SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52250 AT3G52250 |
| fragaria_vesca | FvH4_7g19850 FvH4_7g19850 FvH4_7g19850 FvH4_7g19850 |
| malus_domestica | MD01G1110800.v1.1 MD07G1176800.v1.1 MD12G1111400.v1.1 MD12G1111500.v1.1 |
| prunus_persica | Prupe.2G215600_v2.0.a1 Prupe.2G215600_v2.0.a1 |
| pyrus_communis | pycom01g13790 pycom01g13800 pycom01g13810 pycom07g17090 |
| rosa_chinensis | RchiOBHm_Chr1g0363841 |
| rosa_laevigata | RLG00000027542 |
| rosa_multiflora | Rmu_sc0002483.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00292930 |
| rosa_rugosa | Rorug01G0309600 Rorug01G0309700 |
| rosa_samantha | Rh1AG318200 Rh1BG281400 Rh1CG297800 Rh1DG312700 Rh4AG037100 |
| rosa_wichuraiana | Rw1G028240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 333, 1158 |
| AarI | CACCTGC | 1 cut(s) | 2200 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 165 |
| AatII | GACGTC | 1 cut(s) | 2070 |
| Acc36I | ACCTGC | 3 cut(s) | 1465, 2200, 2843 |
| AccB1I | GGYRCC | 1 cut(s) | 3574 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 170, 815 |
| AccII | CGCG | 2 cut(s) | 88, 113 |
| AciI | CCGC | 8 cut(s) | 5, 133, 144, 161, 461, 1996, 2131, 4482 |
| AcoI | YGGCCR | 4 cut(s) | 269, 547, 945, 4626 |
| AcuI | CTGAAG | 9 cut(s) | 726, 1094, 1358, 3291, 3408, 3825, 4197, 4208, 4538 |
| AcvI | CACGTG | 2 cut(s) | 284, 632 |
| AcyI | GRCGYC | 2 cut(s) | 2067, 4512 |
| AdeI | CACNNNGTG | 2 cut(s) | 2771, 3128 |
| AfaI | GTAC | 6 cut(s) | 1234, 2710, 3204, 4182, 4596, 4646 |
| AflIII | ACRYGT | 2 cut(s) | 192, 3011 |
| AgeI | ACCGGT | 1 cut(s) | 79 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3562 |
| AhlI | ACTAGT | 2 cut(s) | 2900, 2959 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 511, 543 |
| Alw21I | GWGCWC | 3 cut(s) | 482, 2253, 2801 |
| Alw26I | GTCTC | 7 cut(s) | 384, 741, 782, 1234, 2871, 3002, 3386 |
| Alw44I | GTGCAC | 1 cut(s) | 2797 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2837, 3617, 5009 |
| Ama87I | CYCGRG | 1 cut(s) | 392 |
| ApaLI | GTGCAC | 1 cut(s) | 2797 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 689, 721, 1859, 1891, 2080, 2112, 3385, 3417 |
| AseI | ATTAAT | 1 cut(s) | 3399 |
| AsiGI | ACCGGT | 1 cut(s) | 79 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 35, 4189, 4367 |
| AspLEI | GCGC | 4 cut(s) | 88, 115, 2375, 4290 |
| AsuC2I | CCSGG | 4 cut(s) | 393, 394, 863, 2930 |
| AsuII | TTCGAA | 1 cut(s) | 662 |
| AvaI | CYCGRG | 1 cut(s) | 392 |
| AvaII | GGWCC | 7 cut(s) | 77, 234, 1100, 1663, 3141, 4434, 4985 |
| AxyI | CCTNAGG | 2 cut(s) | 429, 3513 |
| BaeGI | GKGCMC | 2 cut(s) | 2801, 4155 |
