pycom01g13800
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0005694
Physical Location & Seq
Forward (+)
14175400 .. 14179258
3859 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g13800.3

Sequence Viewer

Length: 2523 bp
ATGGGTGGTTCCACTGGTTTAGGTGCTGGCCAGAAATGTGAGAGAGAGAACTCGTTGGGCTCAATTGATTGGAAGCCTCTTAAATGGACAAGGTCTGGAAGCTTGTCTTCTCGAGTTTCGGGTTTCAGCCATTTAAGTAGCTCAAAAAGCATGGGGCCCATTGATTCCAATGAAGCAATGGTTGATTCACAGCCAAAAAATGCCACTCCAGTGCAGTCTCCTTCGGGAGAAGCTACTACTGGTGTGACATCTGCTGCATCATCAGAGGAAACAACTTCTAGGAAGAAGCCACGCCTTGGATGGGGTGAGGGATTGGCAAAGTATGAGAAAAAGAAAGTCGAGGTCCCTGATGCTAGCATGAACAATGATGGAGCTGTCTGTTCTTTTGGTAACACTGAACCTGCTCATTCTTTGAGTTCAAGCTTGCCAGATAAAAGCCCTAGAGTCACAATTTTCTTGGATTGTGCATCTCCTGCAACTCCATCCTCCGTTGTTTGCAGTTCTTCTCCAGGTGTGGAGGAGAAATCATTTTGCAAGGCAGTAAATATTGATAACGATATTAGAAACGTTTGTGGTTCCCCAGGTCATATGTCCCAGAGTCATCATGAGGGATTCTCATTCCAATTGGAAAAGTTGGATAGTAATTCTATAGTTAACTTGGACTCATCACTACTGGAATTGCTTCAGTCTGATGATCCAAGTTCTGTGGATTCTAGTATCCAGAGGCCTACTGCATTGAACAAGTTGCTCATATGGAAAGGTGAGATTTCAAAAGTACTGGAGGTTACTGAGTCGGAAATTGATTCACTTGAAAACGAACTTAAGGCACTGAACTCTGATTCTGGGGGCAGCTGCCCCCATCCAGCAACTTCTAGTTCTTTGCCTGTGGAGGACAAGGATAAATCTTGCAAAGAACACGTCACAAATTTGATTACTCTGCCTACTGCGTTGCAAATTCATTCTTCTGGGGACACTGATGTGCAGAAAATGTGTGTTGACAACAGGGACCAGGTAGAGTTCTGCGGTATTGTCAACGATGAGGATATTGATAGTCCTGGAACAGCTACATCGAAATTTGTTGAGCCATTACCGTTGGTCTCTTCATCTGATATGATGAATCAAACTGGTTGTTCTGAGGATTGGGATCCAATCCAGACAACCATAGGGGAAGAGACATGCTCAGTGCCCAGCAGATGTACAGAAAAGACGGACCCGTCTACTTGTGGAAATAGTAGCATGCTTTTGGATAAGGAGATAGTTGCACCGGCCTGTGGTGTAGTAGATAAGTTATCTGATTCTATATTTTCGGCCAATAAAGAATTTGCAAGTAGAGCATCTGACATATTTAGTAAGCTGTTACCAAAAGAGCAATATGAGGTTGATCCATCTGGAGTAAGTGTTCCATCATCCTGGAAGAATGATCCATTGATCAAAGAGAAGTTTGCCAAGAGGAAGCAACATCTGAGGTTTATGGAGAGAGTTGTAACCTTAAAATTTAAAGCCTTTCAACACTTGTGGAAGGAAGACATGCATTTGCTTTCCATGCGAAAATATCGTTCAAAATGTCACAAAAACATTGAGTTGAGCTTGCGAGCTACTAATAATGGGCATCAGAAGCATCGATCTTCAATTCGATCTCGATTTTCTACACCTGCAGGAAGTCTGAATCTGGTCCCTACCACAGAGACTATTAATTTCACTAACAAGTTGCTGTCAGATTCCCAAGTCAAGCTGTACCGGAACTCATTGAAGATGCCGGCCTTAATCTTGGACAAAAAGGAGAAGATGGCGACAAGATTTGTTTCTAGTAATGGTTTAGTTGAAGATCCCTGTGCTGTTGAGAATGAAAGGGCTTTGATGAACCCATGGATGCCAGAAGAGAAAGAACTTTTCATCCAAAAGCTAACCATCTATGGGAAGGATTTCAGGAAAATTGCTTCGTTTCTTGATCACAAGACTACTGCTGACTGTGTTGAGTTTTACTACAAAAACCACAAGTCTGATTGCTTTAAGAAAGCAAAGAAGAAACCTGATATGGCTAAACAAGAAAAGTCCTCGGCCAATACCTACTTAATTTCAAATGGGAAAAAGTGGAATCGTGAGATGCATGCTGCTTCCCTTGATATTTTGGGTGCTGCTTCAGCAATTGCAGCTCATGCTGAAAGTAGTACAAGAAATCGACAGACATATTCGAGAAGGTTAATTTTGGGAGGGTACAAGAATACCAATACATCTCATGGTGATGATACCATGGTTGAAAGGCCTTGCAGTTTTGATACTATTGGCAATAAAAGAGAAACAGCTGCTGCTGATGTTTTAGCAGGTATATGTGGCTCGATTTCATCTGAGGCTGTGAGTTCTTGCATCACTAGTTCCATTGATCCTGTTGAGTCTTATCGGGAGTGGAAGTGCCAGAAAGTGGATTCCGTAGTAAGGCGACCTTTGACACCTGATGTAATGCATAATGTGGATGATGAGACTTGCTCAGACGAAAGTTGTGGAGAAATGGATCCTTCTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0000226 GO:0000228 GO:0000785 GO:0000790 GO:0000981 GO:0001067 GO:0001085 GO:0001102 GO:0001932 GO:0001933 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003714 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005874 GO:0005876 GO:0006109 GO:0006110 GO:0006139 GO:0006140 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009966 GO:0009968 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010563 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010648 GO:0015630 GO:0016043 GO:0016070 GO:0016922 GO:0017053 GO:0018130 GO:0019216 GO:0019219 GO:0019220 GO:0019222 GO:0019438 GO:0019899 GO:0022402 GO:0022607 GO:0023051 GO:0023057 GO:0030808 GO:0030811 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032368 GO:0032774 GO:0032872 GO:0032873 GO:0032879 GO:0032890 GO:0032991 GO:0033613 GO:0034641 GO:0034645 GO:0034654 GO:0035257 GO:0042325 GO:0042326 GO:0042826 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043269 GO:0043408 GO:0043409 GO:0043467 GO:0043470 GO:0044070 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045892 GO:0045934 GO:0045936 GO:0046328 GO:0046329 GO:0046483 GO:0046966 GO:0048511 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051049 GO:0051171 GO:0051172 GO:0051174 GO:0051193 GO:0051196 GO:0051225 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051427 GO:0060147 GO:0060149 GO:0060255 GO:0060964 GO:0060965 GO:0060966 GO:0060967 GO:0060968 GO:0060969 GO:0062012 GO:0065007 GO:0070013 GO:0070302 GO:0070303 GO:0070920 GO:0070925 GO:0071704 GO:0071840 GO:0072361 GO:0072362 GO:0072367 GO:0072368 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0097659 GO:0098679 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1900371 GO:1900402 GO:1900542 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902531 GO:1902532 GO:1902679 GO:1903506 GO:1903507 GO:1903578 GO:1903798 GO:1903799 GO:1905952 GO:2000112 GO:2000113 GO:2000191 GO:2001141 GO:2001169
