Rh1AG318200
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0005694
Physical Location & Seq
Forward (+)
55266439 .. 55275655
9217 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG318200.1

Sequence Viewer

Length: 3891 bp
ATGGATTCTAGTACAATGAGACCTACTGCAATGAACAAGTTGCTTACATGGAAAGGTGATATTTCAAAAGTATTGGAGGTGACTGAATCAGAAATTGATTATCTTGAAAACGAACTGAAGATATTGAACTCTGATTCTAGGGACAGCTGTGCAGCAGCTTCCAGTTCTTTGCCTGTTGAGGAGAGTGATAAATCTGGCAAAGAACACGCTACTGCCAAAAATTTGATCACCAGACCTGCTCCATTGCAAATTTTTTCTTCTGAGGATACAGATCCACAGAAGTTGGCCCTTGGTAATGGAGAACAGGGAGAGTCCTGTGGTGTTAAGGATCAAGATATGGATAGTCCTGGAACAGCAACGTCAAAATTTGTTGAACAGTTACCTTTGTTGAAGGTGGCTTCATCTGATATGGGGAATCCAAGTGGTTGTGCTGAGAACCAGGACCTAGTTCAAACGGCTGAAAGGGATGTAGAATGCTTAGTGGCTGGTAAAGATGAAGAAAAAAGTGACCTGTCTGCGCATGGAAATAGTAGAATGCTTTTAGTTAGTGAGATAATTACACCTGTTTCTGATGGTTTGGATCTTTGTGCTGGTGTAGTAGATACATTATGTGATTCTATATTTTCTTCCAATAAAGAATCTGCAAATAGAGCGTCTGACATATTTAATAAGCTGTTGCCCAAAGATAACTGTGAAGTTGATATTTTGGGACTTGGTATTTCCTCATCATGGAAGAATGATTCATTGATCAAAGAGAAGTTCAAAGCAAGGAAGCGGCGTTTAAGGTTTATGGAGAGAGTCATAACCTTAAAATATAAGGCCCATCAGCAATTGTGGAAGGAAGACGTCCGTTTGTTTTCAGAGCGAAAATATCGTCCAAAATCTCACAAAAAATGTGATTTAGGATTGCGGAACACCACCAATGGGAACCAGAAGCATCGCTCTTCCATTCGCTCCCGTTTTTCTACACCTGCAGGAAATTTGAGCCTGGTTCCTACTAAAGAGGTTGAGAAGTTTGCTAACAAGGTGCTCTGTGATTCCCAAGTCAAGCTTTATAGGAATTCATTGAAGATGCCAGCCTTAATTTTGGACAAGAAGGAGAAGATTGTGACAAGGTTTGTTTCTAGTAATGGCTTAGTTGAAGATCCCTGCGCTGTTGAGAAGGAAAGGGCTTTGATTAACCCTTGGACACCAGAAGAAAAAGAAGCTTTCATTGAAAAGTTGGTGGTCTTTGGGAAAGATTTTAAAAAGATCGCCTCTTTTTTCGACCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAGCATCACAAATCTGCTGCTTTTCAGAAAGCAAAGAAGAAGCCTGATATCTCTAAACTAGGAAAGTCCTCTGCCAATACCTACATGATTAACCCTGGGACAAAATGGAATCGTGAGGTGAATGCTGCTTCCCTTGATATTCTTGGTGCTGCTTCTGTGATGGCAGCTCAGGCTGATGGCAGTACAAGAAACCGGACTGGGCGTTTAATTTTAGGAGGTTACAAGAATATGAAGATATCACAGAGTCACGATGTGACTGTTGAAAGGTCGTGCACTTTTGATGTTATTGGGAATGAGAGAGAAACAGCTGCTGCTGATGTTTTAGCAGGTATCTGTGGGTCTCTGTCTTCCGAGGCTGTCAGTTCTTGCATCACTAGTTCCATTGATCCTGGTGACGGTTGCCGGGAATGGAAGTGCCAGAAAGTTGATTCACTAGTAAGACGACCTTTGACACCTGATGTTATGCAAAGTGTTGATGATGAGACATGTTCAGATGAGAGTTGTGGTGAAATGGATCCTTCTGATTGGACAGATGAGGAGAAGTCTAGCTTTATACAGGCAGTGTCATCCCATGGTAAGGACTTTGCTATGATCTCACGATGTGTAAGAACGAGGTCCCAGAATCAATGCAAGGTTTTCTTTAGTAAGGCTCGGAAGTGCCTTGGGCTTGATTTGGTACATCCTCGGCGTGGAAATGAAGGAGCTTCTATTGTTGATGATGCTAATGGAGGTGGGAGTGATACTGAAGATGCCTGCGTTGTGGAAACTGGTTCTGGTATTTCCATTGATAAATCGGGTTGTGAAATGAATGAGGACTTGCCATTGTCTGTTATGGACATGGATCATGAAGACTCTGATCCTGAAGAGACCATTAATTTGAAATGTGATCCACTGGGATCAGTGGAAAACAATGTGAAGGGAGAAGTTGACCATCTAGATAACAAGGCTCTCAAATCTTCTGATGCACTCCAGATGGAAGATAGGCCTGTGGTAATTTTTGATGATGTCACCAACATCCATGATGTTGGTGACAGACTGTCCGAGTCGGTGCCTGCCCAGAGAAGTGAAGCATTTTCTGCTGATGCAGATGCTGTGAGAGATAATGTGGCTGAAAAGAGAAGTTTGGTTGCAGAGTCGCTCATTGGTGAGGGAATCAGCTCCGACCTACCTAAATTGGAGGGACAAGGTGAAAGATGCAATACAGATACAAGTGGATGTGGCTTACAAGTTTCAGCAAATGATTCTAATTCTAGTGGCAGTGCTTCTGACATGGCTGCTGAAGGTTCCTGTTCAGGTTTGGCTGCTGAGTGCCTGCATCGAGTGTCGGTTGAGCTGAATTCTATGCAAAAGTCGTCTGTCAATTCATTGTCACATGAGAATCTTCCTGCTACTGCAATTTCAGTGCCGGAAAATTCTGCTGTGGTTGAATATGGGAAAGCCATTAACCAAGATAGGTTGTCATCAACATCAGATCTGCAGGAGGGTAGAGATAAGCAGTCCTTATCTGTTGGTGGAGATGATTGTCACAAGCACTTGCCTGGTCTTCCAGTACTGACAAATATTGATCCAGCCCATGTTCTCAGGGGTTATCCATTGCACATGGCGACGAAGAAAGAGATCAATGGGCACATCAGTTCTGGTAACTTATCTGAAGTACAAAACCTTTCAAAGCCAGACGGGCCAAAAGATTGCCTTCTTCAGTTTGGTAACTGCAAACCCCGAAGTTCTCAGGATTTTCCACTTGTGCATCAAAAGATAGAGCGCCGAAGTGATAATACAAAAGCCCATTCATGGAGTTCATCAGATACGGATAAACCAAGCAGGAATGGTGATGTGAAACTGTTCGGTAAGATACTCACCAATACCTCCAAGTCCAGTTCCAGTATCCAGGAGAATGAAGAAAAGGGGTCCAATATCCATAATTTAAGCAACAAGTCATCTAACTTAAAATTCAGCGGGCATCATAACTTAGATGGAAACTCTGGCGTCCTGAAGTTTGATAGTAGTAATTATACTGGCCTTGAGAATGTTCCCAGGAGGAGTTACAGCTTTTGGGAAGGGAACAAAGTACAAAATGGATCTTTTCCTGATTCGGCCATCTTGCTTGCCAAGTACCCTGCAGCTTTTGGTAACTTTACTACATCCTCGTCCAAATTGGAACAGAAACCATTGCAGGCAGTTAGGAACAATGAGGGCCATGTAAATGGTGCATCAGTTTTTCCTTCAAGGGAAATTAGTAGCAGCAGCAGTAGTGGAATTGTTGATTATCATCAGGTGTTCAGTAGGCATCGTGATGGTGGTGCTAAAGTGCCACCATTTACAGTAGATGTGAAGCAGAGGCAAGACATATTTGATGTTTCAAGACGAAATGGGTTTGAATCAAGTTTACAGCAGCCAGGAAGGGGGATTGCCGGAATGAATGTGGTAGGGAGAGGGGGAATTATGGTAGGAGGGCCATGCACAGGTGTTTCAGATCCTGTGGCTGCCATAAGAATGCACTATGCGAAAACGGAACAGTATGGAGGGCAAGGGAGCATCATCAGGGAGGAGGAGTCGTGGAGAGGTAAGGGTGACATAGGGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0000226 GO:0000228 GO:0000785 GO:0000790 GO:0000981 GO:0001067 GO:0001085 GO:0001102 GO:0001932 GO:0001933 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003714 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005874 GO:0005876 GO:0006109 GO:0006110 GO:0006139 GO:0006140 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009966 GO:0009968 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010563 