Rhodanese-like domain-containing protein 4 chloroplastic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G01050 AT4G01050 |
| fragaria_vesca | FvH4_7g16190 |
| malus_domestica | MD01G1078500.v1.1 MD07G1147500.v1.1 |
| prunus_persica | Prupe.2G185500_v2.0.a1 Prupe.2G185500_v2.0.a1 |
| pyrus_communis | pycom01g10700 pycom07g14660 |
| rosa_chinensis | RchiOBHm_Chr1g0359191 |
| rosa_laevigata | RLG00000027894 |
| rosa_multiflora | Rmu_co8334595.1_g000001 Rmu_sc0038613.1_g000001 Rmu_ssc0000135.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00297260 |
| rosa_rugosa | Rorug01G0268300 |
| rosa_samantha | Rh1AG282200 Rh1BG248600 Rh1CG266400 Rh1DG277600 |
| rosa_wichuraiana | Rw1G025060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1093 |
| Acc36I | ACCTGC | 1 cut(s) | 1093 |
| AccB1I | GGYRCC | 1 cut(s) | 812 |
| AccIII | TCCGGA | 2 cut(s) | 481, 1270 |
| AciI | CCGC | 7 cut(s) | 156, 321, 338, 458, 509, 720, 840 |
| AclWI | GGATC | 1 cut(s) | 960 |
| AcsI | RAATTY | 3 cut(s) | 95, 611, 1192 |
| AcuI | CTGAAG | 2 cut(s) | 159, 714 |
| AfaI | GTAC | 3 cut(s) | 478, 1128, 1200 |
| AgsI | TTSAA | 9 cut(s) | 13, 118, 184, 386, 553, 568, 574, 664, 1279 |
| AhlI | ACTAGT | 1 cut(s) | 913 |
| AjnI | CCWGG | 1 cut(s) | 1231 |
| AluBI | AGCT | 9 cut(s) | 24, 122, 631, 668, 908, 1015, 1046, 1142, 1169 |
| AluI | AGCT | 9 cut(s) | 24, 122, 631, 668, 908, 1015, 1046, 1142, 1169 |
| Alw21I | GWGCWC | 1 cut(s) | 1017 |
| Alw26I | GTCTC | 3 cut(s) | 243, 360, 825 |
| AlwI | GGATC | 1 cut(s) | 960 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 364, 1061, 1142 |
| Aor13HI | TCCGGA | 2 cut(s) | 481, 1270 |
| AoxI | GGCC | 2 cut(s) | 6, 423 |
| ApeKI | GCWGC | 8 cut(s) | 17, 163, 668, 842, 908, 1112, 1166, 1306 |
| ApoI | RAATTY | 3 cut(s) | 95, 611, 1192 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1227 |
| AspS9I | GGNCC | 1 cut(s) | 698 |
| AsuC2I | CCSGG | 3 cut(s) | 190, 543, 1184 |
| AsuHPI | GGTGA | 4 cut(s) | 62, 428, 542, 724 |
| AsuII | TTCGAA | 1 cut(s) | 1241 |
| AvaII | GGWCC | 1 cut(s) | 698 |
| AxyI | CCTNAGG | 1 cut(s) | 1008 |
| BanI | GGYRCC | 1 cut(s) | 812 |
| BanII | GRGCYC | 1 cut(s) | 1017 |
| BauI | CACGAG | 1 cut(s) | 702 |
| BbsI | GAAGAC | 2 cut(s) | 126, 716 |
| Bbv12I | GWGCWC | 1 cut(s) | 1017 |
| BbvCI | CCTCAGC | 1 cut(s) | 948 |
| BbvI | GCAGC | 7 cut(s) | 29, 150, 655, 854, 895, 1099, 1178 |
| BccI | CCATC | 4 cut(s) | 76, 611, 680, 702 |
| BceAI | ACGGC | 2 cut(s) | 169, 358 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 617, 651 |
| BciT130I | CCWGG | 1 cut(s) | 1233 |
| BcnI | CCSGG | 3 cut(s) | 190, 543, 1184 |
| BcoDI | GTCTC | 3 cut(s) | 243, 360, 825 |