KEGG Pathways
Metabolic & Signaling
ko01522 ko04919 ko05202 map01522 map04919 map05202
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

841

Amino Acids

92.07

Weight (kDa)

5.94

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1660
AasI GACNNNNNNGTC 1 cut(s) 1213
Acc36I ACCTGC 3 cut(s) 409, 1660, 2312
AccB7I CCANNNNNTGG 2 cut(s) 296, 2419
AccI GTMKAC 1 cut(s) 1217
AciI CCGC 1 cut(s) 1023
AclI AACGTT 1 cut(s) 567
AclWI GGATC 9 cut(s) 689, 1139, 1152, 1376, 1415, 1820, 2375, 2504, 2517
AcoI YGGCCR 3 cut(s) 28, 1308, 2058
AcsI RAATTY 5 cut(s) 925, 954, 1073, 1319, 1493
AcuI CTGAAG 2 cut(s) 668, 2124
AfaI GTAC 5 cut(s) 777, 1198, 1736, 2170, 2216
AfiI CCNNNNNNNGG 6 cut(s) 296, 301, 1271, 1914, 2419, 2433
AflII CTTAAG 1 cut(s) 821
AflIII ACRYGT 1 cut(s) 916
AhlI ACTAGT 1 cut(s) 2369
AjiI CACGTC 1 cut(s) 919
AjnI CCWGG 5 cut(s) 508, 580, 1008, 1054, 1409
AleI CACNNNNGTG 2 cut(s) 209, 977
AloI GAACNNNNNNTCC 4 cut(s) 1383, 1415, 1878, 1910
Alw26I GTCTC 5 cut(s) 222, 1102, 1166, 1679, 2471
AlwI GGATC 9 cut(s) 689, 1139, 1152, 1376, 1415, 1820, 2375, 2504, 2517
AlwNI CAGNNNCTG 1 cut(s) 2306
Ama87I CYCGRG 1 cut(s) 111
AoxI GGCC 8 cut(s) 28, 155, 725, 1266, 1308, 1758, 2058, 2261
ApaI GGGCCC 1 cut(s) 159
ApeKI GCWGC 8 cut(s) 254, 849, 852, 2111, 2135, 2150, 2303, 2306
ApoI RAATTY 5 cut(s) 925, 954, 1073, 1319, 1493
ArsI GACNNNNNNTTYG 2 cut(s) 903, 935
AseI ATTAAT 1 cut(s) 1692
Asp700I GAANNNNTTC 2 cut(s) 681, 1922
AspS9I GGNCC 6 cut(s) 155, 156, 343, 1006, 1210, 1672
AsuHPI GGTGA 3 cut(s) 317, 773, 2252
AsuNHI GCTAGC 1 cut(s) 353
AvaI CYCGRG 1 cut(s) 111
AvaII GGWCC 4 cut(s) 343, 1006, 1210, 1672
BaeGI GKGCMC 2 cut(s) 159, 1188
BaeI ACNNNNGTAYC 2 cut(s) 2238, 2271
BalI TGGCCA 1 cut(s) 30
BamHI GGATCC 2 cut(s) 1144, 2509
BanII GRGCYC 2 cut(s) 62, 159
BbsI GAAGAC 2 cut(s) 99, 1530
BbvI GCAGC 8 cut(s) 241, 839, 861, 2098, 2122, 2162, 2290, 2293
BccI CCATC 8 cut(s) 294, 362, 490, 867, 1393, 1411, 1780, 1916
BciT130I CCWGG 5 cut(s) 510, 582, 1010, 1056, 1411
BciVI GTATCC 1 cut(s) 728
BclI TGATCA 2 cut(s) 1428, 1948
BcoDI GTCTC 5 cut(s) 222, 1102, 1166, 1679, 2471
