Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0001263

Physical Location & Seq

Genomic Coordinates Reverse (-)

25949983 .. 25951938

Gene Structure 1956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g24030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGAAGGGTTCAAAGAGCAATTGCAAGTCCGCTTCTCACAAGCTTTTTAAGGACAAAGCAAAGAACCGCGTTGATGACTTGCAGGGCATGTTCATGGACCTCCAGTTTGCCAGAAAGGAGAGCCGCTCCATCGATGCTGCACTTCTTGAAGAACAAGTGCATCAGATGCTACGCGAGTGGAAAGCCGAGCTAAATGAGCCCTCCCCGGCTTCTTCTTTGCAGCAGCAGGGTGGCAGTCTTGGTTCGTTCTCTTCAGACATTTGCCGGCTGTTGCAGCTATGTGAAGAGGAAGATGATGCCACTAGTCCATTAGCTGCACCGAAACCTGAGCCAAATGATCAAAACGTGCAAGTTGGAGGAAGTTCGGTCTTTCATGAGGGATTTAGTGTGAATCAAGGGCAACAGGAACATGCCATCCCGTTGGCTGATCAGTGCAAAAGCTCCCCTTCAGGAGTTCGCAATGTTGCTGTTAACAATTTGGAAGGGGCTAATCAATTGGACTATCATCAGTTTGAATTGCATCAAGACTTCGAGCAGAGTTTCTATCCTTGTTTTAGTGGCACAGCTTTGAGTGGGGAGGACACGTTGCCTCAGGTTTCTACTTATCTACCGAGTATTTTTCCTCCACCATCTGCTTTCTTGGGCCCAAAGTGTGCACTTTGGGATTGCCCTAGGCCTGCTCAAGGGATGGACTGGTGGCTAGACTACTGCAGTAGCTTTCATGCTGCTTTGGCATTGAATGAAGGACCACCAGGCGTGGGTCCGGTCCTTAGACCTGGGGGCATAGGCCTGAAGGACGGCCTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAAGTGTTGGTATCCCTGAGTGCGAGGGAGCGGCTACTGCGAAGTCTCCATGGAATGCACGTGAACTCTTTGATCTTTCGGTTCTTGAGGGTGAGGTAATCAGGGAGTGGCTCTTTTTCGATAAGCCTCGAAGAGCTTTTGAGAGCGGTAACAGAAAACAGAGGTCATTGCCAGATTACAACGGACGAGGTTGGCACGAGTCAAGGAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGGTCTTACTATATGGATCCTCAACCATTGAACCATTTTGAGTGGCACCTTTACGAGTACGAGATCAACAAGTGTGATGTTTGTGCCTTGTATAGATTGGAGCTGAAACTTGTTGATGGGAAGAAAAATTCCAAGGGCAAACTAACCAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTTTCTGCCGAGTTCCCCACCGATAACAAGCGCACTGTCAAGGGCAGGGCCAAGATTAACGCAAGGGTTGGTGTCGGAAATGTCTACTACTCTCCAAATCGAGGGGCAATCACAAATGCGACTTTTGACTACGGATCAGGTGCACCGTACGACTACCTTCTTGACGACGTCAACGGCTATTACCTAACCAAACCAAAGAACTTTGATGGGCTGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002376 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009631 GO:0009648 GO:0009791 GO:0009814 GO:0009816 GO:0009889 GO:0009891 GO:0009893 GO:0010035 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0042742 GO:0043207 GO:0043565 GO:0045087 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

494

Amino Acids

54.76

Weight (kDa)

5.79

Isoelectric Point (pI)