| BcuI | ACTAGT | 1 cut(s) | 913 |
| BfaI | CTAG | 3 cut(s) | 914, 1116, 1312 |
| BfmI | CTRYAG | 3 cut(s) | 306, 1086, 1170 |
| BfuAI | ACCTGC | 1 cut(s) | 1093 |
| BlpI | GCTNAGC | 1 cut(s) | 904 |
| Bme1390I | CCNGG | 4 cut(s) | 190, 543, 1184, 1233 |
| Bme18I | GGWCC | 1 cut(s) | 698 |
| BmgT120I | GGNCC | 1 cut(s) | 698 |
| BmiI | GGNNCC | 4 cut(s) | 342, 579, 814, 1188 |
| BmrFI | CCNGG | 4 cut(s) | 190, 543, 1184, 1233 |
| BmsI | GCATC | 2 cut(s) | 769, 1298 |
| BpiI | GAAGAC | 2 cut(s) | 126, 716 |
| BpmI | CTGGAG | 1 cut(s) | 1083 |
| Bpu10I | CCTNAGC | 2 cut(s) | 369, 948 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 904 |
| Bpu14I | TTCGAA | 1 cut(s) | 1241 |
| BpuMI | CCSGG | 3 cut(s) | 190, 543, 1184 |
| BsaJI | CCNNGG | 6 cut(s) | 151, 198, 728, 829, 1182, 1232 |
| BsaWI | WCCGGW | 3 cut(s) | 481, 848, 1270 |
| Bse1I | ACTGG | 1 cut(s) | 1055 |
| Bse21I | CCTNAGG | 1 cut(s) | 1008 |
| BseAI | TCCGGA | 2 cut(s) | 481, 1270 |
| BseBI | CCWGG | 1 cut(s) | 1233 |
| BseDI | CCNNGG | 6 cut(s) | 151, 198, 728, 829, 1182, 1232 |
| BseGI | GGATG | 3 cut(s) | 490, 600, 713 |
| BseMII | CTCAG | 6 cut(s) | 371, 446, 743, 822, 918, 939 |
| BseNI | ACTGG | 1 cut(s) | 1055 |
| BseRI | GAGGAG | 1 cut(s) | 434 |
| BseXI | GCAGC | 7 cut(s) | 29, 150, 655, 854, 895, 1099, 1178 |
| BsgI | GTGCAG | 3 cut(s) | 813, 894, 1065 |
| BshFI | GGCC | 2 cut(s) | 8, 425 |
| BshNI | GGYRCC | 1 cut(s) | 812 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1017 |
| BsiSI | CCGG | 7 cut(s) | 189, 482, 542, 849, 1184, 1271, 1286 |
| BslFI | GGGAC | 1 cut(s) | 1054 |
| BsmAI | GTCTC | 3 cut(s) | 243, 360, 825 |
| BsmFI | GGGAC | 1 cut(s) | 1054 |
| BsnI | GGCC | 2 cut(s) | 8, 425 |
| Bsp119I | TTCGAA | 1 cut(s) | 1241 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1017 |
| Bsp13I | TCCGGA | 2 cut(s) | 481, 1270 |
| Bsp1407I | TGTACA | 1 cut(s) | 1126 |
| Bsp143I | GATC | 3 cut(s) | 38, 449, 952 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 904 |
| BspACI | CCGC | 7 cut(s) | 156, 321, 338, 458, 509, 720, 840 |
| BspANI | GGCC | 2 cut(s) | 8, 425 |
| BspCNI | CTCAG | 6 cut(s) | 370, 445, 744, 821, 917, 940 |
| BspEI | TCCGGA | 2 cut(s) | 481, 1270 |
| BspLI | GGNNCC | 4 cut(s) | 342, 579, 814, 1188 |
| BspMAI | CTGCAG | 2 cut(s) | 310, 1090 |
| BspMI | ACCTGC | 1 cut(s) | 1093 |
| BspPI | GGATC | 1 cut(s) | 960 |
| BspQI | GCTCTTC | 2 cut(s) | 1053, 1080 |
| BspT104I | TTCGAA | 1 cut(s) | 1241 |
| BspT107I | GGYRCC | 1 cut(s) | 812 |
| BsrGI | TGTACA | 1 cut(s) | 1126 |
| BsrI | ACTGG | 1 cut(s) | 1055 |
| BssECI | CCNNGG | 6 cut(s) | 151, 198, 728, 829, 1182, 1232 |
