MD07G1176800.v1.1
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0005694
Physical Location & Seq
Forward (+)
25618059 .. 25622011
3953 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1176800.v1.1.491

Sequence Viewer

Length: 2259 bp
ATGCCGCCAGAACCATTGCCTTGGGATCGGAAAGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAGTCCCTTGGCTCTGTGGCACGATGGAGGGACTCGCCCCATCATGCACCTCGCGACTTCAATCGTTGGGCTTCCGGCGATTTTCGCAGACCACCAGGTCATGGTAAGCAGGGTGGTTGGCACGTGTTCTCCGATGATTCTGGTCATGGGTATGGATCGTCTCGGTCAGGCGATAAGATGGTGGAAGATGAGAGCTTCCGGCCATCATTTTCACGAGGAGATGGAAGGTATGGCAGGAACAGTAGGGATAATAGAGGGCCACCTTATAGCCAGAGGGAAAGTAAAGGCTATTCTTGGGAAACCAGAAGTGGGTCTCCAAACATGCCCGGGAGGCCAAATCGTGTGAATAATGAACAGAGGTCGCAGGATGATATGCTGACATACTCATCTCATCAACAGTCTGACTTTGGAAGCACATGGGATCAGATTCAATTGAAAGACCAGCTTGATAAAATGGGTGGTTCCACTGGTTTAGGCTCTGGCCAGAAATGTGAGAGAGAGAACTCATTGGTCTCAATTGATTGGAAGCCTCTAAAATGGACGCGGTCTGGAAGCATGTCTTCTCGGGGTTCGGGTTTCAGCCATTCAAGTAGCTCAAAGAGCATGGGGCCCATTGATTCCAATGAAGCAAAGGTTGAGTCACAGCCGAAAACAGCCACTCCAGTGCAGTCTCCTTCGGGAGAAGCTACTAATTGTGTAACATCTGCTGCACCTTTAGAGGAAACAACTTCGAGGAAGAAGCCGCGCCTTGGATGGGGCGAGGGTTTGGCAAAGTATGAGAAAAAGAAAGTCGACGTCCCTGATGGTAGCATGAACAAAGATGCGGCTGTCTGTTCTGTTGGTAACACTGAACCAGCCCATTCTCTGAGTTCAAGCTTGCCTGATAAAAGCCCCCGAGTCACAGTTTTCTCAGATTGTGCATCTCCTGCAACTCCATCCTCTGTTGCTTGCAGTTCTTCTCCAGGTGTGGAGGAGAAATCATTTTGCAAGGCAGTTAATGTTGAGAACGATACTAGAAACTTTTGTGGTTCCCCAGGTCCTATGTCTCAGATTCATCACGAGGGATTCTCATTCCAATTGGAAAAGTTGGATGGTAATTCTTTAGTTAACATGGACTCATCAATACTTGAATTGCTTCAGTCTGATGATCCAAGTTCAGTGGATTCCAGTATCCCGAGGCCGACTGCATTGAACAAGTTGCTTATATGGAAAGGTGAAATTTCAAAGGTATTGGAGGTAACTGAGTCAGAAATTGATTCACTCGAAAACGAACTTAAGGCACTGAAATCTGATTCTGGGGGCAGCTGTCCCCATCCAGCAACTTCTAGTTCTTTGCCTGTGGAGGAGAAGGATAAATCTTGCAAAGAACAGGTCACAAATTTGATCACTTGGCCTTCTCCATTGCAAATTCATTCTTCTGGGGACACTAATGTGCAGAAGATGTGTGTTGATAATGGTGACCAGGTAGAATTTTGTGGTATTGTTAAGGATGAGGATATTGATAGTCCTGGAACAGCGACATCGAAATTTGTTGAATCATTACCTTTGGTTTCATCTGATATGACGAATAAAACTGGTGGTTCTGAGGATCGGGATCCAATCCAAACAACCAAAGGAGAAGAAACGTGCTTAGTGCCCAGCAGATATGCAGAAAAGACTGACCCATCTACTTGTGGTAATAGTAGCATGCTTTTGGATAGTGAGGTAGTTGCACCGGACTCTGGTGTAGTAGTAGATAAGTTATGCGATTCTATATTTTCTGCCAATAAAATATTTGCAAGTAGAGCATCTGACATATTTAGTAAGCTGTTATCAAAAGAGCATATTTCTGGAGTTAGTGTTTCCTCATCCTGGAAGAATGATTCATTGATCAAAGAGAAGTTTGCCAAGAGGAAGCGACATTTAAGGTTTATGGAGAGAGTTATAACCTTAAAATTTAAAGCCTTTCAACACTTGTGGAAGGAAGACATGAGTGTGCTTTCCATGCGAAAATATCGTTCAAAATCTCACAAAAAATTTGAGTTAAGCTTGCGAGCAACTAATAATGGACATCAGAAGCATCGCTCTTCAATTCGATCGCGATTTTCTACACCTGTGGTTACTTGGAGTTGTTTTGTTGCATGCTTTTTAGATAACTACTCATTGGTTATTTTATATTTGATCAACTATAGAAGTCTATGTGTAAATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0000226 GO:0000228 GO:0000785 GO:0000790 GO:0000981 GO:0001067 GO:0001085 GO:0001102 GO:0001932 GO:0001933 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003714 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005874 GO:0005876 GO:0006109 GO:0006110 GO:0006139 GO:0006140 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009966 GO:0009968 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010563 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010648 GO:0015630 GO:0016043 GO:0016070 GO:0016922 GO:0017053 GO:0018130 GO:0019216 GO:0019219 GO:0019220 GO:0019222 GO:0019438 GO:0019899 GO:0022402 GO:0022607 GO:0023051 GO:0023057 GO:0030808 GO:0030811 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032368 GO:0032774 GO:0032872 GO:0032873 GO:0032879 GO:0032890 GO:0032991 GO:0033613 GO:0034641 GO:0034645 GO:0034654 GO:0035257 GO:0042325 GO:0042326 GO:0042826 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043269 GO:0043408 GO:0043409 GO:0043467 GO:0043470 GO:0044070 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045892 GO:0045934 GO:0045936 GO:0046328 GO:0046329 GO:0046483 GO:0046966 GO:0048511 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051049 GO:0051171 GO:0051172 GO:0051174 GO:0051193 GO:0051196 GO:0051225 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051427 GO:0060147 GO:0060149 GO:0060255 GO:0060964 GO:0060965 GO:0060966 GO:0060967 GO:0060968 GO:0060969 GO:0062012 GO:0065007 GO:0070013 GO:0070302 GO:0070303 GO:0070920 GO:0070925 GO:0071704 GO:0071840 GO:0072361 GO:0072362 GO:0072367 GO:0072368 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0097659 GO:0098679 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1900371 GO:1900402 GO:1900542 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902531 GO:1902532 GO:1902679 GO:1903506 GO:1903507 GO:1903578 GO:1903798 GO:1903799 GO:1905952 GO:2000112 GO:2000113 GO:2000191 GO:2001141 GO:2001169
