Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010301

Physical Location & Seq

Genomic Coordinates Reverse (-)

22661129 .. 22664959

Gene Structure 3831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G185500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGAGGCCCTCAATGCAGCAAGCTTGACCCCCATATCTGTTCTTGGTGACAGAAAAAAAGAACCCAGAAAATTTCCATCACTGCCCACCATTTCCCTACCCAAATTCTCAAATTCCACAAGTCTTAGCACCACCCCACAAGCTTCACAGGAGTCTTCATCTAGGAGCTTTCATGGTGGCCTGTTGCTTTTATCTTCTGTTTTCAATACTGGGTTTGCCAAAGCTTTGACATATGAAGAAGCATTGGGGCAATCTGTGAGTACCAGTACAGGTGGAGACTTGGAAGCAAGTGGGATTCTTGATAATGTTACTGCTTTTGTGACTGAGAACCCTGCAGTTATAGCTGGTGGTTTTGCCATTTTGGCTGTTCCCCTGGTTTTGTCTCAGGTTCTGAAGCCTCCCAAGCCATGGGGTGTTGATACTGCAAGAAATGCTTACGCAAAATTGGGCGATGATGCCAATGCTCAGTTGCTTGATATCAGATCACCAGCTGAGTTTAGGCAAGTTGGTACACCGGATGTCCGGGGTCTGGGGAAGAAGGCGGTGCCAATTGTTTACAAAGGTGAAGATAAGCCAGGTTTCTTAAAGAAGCTCTCTTTGAAGTTCAAGGAACCAGAAAATACCACATTGTTCGTCCTAGATAAATTTGATGGGAACTCCGAACTGGTTGCAGAGTTAGTCACTGTAAATGGGTTCAAAGCTGCGTATGCCATAAAAGATGGCGCAGAAGGACCCCGGGGATGGGTGAATAGCAGTCTTCCTTGGACACCACCAACAAAATTACTGTCTCTTGATTTTGGCAATTTAGCGGATGCTATTGGTGATGCCGTTGGAGAGGGATCAGGTTCCTTGTCTGTTTCCCTTGGGATTGCTGCAGCAACTGGATTGGGTTTATTGGCTTTTACTGAGTTAGAAACAATCCTCCAACTCTTAGGCTCAGCTGCACTAGTTCAGTTTGCGAGCAAGAAACTCCTTTTTGCTGAGGATCGAAAAGCAACTCTACAAGAAGTTGATAAGTTCTTAACCACCAAGGTTGCCCCTAAGGAGCTTGTTGATGACATAAAGCAAATCGGCACAGCTCTTCTGCCAGTGTCTGTGACTAGCAAAGGTCTTCCTGCACCGGCAGAAGCAACCCCAGAGCCTACTGCTGCTAATGATACTGTACAGAAAGCAGAAGCTGCTGTGGAGCTTAAAGTAGAAGCAGCTGCAGAAGCTGCTCCTGAAATAAATTCAGTACCCAAACCAGAAGTTAAAGCAGAATCACTTCCCGGGATTTCGAAACCACTTTCTCCATTCCCTTATTATCCTGATTTCAAGCCTCCAGCTTCTCCCCGCCCATCCCAGCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004568 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006022 GO:0006026 GO:0006030 GO:0006032 GO:0006040 GO:0006091 GO:0006807 GO:0006950 GO:0006952 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009767 GO:0009772 GO:0009941 GO:0009987 GO:0015979 GO:0016020 GO:0016787 GO:0016798 GO:0017144 GO:0019684 GO:0022900 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032991 GO:0034357 GO:0042651 GO:0042737 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046348 GO:0050896 GO:0051704 GO:0051707 GO:0055035 GO:0055114 GO:0071704 GO:0097367 GO:0098542 GO:0098796 GO:0098807 GO:1901071 GO:1901072 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

450

Amino Acids

47.06

Weight (kDa)

5.26

Isoelectric Point (pI)

