Rhodanese-like domain-containing protein 4 chloroplastic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G01050 AT4G01050 |
| fragaria_vesca | FvH4_7g16190 |
| malus_domestica | MD01G1078500.v1.1 MD07G1147500.v1.1 |
| prunus_persica | Prupe.2G185500_v2.0.a1 Prupe.2G185500_v2.0.a1 |
| pyrus_communis | pycom01g10700 pycom07g14660 |
| rosa_chinensis | RchiOBHm_Chr1g0359191 |
| rosa_laevigata | RLG00000027894 |
| rosa_multiflora | Rmu_co8334595.1_g000001 Rmu_sc0038613.1_g000001 Rmu_ssc0000135.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00297260 |
| rosa_rugosa | Rorug01G0268300 |
| rosa_samantha | Rh1AG282200 Rh1BG248600 Rh1CG266400 Rh1DG277600 |
| rosa_wichuraiana | Rw1G025060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1102 |
| Acc36I | ACCTGC | 1 cut(s) | 1102 |
| AccIII | TCCGGA | 2 cut(s) | 490, 1279 |
| AciI | CCGC | 7 cut(s) | 156, 324, 341, 467, 518, 729, 849 |
| AclWI | GGATC | 1 cut(s) | 969 |
| AcsI | RAATTY | 3 cut(s) | 95, 620, 1201 |
| AcuI | CTGAAG | 2 cut(s) | 389, 723 |
| AfaI | GTAC | 3 cut(s) | 487, 1137, 1209 |
| AgsI | TTSAA | 9 cut(s) | 13, 118, 184, 562, 577, 583, 673, 1251, 1288 |
| AhlI | ACTAGT | 1 cut(s) | 922 |
| AjnI | CCWGG | 2 cut(s) | 1191, 1240 |
| AluBI | AGCT | 9 cut(s) | 24, 122, 640, 677, 917, 1024, 1055, 1151, 1178 |
| AluI | AGCT | 9 cut(s) | 24, 122, 640, 677, 917, 1024, 1055, 1151, 1178 |
| Alw21I | GWGCWC | 1 cut(s) | 1026 |
| Alw26I | GTCTC | 3 cut(s) | 246, 363, 834 |
| AlwI | GGATC | 1 cut(s) | 969 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 367, 1070, 1151 |
| Aor13HI | TCCGGA | 2 cut(s) | 490, 1279 |
| AoxI | GGCC | 2 cut(s) | 6, 432 |
| ApeKI | GCWGC | 8 cut(s) | 17, 163, 677, 851, 917, 1121, 1175, 1315 |
| ApoI | RAATTY | 3 cut(s) | 95, 620, 1201 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1236 |
| AspS9I | GGNCC | 1 cut(s) | 707 |
| AsuC2I | CCSGG | 2 cut(s) | 190, 552 |
| AsuHPI | GGTGA | 4 cut(s) | 62, 437, 551, 733 |
| AvaII | GGWCC | 1 cut(s) | 707 |
| AxyI | CCTNAGG | 1 cut(s) | 1017 |
| BanII | GRGCYC | 2 cut(s) | 818, 1026 |
| BauI | CACGAG | 1 cut(s) | 711 |
| BbsI | GAAGAC | 2 cut(s) | 126, 725 |
| Bbv12I | GWGCWC | 1 cut(s) | 1026 |
| BbvCI | CCTCAGC | 1 cut(s) | 957 |
| BbvI | GCAGC | 7 cut(s) | 29, 150, 664, 863, 904, 1108, 1187 |
| BccI | CCATC | 5 cut(s) | 76, 111, 689, 711, 1318 |
| BceAI | ACGGC | 1 cut(s) | 367 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 290, 324, 626, 660 |
| BciT130I | CCWGG | 2 cut(s) | 1193, 1242 |
| BcnI | CCSGG | 2 cut(s) | 190, 552 |
| BcoDI | GTCTC | 3 cut(s) | 246, 363, 834 |
| BcuI | ACTAGT | 1 cut(s) | 922 |
| BfaI | CTAG | 3 cut(s) | 923, 1125, 1321 |