KEGG Pathways
Metabolic & Signaling
ko01522 ko04919 ko05202 map01522 map04919 map05202
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

753

Amino Acids

83.05

Weight (kDa)

7.54

Isoelectric Point (pI)

54.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1991
AasI GACNNNNNNGTC 1 cut(s) 162
AatII GACGTC 1 cut(s) 864
AccB7I CCANNNNNTGG 1 cut(s) 167
AccI GTMKAC 1 cut(s) 858
AccII CGCG 4 cut(s) 120, 610, 811, 2146
AciI CCGC 4 cut(s) 5, 610, 809, 890
AclWI GGATC 7 cut(s) 33, 229, 495, 1208, 1655, 1662, 1668
AcoI YGGCCR 2 cut(s) 266, 547
AcsI RAATTY 7 cut(s) 1284, 1444, 1473, 1535, 1592, 2000, 2081
AcuI CTGAAG 1 cut(s) 1187
AcvI CACGTG 1 cut(s) 190
AcyI GRCGYC 1 cut(s) 861
AfiI CCNNNNNNNGG 6 cut(s) 167, 375, 815, 820, 1787, 1917
AflII CTTAAG 1 cut(s) 1340
AflIII ACRYGT 1 cut(s) 189
AjnI CCWGG 6 cut(s) 160, 1027, 1099, 1527, 1573, 1916
AleI CACNNNNGTG 2 cut(s) 728, 1496
AluBI AGCT 8 cut(s) 261, 511, 660, 752, 942, 1371, 1873, 2094
AluI AGCT 8 cut(s) 261, 511, 660, 752, 942, 1371, 1873, 2094
Alw26I GTCTC 5 cut(s) 231, 384, 583, 741, 1116
AlwI GGATC 7 cut(s) 33, 229, 495, 1208, 1655, 1662, 1668
Ama87I CYCGRG 4 cut(s) 392, 630, 960, 1240
AoxI GGCC 7 cut(s) 266, 323, 398, 547, 674, 1244, 1457
ApaI GGGCCC 1 cut(s) 678
ApeKI GCWGC 2 cut(s) 773, 1368
ApoI RAATTY 7 cut(s) 1284, 1444, 1473, 1535, 1592, 2000, 2081
ArsI GACNNNNNNTTYG 4 cut(s) 689, 721, 1422, 1454
Asp700I GAANNNNTTC 2 cut(s) 35, 1200
AspLEI GCGC 1 cut(s) 813
AspS9I GGNCC 4 cut(s) 323, 674, 675, 1103
AsuC2I CCSGG 2 cut(s) 393, 394
AsuHPI GGTGA 2 cut(s) 1292, 1535
AvaI CYCGRG 4 cut(s) 392, 630, 960, 1240
AvaII GGWCC 1 cut(s) 1103
BaeGI GKGCMC 2 cut(s) 678, 1704
BalI TGGCCA 1 cut(s) 549
BamHI GGATCC 1 cut(s) 1660
BanII GRGCYC 1 cut(s) 678
BauI CACGAG 3 cut(s) 56, 279, 1124
BbrPI CACGTG 1 cut(s) 190
BbsI GAAGAC 2 cut(s) 618, 2037
BbvI GCAGC 2 cut(s) 760, 1380
BciT130I CCWGG 6 cut(s) 162, 1029, 1101, 1529, 1575, 1918
BciVI GTATCC 1 cut(s) 1247
BclI TGATCA 3 cut(s) 1449, 1935, 2226
BcnI CCSGG 2 cut(s) 393, 394
BcoDI GTCTC 5 cut(s) 231, 384, 583, 741, 1116
BfaI CTAG 2 cut(s) 1080, 1392
