Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001263

Physical Location & Seq

Genomic Coordinates Reverse (-)

88142636 .. 88145677

Gene Structure 3042 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00066620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGAGGAAGGGTTCGAAGAGCAATTGCAAGTCGGTTTCTCATAAGCTCTTCAAGGACAAAGCCAAGAACCGTGTCGATGACTTGCAGGGCATGTTCATGGATCTCCAGTTTGCCAGGAAGGAGAGCCGCACTATCGATGCCACCCTCCTCGAAGAACAAGTCCATCAGATGCTCCGCGAATGGAAATCCGAGCTGAATGAGCCGTCCCCAGCTTCTTCTTTGCAGCAAGGTGGTAGTGTTGGTTCGTTCTCTTCAGACATTTGTCGGCTGTTGCAGCTTTGTGAGGAGGAAGATGATGCCAGCAGTCCATTAGCTGCACCAAAACCTGAGCCTAACGATCAGAAATTGGAAGTTGGAGAGAGGCAAAAGCTCCCTTTAGGAGTTCGCAGTGCCGGTGTTAACAATTTGGAAGGGGCTAATCAATTGGACTATCAGCAGTTTGACTTGCGTCAAGACTTTGATCACAACTACTACAGTTGTTTTAATGGTACAGCTCTGAGTGTGGGTGATGCATTGTCTCATGTCACTAGTTATCTACCAAGTATATGCCCTCCACCTTCAGCTTTCTTAGGCCCAAAGTGCGCACTTTGGGATTGTCCTAGGCCTGCTCAAGGGTTGGACTGGTGTCAAGACTACTGCAGTAGCTTTCATGCTGCCTTAGCGTTGAATGAAGGACCACCTGGCATGGCTCCAGTCCTACGACCTGGGGGCATTGGCCTTAAGGATGGCCTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGAATCCCTGAGTGTGAGGGAGCTGCTACTGCAAAGTCTCCATGGAATGCACCTGAACTCTTTGATCTTTTGGTTCTTGAGGGAGAGATGCTTCGGGAATGGCTCTTTTTTGACAAGCCTCGAAGAGCTTTTGAGAGTGGTAACAGAAAGCAGAGGTCGTTGCCAGATTACAACGGACGAGGTTGGCATGAGTCAAGGAAGCAAGTGATGAATGAATTTGGAGGGCTGAAGAGATCCTATTATATGGATCCGCAACCTCTGAACCATTTTGAGTGGCACCTTTATGAATACGAGATCAACAAGTGTGATGCTTGTGCCCTCTATAGATTGGAACTGAAACTTGTCGATGGGAAGAAAAATTCCAAGGGGAAACTAAGTAATGATTCAGTTGCTGATCTCCAGAAGCAAATGGGAAGGCTTTCTGCTGAGTTCCCCTCTGATAACAAGCGCAATGTGAAGGGCAGGGCCAAAGTGAATGCAAAGGTTGGTGTTGGAACTGTCTATTACACTCCAACCCGAGGGACAGCAGCAAATGGGACATTTGACTATGGAACTGGTCCACCATATGATTATCTTGTTGACAATCTAAGTGGCTATTACCTAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002376 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009631 GO:0009648 GO:0009791 GO:0009814 GO:0009816 GO:0009889 GO:0009891 GO:0009893 GO:0010035 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0042742 GO:0043207 GO:0043565 GO:0045087 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

460

Amino Acids

51.18

Weight (kDa)

6.29