43.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001263)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28520 AT1G28520 AT1G28520 AT1G28520 AT1G28520
fragaria_vesca	FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_3g08390 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850 FvH4_6g26850
malus_domestica	MD05G1308300.v1.1 MD10G1287300.v1.1 MD17G1234200.v1.1
prunus_persica	Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.3G127200_v2.0.a1 Prupe.4G054500_v2.0.a1 Prupe.4G054500_v2.0.a1
pyrus_communis	pycom05g28500 pycom10g24030 pycom17g23750
rosa_chinensis	RchiOBHm_Chr2g0128221 RchiOBHm_Chr5g0009511
rosa_laevigata	RLG00000018998 RLG00000031668
rosa_multiflora	Rmu_sc0000837.1_g000011 Rmu_sc0002711.1_g000012 Rmu_sc0003465.1_g000003
rosa_roxburghii	Rroxscaffold_1G00066620 Rroxscaffold_1G00067320 Rroxscaffold_2G00115480 Rroxscaffold_2G00115940
rosa_rugosa	Rorug02G0278700 Rorug04G0443800 Rorug04G0443800 Rorug04G0443900 Rorug04G0444000
rosa_samantha	Rh2AG331400 Rh2BG339600 Rh2CG317900 Rh2DG356500 Rh5AG074800 Rh5BG070600 Rh5CG083000 Rh5DG070800
rosa_wichuraiana	Rw2G026810 Rw5G006930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1434
AccB1I	GGYRCC	1 cut(s)	1122
AccBSI	CCGCTC	3 cut(s)	126, 869, 984
AccI	GTMKAC	1 cut(s)	1347
AccII	CGCG	2 cut(s)	69, 174
AciI	CCGC	5 cut(s)	30, 67, 124, 869, 984
AclWI	GGATC	3 cut(s)	1088, 1101, 1405
AcsI	RAATTY	1 cut(s)	1204
AcuI	CTGAAG	4 cut(s)	237, 432, 812, 1094
AcvI	CACGTG	1 cut(s)	899
AcyI	GRCGYC	1 cut(s)	1431
AfaI	GTAC	2 cut(s)	1136, 1412
AfiI	CCNNNNNNNGG	3 cut(s)	683, 758, 1364
AflIII	ACRYGT	1 cut(s)	582
AgsI	TTSAA	5 cut(s)	12, 149, 515, 739, 1108
AhlI	ACTAGT	1 cut(s)	302
AjnI	CCWGG	2 cut(s)	751, 775
AloI	GAACNNNNNNTCC	2 cut(s)	399, 431
AluBI	AGCT	9 cut(s)	43, 190, 277, 314, 441, 566, 717, 974, 1180
AluI	AGCT	9 cut(s)	43, 190, 277, 314, 441, 566, 717, 974, 1180
Alw21I	GWGCWC	2 cut(s)	658, 1408
Alw26I	GTCTC	1 cut(s)	888
Alw44I	GTGCAC	2 cut(s)	654, 1404
AlwI	GGATC	3 cut(s)	1088, 1101, 1405
AlwNI	CAGNNNCTG	1 cut(s)	1238
AoxI	GGCC	5 cut(s)	643, 674, 787, 799, 1311
ApaI	GGGCCC	1 cut(s)	647
ApaLI	GTGCAC	2 cut(s)	654, 1404
ApeKI	GCWGC	7 cut(s)	137, 220, 223, 274, 314, 725, 812
ApoI	RAATTY	1 cut(s)	1204
ArsI	GACNNNNNNTTYG	2 cut(s)	89, 121
Asp700I	GAANNNNTTC	1 cut(s)	1264
AspA2I	CCTAGG	1 cut(s)	671