BcuI ACTAGT 1 cut(s) 2369
BfaI CTAG 8 cut(s) 279, 354, 441, 714, 873, 1806, 2370, 2521
BfmI CTRYAG 2 cut(s) 648, 1653
BfrI CTTAAG 1 cut(s) 821
BfuAI ACCTGC 3 cut(s) 409, 1660, 2312
BfuI GTATCC 1 cut(s) 728
BisI GCNGC 8 cut(s) 255, 850, 853, 2112, 2136, 2151, 2304, 2307
BlsI GCNGC 8 cut(s) 256, 851, 854, 2113, 2137, 2152, 2305, 2308
BmcAI AGTACT 1 cut(s) 777
Bme1390I CCNGG 5 cut(s) 510, 582, 1010, 1056, 1411
Bme18I GGWCC 4 cut(s) 343, 1006, 1210, 1672
BmeT110I CYCGRG 1 cut(s) 111
BmgBI CACGTC 1 cut(s) 919
BmgT120I GGNCC 6 cut(s) 155, 156, 343, 1006, 1210, 1672
BmrFI CCNGG 5 cut(s) 510, 582, 1010, 1056, 1411
BmtI GCTAGC 1 cut(s) 357
BpiI GAAGAC 2 cut(s) 99, 1530
BplI GAGNNNNNCTC 6 cut(s) 599, 631, 1163, 1195, 2468, 2500
BpmI CTGGAG 4 cut(s) 192, 492, 800, 1410
Bsa29I ATCGAT 1 cut(s) 1621
BsaBI GATNNNNATC 1 cut(s) 1143
BsaI GGTCTC 1 cut(s) 1102
BsaJI CCNNGG 5 cut(s) 295, 580, 1865, 2055, 2250
BsaWI WCCGGW 1 cut(s) 1737
BsaXI ACNNNNNCTCC 4 cut(s) 1383, 1413, 2393, 2423
Bsc4I CCNNNNNNNGG 6 cut(s) 296, 301, 1271, 1914, 2419, 2433
Bse118I RCCGGY 2 cut(s) 1264, 1756
Bse1I ACTGG 6 cut(s) 19, 209, 244, 678, 783, 1129
Bse3DI GCAATG 1 cut(s) 183
Bse8I GATNNNNATC 1 cut(s) 1143
BseBI CCWGG 5 cut(s) 510, 582, 1010, 1056, 1411
BseCI ATCGAT 1 cut(s) 1621
BseDI CCNNGG 5 cut(s) 295, 580, 1865, 2055, 2250
BseGI GGATG 7 cut(s) 305, 482, 859, 1406, 1875, 1893, 2476
BseJI GATNNNNATC 1 cut(s) 1143
BseLI CCNNNNNNNGG 6 cut(s) 296, 301, 1271, 1914, 2419, 2433
BseMI GCAATG 1 cut(s) 183
BseMII CTCAG 6 cut(s) 780, 1125, 1194, 1454, 2337, 2499
BseNI ACTGG 6 cut(s) 19, 209, 244, 678, 783, 1129
BseRI GAGGAG 1 cut(s) 533
BseSI GKGCMC 2 cut(s) 159, 1188
BseXI GCAGC 8 cut(s) 241, 839, 861, 2098, 2122, 2162, 2290, 2293
BseYI CCCAGC 1 cut(s) 1187
BsgI GTGCAG 2 cut(s) 233, 1001
BshFI GGCC 8 cut(s) 30, 157, 727, 1268, 1310, 1760, 2060, 2263
BshVI ATCGAT 1 cut(s) 1621
BsiHKCI CYCGRG 1 cut(s) 111
BsiSI CCGG 3 cut(s) 1265, 1738, 1757
BslFI GGGAC 5 cut(s) 329, 577, 983, 1019, 1658
BslI CCNNNNNNNGG 6 cut(s) 296, 301, 1271, 1914, 2419, 2433
BsmAI GTCTC 5 cut(s) 222, 1102, 1166, 1679, 2471
BsmFI GGGAC 5 cut(s) 329, 577, 983, 1019, 1658
BsnI GGCC 8 cut(s) 30, 157, 727, 1268, 1310, 1760, 2060, 2263
Bso31I GGTCTC 1 cut(s) 1102
BsoBI CYCGRG 1 cut(s) 111
Bsp120I GGGCCC 1 cut(s) 155