| BfmI | CTRYAG | 3 cut(s) | 309, 1095, 1179 |
| BfuAI | ACCTGC | 1 cut(s) | 1102 |
| BlpI | GCTNAGC | 1 cut(s) | 913 |
| Bme1390I | CCNGG | 4 cut(s) | 190, 552, 1193, 1242 |
| Bme18I | GGWCC | 1 cut(s) | 707 |
| BmgT120I | GGNCC | 1 cut(s) | 707 |
| BmiI | GGNNCC | 3 cut(s) | 345, 588, 1197 |
| BmrFI | CCNGG | 4 cut(s) | 190, 552, 1193, 1242 |
| BmrI | ACTGGG | 1 cut(s) | 233 |
| BmsI | GCATC | 3 cut(s) | 778, 790, 1307 |
| BmuI | ACTGGG | 1 cut(s) | 233 |
| BpiI | GAAGAC | 2 cut(s) | 126, 725 |
| BpmI | CTGGAG | 1 cut(s) | 1092 |
| Bpu10I | CCTNAGC | 2 cut(s) | 378, 957 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 913 |
| BpuMI | CCSGG | 2 cut(s) | 190, 552 |
| BsaJI | CCNNGG | 6 cut(s) | 151, 198, 737, 838, 1191, 1241 |
| BsaWI | WCCGGW | 3 cut(s) | 490, 857, 1279 |
| Bse1I | ACTGG | 2 cut(s) | 228, 1064 |
| Bse21I | CCTNAGG | 1 cut(s) | 1017 |
| BseAI | TCCGGA | 2 cut(s) | 490, 1279 |
| BseBI | CCWGG | 2 cut(s) | 1193, 1242 |
| BseDI | CCNNGG | 6 cut(s) | 151, 198, 737, 838, 1191, 1241 |
| BseGI | GGATG | 4 cut(s) | 103, 499, 609, 722 |
| BseMII | CTCAG | 6 cut(s) | 374, 455, 752, 831, 927, 948 |
| BseNI | ACTGG | 2 cut(s) | 228, 1064 |
| BseRI | GAGGAG | 1 cut(s) | 443 |
| BseXI | GCAGC | 7 cut(s) | 29, 150, 664, 863, 904, 1108, 1187 |
| BsgI | GTGCAG | 2 cut(s) | 903, 1074 |
| BshFI | GGCC | 2 cut(s) | 8, 434 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1026 |
| BsiSI | CCGG | 6 cut(s) | 189, 491, 551, 858, 1280, 1295 |
| BslFI | GGGAC | 1 cut(s) | 1063 |
| BsmAI | GTCTC | 3 cut(s) | 246, 363, 834 |
| BsmFI | GGGAC | 1 cut(s) | 1063 |
| BsnI | GGCC | 2 cut(s) | 8, 434 |
| Bsp1286I | GDGCHC | 2 cut(s) | 818, 1026 |
| Bsp13I | TCCGGA | 2 cut(s) | 490, 1279 |
| Bsp1407I | TGTACA | 1 cut(s) | 1135 |
| Bsp143I | GATC | 3 cut(s) | 38, 458, 961 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 913 |
| Bsp19I | CCATGG | 1 cut(s) | 151 |
| BspACI | CCGC | 7 cut(s) | 156, 324, 341, 467, 518, 729, 849 |
| BspANI | GGCC | 2 cut(s) | 8, 434 |
| BspCNI | CTCAG | 6 cut(s) | 373, 454, 753, 830, 926, 949 |
| BspEI | TCCGGA | 2 cut(s) | 490, 1279 |
| BspLI | GGNNCC | 3 cut(s) | 345, 588, 1197 |
| BspMAI | CTGCAG | 2 cut(s) | 313, 1099 |
| BspMI | ACCTGC | 1 cut(s) | 1102 |
| BspPI | GGATC | 1 cut(s) | 969 |
| BspQI | GCTCTTC | 2 cut(s) | 1062, 1089 |
| BsrGI | TGTACA | 1 cut(s) | 1135 |
| BsrI | ACTGG | 2 cut(s) | 228, 1064 |
| BssECI | CCNNGG | 6 cut(s) | 151, 198, 737, 838, 1191, 1241 |
| BssMI | GATC | 3 cut(s) | 38, 458, 961 |
| BssSI | CACGAG | 1 cut(s) | 711 |
| BssT1I | CCWWGG | 4 cut(s) | 151, 198, 737, 838 |
| Bst2BI | CACGAG | 1 cut(s) | 711 |
| Bst2UI | CCWGG | 2 cut(s) | 1193, 1242 |
