Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002711.1

Orthogroup ID

OG0001263

Physical Location & Seq

Genomic Coordinates Reverse (-)

70472 .. 78526

Gene Structure 8055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002711.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

atggtactcccgcttgtaaagctcggaactttgctcttaaaaactatgagcaaacctgtagccgccaggcttaaacaggcagctgggaagcaccccaggttccgccaaatcatcgtcaacatggctcaggcaaaccatcaaatcaccacgaaaatgcaaagacgcctctatagtcacgcaactgatgtcgagattcgtcccttgaatgaggagaaggctgtgcaggctgctgtggacctcatcggggagctctttgtcttcacggttgcaggagttgctttgatctttgaagttcaaagaagtgccagatcagaagccagaaaggaggaagcacgaaagcaagaactggagacaatgaagcaaagagatgaagagttatctagagaagtggagcttctaaggagcaaatatgaagaactggagaagcttgctaagggacaaggactcggtggtatttttaatttcaagcgtgttgccgatacagaaggtgcaaaccagcagagaaaagcgagccaaaagacaagtcagtcactactacttcatcatcaacactccaccaagccagaaacccatttcagcttctgggctctgtggaacttggaatcaaacactttgagaaaacggggtttaagaagtgacgagggggcgggtggcatgttcatggatctccagtttgccaggaaggagagccgcactatcgatgccaccctcctcgaagaacaagtccatcagatgctccgcgaatggaaatccgagctcaatgagccctccccagcttcttctttgcagcaaggtggtagtgttggttcgttctcttcagacatctgtcggctgttgcagctttgtgaggaggaagatgatgccagcagtccattagctgcaccaaaacctgagcctaacgatcataaattggaagtcggagagagtttggtctttcaagaggggttcagtgtgaatcataggcaacaggaacacggctttccactggctgatcagggcaaaagctcccttttaggagttcgcagtgccggtgttaacaatttggaaggggctaatcaattggactatcagcagtttgacttgcatcaagactttgatcacaactactacagttgttttaatggtacagctttgagtgcgggcgatgcattgtctcatgtcactagttatctaccaagtatatgccctccaccttcagctttcttaggcccaaagtgtgcactttgggattgtcctaggcctgctcaagggttggattggtgtcaagactactgcagtagctttcatgctgctttagcgctgaatgaaggaccacctggcatggctccagtcctacgacctgggggcattggccttaaggatggcctgctttttgctgctcttagtgcaaaggcacaaggaaaagatgttggaatccctgagtgtgagggagctgctactgcaaagtctccatggaatgcacctgaactctttgatcttttggttcttgagggagagatgcttcgggaatggctcttttttgacaagcctcgaagagcttttgagagtggtaacagaaagcagaggtcgttgccagattacaacggacgaggttggcatgagtcaaggaagcaagtgatgaatgaattcggagggctgaagagatcctattatatggatccgcaacccctgaaccattttgagtggcacctttatgagtacgagatcaacaagtgtgatgcttgtgccctctatagattggaactgaaacttgtcgatgggaagaaaaattccaaggggaaactaagtaatgattcagttgctgatctccagaagcaaatgggaaggctttctgctgagttcccctctgataacaagcgcaatgtgaagggcagggccaaagtgaatgcaaaggttggtgttggaactgtctattacactccaactcgagggacagcaacaaatgggacatttgactatggaacaggtccaccatatgattatcttgttgacaatctaagtggctattacctaacataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002376 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009631 GO:0009648 GO:0009791 GO:0009814 GO:0009816 GO:0009889 GO:0009891 GO:0009893 GO:0010035 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0042742 GO:0043207 GO:0043565 GO:0045087 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

672

Amino Acids

75.09

Weight (kDa)

6.68

Isoelectric Point (pI)