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010648 GO:0015630 GO:0016043 GO:0016070 GO:0016922 GO:0017053 GO:0018130 GO:0019216 GO:0019219 GO:0019220 GO:0019222 GO:0019438 GO:0019899 GO:0022402 GO:0022607 GO:0023051 GO:0023057 GO:0030808 GO:0030811 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032368 GO:0032774 GO:0032872 GO:0032873 GO:0032879 GO:0032890 GO:0032991 GO:0033613 GO:0034641 GO:0034645 GO:0034654 GO:0035257 GO:0042325 GO:0042326 GO:0042826 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043269 GO:0043408 GO:0043409 GO:0043467 GO:0043470 GO:0044070 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045892 GO:0045934 GO:0045936 GO:0046328 GO:0046329 GO:0046483 GO:0046966 GO:0048511 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051049 GO:0051171 GO:0051172 GO:0051174 GO:0051193 GO:0051196 GO:0051225 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051427 GO:0060147 GO:0060149 GO:0060255 GO:0060964 GO:0060965 GO:0060966 GO:0060967 GO:0060968 GO:0060969 GO:0062012 GO:0065007 GO:0070013 GO:0070302 GO:0070303 GO:0070920 GO:0070925 GO:0071704 GO:0071840 GO:0072361 GO:0072362 GO:0072367 GO:0072368 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0097659 GO:0098679 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1900371 GO:1900402 GO:1900542 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902531 GO:1902532 GO:1902679 GO:1903506 GO:1903507 GO:1903578 GO:1903798 GO:1903799 GO:1905952 GO:2000112 GO:2000113 GO:2000191 GO:2001141 GO:2001169
KEGG Pathways
Metabolic & Signaling
ko01522 ko04919 ko05202 map01522 map04919 map05202
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

1296

Amino Acids

141.1

Weight (kDa)

5.75

Isoelectric Point (pI)

45.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 395 - 437 2.8e-08 Myb-like DNA-binding domain
DUF7952 PF25826 396 - 447 4.6e-06 Domain of unknown function (DUF7952)
Myb_DNA-binding PF00249 610 - 651 2.2e-08 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 979
AatII GACGTC 1 cut(s) 849
Acc16I TGCGCA 1 cut(s) 519
Acc36I ACCTGC 3 cut(s) 244, 979, 1622
AccB1I GGYRCC 1 cut(s) 2353
AciI CCGC 3 cut(s) 775, 910, 3261
AcoI YGGCCR 1 cut(s) 3399
AcsI RAATTY 8 cut(s) 220, 249, 365, 979, 1060, 2641, 2716, 3254
AcuI CTGAAG 7 cut(s) 137, 2070, 2187, 2604, 2976, 2987, 3317