| Bst4CI | ACNGT | 5 cut(s) | 235, 281, 661, 1072, 1135 |
| Bst6I | CTCTTC | 2 cut(s) | 1062, 1089 |
| BstAUI | TGTACA | 1 cut(s) | 1135 |
| BstC8I | GCNNGC | 5 cut(s) | 22, 161, 322, 465, 937 |
| BstDEI | CTNAG | 8 cut(s) | 360, 378, 441, 761, 817, 913, 957, 1017 |
| BstDSI | CCRYGG | 1 cut(s) | 151 |
| BstF5I | GGATG | 4 cut(s) | 103, 499, 609, 722 |
| BstKTI | GATC | 3 cut(s) | 41, 461, 964 |
| BstMAI | GTCTC | 3 cut(s) | 246, 363, 834 |
| BstMBI | GATC | 3 cut(s) | 38, 458, 961 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 14, 194, 317, 338, 379, 407, 683, 1088, 1184 |
| BstNI | CCWGG | 2 cut(s) | 1193, 1242 |
| BstSCI | CCNGG | 4 cut(s) | 188, 550, 1191, 1240 |
| BstSFI | CTRYAG | 3 cut(s) | 309, 1095, 1179 |
| BstV1I | GCAGC | 7 cut(s) | 29, 150, 664, 863, 904, 1108, 1187 |
| BstV2I | GAAGAC | 2 cut(s) | 126, 725 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 717 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1017 |
| BsuRI | GGCC | 2 cut(s) | 8, 434 |
| BtgI | CCRYGG | 1 cut(s) | 151 |
| BtgZI | GCGATG | 1 cut(s) | 1296 |
| BtsCI | GGATG | 4 cut(s) | 103, 499, 609, 722 |
| BtsI | GCAGTG | 1 cut(s) | 71 |
| BtsIMutI | CAGTG | 5 cut(s) | 71, 221, 286, 657, 758 |
| BveI | ACCTGC | 1 cut(s) | 1102 |
| Cac8I | GCNNGC | 5 cut(s) | 22, 161, 322, 465, 937 |
| CaiI | CAGNNNCTG | 3 cut(s) | 367, 1070, 1151 |
| Cfr13I | GGNCC | 1 cut(s) | 707 |
| Csp6I | GTAC | 3 cut(s) | 486, 1136, 1208 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 991, 1026 |
| CviAII | CATG | 1 cut(s) | 152 |
| CviQI | GTAC | 3 cut(s) | 486, 1136, 1208 |
| DdeI | CTNAG | 8 cut(s) | 360, 378, 441, 761, 817, 913, 957, 1017 |
| DpnI | GATC | 3 cut(s) | 40, 460, 963 |
| DpnII | GATC | 3 cut(s) | 38, 458, 961 |
| Eam1104I | CTCTTC | 2 cut(s) | 1062, 1089 |
| EarI | CTCTTC | 2 cut(s) | 1062, 1089 |
| Ecl136II | GAGCTC | 1 cut(s) | 1024 |
| Eco130I | CCWWGG | 4 cut(s) | 151, 198, 737, 838 |
| Eco147I | AGGCCT | 1 cut(s) | 8 |
| Eco24I | GRGCYC | 2 cut(s) | 818, 1026 |
| Eco47I | GGWCC | 1 cut(s) | 707 |
| Eco53kI | GAGCTC | 1 cut(s) | 1024 |
| Eco57I | CTGAAG | 2 cut(s) | 389, 723 |
| Eco81I | CCTNAGG | 1 cut(s) | 1017 |
| EcoICRI | GAGCTC | 1 cut(s) | 1024 |
| EcoRII | CCWGG | 2 cut(s) | 1191, 1240 |
| EcoT14I | CCWWGG | 4 cut(s) | 151, 198, 737, 838 |
| EcoT38I | GRGCYC | 2 cut(s) | 818, 1026 |
| ErhI | CCWWGG | 4 cut(s) | 151, 198, 737, 838 |
| FaeI | CATG | 1 cut(s) | 155 |
| FaiI | YATR | 6 cut(s) | 35, 153, 414, 455, 684, 1037 |
| FaqI | GGGAC | 1 cut(s) | 1063 |
| FatI | CATG | 1 cut(s) | 151 |
| FokI | GGATG | 4 cut(s) | 90, 506, 596, 729 |
| FriOI | GRGCYC | 2 cut(s) | 818, 1026 |