BfmI CTRYAG 1 cut(s) 2233
BfrI CTTAAG 1 cut(s) 1340
BfuI GTATCC 1 cut(s) 1247
BglI GCCNNNNNGGC 1 cut(s) 397
BisI GCNGC 5 cut(s) 5, 774, 809, 891, 1369
BlsI GCNGC 5 cut(s) 6, 775, 810, 892, 1370
Bme1390I CCNGG 8 cut(s) 162, 393, 394, 1029, 1101, 1529, 1575, 1918
Bme18I GGWCC 1 cut(s) 1103
BmeT110I CYCGRG 4 cut(s) 392, 630, 960, 1240
BmgT120I GGNCC 4 cut(s) 323, 674, 675, 1103
BmiI GGNNCC 5 cut(s) 529, 675, 676, 1096, 1662
BmrFI CCNGG 8 cut(s) 162, 393, 394, 1029, 1101, 1529, 1575, 1918
BmsI GCATC 4 cut(s) 877, 995, 1862, 2134
BpiI GAAGAC 2 cut(s) 618, 2037
BplI GAGNNNNNCTC 2 cut(s) 1118, 1150
BpmI CTGGAG 3 cut(s) 711, 1011, 1917
BpuMI CCSGG 2 cut(s) 393, 394
BsaAI YACGTR 1 cut(s) 190
BsaBI GATNNNNATC 1 cut(s) 1659
BsaHI GRCGYC 1 cut(s) 861
BsaI GGTCTC 2 cut(s) 384, 583
BsaJI CCNNGG 6 cut(s) 20, 73, 392, 814, 1099, 1241
BsaWI WCCGGW 1 cut(s) 1780
BsaXI ACNNNNNCTCC 6 cut(s) 179, 209, 709, 739, 1890, 1920
Bsc4I CCNNNNNNNGG 6 cut(s) 167, 375, 815, 820, 1787, 1917
Bse1I ACTGG 4 cut(s) 538, 728, 1233, 1645
Bse3DI GCAATG 2 cut(s) 14, 1466
Bse8I GATNNNNATC 1 cut(s) 1659
BseBI CCWGG 6 cut(s) 162, 1029, 1101, 1529, 1575, 1918
BseDI CCNNGG 6 cut(s) 20, 73, 392, 814, 1099, 1241
BseGI GGATG 7 cut(s) 439, 824, 1001, 1162, 1378, 1561, 1913
BseJI GATNNNNATC 1 cut(s) 1659
BseLI CCNNNNNNNGG 6 cut(s) 167, 375, 815, 820, 1787, 1917
BseMI GCAATG 2 cut(s) 14, 1466
BseMII CTCAG 5 cut(s) 923, 990, 1127, 1299, 1641
BseNI ACTGG 4 cut(s) 538, 728, 1233, 1645
BseRI GAGGAG 3 cut(s) 297, 1052, 1424
BseSI GKGCMC 2 cut(s) 678, 1704
BseXI GCAGC 2 cut(s) 760, 1380
BseYI CCCAGC 1 cut(s) 1703
BsgI GTGCAG 3 cut(s) 752, 759, 1520
Bsh1236I CGCG 4 cut(s) 120, 610, 811, 2146
Bsh1285I CGRYCG 1 cut(s) 2144
BshFI GGCC 7 cut(s) 268, 325, 400, 549, 676, 1246, 1459
BsiEI CGRYCG 1 cut(s) 2144
BsiHKCI CYCGRG 4 cut(s) 392, 630, 960, 1240
BsiSI CCGG 4 cut(s) 141, 265, 393, 1781
BslFI GGGAC 5 cut(s) 55, 110, 848, 1359, 1502
BslI CCNNNNNNNGG 6 cut(s) 167, 375, 815, 820, 1787, 1917
BsmAI GTCTC 5 cut(s) 231, 384, 583, 741, 1116
BsmBI CGTCTC 1 cut(s) 231
BsmFI GGGAC 5 cut(s) 55, 110, 848, 1359, 1502
BsnI GGCC 7 cut(s) 268, 325, 400, 549, 676, 1246, 1459
Bso31I GGTCTC 2 cut(s) 384, 583
BsoBI CYCGRG 4 cut(s) 392, 630, 960, 1240
