1 cut(s)	616
EcoT38I	GRGCYC	1 cut(s)	225
ErhI	CCWWGG	3 cut(s)	701, 917, 1239
FaeI	CATG	7 cut(s)	124, 130, 626, 755, 790, 921, 1067
FaqI	GGGAC	3 cut(s)	220, 1411, 1426
FatI	CATG	7 cut(s)	120, 126, 622, 751, 786, 917, 1063
FauI	CCCGC	2 cut(s)	12, 598
FauNDI	CATATG	1 cut(s)	1441
FbaI	TGATCA	2 cut(s)	457, 562
Fnu4HI	GCNGC	7 cut(s)	157, 254, 305, 345, 756, 843, 900
FokI	GGATG	1 cut(s)	839
FriOI	GRGCYC	1 cut(s)	225
Fsp4HI	GCNGC	7 cut(s)	157, 254, 305, 345, 756, 843, 900
FspBI	CTAG	2 cut(s)	630, 702
GlaI	GCGC	2 cut(s)	765, 1325
GluI	GCNGC	7 cut(s)	157, 254, 305, 345, 756, 843, 900
GsaI	CCCAGC	1 cut(s)	242
GsuI	CTGGAG	3 cut(s)	119, 777, 1259
HaeII	RGCGCY	1 cut(s)	767
HaeIII	GGCC	5 cut(s)	675, 706, 819, 831, 1343
HapII	CCGG	1 cut(s)	495
HhaI	GCGC	2 cut(s)	766, 1326
Hin1II	CATG	7 cut(s)	124, 130, 626, 755, 790, 921, 1067
Hin6I	GCGC	2 cut(s)	764, 1324
HinP1I	GCGC	2 cut(s)	764, 1324
HincII	GTYRAC	2 cut(s)	502, 1456
HindII	GTYRAC	2 cut(s)	502, 1456
HinfI	GANTC	4 cut(s)	421, 879, 1067, 1259
HpaI	GTTAAC	1 cut(s)	502
HpaII	CCGG	1 cut(s)	495
Hpy166II	GTNNAC	4 cut(s)	502, 686, 1436, 1456
Hpy188I	TCNGA	7 cut(s)	198, 220, 286, 372, 386, 1097, 1315
Hpy188III	TCNNGA	6 cut(s)	404, 554, 731, 953, 971, 1276
Hpy8I	GTNNAC	4 cut(s)	502, 686, 1436, 1456
HpyAV	CCTTC	7 cut(s)	31, 142, 506, 669, 767, 1284, 1327
HpyCH4III	ACNGT	3 cut(s)	101, 578, 1375
HpyF10VI	GCNNNNNNNGC	7 cut(s)	229, 304, 602, 611, 761, 851, 905
HpyF3I	CTNAG	7 cut(s)	357, 670, 848, 885, 1250, 1302, 1463
Hsp92II	CATG	7 cut(s)	124, 130, 626, 755, 790, 921, 1067
HspAI	GCGC	2 cut(s)	764, 1324
Ksp22I	TGATCA	2 cut(s)	457, 562
KspAI	GTTAAC	1 cut(s)	502
Kzo9I	GATC	9 cut(s)	130, 367, 457, 562, 940, 1109, 1123, 1170, 1270
LguI	GCTCTTC	3 cut(s)	41, 83, 994
LmnI	GCTCC	4 cut(s)	207, 476, 796, 896
Lsp1109I	GCAGC	6 cut(s)	265, 316, 331, 742, 829, 886
LweI	GCATC	7 cut(s)	157, 189, 316, 559, 601, 954, 1174
MaeI	CTAG	2 cut(s)	630, 702
MaeIII	GTNAC	3 cut(s)	7, 625, 1016
MalI	GATC	9 cut(s)	132, 369, 459, 564, 942, 1111, 1125, 1172, 1272
MboI	GATC	9 cut(s)	130, 367, 457, 562, 940, 1109, 1123, 1170, 1270
MboII	GAAGA	9 cut(s)	58, 70, 194, 237, 273, 332, 1011, 1117, 1240
MfeI	CAATTG	2 cut(s)	52, 524
MflI	RGATCY	3 cut(s)	130, 1109, 1123
MhlI	GDGCHC	3 cut(s)	225, 688, 1195
MluCI	AATT	6 cut(s)	52, 374, 505, 524, 1091, 1234
MlyI	GAGTC	1 cut(s)	1076
MmeI	TCCRAC	5 cut(s)	364, 699, 856, 1348, 1412
Mph1103I	ATGCAT	1 cut(s)	616
MroXI	GAANNNNTTC	2 cut(s)	1091, 1294
MseI	TTAA	3 cut(s)	501, 585, 822
MslI	CAYNNNNRTG	2 cut(s)	125, 1158
MspCI	CTTAAG	1 cut(s)	821
MspI	CCGG	1 cut(s)	495
MspR9I	CCNGG	3 cut(s)	145, 783, 807
MunI	CAATTG	2 cut(s)	52, 524
Mva1269I	GAATGC	2 cut(s)	928, 1357
MvaI	CCWGG	3 cut(s)	145, 783, 807
MvnI	CGCG	1 cut(s)	207
MwoI	GCNNNNNNNGC	7 cut(s)	229, 304, 602, 611, 761, 851, 905
NcoI	CCATGG	1 cut(s)	917
NdeI	CATATG	1 cut(s)	1441
NdeII	GATC	9 cut(s)	130, 367, 457, 562, 940, 1109, 1123, 1170, 1270
NlaIII	CATG	7 cut(s)	124, 130, 626, 755, 790, 921, 1067
NlaIV	GGNNCC	3 cut(s)	792, 1125, 1154
NmuCI	GTSAC	2 cut(s)	7, 625
NsiI	ATGCAT	1 cut(s)	616
NspI	RCATGY	1 cut(s)	124
NspV	TTCGAA	1 cut(s)	44
PaeR7I	CTCGAG	1 cut(s)	1392
PceI	AGGCCT	1 cut(s)	706
PciSI	GCTCTTC	3 cut(s)	41, 83, 994
PctI	GAATGC	2 cut(s)	928, 1357
PdmI	GAANNNNTTC	2 cut(s)	1091, 1294
PfeI	GAWTC	3 cut(s)	421, 879, 1259
PkrI	GCNGC	7 cut(s)	158, 255, 306, 346, 757, 844, 901
PleI	GAGTC	1 cut(s)	1075
PpsI	GAGTC	1 cut(s)	1075
PshAI	GACNNNNGTC	1 cut(s)	291
Psp124BI	GAGCTC	1 cut(s)	225
Psp6I	CCWGG	3 cut(s)	143, 781, 805
PspFI	CCCAGC	1 cut(s)	238
PspGI	CCWGG	3 cut(s)	143, 781, 805
PspN4I	GGNNCC	3 cut(s)	792, 1125, 1154
PspPI	GGNCC	4 cut(s)	674, 776, 1341, 1433
PspXI	VCTCGAGB	1 cut(s)	1392
PsrI	GAACNNNNNNTAC	2 cut(s)	256, 288
PstI	CTGCAG	1 cut(s)	743
PstNI	CAGNNNCTG	1 cut(s)	1268
PsuI	RGATCY	3 cut(s)	130, 1109, 1123
RsaI	GTAC	2 cut(s)	592, 1166
RsaNI	GTAC	2 cut(s)	591, 1165
RseI	CAYNNNNRTG	2 cut(s)	125, 1158
SacI	GAGCTC	1 cut(s)	225
SapI	GCTCTTC	3 cut(s)	41, 83, 994
SaqAI	TTAA	3 cut(s)	501, 585, 822
SatI	GCNGC	7 cut(s)	157, 254, 305, 345, 756, 843, 900
Sau3AI	GATC	9 cut(s)	130, 367, 457, 562, 940, 1109, 1123, 1170, 1270
Sau96I	GGNCC	4 cut(s)	674, 776, 1341, 1433
SchI	GAGTC	1 cut(s)	1076
ScrFI	CCNGG	3 cut(s)	145, 783, 807
SduI	GDGCHC	3 cut(s)	225, 688, 1195
SfaNI	GCATC	7 cut(s)	157, 189, 316, 559, 601, 954, 1174
SfcI	CTRYAG	3 cut(s)	574, 739, 1198
Sfr274I	CTCGAG	1 cut(s)	1392
SfuI	TTCGAA	1 cut(s)	44
SinI	GGWCC	2 cut(s)	776, 1433
SlaI	CTCGAG	1 cut(s)	1392
SmiMI	CAYNNNNRTG	2 cut(s)	125, 1158
SmlI	CTYRAG	4 cut(s)	711, 821, 953, 1392
SmoI	CTYRAG	4 cut(s)	711, 821, 953, 1392
SpeI	ACTAGT	1 cut(s)	629
Sse9I	AATT	6 cut(s)	52, 374, 505, 524, 1091, 1234
SseBI	AGGCCT	1 cut(s)	706
SsiI	CCGC	5 cut(s)	19, 157, 205, 605, 1127
SspMI	CTAG	2 cut(s)	630, 702
SstI	GAGCTC	1 cut(s)	225
StuI	AGGCCT	1 cut(s)	706
StyD4I	CCNGG	3 cut(s)	143, 781, 805
StyI	CCWWGG	3 cut(s)	701, 917, 1239
TaaI	ACNGT	3 cut(s)	101, 578, 1375
TaqI	TCGA	6 cut(s)	44, 105, 165, 180, 997, 1393
TasI	AATT	6 cut(s)	52, 374, 505, 524, 1091, 1234
TauI	GCSGC	1 cut(s)	159
TfiI	GAWTC	3 cut(s)	421, 879, 1259
Tru1I	TTAA	3 cut(s)	501, 585, 822
Tru9I	TTAA	3 cut(s)	501, 585, 822
TscAI	CASTG	3 cut(s)	421, 456, 496
TseFI	GTSAC	2 cut(s)	7, 625
TseI	GCWGC	6 cut(s)	253, 304, 344, 755, 842, 899
Tsp45I	GTSAC	2 cut(s)	7, 625
TspDTI	ATGAA	5 cut(s)	115, 740, 786, 1100, 1104
TspRI	CASTG	3 cut(s)	421, 456, 496
Vha464I	CTTAAG	1 cut(s)	821
VneI	GTGCAC	1 cut(s)	684
VpaK11BI	GGWCC	2 cut(s)	776, 1433
XagI	CCTNNNNNAGG	1 cut(s)	711
XapI	RAATTY	2 cut(s)	1091, 1234
XceI	RCATGY	1 cut(s)	124
XhoI	CTCGAG	1 cut(s)	1392
XmaJI	CCTAGG	1 cut(s)	701
XmnI	GAANNNNTTC	2 cut(s)	1091, 1294
XspI	CTAG	2 cut(s)	630, 702
Zsp2I	ATGCAT	1 cut(s)	616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.