| BalI | TGGCCA | 1 cut(s) | 549 |
| BamHI | GGATCC | 1 cut(s) | 3040 |
| BanI | GGYRCC | 1 cut(s) | 3574 |
| BanII | GRGCYC | 1 cut(s) | 581 |
| BauI | CACGAG | 1 cut(s) | 56 |
| BbrPI | CACGTG | 2 cut(s) | 284, 632 |
| BbsI | GAAGAC | 4 cut(s) | 618, 2070, 3381, 4061 |
| Bbv12I | GWGCWC | 3 cut(s) | 482, 2253, 2801 |
| BceAI | ACGGC | 2 cut(s) | 256, 1692 |
| BciVI | GTATCC | 2 cut(s) | 1480, 4421 |
| BclI | TGATCA | 2 cut(s) | 1446, 1968 |
| BcnI | CCSGG | 4 cut(s) | 393, 394, 863, 2930 |
| BcoDI | GTCTC | 7 cut(s) | 384, 741, 782, 1234, 2871, 3002, 3386 |
| BcuI | ACTAGT | 2 cut(s) | 2900, 2959 |
| BfmI | CTRYAG | 4 cut(s) | 2193, 3945, 4001, 4650 |
| BfoI | RGCGCY | 1 cut(s) | 4291 |
| BfuAI | ACCTGC | 3 cut(s) | 1465, 2200, 2843 |
| BfuI | GTATCC | 2 cut(s) | 1480, 4421 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4204 |
| BglII | AGATCT | 1 cut(s) | 3997 |
| Bme18I | GGWCC | 7 cut(s) | 77, 234, 1100, 1663, 3141, 4434, 4985 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3562 |
| BmeT110I | CYCGRG | 1 cut(s) | 392 |
| BmrI | ACTGGG | 2 cut(s) | 2733, 3428 |
| BmuI | ACTGGG | 2 cut(s) | 2733, 3428 |
| BpiI | GAAGAC | 4 cut(s) | 618, 2070, 3381, 4061 |
| BpmI | CTGGAG | 4 cut(s) | 272, 1011, 1184, 3479 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1104, 2694 |
| Bpu14I | TTCGAA | 1 cut(s) | 662 |
| BpuEI | CTTGAG | 2 cut(s) | 637, 4568 |
| BpuMI | CCSGG | 4 cut(s) | 393, 394, 863, 2930 |
| BsaAI | YACGTR | 2 cut(s) | 284, 632 |
| BsaBI | GATNNNNATC | 3 cut(s) | 223, 1491, 4800 |
| BsaHI | GRCGYC | 2 cut(s) | 2067, 4512 |
| BsaI | GGTCTC | 3 cut(s) | 1234, 2871, 3386 |
| BsaWI | WCCGGW | 3 cut(s) | 79, 727, 2718 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 5069, 5072, 5099, 5102 |
| Bse118I | RCCGGY | 2 cut(s) | 79, 1061 |
| Bse21I | CCTNAGG | 2 cut(s) | 429, 3513 |
| Bse3DI | GCAATG | 4 cut(s) | 1257, 1463, 4118, 4700 |
| Bse8I | GATNNNNATC | 3 cut(s) | 223, 1491, 4800 |
| BseJI | GATNNNNATC | 3 cut(s) | 223, 1491, 4800 |
| BseMI | GCAATG | 4 cut(s) | 1257, 1463, 4118, 4700 |
| BseMII | CTCAG | 9 cut(s) | 443, 693, 1095, 1473, 1644, 2708, 3504, 3822, 4268 |
| BseRI | GAGGAG | 6 cut(s) | 800, 1415, 3077, 4579, 5093, 5096 |
| BseSI | GKGCMC | 2 cut(s) | 2801, 4155 |
| BseX3I | CGGCCG | 1 cut(s) | 269 |
| BseYI | CCCAGC | 1 cut(s) | 73 |
| BsgI | GTGCAG | 3 cut(s) | 752, 759, 1392 |
| Bsh1236I | CGCG | 2 cut(s) | 88, 113 |
| Bsh1285I | CGRYCG | 1 cut(s) | 272 |
| BshNI | GGYRCC | 1 cut(s) | 3574 |
| BshTI | ACCGGT | 1 cut(s) | 79 |
| BsiEI | CGRYCG | 1 cut(s) | 272 |
| BsiHKAI | GWGCWC | 3 cut(s) | 482, 2253, 2801 |
| BsiHKCI | CYCGRG | 1 cut(s) | 392 |