30.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01050 AT4G01050
fragaria_vesca	FvH4_7g16190
malus_domestica	MD01G1078500.v1.1 MD07G1147500.v1.1
prunus_persica	Prupe.2G185500_v2.0.a1 Prupe.2G185500_v2.0.a1
pyrus_communis	pycom01g10700 pycom07g14660
rosa_chinensis	RchiOBHm_Chr1g0359191
rosa_laevigata	RLG00000027894
rosa_multiflora	Rmu_co8334595.1_g000001 Rmu_sc0038613.1_g000001 Rmu_ssc0000135.1_g000018
rosa_roxburghii	Rroxscaffold_4G00297260
rosa_rugosa	Rorug01G0268300
rosa_samantha	Rh1AG282200 Rh1BG248600 Rh1CG266400 Rh1DG277600
rosa_wichuraiana	Rw1G025060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	544
AccB7I	CCANNNNNTGG	1 cut(s)	408
AciI	CCGC	3 cut(s)	542, 809, 1333
AclWI	GGATC	2 cut(s)	847, 993
AcsI	RAATTY	5 cut(s)	71, 104, 112, 644, 1228
AcuI	CTGAAG	1 cut(s)	413
AfaI	GTAC	5 cut(s)	262, 268, 511, 1164, 1236
AfiI	CCNNNNNNNGG	4 cut(s)	408, 529, 741, 742
AgsI	TTSAA	5 cut(s)	205, 601, 607, 697, 1315
AhlI	ACTAGT	1 cut(s)	946
AjnI	CCWGG	2 cut(s)	372, 574
Alw26I	GTCTC	3 cut(s)	270, 387, 792
AlwI	GGATC	2 cut(s)	847, 993
AlwNI	CAGNNNCTG	5 cut(s)	391, 881, 1094, 1178, 1214
Ama87I	CYCGRG	2 cut(s)	735, 1268
AoxI	GGCC	2 cut(s)	6, 178
ApoI	RAATTY	5 cut(s)	71, 104, 112, 644, 1228
ArsI	GACNNNNNNTTYG	2 cut(s)	770, 802
Asp700I	GAANNNNTTC	1 cut(s)	1263
AspLEI	GCGC	1 cut(s)	725
AspS9I	GGNCC	2 cut(s)	7, 731
AsuC2I	CCSGG	5 cut(s)	524, 736, 737, 1269, 1270
AsuHPI	GGTGA	5 cut(s)	59, 477, 575, 757, 833
AsuII	TTCGAA	1 cut(s)	1277
AvaI	CYCGRG	2 cut(s)	735, 1268
AvaII	GGWCC	1 cut(s)	731
AxyI	CCTNAGG	1 cut(s)	1041
BanI	GGYRCC	1 cut(s)	544
BbsI	GAAGAC	3 cut(s)	147, 749, 1103
BbvCI	CCTCAGC	1 cut(s)	981
BccI	CCATC	5 cut(s)	85, 644, 713, 735, 1345
BceAI	ACGGC	1 cut(s)	812
BcgI	CGANNNNNNTGC	2 cut(s)	650, 684
BciT130I	CCWGG	2 cut(s)	374, 576
BcnI	CCSGG	5 cut(s)	524, 736, 737, 1269, 1270
BcoDI	GTCTC	3 cut(s)	270, 387, 792
BcuI	ACTAGT	1 cut(s)	946
BfaI	CTAG	5 cut(s)	162, 638, 947, 1101, 1348
BfmI	CTRYAG	3 cut(s)	333, 873, 1206
BglI	GCCNNNNNGGC	1 cut(s)	362
BlpI	GCTNAGC	1 cut(s)	937
Bme1390I	CCNGG	7 cut(s)	374, 524, 576, 736, 737, 1269, 1270
Bme18I	GGWCC	1 cut(s)	731
BmeT110I	CYCGRG	2 cut(s)	735, 1268
BmgT120I	GGNCC	2 cut(s)	7, 731
BmiI	GGNNCC	4 cut(s)	546, 612, 733, 847
BmrFI	CCNGG	7 cut(s)	374, 524, 576, 736, 737, 1269, 1270
BmrI	ACTGGG	1 cut(s)	219
BmsI	GCATC	3 cut(s)	445, 802, 814
BmuI	ACTGGG	1 cut(s)	219
BpiI	GAAGAC	3 cut(s)	147, 749, 1103
BpmI	CTGGAG	1 cut(s)	1305
Bpu10I	CCTNAGC	1 cut(s)	981
Bpu1102I	GCTNAGC	1 cut(s)	937
Bpu14I	TTCGAA	1 cut(s)	1277