| FspBI | CTAG | 3 cut(s) | 923, 1125, 1321 |
| GsuI | CTGGAG | 1 cut(s) | 1092 |
| HaeIII | GGCC | 2 cut(s) | 8, 434 |
| HapII | CCGG | 6 cut(s) | 189, 491, 551, 858, 1280, 1295 |
| Hin1II | CATG | 1 cut(s) | 155 |
| HincII | GTYRAC | 1 cut(s) | 394 |
| HindII | GTYRAC | 1 cut(s) | 394 |
| HindIII | AAGCTT | 2 cut(s) | 22, 120 |
| HinfI | GANTC | 4 cut(s) | 131, 352, 395, 1232 |
| HpaII | CCGG | 6 cut(s) | 189, 491, 551, 858, 1280, 1295 |
| HphI | GGTGA | 4 cut(s) | 62, 437, 551, 733 |
| Hpy166II | GTNNAC | 3 cut(s) | 394, 532, 724 |
| Hpy188I | TCNGA | 4 cut(s) | 144, 369, 637, 820 |
| Hpy188III | TCNNGA | 6 cut(s) | 275, 491, 559, 997, 1109, 1280 |
| Hpy8I | GTNNAC | 3 cut(s) | 394, 532, 724 |
| Hpy99I | CGWCG | 1 cut(s) | 1031 |
| HpyAV | CCTTC | 5 cut(s) | 19, 87, 98, 508, 698 |
| HpyCH4III | ACNGT | 5 cut(s) | 235, 281, 661, 1072, 1135 |
| HpyCH4V | TGCA | 9 cut(s) | 17, 311, 416, 647, 803, 920, 935, 1091, 1097 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 14, 194, 317, 338, 379, 407, 683, 1088, 1184 |
| HpyF3I | CTNAG | 8 cut(s) | 360, 378, 441, 761, 817, 913, 957, 1017 |
| Hsp92II | CATG | 1 cut(s) | 155 |
| Kpn2I | TCCGGA | 2 cut(s) | 490, 1279 |
| Kzo9I | GATC | 3 cut(s) | 38, 458, 961 |
| LguI | GCTCTTC | 2 cut(s) | 1062, 1089 |
| LmnI | GCTCC | 2 cut(s) | 586, 1021 |
| Lsp1109I | GCAGC | 7 cut(s) | 29, 150, 664, 863, 904, 1108, 1187 |
| LweI | GCATC | 3 cut(s) | 778, 790, 1307 |
| MaeI | CTAG | 3 cut(s) | 923, 1125, 1321 |
| MaeIII | GTNAC | 4 cut(s) | 50, 295, 655, 1066 |
| MalI | GATC | 3 cut(s) | 40, 460, 963 |
| MboI | GATC | 3 cut(s) | 38, 458, 961 |
| MboII | GAAGA | 9 cut(s) | 69, 126, 165, 523, 554, 574, 725, 1049, 1076 |
| MhlI | GDGCHC | 2 cut(s) | 818, 1026 |
| MluCI | AATT | 8 cut(s) | 95, 419, 620, 650, 778, 884, 1044, 1201 |
| MlyI | GAGTC | 2 cut(s) | 140, 389 |
| MmeI | TCCRAC | 1 cut(s) | 787 |
| MroI | TCCGGA | 2 cut(s) | 490, 1279 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1236 |
| MseI | TTAA | 4 cut(s) | 690, 782, 795, 1224 |
| MslI | CAYNNNNRTG | 1 cut(s) | 715 |
| MspA1I | CMGCKG | 3 cut(s) | 467, 729, 917 |
| MspI | CCGG | 6 cut(s) | 189, 491, 551, 858, 1280, 1295 |
| MspR9I | CCNGG | 4 cut(s) | 190, 552, 1193, 1242 |
| MvaI | CCWGG | 2 cut(s) | 1193, 1242 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 14, 194, 317, 338, 379, 407, 683, 1088, 1184 |
| NciI | CCSGG | 2 cut(s) | 190, 552 |
| NcoI | CCATGG | 1 cut(s) | 151 |
| NdeII | GATC | 3 cut(s) | 38, 458, 961 |
| NlaIII | CATG | 1 cut(s) | 155 |
| NlaIV | GGNNCC | 3 cut(s) | 345, 588, 1197 |
| NmuCI | GTSAC | 3 cut(s) | 50, 295, 655 |
| PaqCI | CACCTGC | 1 cut(s) | 1102 |