AcyI GRCGYC 2 cut(s) 846, 3291
AdeI CACNNNGTG 2 cut(s) 1558, 1907
AfaI GTAC 7 cut(s) 13, 1489, 1983, 2856, 2961, 3375, 3419
AfiI CCNNNNNNNGG 8 cut(s) 729, 924, 1700, 1882, 1994, 3096, 3707, 3767
AflIII ACRYGT 1 cut(s) 1790
AhdI GACNNNNNGTC 1 cut(s) 2341
AhlI ACTAGT 2 cut(s) 1679, 1738
AjnI CCWGG 9 cut(s) 346, 438, 987, 1399, 1693, 2842, 3192, 3338, 3700
Alw21I GWGCWC 2 cut(s) 1032, 1580
Alw26I GTCTC 4 cut(s) 13, 1650, 1781, 2165
Alw44I GTGCAC 1 cut(s) 1576
AlwNI CAGNNNCTG 3 cut(s) 1616, 2396, 3782
AoxI GGCC 8 cut(s) 285, 819, 2288, 2984, 3322, 3399, 3499, 3758
ApaLI GTGCAC 1 cut(s) 1576
ApoI RAATTY 8 cut(s) 220, 249, 365, 979, 1060, 2641, 2716, 3254
ArsI GACNNNNNNTTYG 6 cut(s) 638, 670, 859, 891, 2164, 2196
AseI ATTAAT 1 cut(s) 2178
Asp700I GAANNNNTTC 1 cut(s) 3146
AspLEI GCGC 3 cut(s) 520, 1154, 3069
AspS9I GGNCC 8 cut(s) 286, 442, 820, 1920, 2984, 3213, 3499, 3758
AsuC2I CCSGG 1 cut(s) 1709
AvaII GGWCC 3 cut(s) 442, 1920, 3213
BaeGI GKGCMC 2 cut(s) 1580, 2934
BamHI GGATCC 1 cut(s) 1819
BanI GGYRCC 1 cut(s) 2353
BarI GAAGNNNNNNTAC 2 cut(s) 3064, 3096
BbsI GAAGAC 4 cut(s) 849, 1644, 2160, 2840
Bbv12I GWGCWC 2 cut(s) 1032, 1580
BccI CCATC 9 cut(s) 566, 831, 1459, 1475, 2244, 2272, 3272, 3410, 3593
BceAI ACGGC 1 cut(s) 471
BciT130I CCWGG 9 cut(s) 348, 440, 989, 1401, 1695, 2844, 3194, 3340, 3702
BciVI GTATCC 2 cut(s) 259, 3200
BclI TGATCA 2 cut(s) 225, 747
BcnI CCSGG 1 cut(s) 1709
BcoDI GTCTC 4 cut(s) 13, 1650, 1781, 2165
BcuI ACTAGT 2 cut(s) 1679, 1738
BfmI CTRYAG 3 cut(s) 972, 2780, 3423
BfoI RGCGCY 1 cut(s) 3070
BfuAI ACCTGC 3 cut(s) 244, 979, 1622
BfuI GTATCC 2 cut(s) 259, 3200
BglI GCCNNNNNGGC 1 cut(s) 2983
BglII AGATCT 1 cut(s) 2776
BmcAI AGTACT 1 cut(s) 2856
Bme18I GGWCC 3 cut(s) 442, 1920, 3213
BmeRI GACNNNNNGTC 1 cut(s) 2341
BmgT120I GGNCC 8 cut(s) 286, 442, 820, 1920, 2984, 3213, 3499, 3758
BmiI GGNNCC 7 cut(s) 929, 993, 1821, 1922, 2355, 2590, 3214
BmrI ACTGGG 2 cut(s) 1512, 2207
BmuI ACTGGG 2 cut(s) 1512, 2207
BpiI GAAGAC 4 cut(s) 849, 1644, 2160, 2840
BpmI CTGGAG 1 cut(s) 2258
Bpu10I CCTNAGC 1 cut(s) 1473
BpuEI CTTGAG 1 cut(s) 3347
BpuMI CCSGG 1 cut(s) 1709
BsaBI GATNNNNATC 2 cut(s) 270, 3573
BsaHI GRCGYC 2 cut(s) 846, 3291
BsaI GGTCTC 3 cut(s) 13, 1650, 2165
BsaJI CCNNGG 9 cut(s) 289, 1184, 1399, 1400, 1656, 1876, 1966, 1988, 3338