46.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001263)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28520 AT1G28520 AT1G28520 AT1G28520 AT1G28520
fragaria_vesca	FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850
malus_domestica	MD05G1308300.v1.1 MD10G1287300.v1.1 MD17G1234200.v1.1
prunus_persica	Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.4G054500_v2.0.a1 Prupe.4G054500_v2.0.a1
pyrus_communis	pycom05g28500 pycom10g24030 pycom17g23750
rosa_chinensis	RchiOBHm_Chr2g0128221 RchiOBHm_Chr5g0009511
rosa_laevigata	RLG00000018998 RLG00000031668
rosa_multiflora	Rmu_sc0000837.1_g000011 Rmu_sc0002711.1_g000012 Rmu_sc0003465.1_g000003
rosa_roxburghii	Rroxscaffold_1G00066620 Rroxscaffold_1G00067320 Rroxscaffold_2G00115480 Rroxscaffold_2G00115940
rosa_rugosa	Rorug02G0278700 Rorug04G0443800 Rorug04G0443800 Rorug04G0443900 Rorug04G0444000
rosa_samantha	Rh2AG331400 Rh2BG339600 Rh2CG317900 Rh2DG356500 Rh5AG074800 Rh5BG070600 Rh5CG083000 Rh5DG070800
rosa_wichuraiana	Rw2G026810 Rw5G006930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	526
AccB1I	GGYRCC	1 cut(s)	1686
AccII	CGCG	1 cut(s)	741
AciI	CCGC	8 cut(s)	11, 63, 103, 647, 691, 739, 1139, 1661
AclWI	GGATC	4 cut(s)	672, 1638, 1652, 1665
AcsI	RAATTY	2 cut(s)	1625, 1768
AcuI	CTGAAG	3 cut(s)	801, 1179, 1658
AcyI	GRCGYC	1 cut(s)	163
AfaI	GTAC	3 cut(s)	6, 1126, 1700
AfeI	AGCGCT	1 cut(s)	1299
AfiI	CCNNNNNNNGG	3 cut(s)	244, 1247, 1928
AflII	CTTAAG	1 cut(s)	1355
AgsI	TTSAA	5 cut(s)	205, 290, 296, 466, 938
AhlI	ACTAGT	1 cut(s)	1163
AjnI	CCWGG	5 cut(s)	65, 95, 677, 1315, 1339
Alw21I	GWGCWC	3 cut(s)	252, 759, 1222
Alw26I	GTCTC	3 cut(s)	344, 1158, 1452
Alw44I	GTGCAC	1 cut(s)	1218
AlwI	GGATC	4 cut(s)	672, 1638, 1652, 1665
AlwNI	CAGNNNCTG	2 cut(s)	582, 1802
Ama87I	CYCGRG	1 cut(s)	1926
Aor51HI	AGCGCT	1 cut(s)	1299
AoxI	GGCC	5 cut(s)	1207, 1238, 1351, 1363, 1875
ApaLI	GTGCAC	1 cut(s)	1218
ApeKI	GCWGC	8 cut(s)	80, 227, 787, 838, 878, 1289, 1376, 1433
ApoI	RAATTY	2 cut(s)	1625, 1768
ArsI	GACNNNNNNTTYG	4 cut(s)	508, 540, 708, 740
Asp700I	GAANNNNTTC	2 cut(s)	1625, 1828
AspA2I	CCTAGG	1 cut(s)	1235
AspLEI	GCGC	2 cut(s)	1300, 1860
AspS9I	GGNCC	5 cut(s)	235, 1208, 1310, 1875, 1967
AsuHPI	GGTGA	1 cut(s)	136
AvaI	CYCGRG	1 cut(s)	1926