BpuMI	CCSGG	5 cut(s)	524, 736, 737, 1269, 1270
BsaWI	WCCGGW	1 cut(s)	514
Bsc4I	CCNNNNNNNGG	4 cut(s)	408, 529, 741, 742
Bse118I	RCCGGY	1 cut(s)	1120
Bse1I	ACTGG	5 cut(s)	214, 264, 669, 886, 1088
Bse21I	CCTNAGG	1 cut(s)	1041
BseBI	CCWGG	2 cut(s)	374, 576
BseGI	GGATG	4 cut(s)	523, 746, 817, 1337
BseLI	CCNNNNNNNGG	4 cut(s)	408, 529, 741, 742
BseMII	CTCAG	7 cut(s)	315, 398, 479, 483, 897, 951, 972
BseNI	ACTGG	5 cut(s)	214, 264, 669, 886, 1088
BseYI	CCCAGC	1 cut(s)	1341
BsgI	GTGCAG	2 cut(s)	927, 1101
BshFI	GGCC	2 cut(s)	8, 180
BshNI	GGYRCC	1 cut(s)	544
BsiHKCI	CYCGRG	2 cut(s)	735, 1268
BsiSI	CCGG	5 cut(s)	515, 523, 736, 1121, 1269
BslI	CCNNNNNNNGG	4 cut(s)	408, 529, 741, 742
BsmAI	GTCTC	3 cut(s)	270, 387, 792
BsnI	GGCC	2 cut(s)	8, 180
BsoBI	CYCGRG	2 cut(s)	735, 1268
Bsp119I	TTCGAA	1 cut(s)	1277
Bsp1407I	TGTACA	1 cut(s)	1162
Bsp143I	GATC	3 cut(s)	482, 839, 985
Bsp1720I	GCTNAGC	1 cut(s)	937
Bsp19I	CCATGG	1 cut(s)	407
BspACI	CCGC	3 cut(s)	542, 809, 1333
BspANI	GGCC	2 cut(s)	8, 180
BspCNI	CTCAG	7 cut(s)	316, 397, 478, 484, 898, 950, 973
BspLI	GGNNCC	4 cut(s)	546, 612, 733, 847
BspMAI	CTGCAG	3 cut(s)	337, 877, 1210
BspPI	GGATC	2 cut(s)	847, 993
BspQI	GCTCTTC	1 cut(s)	1086
BspT104I	TTCGAA	1 cut(s)	1277
BspT107I	GGYRCC	1 cut(s)	544
BsrFI	RCCGGY	1 cut(s)	1120
BsrGI	TGTACA	1 cut(s)	1162
BsrI	ACTGG	5 cut(s)	214, 264, 669, 886, 1088
BssAI	RCCGGY	1 cut(s)	1120
BssMI	GATC	3 cut(s)	482, 839, 985
BssT1I	CCWWGG	4 cut(s)	407, 761, 862, 1029
Bst2UI	CCWGG	2 cut(s)	374, 576
Bst4CI	ACNGT	3 cut(s)	685, 786, 1162
Bst6I	CTCTTC	1 cut(s)	1086
BstAPI	GCANNNNNTGC	3 cut(s)	431, 1178, 1214
BstAUI	TGTACA	1 cut(s)	1162
BstBI	TTCGAA	1 cut(s)	1277
BstC8I	GCNNGC	2 cut(s)	22, 961
BstDSI	CCRYGG	1 cut(s)	407
BstF5I	GGATG	4 cut(s)	523, 746, 817, 1337
BstHHI	GCGC	1 cut(s)	725
BstKTI	GATC	3 cut(s)	485, 842, 988
BstMAI	GTCTC	3 cut(s)	270, 387, 792
BstMBI	GATC	3 cut(s)	482, 839, 985
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 341, 362, 403, 431, 707, 1178, 1211, 1214
BstNI	CCWGG	2 cut(s)	374, 576
BstSCI	CCNGG	7 cut(s)	372, 522, 574, 734, 735, 1267, 1268
BstSFI	CTRYAG	3 cut(s)	333, 873, 1206
BstV2I	GAAGAC	3 cut(s)	147, 749, 1103
Bsu36I	CCTNAGG	1 cut(s)	1041
BsuRI	GGCC	2 cut(s)	8, 180
BtgI	CCRYGG	1 cut(s)	407
BtgZI	GCGATG	1 cut(s)	465
BtsCI	GGATG	4 cut(s)	523, 746, 817, 1337
BtsI	GCAGTG	1 cut(s)	80
BtsIMutI	CAGTG	3 cut(s)	80, 681, 1095
Cac8I	GCNNGC	2 cut(s)	22, 961
CaiI	CAGNNNCTG	5 cut(s)	391, 881, 1094, 1178, 1214
CfoI	GCGC	1 cut(s)	725
Cfr10I	RCCGGY	1 cut(s)	1120
Cfr13I	GGNCC	2 cut(s)	7, 731