BsaWI WCCGGW 1 cut(s) 1497
BsaXI ACNNNNNCTCC 4 cut(s) 3842, 3845, 3872, 3875
Bsc4I CCNNNNNNNGG 8 cut(s) 729, 924, 1700, 1882, 1994, 3096, 3707, 3767
Bse1I ACTGG 8 cut(s) 162, 1507, 2077, 2202, 2852, 3180, 3186, 3325
Bse3DI GCAATG 4 cut(s) 36, 242, 2897, 3473
Bse8I GATNNNNATC 2 cut(s) 270, 3573
BseBI CCWGG 9 cut(s) 348, 440, 989, 1401, 1695, 2844, 3194, 3340, 3702
BseDI CCNNGG 9 cut(s) 289, 1184, 1399, 1400, 1656, 1876, 1966, 1988, 3338
BseGI GGATG 6 cut(s) 472, 1871, 1984, 2319, 2525, 3446
BseJI GATNNNNATC 2 cut(s) 270, 3573
BseLI CCNNNNNNNGG 8 cut(s) 729, 924, 1700, 1882, 1994, 3096, 3707, 3767
BseMI GCAATG 4 cut(s) 36, 242, 2897, 3473
BseMII CTCAG 6 cut(s) 252, 423, 1487, 2601, 2899, 3047
BseNI ACTGG 8 cut(s) 162, 1507, 2077, 2202, 2852, 3180, 3186, 3325
BseRI GAGGAG 5 cut(s) 194, 1856, 3358, 3866, 3869
BseSI GKGCMC 2 cut(s) 1580, 2934
BsgI GTGCAG 1 cut(s) 171
BshFI GGCC 8 cut(s) 287, 821, 2290, 2986, 3324, 3401, 3501, 3760
BshNI GGYRCC 1 cut(s) 2353
BsiHKAI GWGCWC 2 cut(s) 1032, 1580
BsiSI CCGG 4 cut(s) 1498, 1708, 2711, 3717
BslFI GGGAC 5 cut(s) 155, 723, 1417, 1906, 2499
BslI CCNNNNNNNGG 8 cut(s) 729, 924, 1700, 1882, 1994, 3096, 3707, 3767
BsmAI GTCTC 4 cut(s) 13, 1650, 1781, 2165
BsmFI GGGAC 5 cut(s) 155, 723, 1417, 1906, 2499
BsmI GAATGC 4 cut(s) 479, 540, 1432, 3804
BsnI GGCC 8 cut(s) 287, 821, 2290, 2986, 3324, 3401, 3501, 3760
Bso31I GGTCTC 3 cut(s) 13, 1650, 2165
Bsp1286I GDGCHC 3 cut(s) 1032, 1580, 2934
Bsp19I CCATGG 1 cut(s) 1876
BspACI CCGC 3 cut(s) 775, 910, 3261
BspANI GGCC 8 cut(s) 287, 821, 2290, 2986, 3324, 3401, 3501, 3760
BspCNI CTCAG 6 cut(s) 253, 424, 1486, 2602, 2898, 3046
BspHI TCATGA 1 cut(s) 2149
BspLI GGNNCC 7 cut(s) 929, 993, 1821, 1922, 2355, 2590, 3214
BspMAI CTGCAG 3 cut(s) 976, 2784, 3427
BspMI ACCTGC 3 cut(s) 244, 979, 1622
BspQI GCTCTTC 1 cut(s) 949
BspT107I GGYRCC 1 cut(s) 2353
BspTNI GGTCTC 3 cut(s) 13, 1650, 2165
BsrDI GCAATG 4 cut(s) 36, 242, 2897, 3473
BsrI ACTGG 8 cut(s) 162, 1507, 2077, 2202, 2852, 3180, 3186, 3325
BssECI CCNNGG 9 cut(s) 289, 1184, 1399, 1400, 1656, 1876, 1966, 1988, 3338
BssNI GRCGYC 2 cut(s) 846, 3291
BssT1I CCWWGG 4 cut(s) 289, 1184, 1876, 1966
Bst2UI CCWGG 9 cut(s) 348, 440, 989, 1401, 1695, 2844, 3194, 3340, 3702
Bst4CI ACNGT 9 cut(s) 378, 692, 1289, 1564, 1703, 2343, 3147, 3628, 3822