AvaII	GGWCC	3 cut(s)	235, 1310, 1967
AvrII	CCTAGG	1 cut(s)	1235
BaeGI	GKGCMC	2 cut(s)	1222, 1729
BamHI	GGATCC	1 cut(s)	1657
BanI	GGYRCC	1 cut(s)	1686
BanII	GRGCYC	4 cut(s)	252, 589, 759, 768
BbsI	GAAGAC	1 cut(s)	250
Bbv12I	GWGCWC	3 cut(s)	252, 759, 1222
BbvI	GCAGC	8 cut(s)	92, 214, 799, 850, 865, 1276, 1363, 1420
BccI	CCATC	4 cut(s)	144, 735, 1355, 1751
BceAI	ACGGC	1 cut(s)	991
BciT130I	CCWGG	5 cut(s)	67, 97, 679, 1317, 1341
BclI	TGATCA	2 cut(s)	991, 1096
BcoDI	GTCTC	3 cut(s)	344, 1158, 1452
BcuI	ACTAGT	1 cut(s)	1163
BfaI	CTAG	3 cut(s)	381, 1164, 1236
BfmI	CTRYAG	5 cut(s)	57, 169, 1108, 1273, 1732
BfoI	RGCGCY	1 cut(s)	1301
BfrI	CTTAAG	1 cut(s)	1355
BlnI	CCTAGG	1 cut(s)	1235
Bme1390I	CCNGG	5 cut(s)	67, 97, 679, 1317, 1341
Bme18I	GGWCC	3 cut(s)	235, 1310, 1967
BmeT110I	CYCGRG	1 cut(s)	1926
BmgT120I	GGNCC	5 cut(s)	235, 1208, 1310, 1875, 1967
BmiI	GGNNCC	4 cut(s)	101, 1326, 1659, 1688
BmrFI	CCNGG	5 cut(s)	67, 97, 679, 1317, 1341
BmsI	GCATC	7 cut(s)	691, 723, 850, 1093, 1135, 1488, 1708
BoxI	GACNNNNGTC	1 cut(s)	825
BpiI	GAAGAC	1 cut(s)	250
BplI	GAGNNNNNCTC	2 cut(s)	1829, 1861
BpmI	CTGGAG	5 cut(s)	368, 440, 653, 1311, 1793
Bpu10I	CCTNAGC	3 cut(s)	126, 432, 891
BpuEI	CTTGAG	2 cut(s)	1230, 1508
Bsa29I	ATCGAT	1 cut(s)	699
BsaHI	GRCGYC	1 cut(s)	163
BsaJI	CCNNGG	5 cut(s)	95, 1235, 1340, 1451, 1773
Bsc4I	CCNNNNNNNGG	3 cut(s)	244, 1247, 1928
Bse118I	RCCGGY	1 cut(s)	1028
Bse1I	ACTGG	5 cut(s)	351, 423, 670, 990, 1328
Bse3DI	GCAATG	1 cut(s)	1867
BseBI	CCWGG	5 cut(s)	67, 97, 679, 1317, 1341
BseCI	ATCGAT	1 cut(s)	699
BseDI	CCNNGG	5 cut(s)	95, 1235, 1340, 1451, 1773
BseGI	GGATG	1 cut(s)	1366
BseLI	CCNNNNNNNGG	3 cut(s)	244, 1247, 1928
BseMI	GCAATG	1 cut(s)	1867
BseMII	CTCAG	4 cut(s)	140, 882, 1410, 1827
BseNI	ACTGG	5 cut(s)	351, 423, 670, 990, 1328
BseRI	GAGGAG	3 cut(s)	224, 701, 863
BseSI	GKGCMC	2 cut(s)	1222, 1729
BseXI	GCAGC	8 cut(s)	92, 214, 799, 850, 865, 1276, 1363, 1420
BseYI	CCCAGC	2 cut(s)	83, 772
BsgI	GTGCAG	2 cut(s)	242, 864
Bsh1236I	CGCG	1 cut(s)	741
BshFI	GGCC	5 cut(s)	1209, 1240, 1353, 1365, 1877
BshNI	GGYRCC	1 cut(s)	1686
BshVI	ATCGAT	1 cut(s)	699
BsiHKAI	GWGCWC	3 cut(s)	252, 759, 1222
BsiHKCI	CYCGRG	1 cut(s)	1926
BsiSI	CCGG	1 cut(s)	1029
BslFI	GGGAC	4 cut(s)	183, 450, 1945, 1960
BslI	CCNNNNNNNGG	3 cut(s)	244, 1247, 1928