AspLEI	GCGC	1 cut(s)	1296
AspS9I	GGNCC	7 cut(s)	97, 643, 644, 746, 761, 766, 1311
AsuC2I	CCSGG	1 cut(s)	206
AsuHPI	GGTGA	1 cut(s)	941
AvaII	GGWCC	4 cut(s)	97, 746, 761, 766
AvrII	CCTAGG	1 cut(s)	671
AxyI	CCTNAGG	1 cut(s)	591
BaeGI	GKGCMC	3 cut(s)	647, 658, 1408
BamHI	GGATCC	1 cut(s)	1093
BanI	GGYRCC	1 cut(s)	1122
BanII	GRGCYC	2 cut(s)	201, 647
BarI	GAAGNNNNNNTAC	2 cut(s)	1067, 1099
BauI	CACGAG	1 cut(s)	1034
BbrPI	CACGTG	1 cut(s)	899
Bbv12I	GWGCWC	2 cut(s)	658, 1408
BbvI	GCAGC	7 cut(s)	124, 232, 235, 286, 301, 712, 799
BccI	CCATC	7 cut(s)	137, 422, 637, 682, 1187, 1249, 1463
BceAI	ACGGC	2 cut(s)	814, 1453
BciT130I	CCWGG	2 cut(s)	753, 777
BciVI	GTATCC	1 cut(s)	860
BclI	TGATCA	2 cut(s)	337, 427
BcnI	CCSGG	1 cut(s)	206
BcoDI	GTCTC	1 cut(s)	888
BcuI	ACTAGT	1 cut(s)	302
BfaI	CTAG	3 cut(s)	303, 672, 701
BfmI	CTRYAG	2 cut(s)	709, 1244
BfuI	GTATCC	1 cut(s)	860
BisI	GCNGC	9 cut(s)	124, 138, 221, 224, 275, 315, 726, 813, 870
BlnI	CCTAGG	1 cut(s)	671
BlsI	GCNGC	9 cut(s)	125, 139, 222, 225, 276, 316, 727, 814, 871
Bme1390I	CCNGG	3 cut(s)	206, 753, 777
Bme18I	GGWCC	4 cut(s)	97, 746, 761, 766
BmgT120I	GGNCC	7 cut(s)	97, 643, 644, 746, 761, 766, 1311
BmiI	GGNNCC	4 cut(s)	645, 762, 1095, 1124
BmrFI	CCNGG	3 cut(s)	206, 753, 777
BmsI	GCATC	5 cut(s)	124, 156, 169, 286, 529
BplI	GAGNNNNNCTC	2 cut(s)	110, 142
BpmI	CTGGAG	1 cut(s)	86
Bpu10I	CCTNAGC	1 cut(s)	327
BpuEI	CTTGAG	2 cut(s)	666, 944
BpuMI	CCSGG	1 cut(s)	206
Bsa29I	ATCGAT	1 cut(s)	132
BsaAI	YACGTR	1 cut(s)	899
BsaHI	GRCGYC	1 cut(s)	1431
BsaJI	CCNNGG	5 cut(s)	204, 671, 776, 887, 1209
BsaWI	WCCGGW	1 cut(s)	763
BsaXI	ACNNNNNCTCC	2 cut(s)	569, 599
Bsc4I	CCNNNNNNNGG	3 cut(s)	683, 758, 1364
Bse118I	RCCGGY	1 cut(s)	264
Bse1I	ACTGG	2 cut(s)	103, 698
Bse21I	CCTNAGG	1 cut(s)	591
Bse3DI	GCAATG	2 cut(s)	466, 1004
BseBI	CCWGG	2 cut(s)	753, 777
BseCI	ATCGAT	1 cut(s)	132
BseDI	CCNNGG	5 cut(s)	204, 671, 776, 887, 1209
BseGI	GGATG	2 cut(s)	414, 693
BseLI	CCNNNNNNNGG	3 cut(s)	683, 758, 1364
BseMI	GCAATG	2 cut(s)	466, 1004
BseMII	CTCAG	3 cut(s)	318, 605, 846
BseNI	ACTGG	2 cut(s)	103, 698
BseSI	GKGCMC	3 cut(s)	647, 658, 1408
BseXI	GCAGC	7 cut(s)	124, 232, 235, 286, 301, 712, 799
BsgI	GTGCAG	2 cut(s)	123, 300
Bsh1236I	CGCG	2 cut(s)	69, 174
BshFI	GGCC	5 cut(s)	645, 676, 789, 801, 1313
BshNI	GGYRCC	1 cut(s)	1122