Bst6I CTCTTC 2 cut(s) 949, 2163
BstACI GRCGYC 2 cut(s) 846, 3291
BstAPI GCANNNNNTGC 1 cut(s) 2381
BstC8I GCNNGC 7 cut(s) 1077, 2059, 2358, 2618, 3263, 3411, 3480
BstDEI CTNAG 9 cut(s) 261, 432, 478, 1135, 1473, 2610, 2885, 3033, 3274
BstDSI CCRYGG 1 cut(s) 1876
BstF5I GGATG 6 cut(s) 472, 1871, 1984, 2319, 2525, 3446
BstH2I RGCGCY 1 cut(s) 3070
BstHHI GCGC 3 cut(s) 520, 1154, 3069
BstMAI GTCTC 4 cut(s) 13, 1650, 1781, 2165
BstMWI GCNNNNNNNGC 4 cut(s) 650, 1475, 2381, 2983
BstNI CCWGG 9 cut(s) 348, 440, 989, 1401, 1695, 2844, 3194, 3340, 3702
BstNSI RCATGY 1 cut(s) 1794
BstSFI CTRYAG 3 cut(s) 972, 2780, 3423
BstSLI GKGCMC 2 cut(s) 1580, 2934
BstV2I GAAGAC 4 cut(s) 849, 1644, 2160, 2840
BstX2I RGATCY 7 cut(s) 271, 580, 1144, 1819, 2776, 3383, 3778
BstXI CCANNNNNNTGG 2 cut(s) 2330, 3509
BstYI RGATCY 7 cut(s) 271, 580, 1144, 1819, 2776, 3383, 3778
BsuI GTATCC 2 cut(s) 259, 3200
BsuRI GGCC 8 cut(s) 287, 821, 2290, 2986, 3324, 3401, 3501, 3760
BtgI CCRYGG 1 cut(s) 1876
BtgZI GCGATG 1 cut(s) 923
BtsCI GGATG 6 cut(s) 472, 1871, 1984, 2319, 2525, 3446
BtsI GCAGTG 2 cut(s) 1872, 2569
BtsIMutI CAGTG 5 cut(s) 1872, 2195, 2211, 2569, 2712
BveI ACCTGC 3 cut(s) 244, 979, 1622
Cac8I GCNNGC 7 cut(s) 1077, 2059, 2358, 2618, 3263, 3411, 3480
CaiI CAGNNNCTG 3 cut(s) 1616, 2396, 3782
CciI TCATGA 1 cut(s) 2149
CfoI GCGC 3 cut(s) 520, 1154, 3069
Cfr13I GGNCC 8 cut(s) 286, 442, 820, 1920, 2984, 3213, 3499, 3758
CseI GACGC 2 cut(s) 642, 3280
Csp6I GTAC 7 cut(s) 12, 1488, 1982, 2855, 2960, 3374, 3418
CspCI CAANNNNNGTGG 2 cut(s) 264, 299
CviQI GTAC 7 cut(s) 12, 1488, 1982, 2855, 2960, 3374, 3418
DdeI CTNAG 9 cut(s) 261, 432, 478, 1135, 1473, 2610, 2885, 3033, 3274
DraI TTTAAA 1 cut(s) 1246
DraIII CACNNNGTG 2 cut(s) 1558, 1907
DriI GACNNNNNGTC 1 cut(s) 2341
EaeI YGGCCR 1 cut(s) 3399
Eam1104I CTCTTC 2 cut(s) 949, 2163
Eam1105I GACNNNNNGTC 1 cut(s) 2341
EarI CTCTTC 2 cut(s) 949, 2163
Eco130I CCWWGG 4 cut(s) 289, 1184, 1876, 1966
Eco147I AGGCCT 1 cut(s) 2290
Eco31I GGTCTC 3 cut(s) 13, 1650, 2165
Eco32I GATATC 2 cut(s) 1354, 1542
Eco47I GGWCC 3 cut(s) 442, 1920, 3213
Eco57I CTGAAG 7 cut(s) 137, 2070, 2187, 2604, 2976, 2987, 3317
EcoO109I RGGNCCY 2 cut(s) 442, 1920
EcoRI GAATTC 2 cut(s) 1060, 2641
EcoRII CCWGG 9 cut(s) 346, 438, 987, 1399, 1693, 2842, 3192, 3338, 3700