Cfr9I	CCCGGG	2 cut(s)	735, 1268
Csp6I	GTAC	5 cut(s)	261, 267, 510, 1163, 1235
CspCI	CAANNNNNGTGG	2 cut(s)	1015, 1050
CviAII	CATG	2 cut(s)	173, 408
CviQI	GTAC	5 cut(s)	261, 267, 510, 1163, 1235
DpnI	GATC	3 cut(s)	484, 841, 987
DpnII	GATC	3 cut(s)	482, 839, 985
Eam1104I	CTCTTC	1 cut(s)	1086
EarI	CTCTTC	1 cut(s)	1086
Eco130I	CCWWGG	4 cut(s)	407, 761, 862, 1029
Eco32I	GATATC	1 cut(s)	478
Eco47I	GGWCC	1 cut(s)	731
Eco57I	CTGAAG	1 cut(s)	413
Eco81I	CCTNAGG	1 cut(s)	1041
Eco88I	CYCGRG	2 cut(s)	735, 1268
EcoO109I	RGGNCCY	2 cut(s)	7, 731
EcoRII	CCWGG	2 cut(s)	372, 574
EcoRV	GATATC	1 cut(s)	478
EcoT14I	CCWWGG	4 cut(s)	407, 761, 862, 1029
ErhI	CCWWGG	4 cut(s)	407, 761, 862, 1029
FaeI	CATG	2 cut(s)	176, 411
FaiI	YATR	9 cut(s)	35, 174, 232, 234, 341, 409, 708, 713, 1061
FalI	AAGNNNNNCTT	2 cut(s)	418, 450
FatI	CATG	2 cut(s)	172, 407
FauI	CCCGC	1 cut(s)	1340
FauNDI	CATATG	1 cut(s)	232
FokI	GGATG	4 cut(s)	530, 753, 824, 1324
FspBI	CTAG	5 cut(s)	162, 638, 947, 1101, 1348
GlaI	GCGC	1 cut(s)	724
GsaI	CCCAGC	1 cut(s)	1345
GsuI	CTGGAG	1 cut(s)	1305
HaeIII	GGCC	2 cut(s)	8, 180
HapII	CCGG	5 cut(s)	515, 523, 736, 1121, 1269
HhaI	GCGC	1 cut(s)	725
Hin1II	CATG	2 cut(s)	176, 411
Hin6I	GCGC	1 cut(s)	723
HinP1I	GCGC	1 cut(s)	723
HindIII	AAGCTT	3 cut(s)	22, 141, 222
HinfI	GANTC	3 cut(s)	152, 295, 1259
HpaII	CCGG	5 cut(s)	515, 523, 736, 1121, 1269
HphI	GGTGA	5 cut(s)	59, 477, 575, 757, 833
Hpy166II	GTNNAC	2 cut(s)	512, 556
Hpy188I	TCNGA	3 cut(s)	393, 482, 661
Hpy188III	TCNNGA	4 cut(s)	299, 791, 1220, 1307
Hpy8I	GTNNAC	2 cut(s)	512, 556
HpyAV	CCTTC	2 cut(s)	532, 722
HpyCH4III	ACNGT	3 cut(s)	685, 786, 1162
HpyCH4V	TGCA	8 cut(s)	17, 335, 425, 671, 875, 944, 1118, 1208
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 341, 362, 403, 431, 707, 1178, 1211, 1214
Hsp92II	CATG	2 cut(s)	176, 411
HspAI	GCGC	1 cut(s)	723
Kzo9I	GATC	3 cut(s)	482, 839, 985
LguI	GCTCTTC	1 cut(s)	1086
LmnI	GCTCC	4 cut(s)	165, 1045, 1186, 1222
LweI	GCATC	3 cut(s)	445, 802, 814
MaeI	CTAG	5 cut(s)	162, 638, 947, 1101, 1348
MaeIII	GTNAC	5 cut(s)	47, 307, 319, 679, 1096
MalI	GATC	3 cut(s)	484, 841, 987
MboI	GATC	3 cut(s)	482, 839, 985
MboII	GAAGA	8 cut(s)	147, 186, 248, 547, 578, 749, 1073, 1103
MfeI	CAATTG	1 cut(s)	549
MluCI	AATT	9 cut(s)	71, 104, 112, 443, 549, 644, 779, 802, 1228
MlyI	GAGTC	1 cut(s)	161
MmeI	TCCRAC	2 cut(s)	811, 949
MnlI	CCTC	6 cut(s)	20, 408, 829, 932, 976, 1329
MroXI	GAANNNNTTC	1 cut(s)	1263
MseI	TTAA	4 cut(s)	584, 1022, 1191, 1251
MspA1I	CMGCKG	3 cut(s)	491, 941, 1205