BshVI	ATCGAT	1 cut(s)	132
BsiHKAI	GWGCWC	2 cut(s)	658, 1408
BsiSI	CCGG	3 cut(s)	206, 265, 764
BsiWI	CGTACG	1 cut(s)	1410
BslI	CCNNNNNNNGG	3 cut(s)	683, 758, 1364
BsmAI	GTCTC	1 cut(s)	888
BsmI	GAATGC	1 cut(s)	898
BsnI	GGCC	5 cut(s)	645, 676, 789, 801, 1313
Bsp120I	GGGCCC	1 cut(s)	643
Bsp1286I	GDGCHC	4 cut(s)	201, 647, 658, 1408
Bsp143I	GATC	7 cut(s)	337, 427, 910, 1093, 1140, 1240, 1397
Bsp19I	CCATGG	1 cut(s)	887
BspACI	CCGC	5 cut(s)	30, 67, 124, 869, 984
BspANI	GGCC	5 cut(s)	645, 676, 789, 801, 1313
BspCNI	CTCAG	3 cut(s)	319, 604, 847
BspDI	ATCGAT	1 cut(s)	132
BspFNI	CGCG	2 cut(s)	69, 174
BspHI	TCATGA	1 cut(s)	373
BspLI	GGNNCC	4 cut(s)	645, 762, 1095, 1124
BspMAI	CTGCAG	2 cut(s)	713, 1248
BspPI	GGATC	3 cut(s)	1088, 1101, 1405
BspQI	GCTCTTC	1 cut(s)	964
BspT107I	GGYRCC	1 cut(s)	1122
BsrBI	CCGCTC	3 cut(s)	126, 869, 984
BsrDI	GCAATG	2 cut(s)	466, 1004
BsrFI	RCCGGY	1 cut(s)	264
BsrI	ACTGG	2 cut(s)	103, 698
BssAI	RCCGGY	1 cut(s)	264
BssECI	CCNNGG	5 cut(s)	204, 671, 776, 887, 1209
BssMI	GATC	7 cut(s)	337, 427, 910, 1093, 1140, 1240, 1397
BssNI	GRCGYC	1 cut(s)	1431
BssSI	CACGAG	1 cut(s)	1034
BssT1I	CCWWGG	3 cut(s)	671, 887, 1209
Bst2BI	CACGAG	1 cut(s)	1034
Bst2UI	CCWGG	2 cut(s)	753, 777
Bst4CI	ACNGT	2 cut(s)	1300, 1410
Bst6I	CTCTTC	4 cut(s)	256, 279, 964, 1070
BstACI	GRCGYC	1 cut(s)	1431
BstAPI	GCANNNNNTGC	1 cut(s)	166
BstBAI	YACGTR	1 cut(s)	899
BstC8I	GCNNGC	2 cut(s)	266, 678
BstDEI	CTNAG	5 cut(s)	327, 591, 770, 818, 855
BstDSI	CCRYGG	1 cut(s)	887
BstENI	CCTNNNNNAGG	1 cut(s)	681
BstF5I	GGATG	2 cut(s)	414, 693
BstFNI	CGCG	2 cut(s)	69, 174
BstHHI	GCGC	1 cut(s)	1296
BstKTI	GATC	7 cut(s)	340, 430, 913, 1096, 1143, 1243, 1400
BstMAI	GTCTC	1 cut(s)	888
BstMBI	GATC	7 cut(s)	337, 427, 910, 1093, 1140, 1240, 1397
BstMWI	GCNNNNNNNGC	6 cut(s)	166, 196, 274, 731, 821, 875
BstNI	CCWGG	2 cut(s)	753, 777
BstNSI	RCATGY	2 cut(s)	91, 413
BstSCI	CCNGG	3 cut(s)	204, 751, 775
BstSFI	CTRYAG	2 cut(s)	709, 1244
BstSLI	GKGCMC	3 cut(s)	647, 658, 1408
BstUI	CGCG	2 cut(s)	69, 174
BstV1I	GCAGC	7 cut(s)	124, 232, 235, 286, 301, 712, 799
BstX2I	RGATCY	1 cut(s)	1093
BstXI	CCANNNNNNTGG	1 cut(s)	421
BstYI	RGATCY	1 cut(s)	1093
Bsu15I	ATCGAT	1 cut(s)	132
Bsu36I	CCTNAGG	1 cut(s)	591
BsuI	GTATCC	1 cut(s)	860
BsuRI	GGCC	5 cut(s)	645, 676, 789, 801, 1313