Isoelectric Point (pI)

45.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001263)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28520 AT1G28520 AT1G28520 AT1G28520 AT1G28520
fragaria_vesca	FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850
malus_domestica	MD05G1308300.v1.1 MD10G1287300.v1.1 MD17G1234200.v1.1
prunus_persica	Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.4G054500_v2.0.a1 Prupe.4G054500_v2.0.a1
pyrus_communis	pycom05g28500 pycom10g24030 pycom17g23750
rosa_chinensis	RchiOBHm_Chr2g0128221 RchiOBHm_Chr5g0009511
rosa_laevigata	RLG00000018998 RLG00000031668
rosa_multiflora	Rmu_sc0000837.1_g000011 Rmu_sc0002711.1_g000012 Rmu_sc0003465.1_g000003
rosa_roxburghii	Rroxscaffold_1G00066620 Rroxscaffold_1G00067320 Rroxscaffold_2G00115480 Rroxscaffold_2G00115940
rosa_rugosa	Rorug02G0278700 Rorug04G0443800 Rorug04G0443800 Rorug04G0443900 Rorug04G0444000
rosa_samantha	Rh2AG331400 Rh2BG339600 Rh2CG317900 Rh2DG356500 Rh5AG074800 Rh5BG070600 Rh5CG083000 Rh5DG070800
rosa_wichuraiana	Rw2G026810 Rw5G006930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	583
AccB1I	GGYRCC	1 cut(s)	1050
AccII	CGCG	1 cut(s)	177
AciI	CCGC	3 cut(s)	127, 175, 1025
AclWI	GGATC	4 cut(s)	108, 1002, 1016, 1029
AcsI	RAATTY	2 cut(s)	989, 1132
AcuI	CTGAAG	3 cut(s)	237, 543, 1022
AfaI	GTAC	1 cut(s)	490
AfiI	CCNNNNNNNGG	2 cut(s)	611, 1292
AflII	CTTAAG	1 cut(s)	719
AgsI	TTSAA	2 cut(s)	52, 667
AhlI	ACTAGT	1 cut(s)	527
AjnI	CCWGG	3 cut(s)	113, 679, 703
Alw26I	GTCTC	2 cut(s)	522, 816
AlwI	GGATC	4 cut(s)	108, 1002, 1016, 1029
AlwNI	CAGNNNCTG	1 cut(s)	1166
Ama87I	CYCGRG	1 cut(s)	1290
AoxI	GGCC	5 cut(s)	571, 602, 715, 727, 1239
ApeKI	GCWGC	7 cut(s)	223, 274, 314, 653, 740, 797, 1301
ApoI	RAATTY	2 cut(s)	989, 1132
ArsI	GACNNNNNNTTYG	2 cut(s)	144, 176
Asp700I	GAANNNNTTC	1 cut(s)	1192
AspA2I	CCTAGG	1 cut(s)	599
AspLEI	GCGC	2 cut(s)	584, 1224
AspS9I	GGNCC	4 cut(s)	572, 674, 1239, 1331
AsuHPI	GGTGA	1 cut(s)	518
AsuII	TTCGAA	1 cut(s)	14
AvaI	CYCGRG	1 cut(s)	1290
AvaII	GGWCC	2 cut(s)	674, 1331
AvrII	CCTAGG	1 cut(s)	599
BaeGI	GKGCMC	1 cut(s)	1093