EcoRV GATATC 2 cut(s) 1354, 1542
EcoT14I CCWWGG 4 cut(s) 289, 1184, 1876, 1966
ErhI CCWWGG 4 cut(s) 289, 1184, 1876, 1966
FaqI GGGAC 5 cut(s) 155, 723, 1417, 1906, 2499
FauI CCCGC 1 cut(s) 3254
FbaI TGATCA 2 cut(s) 225, 747
FokI GGATG 6 cut(s) 479, 1858, 1971, 2306, 2532, 3433
FspI TGCGCA 1 cut(s) 519
GlaI GCGC 3 cut(s) 519, 1153, 3068
GsuI CTGGAG 1 cut(s) 2258
HaeII RGCGCY 1 cut(s) 3070
HaeIII GGCC 8 cut(s) 287, 821, 2290, 2986, 3324, 3401, 3501, 3760
HapII CCGG 4 cut(s) 1498, 1708, 2711, 3717
HgaI GACGC 2 cut(s) 642, 3280
HhaI GCGC 3 cut(s) 520, 1154, 3069
Hin1I GRCGYC 2 cut(s) 846, 3291
Hin6I GCGC 3 cut(s) 518, 1152, 3067
HinP1I GCGC 3 cut(s) 518, 1152, 3067
HincII GTYRAC 1 cut(s) 2233
HindII GTYRAC 1 cut(s) 2233
HindIII AAGCTT 2 cut(s) 1049, 1206
HpaII CCGG 4 cut(s) 1498, 1708, 2711, 3717
Hpy166II GTNNAC 3 cut(s) 1578, 2233, 3692
Hpy8I GTNNAC 3 cut(s) 1578, 2233, 3692
Hpy99I CGWCG 1 cut(s) 2914
HpyCH4III ACNGT 9 cut(s) 378, 692, 1289, 1564, 1703, 2343, 3147, 3628, 3822
HpyCH4IV ACGT 2 cut(s) 359, 846
HpyF10VI GCNNNNNNNGC 4 cut(s) 650, 1475, 2381, 2983
HpyF3I CTNAG 9 cut(s) 261, 432, 478, 1135, 1473, 2610, 2885, 3033, 3274
HpySE526I ACGT 2 cut(s) 359, 846
Hsp92I GRCGYC 2 cut(s) 846, 3291
HspAI GCGC 3 cut(s) 518, 1152, 3067
Ksp22I TGATCA 2 cut(s) 225, 747
LguI GCTCTTC 1 cut(s) 949
LmnI GCTCC 5 cut(s) 244, 959, 2006, 2468, 3837
MaeII ACGT 2 cut(s) 359, 846
MfeI CAATTG 1 cut(s) 830
MflI RGATCY 7 cut(s) 271, 580, 1144, 1819, 2776, 3383, 3778
MhlI GDGCHC 3 cut(s) 1032, 1580, 2934
MlyI GAGTC 7 cut(s) 320, 807, 1558, 2150, 2357, 2447, 3866
MmeI TCCRAC 1 cut(s) 2490
MroXI GAANNNNTTC 1 cut(s) 3146
MslI CAYNNNNRTG 3 cut(s) 3507, 3597, 3797
MspA1I CMGCKG 3 cut(s) 147, 1613, 3261
MspI CCGG 4 cut(s) 1498, 1708, 2711, 3717
MunI CAATTG 1 cut(s) 830
Mva1269I GAATGC 4 cut(s) 479, 540, 1432, 3804
MvaI CCWGG 9 cut(s) 348, 440, 989, 1401, 1695, 2844, 3194, 3340, 3702
MwoI GCNNNNNNNGC 4 cut(s) 650, 1475, 2381, 2983
NciI CCSGG 1 cut(s) 1709
NcoI CCATGG 1 cut(s) 1876
NlaIV GGNNCC 7 cut(s) 929, 993, 1821, 1922, 2355, 2590, 3214
NmeAIII GCCGAG 1 cut(s) 1969
NsbI TGCGCA 1 cut(s) 519
NspI RCATGY 1 cut(s) 1794
PagI TCATGA 1 cut(s) 2149
PaqCI CACCTGC 1 cut(s) 979
PasI CCCWGGG 1 cut(s) 1400
PceI AGGCCT 1 cut(s) 2290
PciI ACATGT 1 cut(s) 1790
PciSI GCTCTTC 1 cut(s) 949