Bsp1286I GDGCHC 3 cut(s) 62, 159, 1188
Bsp1407I TGTACA 1 cut(s) 1196
Bsp19I CCATGG 2 cut(s) 1865, 2250
BspACI CCGC 1 cut(s) 1023
BspANI GGCC 8 cut(s) 30, 157, 727, 1268, 1310, 1760, 2060, 2263
BspCNI CTCAG 6 cut(s) 781, 1126, 1193, 1455, 2338, 2498
BspDI ATCGAT 1 cut(s) 1621
BspHI TCATGA 1 cut(s) 604
BspMAI CTGCAG 1 cut(s) 1657
BspMI ACCTGC 3 cut(s) 409, 1660, 2312
BspOI GCTAGC 1 cut(s) 357
BspPI GGATC 9 cut(s) 689, 1139, 1152, 1376, 1415, 1820, 2375, 2504, 2517
BspTI CTTAAG 1 cut(s) 821
BspTNI GGTCTC 1 cut(s) 1102
BsrDI GCAATG 1 cut(s) 183
BsrFI RCCGGY 2 cut(s) 1264, 1756
BsrGI TGTACA 1 cut(s) 1196
BsrI ACTGG 6 cut(s) 19, 209, 244, 678, 783, 1129
BssAI RCCGGY 2 cut(s) 1264, 1756
BssECI CCNNGG 5 cut(s) 295, 580, 1865, 2055, 2250
BssT1I CCWWGG 3 cut(s) 295, 1865, 2250
Bst2UI CCWGG 5 cut(s) 510, 582, 1010, 1056, 1411
Bst4CI ACNGT 2 cut(s) 1092, 1970
Bst6I CTCTTC 3 cut(s) 1105, 1164, 1872
BstAFI CTTAAG 1 cut(s) 821
BstAPI GCANNNNNTGC 2 cut(s) 473, 2156
BstAUI TGTACA 1 cut(s) 1196
BstC8I GCNNGC 8 cut(s) 28, 355, 425, 1238, 1589, 1593, 1758, 2109
BstDEI CTNAG 6 cut(s) 789, 1134, 1180, 1463, 2346, 2485
BstDSI CCRYGG 2 cut(s) 1865, 2250
BstF5I GGATG 7 cut(s) 305, 482, 859, 1406, 1875, 1893, 2476
BstMAI GTCTC 5 cut(s) 222, 1102, 1166, 1679, 2471
BstMWI GCNNNNNNNGC 8 cut(s) 147, 473, 1331, 1543, 1615, 2141, 2150, 2156
BstNI CCWGG 5 cut(s) 510, 582, 1010, 1056, 1411
BstNSI RCATGY 4 cut(s) 1179, 1240, 1531, 2111
BstSCI CCNGG 5 cut(s) 508, 580, 1008, 1054, 1409
BstSFI CTRYAG 2 cut(s) 648, 1653
BstSLI GKGCMC 2 cut(s) 159, 1188
BstV1I GCAGC 8 cut(s) 241, 839, 861, 2098, 2122, 2162, 2290, 2293
BstV2I GAAGAC 2 cut(s) 99, 1530
BstX2I RGATCY 3 cut(s) 1144, 1825, 2509
BstXI CCANNNNNNTGG 1 cut(s) 1410
BstYI RGATCY 3 cut(s) 1144, 1825, 2509
Bsu15I ATCGAT 1 cut(s) 1621
BsuI GTATCC 1 cut(s) 728
BsuRI GGCC 8 cut(s) 30, 157, 727, 1268, 1310, 1760, 2060, 2263
BsuTUI ATCGAT 1 cut(s) 1621
BtgI CCRYGG 2 cut(s) 1865, 2250
BtrI CACGTC 1 cut(s) 919
BtsCI GGATG 7 cut(s) 305, 482, 859, 1406, 1875, 1893, 2476
BtsIMutI CAGTG 6 cut(s) 12, 216, 393, 827, 972, 1188
BveI ACCTGC 3 cut(s) 409, 1660, 2312
Cac8I GCNNGC 8 cut(s) 28, 355, 425, 1238, 1589, 1593, 1758, 2109
CaiI CAGNNNCTG 1 cut(s) 2306
CciI TCATGA 1 cut(s) 604
Cfr10I RCCGGY 2 cut(s) 1264, 1756