BsmAI	GTCTC	3 cut(s)	344, 1158, 1452
BsmFI	GGGAC	4 cut(s)	183, 450, 1945, 1960
BsmI	GAATGC	2 cut(s)	1462, 1891
BsnI	GGCC	5 cut(s)	1209, 1240, 1353, 1365, 1877
BsoBI	CYCGRG	1 cut(s)	1926
Bsp1286I	GDGCHC	6 cut(s)	252, 589, 759, 768, 1222, 1729
Bsp19I	CCATGG	1 cut(s)	1451
BspACI	CCGC	8 cut(s)	11, 63, 103, 647, 691, 739, 1139, 1661
BspANI	GGCC	5 cut(s)	1209, 1240, 1353, 1365, 1877
BspCNI	CTCAG	4 cut(s)	139, 883, 1411, 1828
BspDI	ATCGAT	1 cut(s)	699
BspFNI	CGCG	1 cut(s)	741
BspLI	GGNNCC	4 cut(s)	101, 1326, 1659, 1688
BspMAI	CTGCAG	1 cut(s)	1277
BspPI	GGATC	4 cut(s)	672, 1638, 1652, 1665
BspQI	GCTCTTC	1 cut(s)	1528
BspT107I	GGYRCC	1 cut(s)	1686
BspTI	CTTAAG	1 cut(s)	1355
BsrDI	GCAATG	1 cut(s)	1867
BsrFI	RCCGGY	1 cut(s)	1028
BsrI	ACTGG	5 cut(s)	351, 423, 670, 990, 1328
BssAI	RCCGGY	1 cut(s)	1028
BssECI	CCNNGG	5 cut(s)	95, 1235, 1340, 1451, 1773
BssNI	GRCGYC	1 cut(s)	163
BssT1I	CCWWGG	3 cut(s)	1235, 1451, 1773
Bst2UI	CCWGG	5 cut(s)	67, 97, 679, 1317, 1341
Bst4CI	ACNGT	3 cut(s)	265, 1112, 1909
Bst6I	CTCTTC	4 cut(s)	366, 820, 1528, 1634
BstACI	GRCGYC	1 cut(s)	163
BstAFI	CTTAAG	1 cut(s)	1355
BstAPI	GCANNNNNTGC	1 cut(s)	275
BstC8I	GCNNGC	7 cut(s)	225, 429, 511, 865, 1141, 1242, 1367
BstDSI	CCRYGG	1 cut(s)	1451
BstENI	CCTNNNNNAGG	1 cut(s)	1245
BstF5I	GGATG	1 cut(s)	1366
BstFNI	CGCG	1 cut(s)	741
BstH2I	RGCGCY	1 cut(s)	1301
BstHHI	GCGC	2 cut(s)	1300, 1860
BstMAI	GTCTC	3 cut(s)	344, 1158, 1452
BstNI	CCWGG	5 cut(s)	67, 97, 679, 1317, 1341
BstNSI	RCATGY	1 cut(s)	658
BstPAI	GACNNNNGTC	1 cut(s)	825
BstSCI	CCNGG	5 cut(s)	65, 95, 677, 1315, 1339
BstSFI	CTRYAG	5 cut(s)	57, 169, 1108, 1273, 1732
BstSLI	GKGCMC	2 cut(s)	1222, 1729
BstUI	CGCG	1 cut(s)	741
BstV1I	GCAGC	8 cut(s)	92, 214, 799, 850, 865, 1276, 1363, 1420
BstV2I	GAAGAC	1 cut(s)	250
BstX2I	RGATCY	3 cut(s)	664, 1643, 1657
BstYI	RGATCY	3 cut(s)	664, 1643, 1657
Bsu15I	ATCGAT	1 cut(s)	699
BsuRI	GGCC	5 cut(s)	1209, 1240, 1353, 1365, 1877
BsuTUI	ATCGAT	1 cut(s)	699
BtgI	CCRYGG	1 cut(s)	1451
BtgZI	GCGATG	1 cut(s)	1158
BtsCI	GGATG	1 cut(s)	1366
BtsI	GCAGTG	1 cut(s)	1030
BtsIMutI	CAGTG	3 cut(s)	955, 983, 1030
Cac8I	GCNNGC	7 cut(s)	225, 429, 511, 865, 1141, 1242, 1367
CaiI	CAGNNNCTG	2 cut(s)	582, 1802
CfoI	GCGC	2 cut(s)	1300, 1860
Cfr10I	RCCGGY	1 cut(s)	1028