BsuTUI	ATCGAT	1 cut(s)	132
BtgI	CCRYGG	1 cut(s)	887
BtsCI	GGATG	2 cut(s)	414, 693
BtsIMutI	CAGTG	2 cut(s)	437, 1296
Cac8I	GCNNGC	2 cut(s)	266, 678
CaiI	CAGNNNCTG	1 cut(s)	1238
CciI	TCATGA	1 cut(s)	373
CfoI	GCGC	1 cut(s)	1296
Cfr10I	RCCGGY	1 cut(s)	264
Cfr13I	GGNCC	7 cut(s)	97, 643, 644, 746, 761, 766, 1311
ClaI	ATCGAT	1 cut(s)	132
Csp6I	GTAC	2 cut(s)	1135, 1411
CviAII	CATG	6 cut(s)	88, 94, 374, 410, 722, 888
CviQI	GTAC	2 cut(s)	1135, 1411
DdeI	CTNAG	5 cut(s)	327, 591, 770, 818, 855
DpnI	GATC	7 cut(s)	339, 429, 912, 1095, 1142, 1242, 1399
DpnII	GATC	7 cut(s)	337, 427, 910, 1093, 1140, 1240, 1397
Eam1104I	CTCTTC	4 cut(s)	256, 279, 964, 1070
EarI	CTCTTC	4 cut(s)	256, 279, 964, 1070
Eco130I	CCWWGG	3 cut(s)	671, 887, 1209
Eco147I	AGGCCT	2 cut(s)	676, 789
Eco24I	GRGCYC	2 cut(s)	201, 647
Eco47I	GGWCC	4 cut(s)	97, 746, 761, 766
Eco57I	CTGAAG	4 cut(s)	237, 432, 812, 1094
Eco72I	CACGTG	1 cut(s)	899
Eco81I	CCTNAGG	1 cut(s)	591
EcoNI	CCTNNNNNAGG	1 cut(s)	681
EcoRII	CCWGG	2 cut(s)	751, 775
EcoT14I	CCWWGG	3 cut(s)	671, 887, 1209
EcoT38I	GRGCYC	2 cut(s)	201, 647
ErhI	CCWWGG	3 cut(s)	671, 887, 1209
FaeI	CATG	6 cut(s)	91, 97, 377, 413, 725, 891
FalI	AAGNNNNNCTT	2 cut(s)	430, 462
FatI	CATG	6 cut(s)	87, 93, 373, 409, 721, 887
FbaI	TGATCA	2 cut(s)	337, 427
FblI	GTMKAC	1 cut(s)	1347
Fnu4HI	GCNGC	9 cut(s)	124, 138, 221, 224, 275, 315, 726, 813, 870
FokI	GGATG	2 cut(s)	401, 700
FriOI	GRGCYC	2 cut(s)	201, 647
Fsp4HI	GCNGC	9 cut(s)	124, 138, 221, 224, 275, 315, 726, 813, 870
FspBI	CTAG	3 cut(s)	303, 672, 701
GlaI	GCGC	1 cut(s)	1295
GluI	GCNGC	9 cut(s)	124, 138, 221, 224, 275, 315, 726, 813, 870
GsuI	CTGGAG	1 cut(s)	86
HaeIII	GGCC	5 cut(s)	645, 676, 789, 801, 1313
HapII	CCGG	3 cut(s)	206, 265, 764
HhaI	GCGC	1 cut(s)	1296
Hin1I	GRCGYC	1 cut(s)	1431
Hin1II	CATG	6 cut(s)	91, 97, 377, 413, 725, 891
Hin6I	GCGC	1 cut(s)	1294
HinP1I	GCGC	1 cut(s)	1294
HincII	GTYRAC	2 cut(s)	472, 1435
HindII	GTYRAC	2 cut(s)	472, 1435
HindIII	AAGCTT	1 cut(s)	41
HinfI	GANTC	3 cut(s)	391, 1037, 1229
HpaI	GTTAAC	1 cut(s)	472
HpaII	CCGG	3 cut(s)	206, 265, 764
HphI	GGTGA	1 cut(s)	941
Hpy166II	GTNNAC	6 cut(s)	472, 656, 902, 1348, 1406, 1435
Hpy188I	TCNGA	3 cut(s)	165, 256, 1340
Hpy188III	TCNNGA	6 cut(s)	146, 374, 450, 524, 923, 1424
Hpy8I	GTNNAC	6 cut(s)	472, 656, 902, 1348, 1406, 1435
