SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52250 AT3G52250 |
| fragaria_vesca | FvH4_7g19850 FvH4_7g19850 FvH4_7g19850 FvH4_7g19850 |
| malus_domestica | MD01G1110800.v1.1 MD07G1176800.v1.1 MD12G1111400.v1.1 MD12G1111500.v1.1 |
| prunus_persica | Prupe.2G215600_v2.0.a1 Prupe.2G215600_v2.0.a1 |
| pyrus_communis | pycom01g13790 pycom01g13800 pycom01g13810 pycom07g17090 |
| rosa_chinensis | RchiOBHm_Chr1g0363841 |
| rosa_laevigata | RLG00000027542 |
| rosa_multiflora | Rmu_sc0002483.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00292930 |
| rosa_rugosa | Rorug01G0309600 Rorug01G0309700 |
| rosa_samantha | Rh1AG318200 Rh1BG281400 Rh1CG297800 Rh1DG312700 Rh4AG037100 |
| rosa_wichuraiana | Rw1G028240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 162 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 167 |
| AccII | CGCG | 1 cut(s) | 120 |
| AciI | CCGC | 2 cut(s) | 5, 158 |
| AclWI | GGATC | 2 cut(s) | 33, 231 |
| AcuI | CTGAAG | 1 cut(s) | 249 |
| AcvI | CACGTG | 1 cut(s) | 283 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 167, 363, 377 |
| AgsI | TTSAA | 2 cut(s) | 43, 127 |
| AjnI | CCWGG | 2 cut(s) | 160, 393 |
| AluBI | AGCT | 1 cut(s) | 263 |
| AluI | AGCT | 1 cut(s) | 263 |
| Alw26I | GTCTC | 3 cut(s) | 233, 281, 386 |
| AlwI | GGATC | 2 cut(s) | 33, 231 |
| AoxI | GGCC | 5 cut(s) | 134, 268, 325, 354, 400 |
| AspS9I | GGNCC | 1 cut(s) | 325 |
| AsuHPI | GGTGA | 1 cut(s) | 250 |
| BauI | CACGAG | 1 cut(s) | 56 |
| BbrPI | CACGTG | 1 cut(s) | 283 |
| BccI | CCATC | 3 cut(s) | 84, 114, 214 |
| BceAI | ACGGC | 1 cut(s) | 255 |
| BciT130I | CCWGG | 2 cut(s) | 162, 395 |
| BcoDI | GTCTC | 3 cut(s) | 233, 281, 386 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 399 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 2 cut(s) | 162, 395 |
| BmgT120I | GGNCC | 1 cut(s) | 325 |
| BmrFI | CCNGG | 2 cut(s) | 162, 395 |
| BmsI | GCATC | 2 cut(s) | 236, 357 |
| BsaAI | YACGTR | 1 cut(s) | 283 |
| BsaI | GGTCTC | 1 cut(s) | 386 |
| BsaJI | CCNNGG | 3 cut(s) | 20, 73, 394 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 167, 363, 377 |
| Bse3DI | GCAATG | 1 cut(s) | 14 |
| BseBI | CCWGG | 2 cut(s) | 162, 395 |
| BseDI | CCNNGG | 3 cut(s) | 20, 73, 394 |
| BseGI | GGATG | 3 cut(s) | 225, 372, 435 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 167, 363, 377 |
| BseMI | GCAATG | 1 cut(s) | 14 |
| Bsh1236I | CGCG | 1 cut(s) | 120 |
| BshFI | GGCC | 5 cut(s) | 136, 270, 327, 356, 402 |
| BsiSI | CCGG | 1 cut(s) | 141 |
| BslFI | GGGAC | 2 cut(s) | 55, 110 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 167, 363, 377 |