BamHI	GGATCC	1 cut(s)	1021
BanI	GGYRCC	1 cut(s)	1050
BbvI	GCAGC	7 cut(s)	235, 286, 301, 640, 727, 784, 1313
BccI	CCATC	3 cut(s)	171, 719, 1115
BceAI	ACGGC	1 cut(s)	187
BciT130I	CCWGG	3 cut(s)	115, 681, 705
BclI	TGATCA	1 cut(s)	460
BcoDI	GTCTC	2 cut(s)	522, 816
BcuI	ACTAGT	1 cut(s)	527
BfaI	CTAG	2 cut(s)	528, 600
BfmI	CTRYAG	3 cut(s)	472, 637, 1096
BfrI	CTTAAG	1 cut(s)	719
BisI	GCNGC	8 cut(s)	127, 224, 275, 315, 654, 741, 798, 1302
BlnI	CCTAGG	1 cut(s)	599
BlsI	GCNGC	8 cut(s)	128, 225, 276, 316, 655, 742, 799, 1303
Bme1390I	CCNGG	3 cut(s)	115, 681, 705
Bme18I	GGWCC	2 cut(s)	674, 1331
BmeT110I	CYCGRG	1 cut(s)	1290
BmgT120I	GGNCC	4 cut(s)	572, 674, 1239, 1331
BmiI	GGNNCC	3 cut(s)	690, 1023, 1052
BmrFI	CCNGG	3 cut(s)	115, 681, 705
BmsI	GCATC	6 cut(s)	127, 159, 286, 499, 852, 1072
BoxI	GACNNNNGTC	3 cut(s)	261, 447, 624
BplI	GAGNNNNNCTC	2 cut(s)	1193, 1225
BpmI	CTGGAG	3 cut(s)	89, 675, 1157
Bpu10I	CCTNAGC	2 cut(s)	327, 658
Bpu14I	TTCGAA	1 cut(s)	14
BpuEI	CTTGAG	2 cut(s)	594, 872
Bsa29I	ATCGAT	1 cut(s)	135
BsaJI	CCNNGG	5 cut(s)	599, 704, 815, 1137, 1291
Bsc4I	CCNNNNNNNGG	2 cut(s)	611, 1292
Bse118I	RCCGGY	1 cut(s)	392
Bse1I	ACTGG	4 cut(s)	106, 626, 692, 1333
Bse3DI	GCAATG	1 cut(s)	1231
BseBI	CCWGG	3 cut(s)	115, 681, 705
BseCI	ATCGAT	1 cut(s)	135
BseDI	CCNNGG	5 cut(s)	599, 704, 815, 1137, 1291
BseGI	GGATG	1 cut(s)	730
BseLI	CCNNNNNNNGG	2 cut(s)	611, 1292
BseMI	GCAATG	1 cut(s)	1231
BseMII	CTCAG	4 cut(s)	318, 488, 774, 1191
BseNI	ACTGG	4 cut(s)	106, 626, 692, 1333
BseRI	GAGGAG	2 cut(s)	137, 299
BseSI	GKGCMC	1 cut(s)	1093
BseXI	GCAGC	7 cut(s)	235, 286, 301, 640, 727, 784, 1313
BseYI	CCCAGC	1 cut(s)	208
BsgI	GTGCAG	1 cut(s)	300
Bsh1236I	CGCG	1 cut(s)	177
BshFI	GGCC	5 cut(s)	573, 604, 717, 729, 1241
BshNI	GGYRCC	1 cut(s)	1050
BshVI	ATCGAT	1 cut(s)	135
BsiHKCI	CYCGRG	1 cut(s)	1290
BsiSI	CCGG	1 cut(s)	393
BslFI	GGGAC	3 cut(s)	190, 1309, 1324
BslI	CCNNNNNNNGG	2 cut(s)	611, 1292
BsmAI	GTCTC	2 cut(s)	522, 816
BsmFI	GGGAC	3 cut(s)	190, 1309, 1324
BsmI	GAATGC	2 cut(s)	826, 1255
BsnI	GGCC	5 cut(s)	573, 604, 717, 729, 1241
BsoBI	CYCGRG	1 cut(s)	1290