| BssMI | GATC | 3 cut(s) | 38, 449, 952 |
| BssSI | CACGAG | 1 cut(s) | 702 |
| BssT1I | CCWWGG | 3 cut(s) | 198, 728, 829 |
| Bst2BI | CACGAG | 1 cut(s) | 702 |
| Bst2UI | CCWGG | 1 cut(s) | 1233 |
| Bst4CI | ACNGT | 7 cut(s) | 232, 278, 331, 652, 1063, 1126, 1302 |
| Bst6I | CTCTTC | 2 cut(s) | 1053, 1080 |
| BstAUI | TGTACA | 1 cut(s) | 1126 |
| BstBI | TTCGAA | 1 cut(s) | 1241 |
| BstC8I | GCNNGC | 5 cut(s) | 22, 161, 319, 456, 928 |
| BstDEI | CTNAG | 8 cut(s) | 357, 369, 432, 752, 808, 904, 948, 1008 |
| BstDSI | CCRYGG | 1 cut(s) | 151 |
| BstF5I | GGATG | 3 cut(s) | 490, 600, 713 |
| BstKTI | GATC | 3 cut(s) | 41, 452, 955 |
| BstMAI | GTCTC | 3 cut(s) | 243, 360, 825 |
| BstMBI | GATC | 3 cut(s) | 38, 449, 952 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 14, 194, 314, 398, 674, 1079, 1175 |
| BstNI | CCWGG | 1 cut(s) | 1233 |
| BstSCI | CCNGG | 4 cut(s) | 188, 541, 1182, 1231 |
| BstSFI | CTRYAG | 3 cut(s) | 306, 1086, 1170 |
| BstV1I | GCAGC | 7 cut(s) | 29, 150, 655, 854, 895, 1099, 1178 |
| BstV2I | GAAGAC | 2 cut(s) | 126, 716 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 708 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1008 |
| BsuRI | GGCC | 2 cut(s) | 8, 425 |
| BtgI | CCRYGG | 1 cut(s) | 151 |
| BtsCI | GGATG | 3 cut(s) | 490, 600, 713 |
| BtsI | GCAGTG | 1 cut(s) | 71 |
| BtsIMutI | CAGTG | 4 cut(s) | 71, 283, 648, 749 |
| BveI | ACCTGC | 1 cut(s) | 1093 |
| Cac8I | GCNNGC | 5 cut(s) | 22, 161, 319, 456, 928 |
| CaiI | CAGNNNCTG | 3 cut(s) | 364, 1061, 1142 |
| Cfr13I | GGNCC | 1 cut(s) | 698 |
| Csp6I | GTAC | 3 cut(s) | 477, 1127, 1199 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 982, 1017 |
| CviQI | GTAC | 3 cut(s) | 477, 1127, 1199 |
| DdeI | CTNAG | 8 cut(s) | 357, 369, 432, 752, 808, 904, 948, 1008 |
| DpnI | GATC | 3 cut(s) | 40, 451, 954 |
| DpnII | GATC | 3 cut(s) | 38, 449, 952 |
| Eam1104I | CTCTTC | 2 cut(s) | 1053, 1080 |
| EarI | CTCTTC | 2 cut(s) | 1053, 1080 |
| Ecl136II | GAGCTC | 1 cut(s) | 1015 |
| Eco130I | CCWWGG | 3 cut(s) | 198, 728, 829 |
| Eco147I | AGGCCT | 1 cut(s) | 8 |
| Eco24I | GRGCYC | 1 cut(s) | 1017 |
| Eco47I | GGWCC | 1 cut(s) | 698 |
| Eco53kI | GAGCTC | 1 cut(s) | 1015 |
| Eco57I | CTGAAG | 2 cut(s) | 159, 714 |
| Eco81I | CCTNAGG | 1 cut(s) | 1008 |
| EcoICRI | GAGCTC | 1 cut(s) | 1015 |
| EcoRII | CCWGG | 1 cut(s) | 1231 |
| EcoT14I | CCWWGG | 3 cut(s) | 198, 728, 829 |
| EcoT38I | GRGCYC | 1 cut(s) | 1017 |
| ErhI | CCWWGG | 3 cut(s) | 198, 728, 829 |
| FaiI | YATR | 7 cut(s) | 35, 211, 213, 405, 446, 675, 1028 |
| FaqI | GGGAC | 1 cut(s) | 1054 |
| FauNDI | CATATG | 1 cut(s) | 211 |