Cfr13I GGNCC 6 cut(s) 155, 156, 343, 1006, 1210, 1672
ClaI ATCGAT 1 cut(s) 1621
CsiI ACCWGGT 1 cut(s) 1008
Csp6I GTAC 5 cut(s) 776, 1197, 1735, 2169, 2215
CspCI CAANNNNNGTGG 4 cut(s) 687, 722, 1496, 1531
CviQI GTAC 5 cut(s) 776, 1197, 1735, 2169, 2215
DdeI CTNAG 6 cut(s) 789, 1134, 1180, 1463, 2346, 2485
DraI TTTAAA 1 cut(s) 1498
DrdI GACNNNNNNGTC 1 cut(s) 1213
DseDI GACNNNNNNGTC 1 cut(s) 1213
EaeI YGGCCR 3 cut(s) 28, 1308, 2058
Eam1104I CTCTTC 3 cut(s) 1105, 1164, 1872
EarI CTCTTC 3 cut(s) 1105, 1164, 1872
Eco130I CCWWGG 3 cut(s) 295, 1865, 2250
Eco147I AGGCCT 2 cut(s) 727, 2263
Eco24I GRGCYC 2 cut(s) 62, 159
Eco31I GGTCTC 1 cut(s) 1102
Eco47I GGWCC 4 cut(s) 343, 1006, 1210, 1672
Eco57I CTGAAG 2 cut(s) 668, 2124
Eco88I CYCGRG 1 cut(s) 111
EcoO109I RGGNCCY 2 cut(s) 155, 343
EcoRII CCWGG 5 cut(s) 508, 580, 1008, 1054, 1409
EcoT14I CCWWGG 3 cut(s) 295, 1865, 2250
EcoT22I ATGCAT 3 cut(s) 1533, 2109, 2463
EcoT38I GRGCYC 2 cut(s) 62, 159
ErhI CCWWGG 3 cut(s) 295, 1865, 2250
FalI AAGNNNNNCTT 4 cut(s) 91, 123, 2425, 2457
FaqI GGGAC 5 cut(s) 329, 577, 983, 1019, 1658
FauNDI CATATG 2 cut(s) 588, 752
FbaI TGATCA 2 cut(s) 1428, 1948
FblI GTMKAC 1 cut(s) 1217
Fnu4HI GCNGC 8 cut(s) 255, 850, 853, 2112, 2136, 2151, 2304, 2307
FokI GGATG 7 cut(s) 312, 469, 846, 1393, 1880, 1882, 2483
FriOI GRGCYC 2 cut(s) 62, 159
Fsp4HI GCNGC 8 cut(s) 255, 850, 853, 2112, 2136, 2151, 2304, 2307
FspBI CTAG 8 cut(s) 279, 354, 441, 714, 873, 1806, 2370, 2521
GluI GCNGC 8 cut(s) 255, 850, 853, 2112, 2136, 2151, 2304, 2307
GsaI CCCAGC 1 cut(s) 1191
GsuI CTGGAG 4 cut(s) 192, 492, 800, 1410
HaeIII GGCC 8 cut(s) 30, 157, 727, 1268, 1310, 1760, 2060, 2263
HapII CCGG 3 cut(s) 1265, 1738, 1757
HincII GTYRAC 3 cut(s) 655, 997, 1033
HindII GTYRAC 3 cut(s) 655, 997, 1033
HindIII AAGCTT 2 cut(s) 100, 421
HpaI GTTAAC 1 cut(s) 655
HpaII CCGG 3 cut(s) 1265, 1738, 1757
HphI GGTGA 3 cut(s) 317, 773, 2252
Hpy166II GTNNAC 4 cut(s) 655, 997, 1033, 1218
Hpy8I GTNNAC 4 cut(s) 655, 997, 1033, 1218
HpyAV CCTTC 5 cut(s) 231, 1513, 1912, 2190, 2523
HpyCH4III ACNGT 2 cut(s) 1092, 1970
HpyCH4IV ACGT 2 cut(s) 567, 918
HpyF10VI GCNNNNNNNGC 8 cut(s) 147, 473, 1331, 1543, 1615, 2141, 2150, 2156
HpyF3I CTNAG 6 cut(s) 789, 1134, 1180, 1463, 2346, 2485
HpySE526I ACGT 2 cut(s) 567, 918
KroI GCCGGC 1 cut(s) 1756