MspI	CCGG	5 cut(s)	515, 523, 736, 1121, 1269
MspR9I	CCNGG	7 cut(s)	374, 524, 576, 736, 737, 1269, 1270
MunI	CAATTG	1 cut(s)	549
MvaI	CCWGG	2 cut(s)	374, 576
MwoI	GCNNNNNNNGC	9 cut(s)	14, 341, 362, 403, 431, 707, 1178, 1211, 1214
NciI	CCSGG	5 cut(s)	524, 736, 737, 1269, 1270
NcoI	CCATGG	1 cut(s)	407
NdeI	CATATG	1 cut(s)	232
NdeII	GATC	3 cut(s)	482, 839, 985
NlaIII	CATG	2 cut(s)	176, 411
NlaIV	GGNNCC	4 cut(s)	546, 612, 733, 847
NmuCI	GTSAC	4 cut(s)	47, 319, 679, 1096
NspV	TTCGAA	1 cut(s)	1277
PciSI	GCTCTTC	1 cut(s)	1086
PdmI	GAANNNNTTC	1 cut(s)	1263
PfeI	GAWTC	2 cut(s)	295, 1259
PflMI	CCANNNNNTGG	1 cut(s)	408
PleI	GAGTC	1 cut(s)	160
PpsI	GAGTC	1 cut(s)	160
PpuMI	RGGWCCY	1 cut(s)	731
Psp5II	RGGWCCY	1 cut(s)	731
Psp6I	CCWGG	2 cut(s)	372, 574
PspFI	CCCAGC	1 cut(s)	1341
PspGI	CCWGG	2 cut(s)	372, 574
PspN4I	GGNNCC	4 cut(s)	546, 612, 733, 847
PspPI	GGNCC	2 cut(s)	7, 731
PspPPI	RGGWCCY	1 cut(s)	731
PstI	CTGCAG	3 cut(s)	337, 877, 1210
PstNI	CAGNNNCTG	5 cut(s)	391, 881, 1094, 1178, 1214
PvuII	CAGCTG	3 cut(s)	491, 941, 1205
RsaI	GTAC	5 cut(s)	262, 268, 511, 1164, 1236
RsaNI	GTAC	5 cut(s)	261, 267, 510, 1163, 1235
SapI	GCTCTTC	1 cut(s)	1086
SaqAI	TTAA	4 cut(s)	584, 1022, 1191, 1251
Sau3AI	GATC	3 cut(s)	482, 839, 985
Sau96I	GGNCC	2 cut(s)	7, 731
SchI	GAGTC	1 cut(s)	161
ScrFI	CCNGG	7 cut(s)	374, 524, 576, 736, 737, 1269, 1270
SfaNI	GCATC	3 cut(s)	445, 802, 814
SfcI	CTRYAG	3 cut(s)	333, 873, 1206
SfuI	TTCGAA	1 cut(s)	1277
SinI	GGWCC	1 cut(s)	731
SmaI	CCCGGG	2 cut(s)	737, 1270
SpeI	ACTAGT	1 cut(s)	946
Sse9I	AATT	9 cut(s)	71, 104, 112, 443, 549, 644, 779, 802, 1228
SsiI	CCGC	3 cut(s)	542, 809, 1333
SspMI	CTAG	5 cut(s)	162, 638, 947, 1101, 1348
StyD4I	CCNGG	7 cut(s)	372, 522, 574, 734, 735, 1267, 1268
StyI	CCWWGG	4 cut(s)	407, 761, 862, 1029
TaaI	ACNGT	3 cut(s)	685, 786, 1162
TaqI	TCGA	2 cut(s)	988, 1277
TasI	AATT	9 cut(s)	71, 104, 112, 443, 549, 644, 779, 802, 1228
TatI	WGTACW	2 cut(s)	266, 1162
TfiI	GAWTC	2 cut(s)	295, 1259
Tru1I	TTAA	4 cut(s)	584, 1022, 1191, 1251
Tru9I	TTAA	4 cut(s)	584, 1022, 1191, 1251
TscAI	CASTG	3 cut(s)	87, 688, 1095
TseFI	GTSAC	4 cut(s)	47, 319, 679, 1096
Tsp45I	GTSAC	4 cut(s)	47, 319, 679, 1096
TspDTI	ATGAA	3 cut(s)	147, 161, 249
TspMI	CCCGGG	2 cut(s)	735, 1268
TspRI	CASTG	3 cut(s)	87, 688, 1095
Van91I	CCANNNNNTGG	1 cut(s)	408
VpaK11BI	GGWCC	1 cut(s)	731
XapI	RAATTY	5 cut(s)	71, 104, 112, 644, 1228
XmaI	CCCGGG	2 cut(s)	735, 1268
XmnI	GAANNNNTTC	1 cut(s)	1263
XspI	CTAG	5 cut(s)	162, 638, 947, 1101, 1348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.