| FokI | GGATG | 3 cut(s) | 497, 587, 720 |
| FriOI | GRGCYC | 1 cut(s) | 1017 |
| FspBI | CTAG | 3 cut(s) | 914, 1116, 1312 |
| GsuI | CTGGAG | 1 cut(s) | 1083 |
| HaeIII | GGCC | 2 cut(s) | 8, 425 |
| HapII | CCGG | 7 cut(s) | 189, 482, 542, 849, 1184, 1271, 1286 |
| HindIII | AAGCTT | 2 cut(s) | 22, 120 |
| HinfI | GANTC | 5 cut(s) | 131, 349, 386, 806, 1223 |
| HpaII | CCGG | 7 cut(s) | 189, 482, 542, 849, 1184, 1271, 1286 |
| HphI | GGTGA | 4 cut(s) | 62, 428, 542, 724 |
| Hpy166II | GTNNAC | 2 cut(s) | 523, 715 |
| Hpy188I | TCNGA | 2 cut(s) | 144, 628 |
| Hpy188III | TCNNGA | 6 cut(s) | 272, 482, 550, 988, 1100, 1271 |
| Hpy8I | GTNNAC | 2 cut(s) | 523, 715 |
| Hpy99I | CGWCG | 2 cut(s) | 1022, 1306 |
| HpyAV | CCTTC | 6 cut(s) | 19, 87, 98, 499, 689, 991 |
| HpyCH4III | ACNGT | 7 cut(s) | 232, 278, 331, 652, 1063, 1126, 1302 |
| HpyCH4V | TGCA | 7 cut(s) | 17, 308, 638, 794, 911, 1082, 1088 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 14, 194, 314, 398, 674, 1079, 1175 |
| HpyF3I | CTNAG | 8 cut(s) | 357, 369, 432, 752, 808, 904, 948, 1008 |
| Kpn2I | TCCGGA | 2 cut(s) | 481, 1270 |
| Kzo9I | GATC | 3 cut(s) | 38, 449, 952 |
| LguI | GCTCTTC | 2 cut(s) | 1053, 1080 |
| LmnI | GCTCC | 2 cut(s) | 577, 1012 |
| Lsp1109I | GCAGC | 7 cut(s) | 29, 150, 655, 854, 895, 1099, 1178 |
| LweI | GCATC | 2 cut(s) | 769, 1298 |
| MaeI | CTAG | 3 cut(s) | 914, 1116, 1312 |
| MaeIII | GTNAC | 4 cut(s) | 50, 292, 646, 1057 |
| MalI | GATC | 3 cut(s) | 40, 451, 954 |
| MboI | GATC | 3 cut(s) | 38, 449, 952 |
| MboII | GAAGA | 9 cut(s) | 69, 126, 165, 514, 545, 565, 716, 1040, 1067 |
| MhlI | GDGCHC | 1 cut(s) | 1017 |
| MluCI | AATT | 8 cut(s) | 95, 410, 611, 641, 769, 875, 1035, 1192 |
| MlyI | GAGTC | 2 cut(s) | 140, 800 |
| MmeI | TCCRAC | 1 cut(s) | 778 |
| MnlI | CCTC | 9 cut(s) | 236, 412, 415, 614, 698, 796, 899, 943, 1293 |
| MroI | TCCGGA | 2 cut(s) | 481, 1270 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1227 |
| MseI | TTAA | 4 cut(s) | 681, 773, 786, 1215 |
| MslI | CAYNNNNRTG | 1 cut(s) | 706 |
| MspA1I | CMGCKG | 3 cut(s) | 458, 720, 908 |
| MspI | CCGG | 7 cut(s) | 189, 482, 542, 849, 1184, 1271, 1286 |
| MspR9I | CCNGG | 4 cut(s) | 190, 543, 1184, 1233 |
| MvaI | CCWGG | 1 cut(s) | 1233 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 14, 194, 314, 398, 674, 1079, 1175 |
| NciI | CCSGG | 3 cut(s) | 190, 543, 1184 |
| NdeI | CATATG | 1 cut(s) | 211 |
| NdeII | GATC | 3 cut(s) | 38, 449, 952 |
| NlaIV | GGNNCC | 4 cut(s) | 342, 579, 814, 1188 |
| NmuCI | GTSAC | 3 cut(s) | 50, 292, 646 |
| NspV | TTCGAA | 1 cut(s) | 1241 |
| PaqCI | CACCTGC | 1 cut(s) | 1093 |
| PceI | AGGCCT | 1 cut(s) | 8 |