| PceI | AGGCCT | 1 cut(s) | 8 |
| PciSI | GCTCTTC | 2 cut(s) | 1062, 1089 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1236 |
| PfeI | GAWTC | 2 cut(s) | 352, 1232 |
| PleI | GAGTC | 2 cut(s) | 139, 389 |
| PpsI | GAGTC | 2 cut(s) | 139, 389 |
| Psp124BI | GAGCTC | 1 cut(s) | 1026 |
| Psp6I | CCWGG | 2 cut(s) | 1191, 1240 |
| PspGI | CCWGG | 2 cut(s) | 1191, 1240 |
| PspN4I | GGNNCC | 3 cut(s) | 345, 588, 1197 |
| PspPI | GGNCC | 1 cut(s) | 707 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 255, 287 |
| PstI | CTGCAG | 2 cut(s) | 313, 1099 |
| PstNI | CAGNNNCTG | 3 cut(s) | 367, 1070, 1151 |
| PvuII | CAGCTG | 1 cut(s) | 917 |
| RsaI | GTAC | 3 cut(s) | 487, 1137, 1209 |
| RsaNI | GTAC | 3 cut(s) | 486, 1136, 1208 |
| RseI | CAYNNNNRTG | 1 cut(s) | 715 |
| SacI | GAGCTC | 1 cut(s) | 1026 |
| SapI | GCTCTTC | 2 cut(s) | 1062, 1089 |
| SaqAI | TTAA | 4 cut(s) | 690, 782, 795, 1224 |
| Sau3AI | GATC | 3 cut(s) | 38, 458, 961 |
| Sau96I | GGNCC | 1 cut(s) | 707 |
| SchI | GAGTC | 2 cut(s) | 140, 389 |
| ScrFI | CCNGG | 4 cut(s) | 190, 552, 1193, 1242 |
| SduI | GDGCHC | 2 cut(s) | 818, 1026 |
| SfaNI | GCATC | 3 cut(s) | 778, 790, 1307 |
| SfcI | CTRYAG | 3 cut(s) | 309, 1095, 1179 |
| SinI | GGWCC | 1 cut(s) | 707 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 715 |
| SpeI | ACTAGT | 1 cut(s) | 922 |
| Sse9I | AATT | 8 cut(s) | 95, 419, 620, 650, 778, 884, 1044, 1201 |
| SseBI | AGGCCT | 1 cut(s) | 8 |
| SsiI | CCGC | 7 cut(s) | 156, 324, 341, 467, 518, 729, 849 |
| SspMI | CTAG | 3 cut(s) | 923, 1125, 1321 |
| SstI | GAGCTC | 1 cut(s) | 1026 |
| StuI | AGGCCT | 1 cut(s) | 8 |
| StyD4I | CCNGG | 4 cut(s) | 188, 550, 1191, 1240 |
| StyI | CCWWGG | 4 cut(s) | 151, 198, 737, 838 |
| TaaI | ACNGT | 5 cut(s) | 235, 281, 661, 1072, 1135 |
| TaqI | TCGA | 5 cut(s) | 524, 615, 964, 1029, 1158 |
| TaqII | GACCGA | 1 cut(s) | 314 |
| TasI | AATT | 8 cut(s) | 95, 419, 620, 650, 778, 884, 1044, 1201 |
| TatI | WGTACW | 1 cut(s) | 1135 |
| TauI | GCSGC | 2 cut(s) | 159, 851 |
| TfiI | GAWTC | 2 cut(s) | 352, 1232 |
| Tru1I | TTAA | 4 cut(s) | 690, 782, 795, 1224 |
| Tru9I | TTAA | 4 cut(s) | 690, 782, 795, 1224 |
| TscAI | CASTG | 5 cut(s) | 78, 228, 286, 664, 765 |
| TseFI | GTSAC | 3 cut(s) | 50, 295, 655 |
| TseI | GCWGC | 8 cut(s) | 17, 163, 677, 851, 917, 1121, 1175, 1315 |
| Tsp45I | GTSAC | 3 cut(s) | 50, 295, 655 |
| TspDTI | ATGAA | 2 cut(s) | 126, 598 |
| TspRI | CASTG | 5 cut(s) | 78, 228, 286, 664, 765 |
| VpaK11BI | GGWCC | 1 cut(s) | 707 |
| XapI | RAATTY | 3 cut(s) | 95, 620, 1201 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1236 |
| XspI | CTAG | 3 cut(s) | 923, 1125, 1321 |