| BsmAI | GTCTC | 3 cut(s) | 233, 281, 386 |
| BsmBI | CGTCTC | 2 cut(s) | 233, 281 |
| BsmFI | GGGAC | 2 cut(s) | 55, 110 |
| BsnI | GGCC | 5 cut(s) | 136, 270, 327, 356, 402 |
| Bso31I | GGTCTC | 1 cut(s) | 386 |
| Bsp143I | GATC | 2 cut(s) | 25, 223 |
| Bsp68I | TCGCGA | 1 cut(s) | 120 |
| BspACI | CCGC | 2 cut(s) | 5, 158 |
| BspANI | GGCC | 5 cut(s) | 136, 270, 327, 356, 402 |
| BspFNI | CGCG | 1 cut(s) | 120 |
| BspPI | GGATC | 2 cut(s) | 33, 231 |
| BspTNI | GGTCTC | 1 cut(s) | 386 |
| BsrDI | GCAATG | 1 cut(s) | 14 |
| BssECI | CCNNGG | 3 cut(s) | 20, 73, 394 |
| BssMI | GATC | 2 cut(s) | 25, 223 |
| BssSI | CACGAG | 1 cut(s) | 56 |
| BssT1I | CCWWGG | 2 cut(s) | 20, 73 |
| Bst2BI | CACGAG | 1 cut(s) | 56 |
| Bst2UI | CCWGG | 2 cut(s) | 162, 395 |
| Bst4CI | ACNGT | 1 cut(s) | 310 |
| BstBAI | YACGTR | 1 cut(s) | 283 |
| BstF5I | GGATG | 3 cut(s) | 225, 372, 435 |
| BstFNI | CGCG | 1 cut(s) | 120 |
| BstKTI | GATC | 2 cut(s) | 28, 226 |
| BstMAI | GTCTC | 3 cut(s) | 233, 281, 386 |
| BstMBI | GATC | 2 cut(s) | 25, 223 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 150, 399 |
| BstNI | CCWGG | 2 cut(s) | 162, 395 |
| BstNSI | RCATGY | 1 cut(s) | 393 |
| BstSCI | CCNGG | 2 cut(s) | 160, 393 |
| BstUI | CGCG | 1 cut(s) | 120 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 21 |
| BsuRI | GGCC | 5 cut(s) | 136, 270, 327, 356, 402 |
| BtsCI | GGATG | 3 cut(s) | 225, 372, 435 |
| BtuMI | TCGCGA | 1 cut(s) | 120 |
| Cfr13I | GGNCC | 1 cut(s) | 325 |
| CviAII | CATG | 4 cut(s) | 110, 167, 212, 390 |
| CviJI | RGCY | 8 cut(s) | 78, 136, 263, 270, 327, 338, 356, 402 |
| CviKI_1 | RGCY | 8 cut(s) | 78, 136, 263, 270, 327, 338, 356, 402 |
| DpnI | GATC | 2 cut(s) | 27, 225 |
| DpnII | GATC | 2 cut(s) | 25, 223 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 162 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 162 |
| Eco130I | CCWWGG | 2 cut(s) | 20, 73 |
| Eco31I | GGTCTC | 1 cut(s) | 386 |
| Eco57I | CTGAAG | 1 cut(s) | 249 |
| Eco72I | CACGTG | 1 cut(s) | 283 |
| EcoRII | CCWGG | 2 cut(s) | 160, 393 |
| EcoT14I | CCWWGG | 2 cut(s) | 20, 73 |
| ErhI | CCWWGG | 2 cut(s) | 20, 73 |
| Esp3I | CGTCTC | 2 cut(s) | 233, 281 |
| FaeI | CATG | 4 cut(s) | 113, 170, 215, 393 |
| FaiI | YATR | 8 cut(s) | 111, 168, 213, 299, 333, 391, 410, 436 |
| FaqI | GGGAC | 2 cut(s) | 55, 110 |
| FatI | CATG | 4 cut(s) | 109, 166, 211, 389 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 2 cut(s) | 232, 379 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HaeIII | GGCC | 5 cut(s) | 136, 270, 327, 356, 402 |