| PciSI | GCTCTTC | 2 cut(s) | 1053, 1080 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1227 |
| PfeI | GAWTC | 3 cut(s) | 349, 386, 1223 |
| PleI | GAGTC | 2 cut(s) | 139, 800 |
| PpsI | GAGTC | 2 cut(s) | 139, 800 |
| Psp124BI | GAGCTC | 1 cut(s) | 1017 |
| Psp6I | CCWGG | 1 cut(s) | 1231 |
| PspGI | CCWGG | 1 cut(s) | 1231 |
| PspN4I | GGNNCC | 4 cut(s) | 342, 579, 814, 1188 |
| PspPI | GGNCC | 1 cut(s) | 698 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 252, 284 |
| PstI | CTGCAG | 2 cut(s) | 310, 1090 |
| PstNI | CAGNNNCTG | 3 cut(s) | 364, 1061, 1142 |
| PvuII | CAGCTG | 1 cut(s) | 908 |
| RsaI | GTAC | 3 cut(s) | 478, 1128, 1200 |
| RsaNI | GTAC | 3 cut(s) | 477, 1127, 1199 |
| RseI | CAYNNNNRTG | 1 cut(s) | 706 |
| SacI | GAGCTC | 1 cut(s) | 1017 |
| SapI | GCTCTTC | 2 cut(s) | 1053, 1080 |
| SaqAI | TTAA | 4 cut(s) | 681, 773, 786, 1215 |
| Sau3AI | GATC | 3 cut(s) | 38, 449, 952 |
| Sau96I | GGNCC | 1 cut(s) | 698 |
| SchI | GAGTC | 2 cut(s) | 140, 800 |
| ScrFI | CCNGG | 4 cut(s) | 190, 543, 1184, 1233 |
| SduI | GDGCHC | 1 cut(s) | 1017 |
| SfaNI | GCATC | 2 cut(s) | 769, 1298 |
| SfcI | CTRYAG | 3 cut(s) | 306, 1086, 1170 |
| SfuI | TTCGAA | 1 cut(s) | 1241 |
| SinI | GGWCC | 1 cut(s) | 698 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 706 |
| SpeI | ACTAGT | 1 cut(s) | 913 |
| Sse9I | AATT | 8 cut(s) | 95, 410, 611, 641, 769, 875, 1035, 1192 |
| SseBI | AGGCCT | 1 cut(s) | 8 |
| SsiI | CCGC | 7 cut(s) | 156, 321, 338, 458, 509, 720, 840 |
| SspMI | CTAG | 3 cut(s) | 914, 1116, 1312 |
| SstI | GAGCTC | 1 cut(s) | 1017 |
| StuI | AGGCCT | 1 cut(s) | 8 |
| StyD4I | CCNGG | 4 cut(s) | 188, 541, 1182, 1231 |
| StyI | CCWWGG | 3 cut(s) | 198, 728, 829 |
| TaaI | ACNGT | 7 cut(s) | 232, 278, 331, 652, 1063, 1126, 1302 |
| TaqI | TCGA | 6 cut(s) | 515, 606, 955, 1020, 1149, 1241 |
| TasI | AATT | 8 cut(s) | 95, 410, 611, 641, 769, 875, 1035, 1192 |
| TatI | WGTACW | 1 cut(s) | 1126 |
| TauI | GCSGC | 2 cut(s) | 159, 842 |
| TfiI | GAWTC | 3 cut(s) | 349, 386, 1223 |
| Tru1I | TTAA | 4 cut(s) | 681, 773, 786, 1215 |
| Tru9I | TTAA | 4 cut(s) | 681, 773, 786, 1215 |
| TscAI | CASTG | 4 cut(s) | 78, 283, 655, 756 |
| TseFI | GTSAC | 3 cut(s) | 50, 292, 646 |
| TseI | GCWGC | 8 cut(s) | 17, 163, 668, 842, 908, 1112, 1166, 1306 |
| Tsp45I | GTSAC | 3 cut(s) | 50, 292, 646 |
| TspDTI | ATGAA | 3 cut(s) | 126, 228, 589 |
| TspRI | CASTG | 4 cut(s) | 78, 283, 655, 756 |
| VpaK11BI | GGWCC | 1 cut(s) | 698 |
| XapI | RAATTY | 3 cut(s) | 95, 611, 1192 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1227 |
| XspI | CTAG | 3 cut(s) | 914, 1116, 1312 |