Bsp120I GGGCCC 1 cut(s) 674
Bsp1286I GDGCHC 2 cut(s) 678, 1704
Bsp68I TCGCGA 2 cut(s) 120, 2146
BspACI CCGC 4 cut(s) 5, 610, 809, 890
BspANI GGCC 7 cut(s) 268, 325, 400, 549, 676, 1246, 1459
BspCNI CTCAG 5 cut(s) 924, 989, 1126, 1300, 1642
BspFNI CGCG 4 cut(s) 120, 610, 811, 2146
BspLI GGNNCC 5 cut(s) 529, 675, 676, 1096, 1662
BspPI GGATC 7 cut(s) 33, 229, 495, 1208, 1655, 1662, 1668
BspQI GCTCTTC 1 cut(s) 2137
BspTI CTTAAG 1 cut(s) 1340
BspTNI GGTCTC 2 cut(s) 384, 583
BsrDI GCAATG 2 cut(s) 14, 1466
BsrI ACTGG 4 cut(s) 538, 728, 1233, 1645
BssECI CCNNGG 6 cut(s) 20, 73, 392, 814, 1099, 1241
BssNI GRCGYC 1 cut(s) 861
BssSI CACGAG 3 cut(s) 56, 279, 1124
BssT1I CCWWGG 3 cut(s) 20, 73, 814
Bst2BI CACGAG 3 cut(s) 56, 279, 1124
Bst2UI CCWGG 6 cut(s) 162, 1029, 1101, 1529, 1575, 1918
Bst4CI ACNGT 3 cut(s) 308, 465, 970
Bst6I CTCTTC 1 cut(s) 2137
BstACI GRCGYC 1 cut(s) 861
BstAFI CTTAAG 1 cut(s) 1340
BstAPI GCANNNNNTGC 1 cut(s) 992
BstBAI YACGTR 1 cut(s) 190
BstC8I GCNNGC 6 cut(s) 944, 1015, 1754, 2096, 2100, 2188
BstDEI CTNAG 6 cut(s) 932, 976, 1113, 1308, 1650, 1696
BstEII GGTNACC 1 cut(s) 1523
BstF5I GGATG 7 cut(s) 439, 824, 1001, 1162, 1378, 1561, 1913
BstFNI CGCG 4 cut(s) 120, 610, 811, 2146
BstHHI GCGC 1 cut(s) 813
BstMAI GTCTC 5 cut(s) 231, 384, 583, 741, 1116
BstMCI CGRYCG 1 cut(s) 2144
BstMWI GCNNNNNNNGC 6 cut(s) 150, 397, 666, 992, 1850, 2050
BstNI CCWGG 6 cut(s) 162, 1029, 1101, 1529, 1575, 1918
BstNSI RCATGY 4 cut(s) 391, 625, 1756, 2190
BstPI GGTNACC 1 cut(s) 1523
BstSCI CCNGG 8 cut(s) 160, 391, 392, 1027, 1099, 1527, 1573, 1916
BstSFI CTRYAG 1 cut(s) 2233
BstSLI GKGCMC 2 cut(s) 678, 1704
BstUI CGCG 4 cut(s) 120, 610, 811, 2146
BstV1I GCAGC 2 cut(s) 760, 1380
BstV2I GAAGAC 2 cut(s) 618, 2037
BstX2I RGATCY 1 cut(s) 1660
BstXI CCANNNNNNTGG 1 cut(s) 21
BstYI RGATCY 1 cut(s) 1660
BsuI GTATCC 1 cut(s) 1247
BsuRI GGCC 7 cut(s) 268, 325, 400, 549, 676, 1246, 1459
BtgZI GCGATG 1 cut(s) 2111
BtsCI GGATG 7 cut(s) 439, 824, 1001, 1162, 1378, 1561, 1913
BtsIMutI CAGTG 5 cut(s) 531, 735, 912, 1230, 1346
BtuMI TCGCGA 2 cut(s) 120, 2146
Cac8I GCNNGC 6 cut(s) 944, 1015, 1754, 2096, 2100, 2188
CfoI GCGC 1 cut(s) 813
Cfr13I GGNCC 4 cut(s) 323, 674, 675, 1103