| BsmAI | GTCTC | 7 cut(s) | 384, 741, 782, 1234, 2871, 3002, 3386 |
| BsmBI | CGTCTC | 1 cut(s) | 782 |
| BsmI | GAATGC | 5 cut(s) | 463, 1700, 1761, 2653, 5031 |
| Bso31I | GGTCTC | 3 cut(s) | 1234, 2871, 3386 |
| BsoBI | CYCGRG | 1 cut(s) | 392 |
| Bsp119I | TTCGAA | 1 cut(s) | 662 |
| Bsp1286I | GDGCHC | 5 cut(s) | 482, 581, 2253, 2801, 4155 |
| Bsp19I | CCATGG | 2 cut(s) | 1221, 3097 |
| BspACI | CCGC | 8 cut(s) | 5, 133, 144, 161, 461, 1996, 2131, 4482 |
| BspCNI | CTCAG | 9 cut(s) | 442, 694, 1096, 1474, 1645, 2707, 3505, 3823, 4267 |
| BspFNI | CGCG | 2 cut(s) | 88, 113 |
| BspHI | TCATGA | 2 cut(s) | 876, 3370 |
| BspMAI | CTGCAG | 3 cut(s) | 2197, 4005, 4654 |
| BspMI | ACCTGC | 3 cut(s) | 1465, 2200, 2843 |
| BspQI | GCTCTTC | 1 cut(s) | 2170 |
| BspT104I | TTCGAA | 1 cut(s) | 662 |
| BspT107I | GGYRCC | 1 cut(s) | 3574 |
| BspTNI | GGTCTC | 3 cut(s) | 1234, 2871, 3386 |
| BsrDI | GCAATG | 4 cut(s) | 1257, 1463, 4118, 4700 |
| BsrFI | RCCGGY | 2 cut(s) | 79, 1061 |
| BssAI | RCCGGY | 2 cut(s) | 79, 1061 |
| BssNI | GRCGYC | 2 cut(s) | 2067, 4512 |
| BssSI | CACGAG | 1 cut(s) | 56 |
| BssT1I | CCWWGG | 6 cut(s) | 814, 1221, 1510, 2405, 3097, 3187 |
| Bst2BI | CACGAG | 1 cut(s) | 56 |
| Bst6I | CTCTTC | 3 cut(s) | 1032, 2170, 3384 |
| BstACI | GRCGYC | 2 cut(s) | 2067, 4512 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 992, 3602 |
| BstBAI | YACGTR | 2 cut(s) | 284, 632 |
| BstBI | TTCGAA | 1 cut(s) | 662 |
| BstDSI | CCRYGG | 2 cut(s) | 1221, 3097 |
| BstFNI | CGCG | 2 cut(s) | 88, 113 |
| BstH2I | RGCGCY | 1 cut(s) | 4291 |
| BstHHI | GCGC | 4 cut(s) | 88, 115, 2375, 4290 |
| BstMAI | GTCTC | 7 cut(s) | 384, 741, 782, 1234, 2871, 3002, 3386 |
| BstMCI | CGRYCG | 1 cut(s) | 272 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 992, 1871, 2696, 3602, 4204 |
| BstNSI | RCATGY | 3 cut(s) | 196, 625, 3015 |
| BstSFI | CTRYAG | 4 cut(s) | 2193, 3945, 4001, 4650 |
| BstSLI | GKGCMC | 2 cut(s) | 2801, 4155 |
| BstUI | CGCG | 2 cut(s) | 88, 113 |
| BstV2I | GAAGAC | 4 cut(s) | 618, 2070, 3381, 4061 |
| BstX2I | RGATCY | 6 cut(s) | 1492, 1801, 2365, 3040, 3997, 5005 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 21, 3544, 4736 |
| BstYI | RGATCY | 6 cut(s) | 1492, 1801, 2365, 3040, 3997, 5005 |
| BstZI | CGGCCG | 1 cut(s) | 269 |
| Bsu36I | CCTNAGG | 2 cut(s) | 429, 3513 |
| BsuI | GTATCC | 2 cut(s) | 1480, 4421 |
| BtgI | CCRYGG | 2 cut(s) | 1221, 3097 |
| BtgZI | GCGATG | 2 cut(s) | 103, 2144 |
| BtsI | GCAGTG | 2 cut(s) | 3093, 3790 |
| BtsIMutI | CAGTG | 6 cut(s) | 694, 3093, 3416, 3432, 3790, 3933 |