Cfr13I	GGNCC	5 cut(s)	235, 1208, 1310, 1875, 1967
ClaI	ATCGAT	1 cut(s)	699
CseI	GACGC	1 cut(s)	171
Csp6I	GTAC	3 cut(s)	5, 1125, 1699
CspCI	CAANNNNNGTGG	2 cut(s)	1981, 2016
CviAII	CATG	8 cut(s)	121, 655, 661, 1157, 1286, 1321, 1452, 1598
CviQI	GTAC	3 cut(s)	5, 1125, 1699
DrdI	GACNNNNNNGTC	1 cut(s)	526
DseDI	GACNNNNNNGTC	1 cut(s)	526
Eam1104I	CTCTTC	4 cut(s)	366, 820, 1528, 1634
EarI	CTCTTC	4 cut(s)	366, 820, 1528, 1634
EciI	GGCGGA	1 cut(s)	92
Ecl136II	GAGCTC	2 cut(s)	250, 757
Eco130I	CCWWGG	3 cut(s)	1235, 1451, 1773
Eco147I	AGGCCT	1 cut(s)	1240
Eco24I	GRGCYC	4 cut(s)	252, 589, 759, 768
Eco47I	GGWCC	3 cut(s)	235, 1310, 1967
Eco47III	AGCGCT	1 cut(s)	1299
Eco53kI	GAGCTC	2 cut(s)	250, 757
Eco57I	CTGAAG	3 cut(s)	801, 1179, 1658
Eco88I	CYCGRG	1 cut(s)	1926
EcoICRI	GAGCTC	2 cut(s)	250, 757
EcoNI	CCTNNNNNAGG	1 cut(s)	1245
EcoRI	GAATTC	1 cut(s)	1625
EcoRII	CCWGG	5 cut(s)	65, 95, 677, 1315, 1339
EcoT14I	CCWWGG	3 cut(s)	1235, 1451, 1773
EcoT22I	ATGCAT	1 cut(s)	1150
EcoT38I	GRGCYC	4 cut(s)	252, 589, 759, 768
ErhI	CCWWGG	3 cut(s)	1235, 1451, 1773
FaeI	CATG	8 cut(s)	124, 658, 664, 1160, 1289, 1324, 1455, 1601
FalI	AAGNNNNNCTT	2 cut(s)	378, 410
FaqI	GGGAC	4 cut(s)	183, 450, 1945, 1960
FatI	CATG	8 cut(s)	120, 654, 660, 1156, 1285, 1320, 1451, 1597
FauI	CCCGC	3 cut(s)	18, 640, 1132
FauNDI	CATATG	1 cut(s)	1975
FbaI	TGATCA	2 cut(s)	991, 1096
FokI	GGATG	1 cut(s)	1373
FriOI	GRGCYC	4 cut(s)	252, 589, 759, 768
FspBI	CTAG	3 cut(s)	381, 1164, 1236
GlaI	GCGC	2 cut(s)	1299, 1859
GsaI	CCCAGC	2 cut(s)	87, 776
GsuI	CTGGAG	5 cut(s)	368, 440, 653, 1311, 1793
HaeII	RGCGCY	1 cut(s)	1301
HaeIII	GGCC	5 cut(s)	1209, 1240, 1353, 1365, 1877
HapII	CCGG	1 cut(s)	1029
HgaI	GACGC	1 cut(s)	171
HhaI	GCGC	2 cut(s)	1300, 1860
Hin1I	GRCGYC	1 cut(s)	163
Hin1II	CATG	8 cut(s)	124, 658, 664, 1160, 1289, 1324, 1455, 1601
Hin6I	GCGC	2 cut(s)	1298, 1858
HinP1I	GCGC	2 cut(s)	1298, 1858
HincII	GTYRAC	3 cut(s)	118, 1036, 1990
HindII	GTYRAC	3 cut(s)	118, 1036, 1990
HindIII	AAGCTT	1 cut(s)	425
HinfI	GANTC	7 cut(s)	193, 444, 602, 955, 1413, 1601, 1793
HpaI	GTTAAC	1 cut(s)	1036
HpaII	CCGG	1 cut(s)	1029
HphI	GGTGA	1 cut(s)	136
Hpy166II	GTNNAC	6 cut(s)	118, 235, 1036, 1220, 1970, 1990
Hpy188I	TCNGA	8 cut(s)	26, 313, 732, 754, 820, 920, 1631, 1849