Hpy99I	CGWCG	1 cut(s)	1433
HpyAV	CCTTC	6 cut(s)	456, 476, 737, 787, 1254, 1430
HpyCH4III	ACNGT	2 cut(s)	1300, 1410
HpyCH4IV	ACGT	4 cut(s)	345, 584, 898, 1431
HpyF10VI	GCNNNNNNNGC	6 cut(s)	166, 196, 274, 731, 821, 875
HpyF3I	CTNAG	5 cut(s)	327, 591, 770, 818, 855
HpySE526I	ACGT	4 cut(s)	345, 584, 898, 1431
Hsp92I	GRCGYC	1 cut(s)	1431
Hsp92II	CATG	6 cut(s)	91, 97, 377, 413, 725, 891
HspAI	GCGC	1 cut(s)	1294
KroI	GCCGGC	1 cut(s)	264
KroNI	GCCGGC	1 cut(s)	266
Ksp22I	TGATCA	2 cut(s)	337, 427
KspAI	GTTAAC	1 cut(s)	472
Kzo9I	GATC	7 cut(s)	337, 427, 910, 1093, 1140, 1240, 1397
LguI	GCTCTTC	1 cut(s)	964
LmnI	GCTCC	4 cut(s)	131, 446, 866, 1177
Lsp1109I	GCAGC	7 cut(s)	124, 232, 235, 286, 301, 712, 799
LweI	GCATC	5 cut(s)	124, 156, 169, 286, 529
MaeI	CTAG	3 cut(s)	303, 672, 701
MaeII	ACGT	4 cut(s)	345, 584, 898, 1431
MaeIII	GTNAC	1 cut(s)	986
MalI	GATC	7 cut(s)	339, 429, 912, 1095, 1142, 1242, 1399
MbiI	CCGCTC	3 cut(s)	126, 869, 984
MboI	GATC	7 cut(s)	337, 427, 910, 1093, 1140, 1240, 1397
MboII	GAAGA	8 cut(s)	161, 204, 243, 296, 302, 981, 1087, 1210
MfeI	CAATTG	2 cut(s)	19, 494
MflI	RGATCY	1 cut(s)	1093
MhlI	GDGCHC	4 cut(s)	201, 647, 658, 1408
MluCI	AATT	5 cut(s)	19, 475, 494, 515, 1204
MlyI	GAGTC	1 cut(s)	1046
MmeI	TCCRAC	2 cut(s)	334, 1318
MroNI	GCCGGC	1 cut(s)	264
MroXI	GAANNNNTTC	1 cut(s)	1264
MseI	TTAA	3 cut(s)	48, 471, 1320
MslI	CAYNNNNRTG	1 cut(s)	92
MspI	CCGG	3 cut(s)	206, 265, 764
MspR9I	CCNGG	3 cut(s)	206, 753, 777
MunI	CAATTG	2 cut(s)	19, 494
Mva1269I	GAATGC	1 cut(s)	898
MvaI	CCWGG	2 cut(s)	753, 777
MvnI	CGCG	2 cut(s)	69, 174
MwoI	GCNNNNNNNGC	6 cut(s)	166, 196, 274, 731, 821, 875
NaeI	GCCGGC	1 cut(s)	266
NciI	CCSGG	1 cut(s)	206
NcoI	CCATGG	1 cut(s)	887
NdeII	GATC	7 cut(s)	337, 427, 910, 1093, 1140, 1240, 1397
NgoMIV	GCCGGC	1 cut(s)	264
NlaIII	CATG	6 cut(s)	91, 97, 377, 413, 725, 891
NlaIV	GGNNCC	4 cut(s)	645, 762, 1095, 1124
NmeAIII	GCCGAG	2 cut(s)	211, 1297
NspI	RCATGY	2 cut(s)	91, 413
PagI	TCATGA	1 cut(s)	373
PceI	AGGCCT	2 cut(s)	676, 789
PciSI	GCTCTTC	1 cut(s)	964
PctI	GAATGC	1 cut(s)	898
PdiI	GCCGGC	1 cut(s)	266
PdmI	GAANNNNTTC	1 cut(s)	1264
PfeI	GAWTC	2 cut(s)	391, 1229
Pfl23II	CGTACG	1 cut(s)	1410
PflFI	GACNNNGTC	1 cut(s)	1430
PkrI	GCNGC	9 cut(s)	125, 139, 222, 225, 276, 316, 727, 814, 871
PleI	GAGTC	1 cut(s)	1045