| BveI | ACCTGC | 3 cut(s) | 1465, 2200, 2843 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2837, 3617, 5009 |
| CciI | TCATGA | 2 cut(s) | 876, 3370 |
| CfoI | GCGC | 4 cut(s) | 88, 115, 2375, 4290 |
| Cfr10I | RCCGGY | 2 cut(s) | 79, 1061 |
| Cfr9I | CCCGGG | 1 cut(s) | 392 |
| CseI | GACGC | 2 cut(s) | 1863, 4501 |
| Csp6I | GTAC | 6 cut(s) | 1233, 2709, 3203, 4181, 4595, 4645 |
| CspAI | ACCGGT | 1 cut(s) | 79 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1485, 1520 |
| CviQI | GTAC | 6 cut(s) | 1233, 2709, 3203, 4181, 4595, 4645 |
| DraI | TTTAAA | 1 cut(s) | 2467 |
| DraIII | CACNNNGTG | 2 cut(s) | 2771, 3128 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 165 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3562 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 165 |
| EaeI | YGGCCR | 4 cut(s) | 269, 547, 945, 4626 |
| EagI | CGGCCG | 1 cut(s) | 269 |
| Eam1104I | CTCTTC | 3 cut(s) | 1032, 2170, 3384 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3562 |
| EarI | CTCTTC | 3 cut(s) | 1032, 2170, 3384 |
| EciI | GGCGGA | 1 cut(s) | 133 |
| EclXI | CGGCCG | 1 cut(s) | 269 |
| Eco130I | CCWWGG | 6 cut(s) | 814, 1221, 1510, 2405, 3097, 3187 |
| Eco147I | AGGCCT | 2 cut(s) | 427, 3511 |
| Eco24I | GRGCYC | 1 cut(s) | 581 |
| Eco31I | GGTCTC | 3 cut(s) | 1234, 2871, 3386 |
| Eco32I | GATATC | 2 cut(s) | 2575, 2763 |
| Eco47I | GGWCC | 7 cut(s) | 77, 234, 1100, 1663, 3141, 4434, 4985 |
| Eco52I | CGGCCG | 1 cut(s) | 269 |
| Eco57I | CTGAAG | 9 cut(s) | 726, 1094, 1358, 3291, 3408, 3825, 4197, 4208, 4538 |
| Eco72I | CACGTG | 2 cut(s) | 284, 632 |
| Eco81I | CCTNAGG | 2 cut(s) | 429, 3513 |
| Eco88I | CYCGRG | 1 cut(s) | 392 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1663, 3141 |
| EcoRI | GAATTC | 4 cut(s) | 568, 793, 2281, 3862 |
| EcoRV | GATATC | 2 cut(s) | 2575, 2763 |
| EcoT14I | CCWWGG | 6 cut(s) | 814, 1221, 1510, 2405, 3097, 3187 |
| EcoT22I | ATGCAT | 1 cut(s) | 226 |
| EcoT38I | GRGCYC | 1 cut(s) | 581 |
| ErhI | CCWWGG | 6 cut(s) | 814, 1221, 1510, 2405, 3097, 3187 |
| Esp3I | CGTCTC | 1 cut(s) | 782 |
| FauI | CCCGC | 1 cut(s) | 4475 |
| FbaI | TGATCA | 2 cut(s) | 1446, 1968 |
| FriOI | GRGCYC | 1 cut(s) | 581 |
| GlaI | GCGC | 4 cut(s) | 87, 114, 2374, 4289 |
| GsaI | CCCAGC | 1 cut(s) | 77 |
| GsuI | CTGGAG | 4 cut(s) | 272, 1011, 1184, 3479 |
| HaeII | RGCGCY | 1 cut(s) | 4291 |
| HgaI | GACGC | 2 cut(s) | 1863, 4501 |
| HhaI | GCGC | 4 cut(s) | 88, 115, 2375, 4290 |
| Hin1I | GRCGYC | 2 cut(s) | 2067, 4512 |
| Hin6I | GCGC | 4 cut(s) | 86, 113, 2373, 4288 |
| HinP1I | GCGC | 4 cut(s) | 86, 113, 2373, 4288 |
| HincII | GTYRAC | 2 cut(s) | 859, 3454 |