Hpy188III	TCNNGA	8 cut(s)	190, 381, 938, 1088, 1265, 1487, 1505, 1810
Hpy8I	GTNNAC	6 cut(s)	118, 235, 1036, 1220, 1970, 1990
HpyAV	CCTTC	8 cut(s)	208, 479, 676, 1040, 1203, 1301, 1818, 1861
HpyCH4III	ACNGT	3 cut(s)	265, 1112, 1909
Hsp92I	GRCGYC	1 cut(s)	163
Hsp92II	CATG	8 cut(s)	124, 658, 664, 1160, 1289, 1324, 1455, 1601
HspAI	GCGC	2 cut(s)	1298, 1858
Ksp22I	TGATCA	2 cut(s)	991, 1096
KspAI	GTTAAC	1 cut(s)	1036
LguI	GCTCTTC	1 cut(s)	1528
LmnI	GCTCC	7 cut(s)	247, 391, 402, 741, 1010, 1330, 1430
Lsp1109I	GCAGC	8 cut(s)	92, 214, 799, 850, 865, 1276, 1363, 1420
LweI	GCATC	7 cut(s)	691, 723, 850, 1093, 1135, 1488, 1708
MaeI	CTAG	3 cut(s)	381, 1164, 1236
MaeIII	GTNAC	5 cut(s)	173, 528, 635, 1159, 1550
MfeI	CAATTG	1 cut(s)	1058
MflI	RGATCY	3 cut(s)	664, 1643, 1657
MhlI	GDGCHC	6 cut(s)	252, 589, 759, 768, 1222, 1729
MluCI	AATT	6 cut(s)	460, 908, 1039, 1058, 1625, 1768
MlyI	GAGTC	2 cut(s)	438, 1610
MmeI	TCCRAC	5 cut(s)	898, 1233, 1390, 1882, 1946
Mph1103I	ATGCAT	1 cut(s)	1150
MroXI	GAANNNNTTC	2 cut(s)	1625, 1828
MseI	TTAA	7 cut(s)	38, 72, 459, 629, 1035, 1119, 1356
MslI	CAYNNNNRTG	3 cut(s)	152, 659, 1692
MspA1I	CMGCKG	1 cut(s)	83
MspCI	CTTAAG	1 cut(s)	1355
MspI	CCGG	1 cut(s)	1029
MspR9I	CCNGG	5 cut(s)	67, 97, 679, 1317, 1341
MunI	CAATTG	1 cut(s)	1058
Mva1269I	GAATGC	2 cut(s)	1462, 1891
MvaI	CCWGG	5 cut(s)	67, 97, 679, 1317, 1341
MvnI	CGCG	1 cut(s)	741
NcoI	CCATGG	1 cut(s)	1451
NdeI	CATATG	1 cut(s)	1975
NlaIII	CATG	8 cut(s)	124, 658, 664, 1160, 1289, 1324, 1455, 1601
NlaIV	GGNNCC	4 cut(s)	101, 1326, 1659, 1688
NmuCI	GTSAC	4 cut(s)	173, 528, 635, 1159
NsiI	ATGCAT	1 cut(s)	1150
NspI	RCATGY	1 cut(s)	658
PaeR7I	CTCGAG	1 cut(s)	1926
PceI	AGGCCT	1 cut(s)	1240
PciSI	GCTCTTC	1 cut(s)	1528
PctI	GAATGC	2 cut(s)	1462, 1891
PdmI	GAANNNNTTC	2 cut(s)	1625, 1828
PfeI	GAWTC	5 cut(s)	193, 602, 955, 1413, 1793
PleI	GAGTC	2 cut(s)	438, 1609
PpsI	GAGTC	2 cut(s)	438, 1609
PshAI	GACNNNNGTC	1 cut(s)	825
Psp124BI	GAGCTC	2 cut(s)	252, 759
Psp6I	CCWGG	5 cut(s)	65, 95, 677, 1315, 1339
PspFI	CCCAGC	2 cut(s)	83, 772
PspGI	CCWGG	5 cut(s)	65, 95, 677, 1315, 1339
PspN4I	GGNNCC	4 cut(s)	101, 1326, 1659, 1688
PspPI	GGNCC	5 cut(s)	235, 1208, 1310, 1875, 1967
PspXI	VCTCGAGB	1 cut(s)	1926
PsrI	GAACNNNNNNTAC	2 cut(s)	790, 822