Bsp119I	TTCGAA	1 cut(s)	14
Bsp1286I	GDGCHC	1 cut(s)	1093
Bsp143I	GATC	8 cut(s)	100, 337, 460, 838, 1007, 1021, 1068, 1168
Bsp19I	CCATGG	1 cut(s)	815
BspACI	CCGC	3 cut(s)	127, 175, 1025
BspANI	GGCC	5 cut(s)	573, 604, 717, 729, 1241
BspCNI	CTCAG	4 cut(s)	319, 489, 775, 1192
BspDI	ATCGAT	1 cut(s)	135
BspFNI	CGCG	1 cut(s)	177
BspLI	GGNNCC	3 cut(s)	690, 1023, 1052
BspMAI	CTGCAG	1 cut(s)	641
BspPI	GGATC	4 cut(s)	108, 1002, 1016, 1029
BspQI	GCTCTTC	3 cut(s)	11, 53, 892
BspT104I	TTCGAA	1 cut(s)	14
BspT107I	GGYRCC	1 cut(s)	1050
BspTI	CTTAAG	1 cut(s)	719
BsrDI	GCAATG	1 cut(s)	1231
BsrFI	RCCGGY	1 cut(s)	392
BsrI	ACTGG	4 cut(s)	106, 626, 692, 1333
BssAI	RCCGGY	1 cut(s)	392
BssECI	CCNNGG	5 cut(s)	599, 704, 815, 1137, 1291
BssMI	GATC	8 cut(s)	100, 337, 460, 838, 1007, 1021, 1068, 1168
BssT1I	CCWWGG	3 cut(s)	599, 815, 1137
Bst2UI	CCWGG	3 cut(s)	115, 681, 705
Bst4CI	ACNGT	3 cut(s)	71, 476, 1273
Bst6I	CTCTTC	5 cut(s)	11, 53, 256, 892, 998
BstAFI	CTTAAG	1 cut(s)	719
BstBI	TTCGAA	1 cut(s)	14
BstC8I	GCNNGC	2 cut(s)	301, 606
BstDEI	CTNAG	9 cut(s)	327, 497, 568, 658, 746, 783, 1148, 1200, 1361
BstDSI	CCRYGG	1 cut(s)	815
BstENI	CCTNNNNNAGG	1 cut(s)	609
BstF5I	GGATG	1 cut(s)	730
BstFNI	CGCG	1 cut(s)	177
BstHHI	GCGC	2 cut(s)	584, 1224
BstKTI	GATC	8 cut(s)	103, 340, 463, 841, 1010, 1024, 1071, 1171
BstMAI	GTCTC	2 cut(s)	522, 816
BstMBI	GATC	8 cut(s)	100, 337, 460, 838, 1007, 1021, 1068, 1168
BstMWI	GCNNNNNNNGC	6 cut(s)	199, 274, 579, 659, 749, 803
BstNI	CCWGG	3 cut(s)	115, 681, 705
BstNSI	RCATGY	1 cut(s)	94
BstPAI	GACNNNNGTC	3 cut(s)	261, 447, 624
BstSCI	CCNGG	3 cut(s)	113, 679, 703
BstSFI	CTRYAG	3 cut(s)	472, 637, 1096
BstSLI	GKGCMC	1 cut(s)	1093
BstUI	CGCG	1 cut(s)	177
BstV1I	GCAGC	7 cut(s)	235, 286, 301, 640, 727, 784, 1313
BstX2I	RGATCY	3 cut(s)	100, 1007, 1021
BstYI	RGATCY	3 cut(s)	100, 1007, 1021
Bsu15I	ATCGAT	1 cut(s)	135
BsuRI	GGCC	5 cut(s)	573, 604, 717, 729, 1241
BsuTUI	ATCGAT	1 cut(s)	135
BtgI	CCRYGG	1 cut(s)	815
BtsCI	GGATG	1 cut(s)	730
BtsI	GCAGTG	1 cut(s)	394
BtsIMutI	CAGTG	1 cut(s)	394
Cac8I	GCNNGC	2 cut(s)	301, 606
CaiI	CAGNNNCTG	1 cut(s)	1166