KroNI GCCGGC 1 cut(s) 1758
Ksp22I TGATCA 2 cut(s) 1428, 1948
KspAI GTTAAC 1 cut(s) 655
LmnI GCTCC 1 cut(s) 371
Lsp1109I GCAGC 8 cut(s) 241, 839, 861, 2098, 2122, 2162, 2290, 2293
MabI ACCWGGT 1 cut(s) 1008
MaeI CTAG 8 cut(s) 279, 354, 441, 714, 873, 1806, 2370, 2521
MaeII ACGT 2 cut(s) 567, 918
MaeIII GTNAC 8 cut(s) 244, 389, 445, 784, 919, 1356, 1483, 1565
MfeI CAATTG 3 cut(s) 63, 623, 2145
MflI RGATCY 3 cut(s) 1144, 1825, 2509
MhlI GDGCHC 3 cut(s) 62, 159, 1188
MlsI TGGCCA 1 cut(s) 30
MluNI TGGCCA 1 cut(s) 30
MlyI GAGTC 5 cut(s) 453, 607, 656, 800, 2399
MmeI TCCRAC 2 cut(s) 615, 774
Mox20I TGGCCA 1 cut(s) 30
Mph1103I ATGCAT 3 cut(s) 1533, 2109, 2463
MroNI GCCGGC 1 cut(s) 1756
MroXI GAANNNNTTC 2 cut(s) 681, 1922
MscI TGGCCA 1 cut(s) 30
MslI CAYNNNNRTG 3 cut(s) 209, 977, 2241
Msp20I TGGCCA 1 cut(s) 30
MspA1I CMGCKG 2 cut(s) 852, 2303
MspCI CTTAAG 1 cut(s) 821
MspI CCGG 3 cut(s) 1265, 1738, 1757
MspR9I CCNGG 5 cut(s) 510, 582, 1010, 1056, 1411
MunI CAATTG 3 cut(s) 63, 623, 2145
MvaI CCWGG 5 cut(s) 510, 582, 1010, 1056, 1411
MwoI GCNNNNNNNGC 8 cut(s) 147, 473, 1331, 1543, 1615, 2141, 2150, 2156
NaeI GCCGGC 1 cut(s) 1758
NcoI CCATGG 2 cut(s) 1865, 2250
NdeI CATATG 2 cut(s) 588, 752
NgoMIV GCCGGC 1 cut(s) 1756
NheI GCTAGC 1 cut(s) 353
NmeAIII GCCGAG 1 cut(s) 2036
NmuCI GTSAC 4 cut(s) 244, 445, 919, 1565
NsiI ATGCAT 3 cut(s) 1533, 2109, 2463
NspI RCATGY 4 cut(s) 1179, 1240, 1531, 2111
OliI CACNNNNGTG 2 cut(s) 209, 977
PaeI GCATGC 2 cut(s) 1240, 2111
PaeR7I CTCGAG 1 cut(s) 111
PagI TCATGA 1 cut(s) 604
PaqCI CACCTGC 1 cut(s) 1660
PceI AGGCCT 2 cut(s) 727, 2263
PdiI GCCGGC 1 cut(s) 1758
PdmI GAANNNNTTC 2 cut(s) 681, 1922
PflFI GACNNNGTC 1 cut(s) 91
PflMI CCANNNNNTGG 2 cut(s) 296, 2419
PfoI TCCNGGA 2 cut(s) 1054, 1409
PkrI GCNGC 8 cut(s) 256, 851, 854, 2113, 2137, 2152, 2305, 2308
PleI GAGTC 5 cut(s) 452, 606, 656, 799, 2398
PpsI GAGTC 5 cut(s) 452, 606, 656, 799, 2398
PpuMI RGGWCCY 1 cut(s) 343
PshBI ATTAAT 1 cut(s) 1692
Psp1406I AACGTT 1 cut(s) 567
Psp5II RGGWCCY 1 cut(s) 343
Psp6I CCWGG 5 cut(s) 508, 580, 1008, 1054, 1409
PspFI CCCAGC 1 cut(s) 1187
PspGI CCWGG 5 cut(s) 508, 580, 1008, 1054, 1409
PspOMI GGGCCC 1 cut(s) 155
PspPI GGNCC 6 cut(s) 155, 156, 343, 1006, 1210, 1672
PspPPI RGGWCCY 1 cut(s) 343
PstI CTGCAG 1 cut(s) 1657