PctI GAATGC 4 cut(s) 479, 540, 1432, 3804
PdmI GAANNNNTTC 1 cut(s) 3146
PfoI TCCNGGA 2 cut(s) 346, 3192
PleI GAGTC 7 cut(s) 319, 806, 1557, 2150, 2356, 2446, 3865
PpsI GAGTC 7 cut(s) 319, 806, 1557, 2150, 2356, 2446, 3865
PpuMI RGGWCCY 2 cut(s) 442, 1920
PscI ACATGT 1 cut(s) 1790
PshBI ATTAAT 1 cut(s) 2178
Psp5II RGGWCCY 2 cut(s) 442, 1920
Psp6I CCWGG 9 cut(s) 346, 438, 987, 1399, 1693, 2842, 3192, 3338, 3700
PspGI CCWGG 9 cut(s) 346, 438, 987, 1399, 1693, 2842, 3192, 3338, 3700
PspN4I GGNNCC 7 cut(s) 929, 993, 1821, 1922, 2355, 2590, 3214
PspPI GGNCC 8 cut(s) 286, 442, 820, 1920, 2984, 3213, 3499, 3758
PspPPI RGGWCCY 2 cut(s) 442, 1920
PstI CTGCAG 3 cut(s) 976, 2784, 3427
PstNI CAGNNNCTG 3 cut(s) 1616, 2396, 3782
PsuI RGATCY 7 cut(s) 271, 580, 1144, 1819, 2776, 3383, 3778
PvuII CAGCTG 2 cut(s) 147, 1613
RsaI GTAC 7 cut(s) 13, 1489, 1983, 2856, 2961, 3375, 3419
RsaNI GTAC 7 cut(s) 12, 1488, 1982, 2855, 2960, 3374, 3418
RseI CAYNNNNRTG 3 cut(s) 3507, 3597, 3797
SapI GCTCTTC 1 cut(s) 949
Sau96I GGNCC 8 cut(s) 286, 442, 820, 1920, 2984, 3213, 3499, 3758
SbfI CCTGCAGG 1 cut(s) 976
ScaI AGTACT 1 cut(s) 2856
SchI GAGTC 7 cut(s) 320, 807, 1558, 2150, 2357, 2447, 3866
SdaI CCTGCAGG 1 cut(s) 976
SduI GDGCHC 3 cut(s) 1032, 1580, 2934
SfcI CTRYAG 3 cut(s) 972, 2780, 3423
SinI GGWCC 3 cut(s) 442, 1920, 3213
SmiMI CAYNNNNRTG 3 cut(s) 3507, 3597, 3797
SmlI CTYRAG 1 cut(s) 3326
SmoI CTYRAG 1 cut(s) 3326
SpeI ACTAGT 2 cut(s) 1679, 1738
Sse8387I CCTGCAGG 1 cut(s) 976
SseBI AGGCCT 1 cut(s) 2290
SsiI CCGC 3 cut(s) 775, 910, 3261
SspI AATATT 1 cut(s) 2866
StuI AGGCCT 1 cut(s) 2290
StyI CCWWGG 4 cut(s) 289, 1184, 1876, 1966
TaaI ACNGT 9 cut(s) 378, 692, 1289, 1564, 1703, 2343, 3147, 3628, 3822
TaiI ACGT 2 cut(s) 362, 849
TaqI TCGA 2 cut(s) 1266, 2623
TatI WGTACW 5 cut(s) 11, 1487, 2854, 2959, 3373
TauI GCSGC 1 cut(s) 778
TscAI CASTG 5 cut(s) 1872, 2202, 2211, 2569, 2712
TspGWI ACGGA 3 cut(s) 839, 3128, 3830
TspRI CASTG 5 cut(s) 1872, 2202, 2211, 2569, 2712
VneI GTGCAC 1 cut(s) 1576
VpaK11BI GGWCC 3 cut(s) 442, 1920, 3213
VspI ATTAAT 1 cut(s) 2178
XapI RAATTY 8 cut(s) 220, 249, 365, 979, 1060, 2641, 2716, 3254
XbaI TCTAGA 1 cut(s) 2239
XceI RCATGY 1 cut(s) 1794
XmnI GAANNNNTTC 1 cut(s) 3146
ZraI GACGTC 1 cut(s) 847
ZrmI AGTACT 1 cut(s) 2856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.