| HapII | CCGG | 1 cut(s) | 141 |
| Hin1II | CATG | 4 cut(s) | 113, 170, 215, 393 |
| HinfI | GANTC | 3 cut(s) | 68, 98, 203 |
| HpaII | CCGG | 1 cut(s) | 141 |
| HphI | GGTGA | 1 cut(s) | 250 |
| Hpy188I | TCNGA | 3 cut(s) | 30, 67, 199 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| HpyAV | CCTTC | 2 cut(s) | 147, 287 |
| HpyCH4III | ACNGT | 1 cut(s) | 310 |
| HpyCH4IV | ACGT | 1 cut(s) | 282 |
| HpyCH4V | TGCA | 1 cut(s) | 113 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 150, 399 |
| HpySE526I | ACGT | 1 cut(s) | 282 |
| Hsp92II | CATG | 4 cut(s) | 113, 170, 215, 393 |
| Kzo9I | GATC | 2 cut(s) | 25, 223 |
| LweI | GCATC | 2 cut(s) | 236, 357 |
| MaeII | ACGT | 1 cut(s) | 282 |
| MalI | GATC | 2 cut(s) | 27, 225 |
| MboI | GATC | 2 cut(s) | 25, 223 |
| MboII | GAAGA | 2 cut(s) | 31, 265 |
| MlyI | GAGTC | 2 cut(s) | 77, 92 |
| MmeI | TCCRAC | 1 cut(s) | 45 |
| MnlI | CCTC | 7 cut(s) | 42, 54, 87, 126, 316, 335, 392 |
| MspI | CCGG | 1 cut(s) | 141 |
| MspR9I | CCNGG | 2 cut(s) | 162, 395 |
| MvaI | CCWGG | 2 cut(s) | 162, 395 |
| MvnI | CGCG | 1 cut(s) | 120 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 150, 399 |
| NdeII | GATC | 2 cut(s) | 25, 223 |
| NlaIII | CATG | 4 cut(s) | 113, 170, 215, 393 |
| NruI | TCGCGA | 1 cut(s) | 120 |
| NspI | RCATGY | 1 cut(s) | 393 |
| PfeI | GAWTC | 1 cut(s) | 203 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 167 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PleI | GAGTC | 2 cut(s) | 76, 92 |
| PmaCI | CACGTG | 1 cut(s) | 283 |
| PmlI | CACGTG | 1 cut(s) | 283 |
| PpsI | GAGTC | 2 cut(s) | 76, 92 |
| Ppu21I | YACGTR | 1 cut(s) | 283 |
| Psp6I | CCWGG | 2 cut(s) | 160, 393 |
| PspCI | CACGTG | 1 cut(s) | 283 |
| PspGI | CCWGG | 2 cut(s) | 160, 393 |
| PspPI | GGNCC | 1 cut(s) | 325 |
| RruI | TCGCGA | 1 cut(s) | 120 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 2 cut(s) | 25, 223 |
| Sau96I | GGNCC | 1 cut(s) | 325 |
| SchI | GAGTC | 2 cut(s) | 77, 92 |
| ScrFI | CCNGG | 2 cut(s) | 162, 395 |
| SetI | ASST | 6 cut(s) | 65, 118, 166, 265, 285, 298 |
| SfaNI | GCATC | 2 cut(s) | 236, 357 |
| SsiI | CCGC | 2 cut(s) | 5, 158 |
| StyD4I | CCNGG | 2 cut(s) | 160, 393 |
| StyI | CCWWGG | 2 cut(s) | 20, 73 |
| TaaI | ACNGT | 1 cut(s) | 310 |
| TaiI | ACGT | 1 cut(s) | 285 |
| TaqII | GACCGA | 1 cut(s) | 221 |
| TauI | GCSGC | 1 cut(s) | 7 |
| TfiI | GAWTC | 1 cut(s) | 203 |
| TspDTI | ATGAA | 1 cut(s) | 428 |
| TspGWI | ACGGA | 1 cut(s) | 305 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 167 |
| XceI | RCATGY | 1 cut(s) | 393 |