PstNI CAGNNNCTG 1 cut(s) 2306
PsuI RGATCY 3 cut(s) 1144, 1825, 2509
PsyI GACNNNGTC 1 cut(s) 91
PvuII CAGCTG 2 cut(s) 852, 2303
RsaI GTAC 5 cut(s) 777, 1198, 1736, 2170, 2216
RsaNI GTAC 5 cut(s) 776, 1197, 1735, 2169, 2215
RseI CAYNNNNRTG 3 cut(s) 209, 977, 2241
SatI GCNGC 8 cut(s) 255, 850, 853, 2112, 2136, 2151, 2304, 2307
Sau96I GGNCC 6 cut(s) 155, 156, 343, 1006, 1210, 1672
SbfI CCTGCAGG 1 cut(s) 1657
ScaI AGTACT 1 cut(s) 777
SchI GAGTC 5 cut(s) 453, 607, 656, 800, 2399
ScrFI CCNGG 5 cut(s) 510, 582, 1010, 1056, 1411
SdaI CCTGCAGG 1 cut(s) 1657
SduI GDGCHC 3 cut(s) 62, 159, 1188
SexAI ACCWGGT 1 cut(s) 1008
SfcI CTRYAG 2 cut(s) 648, 1653
Sfr274I CTCGAG 1 cut(s) 111
SinI GGWCC 4 cut(s) 343, 1006, 1210, 1672
SlaI CTCGAG 1 cut(s) 111
SmiMI CAYNNNNRTG 3 cut(s) 209, 977, 2241
SmlI CTYRAG 2 cut(s) 111, 821
SmoI CTYRAG 2 cut(s) 111, 821
SpeI ACTAGT 1 cut(s) 2369
SphI GCATGC 2 cut(s) 1240, 2111
Sse8387I CCTGCAGG 1 cut(s) 1657
SseBI AGGCCT 2 cut(s) 727, 2263
SsiI CCGC 1 cut(s) 1023
SspI AATATT 1 cut(s) 547
SspMI CTAG 8 cut(s) 279, 354, 441, 714, 873, 1806, 2370, 2521
StuI AGGCCT 2 cut(s) 727, 2263
StyD4I CCNGG 5 cut(s) 508, 580, 1008, 1054, 1409
StyI CCWWGG 3 cut(s) 295, 1865, 2250
TaaI ACNGT 2 cut(s) 1092, 1970
TaiI ACGT 2 cut(s) 570, 921
TaqI TCGA 9 cut(s) 112, 339, 1070, 1621, 1633, 1639, 2179, 2192, 2336
TatI WGTACW 3 cut(s) 775, 1196, 2168
TscAI CASTG 6 cut(s) 19, 216, 400, 834, 979, 1188
TseFI GTSAC 4 cut(s) 244, 445, 919, 1565
TseI GCWGC 8 cut(s) 254, 849, 852, 2111, 2135, 2150, 2303, 2306
Tsp45I GTSAC 4 cut(s) 244, 445, 919, 1565
TspDTI ATGAA 9 cut(s) 186, 374, 947, 1092, 1130, 1860, 1874, 1882, 2331
TspGWI ACGGA 3 cut(s) 478, 1223, 2416
TspRI CASTG 6 cut(s) 19, 216, 400, 834, 979, 1188
Tth111I GACNNNGTC 1 cut(s) 91
Van91I CCANNNNNTGG 2 cut(s) 296, 2419
Vha464I CTTAAG 1 cut(s) 821
VpaK11BI GGWCC 4 cut(s) 343, 1006, 1210, 1672
VspI ATTAAT 1 cut(s) 1692
XapI RAATTY 5 cut(s) 925, 954, 1073, 1319, 1493
XceI RCATGY 4 cut(s) 1179, 1240, 1531, 2111
XcmI CCANNNNNNNNNTGG 2 cut(s) 175, 297
XhoI CTCGAG 1 cut(s) 111
XmiI GTMKAC 1 cut(s) 1217
XmnI GAANNNNTTC 2 cut(s) 681, 1922
XspI CTAG 8 cut(s) 279, 354, 441, 714, 873, 1806, 2370, 2521
ZrmI AGTACT 1 cut(s) 777
Zsp2I ATGCAT 3 cut(s) 1533, 2109, 2463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.