Cfr9I CCCGGG 1 cut(s) 392
CseI GACGC 1 cut(s) 616
CsiI ACCWGGT 2 cut(s) 160, 1527
CspCI CAANNNNNGTGG 4 cut(s) 1206, 1241, 2003, 2038
DdeI CTNAG 6 cut(s) 932, 976, 1113, 1308, 1650, 1696
DraI TTTAAA 1 cut(s) 2005
DrdI GACNNNNNNGTC 1 cut(s) 162
DseDI GACNNNNNNGTC 1 cut(s) 162
EaeI YGGCCR 2 cut(s) 266, 547
Eam1104I CTCTTC 1 cut(s) 2137
EarI CTCTTC 1 cut(s) 2137
Eco130I CCWWGG 3 cut(s) 20, 73, 814
Eco24I GRGCYC 1 cut(s) 678
Eco31I GGTCTC 2 cut(s) 384, 583
Eco47I GGWCC 1 cut(s) 1103
Eco57I CTGAAG 1 cut(s) 1187
Eco72I CACGTG 1 cut(s) 190
Eco88I CYCGRG 4 cut(s) 392, 630, 960, 1240
Eco91I GGTNACC 1 cut(s) 1523
EcoO109I RGGNCCY 2 cut(s) 674, 1103
EcoO65I GGTNACC 1 cut(s) 1523
EcoRII CCWGG 6 cut(s) 160, 1027, 1099, 1527, 1573, 1916
EcoT14I CCWWGG 3 cut(s) 20, 73, 814
EcoT38I GRGCYC 1 cut(s) 678
ErhI CCWWGG 3 cut(s) 20, 73, 814
Esp3I CGTCTC 1 cut(s) 231
FalI AAGNNNNNCTT 4 cut(s) 495, 527, 610, 642
FaqI GGGAC 5 cut(s) 55, 110, 848, 1359, 1502
FbaI TGATCA 3 cut(s) 1449, 1935, 2226
FblI GTMKAC 1 cut(s) 858
Fnu4HI GCNGC 5 cut(s) 5, 774, 809, 891, 1369
FokI GGATG 7 cut(s) 446, 831, 988, 1169, 1365, 1568, 1900
FriOI GRGCYC 1 cut(s) 678
Fsp4HI GCNGC 5 cut(s) 5, 774, 809, 891, 1369
FspBI CTAG 2 cut(s) 1080, 1392
GlaI GCGC 1 cut(s) 812
GluI GCNGC 5 cut(s) 5, 774, 809, 891, 1369
GsaI CCCAGC 1 cut(s) 1707
GsuI CTGGAG 3 cut(s) 711, 1011, 1917
HaeIII GGCC 7 cut(s) 268, 325, 400, 549, 676, 1246, 1459
HapII CCGG 4 cut(s) 141, 265, 393, 1781
HgaI GACGC 1 cut(s) 616
HhaI GCGC 1 cut(s) 813
Hin1I GRCGYC 1 cut(s) 861
Hin6I GCGC 1 cut(s) 811
HinP1I GCGC 1 cut(s) 811
HincII GTYRAC 2 cut(s) 859, 1174
HindII GTYRAC 2 cut(s) 859, 1174
HindIII AAGCTT 2 cut(s) 940, 2092
HpaI GTTAAC 1 cut(s) 1174
HpaII CCGG 4 cut(s) 141, 265, 393, 1781
HphI GGTGA 2 cut(s) 1292, 1535
Hpy166II GTNNAC 2 cut(s) 859, 1174
Hpy188III TCNNGA 9 cut(s) 119, 279, 615, 744, 1124, 1240, 1658, 1896, 2145
Hpy8I GTNNAC 2 cut(s) 859, 1174
Hpy99I CGWCG 1 cut(s) 863
HpyAV CCTTC 5 cut(s) 285, 750, 1408, 1470, 2020
HpyCH4III ACNGT 3 cut(s) 308, 465, 970
HpyCH4IV ACGT 3 cut(s) 189, 861, 1691
HpyF10VI GCNNNNNNNGC 6 cut(s) 150, 397, 666, 992, 1850, 2050
HpyF3I CTNAG 6 cut(s) 932, 976, 1113, 1308, 1650, 1696