PstI	CTGCAG	1 cut(s)	1277
PstNI	CAGNNNCTG	2 cut(s)	582, 1802
PsuI	RGATCY	3 cut(s)	664, 1643, 1657
PvuII	CAGCTG	1 cut(s)	83
RsaI	GTAC	3 cut(s)	6, 1126, 1700
RsaNI	GTAC	3 cut(s)	5, 1125, 1699
RseI	CAYNNNNRTG	3 cut(s)	152, 659, 1692
SacI	GAGCTC	2 cut(s)	252, 759
SapI	GCTCTTC	1 cut(s)	1528
SaqAI	TTAA	7 cut(s)	38, 72, 459, 629, 1035, 1119, 1356
Sau96I	GGNCC	5 cut(s)	235, 1208, 1310, 1875, 1967
SchI	GAGTC	2 cut(s)	438, 1610
ScrFI	CCNGG	5 cut(s)	67, 97, 679, 1317, 1341
SduI	GDGCHC	6 cut(s)	252, 589, 759, 768, 1222, 1729
SfaNI	GCATC	7 cut(s)	691, 723, 850, 1093, 1135, 1488, 1708
SfcI	CTRYAG	5 cut(s)	57, 169, 1108, 1273, 1732
Sfr274I	CTCGAG	1 cut(s)	1926
SinI	GGWCC	3 cut(s)	235, 1310, 1967
SlaI	CTCGAG	1 cut(s)	1926
SmiMI	CAYNNNNRTG	3 cut(s)	152, 659, 1692
SmlI	CTYRAG	4 cut(s)	1245, 1355, 1487, 1926
SmoI	CTYRAG	4 cut(s)	1245, 1355, 1487, 1926
SpeI	ACTAGT	1 cut(s)	1163
Sse9I	AATT	6 cut(s)	460, 908, 1039, 1058, 1625, 1768
SseBI	AGGCCT	1 cut(s)	1240
SsiI	CCGC	8 cut(s)	11, 63, 103, 647, 691, 739, 1139, 1661
SspMI	CTAG	3 cut(s)	381, 1164, 1236
SstI	GAGCTC	2 cut(s)	252, 759
StuI	AGGCCT	1 cut(s)	1240
StyD4I	CCNGG	5 cut(s)	65, 95, 677, 1315, 1339
StyI	CCWWGG	3 cut(s)	1235, 1451, 1773
TaaI	ACNGT	3 cut(s)	265, 1112, 1909
TaqI	TCGA	6 cut(s)	189, 699, 714, 1531, 1755, 1927
TasI	AATT	6 cut(s)	460, 908, 1039, 1058, 1625, 1768
TauI	GCSGC	2 cut(s)	65, 693
TfiI	GAWTC	5 cut(s)	193, 602, 955, 1413, 1793
Tru1I	TTAA	7 cut(s)	38, 72, 459, 629, 1035, 1119, 1356
Tru9I	TTAA	7 cut(s)	38, 72, 459, 629, 1035, 1119, 1356
TscAI	CASTG	3 cut(s)	955, 990, 1030
TseFI	GTSAC	4 cut(s)	173, 528, 635, 1159
TseI	GCWGC	8 cut(s)	80, 227, 787, 838, 878, 1289, 1376, 1433
Tsp45I	GTSAC	4 cut(s)	173, 528, 635, 1159
TspDTI	ATGAA	9 cut(s)	371, 384, 426, 530, 649, 1274, 1320, 1634, 1638
TspGWI	ACGGA	1 cut(s)	1599
TspRI	CASTG	3 cut(s)	955, 990, 1030
Vha464I	CTTAAG	1 cut(s)	1355
VneI	GTGCAC	1 cut(s)	1218
VpaK11BI	GGWCC	3 cut(s)	235, 1310, 1967
XagI	CCTNNNNNAGG	1 cut(s)	1245
XapI	RAATTY	2 cut(s)	1625, 1768
XbaI	TCTAGA	1 cut(s)	380
XceI	RCATGY	1 cut(s)	658
XhoI	CTCGAG	1 cut(s)	1926
XmaJI	CCTAGG	1 cut(s)	1235
XmnI	GAANNNNTTC	2 cut(s)	1625, 1828
XspI	CTAG	3 cut(s)	381, 1164, 1236
Zsp2I	ATGCAT	1 cut(s)	1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.