| HindII | GTYRAC | 2 cut(s) | 859, 3454 |
| HindIII | AAGCTT | 2 cut(s) | 2270, 2427 |
| Hpy166II | GTNNAC | 6 cut(s) | 176, 859, 938, 2799, 3454, 4919 |
| Hpy8I | GTNNAC | 6 cut(s) | 176, 859, 938, 2799, 3454, 4919 |
| Hpy99I | CGWCG | 2 cut(s) | 277, 4135 |
| HpyCH4IV | ACGT | 4 cut(s) | 283, 631, 1580, 2067 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 992, 1871, 2696, 3602, 4204 |
| HpySE526I | ACGT | 4 cut(s) | 283, 631, 1580, 2067 |
| Hsp92I | GRCGYC | 2 cut(s) | 2067, 4512 |
| HspAI | GCGC | 4 cut(s) | 86, 113, 2373, 4288 |
| Ksp22I | TGATCA | 2 cut(s) | 1446, 1968 |
| LguI | GCTCTTC | 1 cut(s) | 2170 |
| LmnI | GCTCC | 6 cut(s) | 477, 1203, 1465, 2180, 3227, 5064 |
| MaeII | ACGT | 4 cut(s) | 283, 631, 1580, 2067 |
| MfeI | CAATTG | 1 cut(s) | 2051 |
| MflI | RGATCY | 6 cut(s) | 1492, 1801, 2365, 3040, 3997, 5005 |
| MhlI | GDGCHC | 5 cut(s) | 482, 581, 2253, 2801, 4155 |
| MlsI | TGGCCA | 1 cut(s) | 549 |
| MluNI | TGGCCA | 1 cut(s) | 549 |
| MmeI | TCCRAC | 2 cut(s) | 45, 261 |
| Mox20I | TGGCCA | 1 cut(s) | 549 |
| Mph1103I | ATGCAT | 1 cut(s) | 226 |
| MroXI | GAANNNNTTC | 3 cut(s) | 35, 4189, 4367 |
| MscI | TGGCCA | 1 cut(s) | 549 |
| MslI | CAYNNNNRTG | 5 cut(s) | 19, 219, 4734, 4824, 5024 |
| Msp20I | TGGCCA | 1 cut(s) | 549 |
| MspA1I | CMGCKG | 4 cut(s) | 135, 1368, 2834, 4482 |
| MunI | CAATTG | 1 cut(s) | 2051 |
| Mva1269I | GAATGC | 5 cut(s) | 463, 1700, 1761, 2653, 5031 |
| MvnI | CGCG | 2 cut(s) | 88, 113 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 992, 1871, 2696, 3602, 4204 |
| NciI | CCSGG | 4 cut(s) | 393, 394, 863, 2930 |
| NcoI | CCATGG | 2 cut(s) | 1221, 3097 |
| NmeAIII | GCCGAG | 3 cut(s) | 141, 172, 3190 |
| NsiI | ATGCAT | 1 cut(s) | 226 |
| NspI | RCATGY | 3 cut(s) | 196, 625, 3015 |
| NspV | TTCGAA | 1 cut(s) | 662 |
| PagI | TCATGA | 2 cut(s) | 876, 3370 |
| PaqCI | CACCTGC | 1 cut(s) | 2200 |
| PasI | CCCWGGG | 2 cut(s) | 574, 2621 |
| PceI | AGGCCT | 2 cut(s) | 427, 3511 |
| PciI | ACATGT | 2 cut(s) | 192, 3011 |
| PciSI | GCTCTTC | 1 cut(s) | 2170 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4340 |
| PctI | GAATGC | 5 cut(s) | 463, 1700, 1761, 2653, 5031 |
| PdmI | GAANNNNTTC | 3 cut(s) | 35, 4189, 4367 |
| PflFI | GACNNNGTC | 1 cut(s) | 703 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 170, 815 |
| PfoI | TCCNGGA | 2 cut(s) | 1567, 4413 |
| PinAI | ACCGGT | 1 cut(s) | 79 |
| PmaCI | CACGTG | 2 cut(s) | 284, 632 |
| PmlI | CACGTG | 2 cut(s) | 284, 632 |
| Ppu21I | YACGTR | 2 cut(s) | 284, 632 |
| PpuMI | RGGWCCY | 2 cut(s) | 1663, 3141 |
| PscI | ACATGT | 2 cut(s) | 192, 3011 |