CfoI	GCGC	2 cut(s)	584, 1224
Cfr10I	RCCGGY	1 cut(s)	392
Cfr13I	GGNCC	4 cut(s)	572, 674, 1239, 1331
ClaI	ATCGAT	1 cut(s)	135
CseI	GACGC	1 cut(s)	437
Csp6I	GTAC	1 cut(s)	489
CspCI	CAANNNNNGTGG	2 cut(s)	1345, 1380
CviAII	CATG	7 cut(s)	91, 97, 521, 650, 685, 816, 962
CviQI	GTAC	1 cut(s)	489
DdeI	CTNAG	9 cut(s)	327, 497, 568, 658, 746, 783, 1148, 1200, 1361
DpnI	GATC	8 cut(s)	102, 339, 462, 840, 1009, 1023, 1070, 1170
DpnII	GATC	8 cut(s)	100, 337, 460, 838, 1007, 1021, 1068, 1168
Eam1104I	CTCTTC	5 cut(s)	11, 53, 256, 892, 998
EarI	CTCTTC	5 cut(s)	11, 53, 256, 892, 998
Eco130I	CCWWGG	3 cut(s)	599, 815, 1137
Eco147I	AGGCCT	1 cut(s)	604
Eco47I	GGWCC	2 cut(s)	674, 1331
Eco57I	CTGAAG	3 cut(s)	237, 543, 1022
Eco88I	CYCGRG	1 cut(s)	1290
EcoNI	CCTNNNNNAGG	1 cut(s)	609
EcoRII	CCWGG	3 cut(s)	113, 679, 703
EcoT14I	CCWWGG	3 cut(s)	599, 815, 1137
EcoT22I	ATGCAT	1 cut(s)	514
ErhI	CCWWGG	3 cut(s)	599, 815, 1137
FaeI	CATG	7 cut(s)	94, 100, 524, 653, 688, 819, 965
FaqI	GGGAC	3 cut(s)	190, 1309, 1324
FatI	CATG	7 cut(s)	90, 96, 520, 649, 684, 815, 961
FauNDI	CATATG	1 cut(s)	1339
FbaI	TGATCA	1 cut(s)	460
Fnu4HI	GCNGC	8 cut(s)	127, 224, 275, 315, 654, 741, 798, 1302
FokI	GGATG	1 cut(s)	737
Fsp4HI	GCNGC	8 cut(s)	127, 224, 275, 315, 654, 741, 798, 1302
FspAI	RTGCGCAY	1 cut(s)	583
FspBI	CTAG	2 cut(s)	528, 600
FspI	TGCGCA	1 cut(s)	583
GlaI	GCGC	2 cut(s)	583, 1223
GluI	GCNGC	8 cut(s)	127, 224, 275, 315, 654, 741, 798, 1302
GsaI	CCCAGC	1 cut(s)	212
GsuI	CTGGAG	3 cut(s)	89, 675, 1157
HaeIII	GGCC	5 cut(s)	573, 604, 717, 729, 1241
HapII	CCGG	1 cut(s)	393
HgaI	GACGC	1 cut(s)	437
HhaI	GCGC	2 cut(s)	584, 1224
Hin1II	CATG	7 cut(s)	94, 100, 524, 653, 688, 819, 965
Hin6I	GCGC	2 cut(s)	582, 1222
HinP1I	GCGC	2 cut(s)	582, 1222
HincII	GTYRAC	2 cut(s)	400, 1354
HindII	GTYRAC	2 cut(s)	400, 1354
HinfI	GANTC	3 cut(s)	777, 965, 1157
HpaI	GTTAAC	1 cut(s)	400
HpaII	CCGG	1 cut(s)	393
HphI	GGTGA	1 cut(s)	518
Hpy166II	GTNNAC	3 cut(s)	400, 1334, 1354
Hpy188I	TCNGA	7 cut(s)	168, 190, 256, 342, 498, 1035, 1213
Hpy188III	TCNNGA	5 cut(s)	452, 629, 851, 869, 1174