HpySE526I ACGT 3 cut(s) 189, 861, 1691
Hsp92I GRCGYC 1 cut(s) 861
HspAI GCGC 1 cut(s) 811
Ksp22I TGATCA 3 cut(s) 1449, 1935, 2226
KspAI GTTAAC 1 cut(s) 1174
LguI GCTCTTC 1 cut(s) 2137
Lsp1109I GCAGC 2 cut(s) 760, 1380
LweI GCATC 4 cut(s) 877, 995, 1862, 2134
MabI ACCWGGT 2 cut(s) 160, 1527
MaeI CTAG 2 cut(s) 1080, 1392
MaeII ACGT 3 cut(s) 189, 861, 1691
MaeIII GTNAC 8 cut(s) 705, 763, 908, 964, 1303, 1438, 1523, 2164
MfeI CAATTG 3 cut(s) 497, 582, 1142
MflI RGATCY 1 cut(s) 1660
MhlI GDGCHC 2 cut(s) 678, 1704
MlsI TGGCCA 1 cut(s) 549
MluNI TGGCCA 1 cut(s) 549
MlyI GAGTC 7 cut(s) 77, 92, 713, 972, 1175, 1319, 1778
MmeI TCCRAC 2 cut(s) 45, 1134
Mox20I TGGCCA 1 cut(s) 549
MroXI GAANNNNTTC 2 cut(s) 35, 1200
MscI TGGCCA 1 cut(s) 549
MseI TTAA 8 cut(s) 1062, 1173, 1341, 1551, 1970, 1997, 2004, 2090
MslI CAYNNNNRTG 4 cut(s) 216, 728, 1496, 2039
Msp20I TGGCCA 1 cut(s) 549
MspA1I CMGCKG 1 cut(s) 1371
MspCI CTTAAG 1 cut(s) 1340
MspI CCGG 4 cut(s) 141, 265, 393, 1781
MspR9I CCNGG 8 cut(s) 162, 393, 394, 1029, 1101, 1529, 1575, 1918
MunI CAATTG 3 cut(s) 497, 582, 1142
MvaI CCWGG 6 cut(s) 162, 1029, 1101, 1529, 1575, 1918
MvnI CGCG 4 cut(s) 120, 610, 811, 2146
MwoI GCNNNNNNNGC 6 cut(s) 150, 397, 666, 992, 1850, 2050
NciI CCSGG 2 cut(s) 393, 394
NlaIV GGNNCC 5 cut(s) 529, 675, 676, 1096, 1662
NmuCI GTSAC 4 cut(s) 705, 964, 1438, 1523
NruI TCGCGA 2 cut(s) 120, 2146
NspI RCATGY 4 cut(s) 391, 625, 1756, 2190
OliI CACNNNNGTG 2 cut(s) 728, 1496
PaeI GCATGC 2 cut(s) 1756, 2190
PciSI GCTCTTC 1 cut(s) 2137
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PdmI GAANNNNTTC 2 cut(s) 35, 1200
PflFI GACNNNGTC 1 cut(s) 610
PflMI CCANNNNNTGG 1 cut(s) 167
PfoI TCCNGGA 2 cut(s) 1573, 1916
PkrI GCNGC 5 cut(s) 6, 775, 810, 892, 1370
Ple19I CGATCG 1 cut(s) 2144
PleI GAGTC 7 cut(s) 76, 92, 712, 971, 1175, 1318, 1778
PmaCI CACGTG 1 cut(s) 190
PmlI CACGTG 1 cut(s) 190
PpsI GAGTC 7 cut(s) 76, 92, 712, 971, 1175, 1318, 1778
Ppu21I YACGTR 1 cut(s) 190
PpuMI RGGWCCY 1 cut(s) 1103
PsiI TTATAA 1 cut(s) 1991
Psp5II RGGWCCY 1 cut(s) 1103
Psp6I CCWGG 6 cut(s) 160, 1027, 1099, 1527, 1573, 1916
PspCI CACGTG 1 cut(s) 190
PspEI GGTNACC 1 cut(s) 1523
PspFI CCCAGC 1 cut(s) 1703
PspGI CCWGG 6 cut(s) 160, 1027, 1099, 1527, 1573, 1916