| PshBI | ATTAAT | 1 cut(s) | 3399 |
| PsiI | TTATAA | 2 cut(s) | 333, 1158 |
| Psp5II | RGGWCCY | 2 cut(s) | 1663, 3141 |
| PspCI | CACGTG | 2 cut(s) | 284, 632 |
| PspFI | CCCAGC | 1 cut(s) | 73 |
| PspPPI | RGGWCCY | 2 cut(s) | 1663, 3141 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4285, 4317 |
| PstI | CTGCAG | 3 cut(s) | 2197, 4005, 4654 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2837, 3617, 5009 |
| PsuI | RGATCY | 6 cut(s) | 1492, 1801, 2365, 3040, 3997, 5005 |
| PsyI | GACNNNGTC | 1 cut(s) | 703 |
| PvuII | CAGCTG | 2 cut(s) | 1368, 2834 |
| RsaI | GTAC | 6 cut(s) | 1234, 2710, 3204, 4182, 4596, 4646 |
| RsaNI | GTAC | 6 cut(s) | 1233, 2709, 3203, 4181, 4595, 4645 |
| RseI | CAYNNNNRTG | 5 cut(s) | 19, 219, 4734, 4824, 5024 |
| SapI | GCTCTTC | 1 cut(s) | 2170 |
| SbfI | CCTGCAGG | 1 cut(s) | 2197 |
| SdaI | CCTGCAGG | 1 cut(s) | 2197 |
| SduI | GDGCHC | 5 cut(s) | 482, 581, 2253, 2801, 4155 |
| SfcI | CTRYAG | 4 cut(s) | 2193, 3945, 4001, 4650 |
| SfuI | TTCGAA | 1 cut(s) | 662 |
| SinI | GGWCC | 7 cut(s) | 77, 234, 1100, 1663, 3141, 4434, 4985 |
| SmaI | CCCGGG | 1 cut(s) | 394 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 19, 219, 4734, 4824, 5024 |
| SmlI | CTYRAG | 2 cut(s) | 652, 4547 |
| SmoI | CTYRAG | 2 cut(s) | 652, 4547 |
| SpeI | ACTAGT | 2 cut(s) | 2900, 2959 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2197 |
| SseBI | AGGCCT | 2 cut(s) | 427, 3511 |
| SsiI | CCGC | 8 cut(s) | 5, 133, 144, 161, 461, 1996, 2131, 4482 |
| SspI | AATATT | 1 cut(s) | 4087 |
| StuI | AGGCCT | 2 cut(s) | 427, 3511 |
| StyI | CCWWGG | 6 cut(s) | 814, 1221, 1510, 2405, 3097, 3187 |
| TaiI | ACGT | 4 cut(s) | 286, 634, 1583, 2070 |
| TaqI | TCGA | 2 cut(s) | 662, 2487 |
| TaqII | GACCGA | 1 cut(s) | 222 |
| TatI | WGTACW | 3 cut(s) | 1232, 2708, 4594 |
| TauI | GCSGC | 2 cut(s) | 7, 1999 |
| TscAI | CASTG | 6 cut(s) | 694, 3093, 3423, 3432, 3790, 3933 |
| TspGWI | ACGGA | 3 cut(s) | 2060, 4349, 5057 |
| TspMI | CCCGGG | 1 cut(s) | 392 |
| TspRI | CASTG | 6 cut(s) | 694, 3093, 3423, 3432, 3790, 3933 |
| Tth111I | GACNNNGTC | 1 cut(s) | 703 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 170, 815 |
| VneI | GTGCAC | 1 cut(s) | 2797 |
| VpaK11BI | GGWCC | 7 cut(s) | 77, 234, 1100, 1663, 3141, 4434, 4985 |
| VspI | ATTAAT | 1 cut(s) | 3399 |
| XbaI | TCTAGA | 1 cut(s) | 3460 |
| XceI | RCATGY | 3 cut(s) | 196, 625, 3015 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 816 |
| XmaI | CCCGGG | 1 cut(s) | 392 |
| XmnI | GAANNNNTTC | 3 cut(s) | 35, 4189, 4367 |
| ZraI | GACGTC | 1 cut(s) | 2068 |
| Zsp2I | ATGCAT | 1 cut(s) | 226 |