Hpy8I	GTNNAC	3 cut(s)	400, 1334, 1354
HpyAV	CCTTC	6 cut(s)	112, 404, 567, 665, 1182, 1225
HpyCH4III	ACNGT	3 cut(s)	71, 476, 1273
HpyF10VI	GCNNNNNNNGC	6 cut(s)	199, 274, 579, 659, 749, 803
HpyF3I	CTNAG	9 cut(s)	327, 497, 568, 658, 746, 783, 1148, 1200, 1361
Hsp92II	CATG	7 cut(s)	94, 100, 524, 653, 688, 819, 965
HspAI	GCGC	2 cut(s)	582, 1222
Ksp22I	TGATCA	1 cut(s)	460
KspAI	GTTAAC	1 cut(s)	400
Kzo9I	GATC	8 cut(s)	100, 337, 460, 838, 1007, 1021, 1068, 1168
LguI	GCTCTTC	3 cut(s)	11, 53, 892
LmnI	GCTCC	4 cut(s)	177, 375, 694, 794
Lsp1109I	GCAGC	7 cut(s)	235, 286, 301, 640, 727, 784, 1313
LweI	GCATC	6 cut(s)	127, 159, 286, 499, 852, 1072
MaeI	CTAG	2 cut(s)	528, 600
MaeIII	GTNAC	2 cut(s)	523, 914
MalI	GATC	8 cut(s)	102, 339, 462, 840, 1009, 1023, 1070, 1170
MboI	GATC	8 cut(s)	100, 337, 460, 838, 1007, 1021, 1068, 1168
MboII	GAAGA	9 cut(s)	28, 40, 164, 207, 243, 302, 909, 1015, 1138
MfeI	CAATTG	2 cut(s)	22, 422
MflI	RGATCY	3 cut(s)	100, 1007, 1021
MhlI	GDGCHC	1 cut(s)	1093
MluCI	AATT	6 cut(s)	22, 344, 403, 422, 989, 1132
MlyI	GAGTC	1 cut(s)	974
MmeI	TCCRAC	5 cut(s)	334, 597, 754, 1246, 1310
Mph1103I	ATGCAT	1 cut(s)	514
MroXI	GAANNNNTTC	1 cut(s)	1192
MseI	TTAA	3 cut(s)	399, 483, 720
MslI	CAYNNNNRTG	2 cut(s)	95, 1056
MspCI	CTTAAG	1 cut(s)	719
MspI	CCGG	1 cut(s)	393
MspR9I	CCNGG	3 cut(s)	115, 681, 705
MunI	CAATTG	2 cut(s)	22, 422
Mva1269I	GAATGC	2 cut(s)	826, 1255
MvaI	CCWGG	3 cut(s)	115, 681, 705
MvnI	CGCG	1 cut(s)	177
MwoI	GCNNNNNNNGC	6 cut(s)	199, 274, 579, 659, 749, 803
NcoI	CCATGG	1 cut(s)	815
NdeI	CATATG	1 cut(s)	1339
NdeII	GATC	8 cut(s)	100, 337, 460, 838, 1007, 1021, 1068, 1168
NlaIII	CATG	7 cut(s)	94, 100, 524, 653, 688, 819, 965
NlaIV	GGNNCC	3 cut(s)	690, 1023, 1052
NmuCI	GTSAC	1 cut(s)	523
NsbI	TGCGCA	1 cut(s)	583
NsiI	ATGCAT	1 cut(s)	514
NspI	RCATGY	1 cut(s)	94
NspV	TTCGAA	1 cut(s)	14
PceI	AGGCCT	1 cut(s)	604
PciSI	GCTCTTC	3 cut(s)	11, 53, 892
PctI	GAATGC	2 cut(s)	826, 1255
PdmI	GAANNNNTTC	1 cut(s)	1192
PfeI	GAWTC	2 cut(s)	777, 1157
PkrI	GCNGC	8 cut(s)	128, 225, 276, 316, 655, 742, 799, 1303
PleI	GAGTC	1 cut(s)	973
PpsI	GAGTC	1 cut(s)	973