PmaCI	CACGTG	1 cut(s)	899
PmlI	CACGTG	1 cut(s)	899
PpsI	GAGTC	1 cut(s)	1045
Ppu21I	YACGTR	1 cut(s)	899
Psp6I	CCWGG	2 cut(s)	751, 775
PspCI	CACGTG	1 cut(s)	899
PspGI	CCWGG	2 cut(s)	751, 775
PspLI	CGTACG	1 cut(s)	1410
PspN4I	GGNNCC	4 cut(s)	645, 762, 1095, 1124
PspOMI	GGGCCC	1 cut(s)	643
PspPI	GGNCC	7 cut(s)	97, 643, 644, 746, 761, 766, 1311
PstI	CTGCAG	2 cut(s)	713, 1248
PstNI	CAGNNNCTG	1 cut(s)	1238
PsuI	RGATCY	1 cut(s)	1093
PsyI	GACNNNGTC	1 cut(s)	1430
RsaI	GTAC	2 cut(s)	1136, 1412
RsaNI	GTAC	2 cut(s)	1135, 1411
RseI	CAYNNNNRTG	1 cut(s)	92
SapI	GCTCTTC	1 cut(s)	964
SaqAI	TTAA	3 cut(s)	48, 471, 1320
SatI	GCNGC	9 cut(s)	124, 138, 221, 224, 275, 315, 726, 813, 870
Sau3AI	GATC	7 cut(s)	337, 427, 910, 1093, 1140, 1240, 1397
Sau96I	GGNCC	7 cut(s)	97, 643, 644, 746, 761, 766, 1311
SchI	GAGTC	1 cut(s)	1046
ScrFI	CCNGG	3 cut(s)	206, 753, 777
SduI	GDGCHC	4 cut(s)	201, 647, 658, 1408
SfaNI	GCATC	5 cut(s)	124, 156, 169, 286, 529
SfcI	CTRYAG	2 cut(s)	709, 1244
SinI	GGWCC	4 cut(s)	97, 746, 761, 766
SmiMI	CAYNNNNRTG	1 cut(s)	92
SmlI	CTYRAG	2 cut(s)	681, 923
SmoI	CTYRAG	2 cut(s)	681, 923
SpeI	ACTAGT	1 cut(s)	302
Sse9I	AATT	5 cut(s)	19, 475, 494, 515, 1204
SseBI	AGGCCT	2 cut(s)	676, 789
SsiI	CCGC	5 cut(s)	30, 67, 124, 869, 984
SspMI	CTAG	3 cut(s)	303, 672, 701
StuI	AGGCCT	2 cut(s)	676, 789
StyD4I	CCNGG	3 cut(s)	204, 751, 775
StyI	CCWWGG	3 cut(s)	671, 887, 1209
TaaI	ACNGT	2 cut(s)	1300, 1410
TaiI	ACGT	4 cut(s)	348, 587, 901, 1434
TaqI	TCGA	5 cut(s)	132, 531, 957, 967, 1363
TaqII	GACCGA	1 cut(s)	355
TasI	AATT	5 cut(s)	19, 475, 494, 515, 1204
TauI	GCSGC	2 cut(s)	126, 872
TfiI	GAWTC	2 cut(s)	391, 1229
Tru1I	TTAA	3 cut(s)	48, 471, 1320
Tru9I	TTAA	3 cut(s)	48, 471, 1320
TscAI	CASTG	2 cut(s)	437, 1303
TseI	GCWGC	7 cut(s)	137, 220, 223, 274, 314, 725, 812
TspDTI	ATGAA	6 cut(s)	17, 82, 362, 710, 756, 1070
TspGWI	ACGGA	2 cut(s)	1035, 1410
TspRI	CASTG	2 cut(s)	437, 1303
Tth111I	GACNNNGTC	1 cut(s)	1430
VneI	GTGCAC	2 cut(s)	654, 1404
VpaK11BI	GGWCC	4 cut(s)	97, 746, 761, 766
XagI	CCTNNNNNAGG	1 cut(s)	681
XapI	RAATTY	1 cut(s)	1204
XceI	RCATGY	2 cut(s)	91, 413
XmaJI	CCTAGG	1 cut(s)	671
XmiI	GTMKAC	1 cut(s)	1347
XmnI	GAANNNNTTC	1 cut(s)	1264
XspI	CTAG	3 cut(s)	303, 672, 701
ZraI	GACGTC	1 cut(s)	1432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.