PspN4I GGNNCC 5 cut(s) 529, 675, 676, 1096, 1662
PspOMI GGGCCC 1 cut(s) 674
PspPI GGNCC 4 cut(s) 323, 674, 675, 1103
PspPPI RGGWCCY 1 cut(s) 1103
PsuI RGATCY 1 cut(s) 1660
PsyI GACNNNGTC 1 cut(s) 610
PvuI CGATCG 1 cut(s) 2144
PvuII CAGCTG 1 cut(s) 1371
RruI TCGCGA 2 cut(s) 120, 2146
RseI CAYNNNNRTG 4 cut(s) 216, 728, 1496, 2039
SalI GTCGAC 1 cut(s) 857
SapI GCTCTTC 1 cut(s) 2137
SaqAI TTAA 8 cut(s) 1062, 1173, 1341, 1551, 1970, 1997, 2004, 2090
SatI GCNGC 5 cut(s) 5, 774, 809, 891, 1369
Sau96I GGNCC 4 cut(s) 323, 674, 675, 1103
SchI GAGTC 7 cut(s) 77, 92, 713, 972, 1175, 1319, 1778
ScrFI CCNGG 8 cut(s) 162, 393, 394, 1029, 1101, 1529, 1575, 1918
SduI GDGCHC 2 cut(s) 678, 1704
SexAI ACCWGGT 2 cut(s) 160, 1527
SfaNI GCATC 4 cut(s) 877, 995, 1862, 2134
SfcI CTRYAG 1 cut(s) 2233
SinI GGWCC 1 cut(s) 1103
SmaI CCCGGG 1 cut(s) 394
SmiMI CAYNNNNRTG 4 cut(s) 216, 728, 1496, 2039
SmlI CTYRAG 1 cut(s) 1340
SmoI CTYRAG 1 cut(s) 1340
SphI GCATGC 2 cut(s) 1756, 2190
SsiI CCGC 4 cut(s) 5, 610, 809, 890
SspI AATATT 1 cut(s) 1839
SspMI CTAG 2 cut(s) 1080, 1392
StyD4I CCNGG 8 cut(s) 160, 391, 392, 1027, 1099, 1527, 1573, 1916
StyI CCWWGG 3 cut(s) 20, 73, 814
TaaI ACNGT 3 cut(s) 308, 465, 970
TaiI ACGT 3 cut(s) 192, 864, 1694
TaqI TCGA 5 cut(s) 797, 858, 1329, 1589, 2140
TaqII GACCGA 1 cut(s) 219
TauI GCSGC 3 cut(s) 7, 811, 893
Tru1I TTAA 8 cut(s) 1062, 1173, 1341, 1551, 1970, 1997, 2004, 2090
Tru9I TTAA 8 cut(s) 1062, 1173, 1341, 1551, 1970, 1997, 2004, 2090
TscAI CASTG 5 cut(s) 538, 735, 919, 1230, 1353
TseFI GTSAC 4 cut(s) 705, 964, 1438, 1523
TseI GCWGC 2 cut(s) 773, 1368
Tsp45I GTSAC 4 cut(s) 705, 964, 1438, 1523
TspDTI ATGAA 7 cut(s) 432, 705, 893, 1109, 1466, 1608, 1920
TspMI CCCGGG 1 cut(s) 392
TspRI CASTG 5 cut(s) 538, 735, 919, 1230, 1353
Tth111I GACNNNGTC 1 cut(s) 610
Van91I CCANNNNNTGG 1 cut(s) 167
Vha464I CTTAAG 1 cut(s) 1340
VpaK11BI GGWCC 1 cut(s) 1103
XapI RAATTY 7 cut(s) 1284, 1444, 1473, 1535, 1592, 2000, 2081
XceI RCATGY 4 cut(s) 391, 625, 1756, 2190
XmaI CCCGGG 1 cut(s) 392
XmiI GTMKAC 1 cut(s) 858
XmnI GAANNNNTTC 2 cut(s) 35, 1200
XspI CTAG 2 cut(s) 1080, 1392
ZraI GACGTC 1 cut(s) 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.