PshAI	GACNNNNGTC	3 cut(s)	261, 447, 624
Psp6I	CCWGG	3 cut(s)	113, 679, 703
PspFI	CCCAGC	1 cut(s)	208
PspGI	CCWGG	3 cut(s)	113, 679, 703
PspN4I	GGNNCC	3 cut(s)	690, 1023, 1052
PspPI	GGNCC	4 cut(s)	572, 674, 1239, 1331
PsrI	GAACNNNNNNTAC	2 cut(s)	226, 258
PstI	CTGCAG	1 cut(s)	641
PstNI	CAGNNNCTG	1 cut(s)	1166
PsuI	RGATCY	3 cut(s)	100, 1007, 1021
RsaI	GTAC	1 cut(s)	490
RsaNI	GTAC	1 cut(s)	489
RseI	CAYNNNNRTG	2 cut(s)	95, 1056
SapI	GCTCTTC	3 cut(s)	11, 53, 892
SaqAI	TTAA	3 cut(s)	399, 483, 720
SatI	GCNGC	8 cut(s)	127, 224, 275, 315, 654, 741, 798, 1302
Sau3AI	GATC	8 cut(s)	100, 337, 460, 838, 1007, 1021, 1068, 1168
Sau96I	GGNCC	4 cut(s)	572, 674, 1239, 1331
SchI	GAGTC	1 cut(s)	974
ScrFI	CCNGG	3 cut(s)	115, 681, 705
SduI	GDGCHC	1 cut(s)	1093
SfaNI	GCATC	6 cut(s)	127, 159, 286, 499, 852, 1072
SfcI	CTRYAG	3 cut(s)	472, 637, 1096
SfuI	TTCGAA	1 cut(s)	14
SinI	GGWCC	2 cut(s)	674, 1331
SmiMI	CAYNNNNRTG	2 cut(s)	95, 1056
SmlI	CTYRAG	3 cut(s)	609, 719, 851
SmoI	CTYRAG	3 cut(s)	609, 719, 851
SpeI	ACTAGT	1 cut(s)	527
Sse9I	AATT	6 cut(s)	22, 344, 403, 422, 989, 1132
SseBI	AGGCCT	1 cut(s)	604
SsiI	CCGC	3 cut(s)	127, 175, 1025
SspMI	CTAG	2 cut(s)	528, 600
StuI	AGGCCT	1 cut(s)	604
StyD4I	CCNGG	3 cut(s)	113, 679, 703
StyI	CCWWGG	3 cut(s)	599, 815, 1137
TaaI	ACNGT	3 cut(s)	71, 476, 1273
TaqI	TCGA	6 cut(s)	14, 75, 135, 150, 895, 1119
TasI	AATT	6 cut(s)	22, 344, 403, 422, 989, 1132
TauI	GCSGC	1 cut(s)	129
TfiI	GAWTC	2 cut(s)	777, 1157
Tru1I	TTAA	3 cut(s)	399, 483, 720
Tru9I	TTAA	3 cut(s)	399, 483, 720
TscAI	CASTG	1 cut(s)	394
TseFI	GTSAC	1 cut(s)	523
TseI	GCWGC	7 cut(s)	223, 274, 314, 653, 740, 797, 1301
Tsp45I	GTSAC	1 cut(s)	523
TspDTI	ATGAA	6 cut(s)	85, 638, 684, 998, 1002, 1074
TspGWI	ACGGA	1 cut(s)	963
TspRI	CASTG	1 cut(s)	394
Vha464I	CTTAAG	1 cut(s)	719
VpaK11BI	GGWCC	2 cut(s)	674, 1331
XagI	CCTNNNNNAGG	1 cut(s)	609
XapI	RAATTY	2 cut(s)	989, 1132
XceI	RCATGY	1 cut(s)	94
XmaJI	CCTAGG	1 cut(s)	599
XmnI	GAANNNNTTC	1 cut(s)	1192
XspI	CTAG	2 cut(s)	528, 600
Zsp2I	ATGCAT	1 cut(s)	514

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.