Prupe.2G215600_v2.0.a1
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0005694
Physical Location & Seq
Forward (+)
24635249 .. 24643038
7790 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G215600.2

Sequence Viewer

Length: 5166 bp
ATGCCGCCAGAACCATTGCCTTGGGATCGGAAAGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAGTCCCTTGGCTCTGTGGCACGATGGAGGGACTCGCCCCATCATGCACCTCGCGACTTCAATCGTTGGCCTTCAGCCGATTTTCGCAGACCACCAGGTCATGGTAAGCAGGGTGGTTGGCACCTATTTTCCGAGGATTCTGGTCATGGCTATGCATCTTCTCGGTCTGGTGATAAGATGCTGGAAGATGAGAGCTGCCGACCATCATTTTCGCGTGGAGATGGAAGGTATGGTAGGAACAGCAGGGATAACAGAGGGTCTTACAGCCAGAGGGAATGTAAAGGTCATTCTTGGGAAACCAGCAGTGGGTCTCCAAACACACCGGGCAGGCCAAATGACGTGATTAATGAACAAAGGACGCAGGATGATATGCTGACATACTCATCTCATCAGCATTCTGACTTTGGAAGCACATGGGATCAGATTCAATTGAAAGACCAGCTTGATAGAATGGGCGGTTCTACTGGTCTAGGTGCTGGCCAGAAATGTGAGAGAGAGAACTCGTTAGGCTCAATTGATTGGAAGCCCCTTAAATGGACGCGGTCTGGAAGCATGTCTTCTCGGGGTTCAGGTTTCAGCCATTCAAGTAGCTCAAAGAGCATTGGGGCCATTGATTTCAATGAAGCAAAGGTTGAGTCACAGCCAAAAAATGCCACTCCGGTGCAGTCTCCTTCAGGAGAAGCTACTACCTGTGTGACATCTGCTGCCCCATCAGAGGAAACAACTTCTAGGAAGAAGCCGCGCCTTGGATGGGGTGAGGGATTGGCAAAGTATGAGAAAAAGAAAGTCGAGGTCCCTGATGGAAGCATGAACAAAGATGGGGCTGTTTGTTCTGTTGGTAACATGGAGCCGGTCCATTCTCTGAGTTCAAATTTGGCTGATAAAAGCCCTAGAGTTACAGTATTCTCAGATTGTGCATCTCCTGCAACTCCATCCTCTGTAGCTTGCAGTTCCTCTCCAGGTGTGGAGGAGAAATCATTTGGCAAGACAGCAAATGTTGACAACAATAATAGAAACTTTTGTGGTTCCCCTAGTCCTATGTCTCAGAGTCATCATGAGGGATTCACATTCAATTTGGAAAAGTTGGATTGCAATTCTATAGCTAATTTGGGCTCATCACTACGGGAATTGCTTCAATCTGATGACCCAAGTTCAGTGGATTCTGGTATTGTGAGGCCTACTGCAATGAACAAGTTACTTATATGGAAAGGTGAAATTTCGAAGGTGTTGGAAGTGACAGAGTCAGAAATTGATTCACTTGAAAACGAGCTTAAAGTATTGAACTCTGATTCTGGGGCCAGCTGTCCACGTCCAGCAACTTCTAGTTCTTTGCCTGTGGAGGACAATGATAAATCTTTCAAAGAACAGGTTACTGTCACAAATTTGATCACTCGGCCTGCTCCATTACAAATTCATTCTTCTGGGGACGCTGATGTGGAGAAGATGTGTCTTGGTAATGGTGACCAGGTAGAATTTTGTGGTATTGTTAAGGATGAGGATATTGATAGTCCTGGAACAGCGACGTCGAAATTTGTTGAACCATTACTAAAGGTGGTTTCTTCATCGGATGTGATGAGTCACAATGATTGTTCTGGGGATTTGGATCCAATTGAAACGACCAAAGGGGAAGCAAAATGCCTAGTGCCAGGAAAGGATGAAGTAAAGACTGACCTGTCTGCTTGTGGAAATAGTAGCATGCTTTTGGGTAGTGAGATAGTTGCACCTGTTTCTGGTGGTTTGGGTTTTTGTTTTAGTGTAGTTGATACGATATGCAATTCTATATGTTCTTCCAATAAAGAATCTGCAAATAGATCATTTGAAGTATTTAATAAGCTGTTACCAAGAGAGCACTACAAGGTTGATATATCTGGAGTTAGTATTTCCTCATCCGGGAAGAATGATTCGTTGATCAAAGAGAAGTTCGCCATGAGGAAGCGGCGTTTAAGGTTTATGGAGAGAGTCTTAACCTTAAAATATAAAGCCTTTCAACACCTGTGGAAGGAAGACTTGCGTTTGCTTTCCATACGAAAATATCGTCCGAAGTCTCACAAAAAATTTGAATTAAGCTTGCGAGCAACAAATAATGGGTATCAGAAGCATCGCTCTTCTATTCGATCTCGTTTTTCTACACCTGCAGGAAATCTGAGCTTGGTCCCGACTACAGAGATCATTAATTTTACCAACAAGTTGCTGTCAGATTCCCAAGTCAAGCGTTATAGGAACTCATTGAAGATGCCAGCCTTAATCTTGGACAAGAAGGAGAAGATGGTGACGAGGTTTATTTCTAGTAATGGCTTAGTTGAAGATCCCTGTGTTGTTGAGAAGGAAAGGGCATTGATGAACCCATGGACGCCAGAAGAGAAAGAGCTGTTCATTGAAAAGCTTACCACATGCGGGAAGGATTTCAGAAAAATTGCTTCTTTTCTTGATCATAAGACGACTGCTGACTGTGTTGAGTTCTACTACAAACATCACAAATCTGTTTGTTTTGAGAAAACAAAGAAGAAGGCTGATATGACTAAGCAAGGAAAGTCTTCAGCTAAGACCTACCTAATTTCAAATGGGAAAAAATGGAATCGTGAGATGAATGCTGCATCCCTTGATATTTTAGGTGCTGCTTCTGCAATTGCAGCTCATGCCGATGGTAGCACAAGATCTCGACAGGCATTTTCAGGAAGGTTATATTTGGGAGGGTACAGGAATACTAATCCATCACGAGGTGATGACACCACTGTCGAAAGGTCTTGCAGTTTTGATGCTATTGGGAATGAAAGAGAAACAGTTGCTGCTGATGTTTTAGCAGGTATATGTGGCTCGCTGTCATCTGAGGCTGTGAGTTCTTGCATCACTAGTTCTATTGATCCTGGTGAGGGTTACCGAGAATGGAAGTGCCAGAAAGTGGATTCGCTAGCAAGGCGACCTTTGACGCCTGATGTTATGCAGAATGTTGATGATGAGACTTGCTCAGAGGAAAGTTGTGGAGAAATGGATCCTTCTGACTGGACAGATGCAGAGAAGTCTAGCTTTATACAGGCAGTGTCATCCTATGGCAAGGATTTTGCTATGATCTCACGATGTGTTCGAACGAGGTCCCAACATCAATGCAAGGTTTTCTTTAGTAAAGCTCGAAAGTGCCTTGGGCTTGATTTGGTACATCCTGTGGCTGGAAATGGAACATCTGTTGGTGACGATGTTAATGGAGGTGGGAGTGATACTGAAGATGCCTGTGTTCTGGAAACTGGTTCAGGTATTTCCAGTGATAAGTCAGGGTGTAGAATGAATGAGGACATGCCGTTGTCTGTCATTAACATGGATGATGAATCTGATCCTGCAGAGACCATGAATTTGCAAACAGGTCCACTTAGATCAGAGGAAAAAAATGTAATGGGACAATTAGATCATGAAGGTGGCAAGACACTCAAATCTCTGGCGTCTGATGCAGTAGAGACGGAGGATAGGCCTAATCTAGTTTTGGATGATGCCGATTGTGTAAGAGATGCCCAGAAAAGTCGAGTATTCTCTGCAGATGCTCTGAAAGATGATGCGGCTGAAGAGGGAATATTAATTGCAGAATCAGAACCTGTTGGTGGGGGAATCAACTTTGACCCAACTAATCCTGGCATGGATGGGGAAAAATTGATGGGTGAACTTCCTTCTGATGGCAATACAGATACAAGCAGATGCAGCCTACCAGGTTCAGTACACGATTCTAATTCAAGTGGCAATGCTTCTGCCCTGGCTGGTGGTGGTTCTTGTTCAGGTTTCAGTCTTAACCCCGAGTGCCTGCATCAAGTTTCTGTGGGGCTGAATTCTATGCAAAAGCCTTCTGTCATCTCAATGCCACATGAGAATCGTCATGCTCCTGCAGATTCTGTCTCACCAGATTCTGCTAAAATTGAATGCGAAAAAGCCTTTAACCAAGATATTTTGTCGTCAACCCTGGATCTACAGGAGGGTAGAGAGCCTAAATCTGTTGGGATAGATGAGTGTAACAAGCACTTACCCGGTCTTCCAATATATACAAATGTTGAATCCTCCCAGGTTCTCAAGGGCTATCCATTGCAAATGCCAACCAAGAAAGATACTAATGGGGATGTAACGTCTGGTAATTTATCTGAAGTTCAAAACTTTTCAAAGCCAGACAGGAAGATCAATGGTCATTATATGACGAAAGATGGCTTTCTTCAATTTGGTAACTGTAAGCCGCAATGTTCAGAGGTTGATTTTCCCCTTGCTCCCCGAAAGGTAGAACAACCAGTTGGCCCTCCAAAAGCCCATTCATGGAGTTCGTCAGATTCAGATAAACCAAGCCGGAATGGTGATGTGAAACTGTTTGGCAAAATACTCAGCAATCCATCATCCCTGTCCAAGTCAAGTTCCAACATCCATGAGAATGAAGAAAAGGGAGCTCACAACCATAAGTTAAGCAACACGTCATCTAACCTAAAATTCACCGGGCATCACAATGCTGATGGAAATTCTTCTCTCCTGAAGTTTGATTGTAGTAGTTATGTGGGGATTGAGAAGGTTCCCAGGAGGAGTTATGGCTTTTGGGAAGGGAATAAAGTGCATGCTGGTTATCCATCTTTTTCTGATTCAGCTATCTTGCTGGCCAAGTACCCTGCAGCATTTGGCAACTTCCCTACTACCTCTTCCAAAATGGAACAGCAGCCATTGCAGGCGGTTGTCAAGAACAACGATCGGAATATTAATGGTGTATCAGTTTTTCCTTCCAGGGAAATTAGTGGCAGCAATGGAGTTGTGGATTACCCGGTGTTCAGTAGGAGTCGGGATGGTGCTAAAGTGCCCCCATTTACAGTAGATGTGAAGCAGCAGCAGCGGCAAGACGTATTTGATATGCCAAGACGAAATGGGTTTGATACAATTTCGAGTTTACAGCAGCAAGGAAGGGGGATTGTTGGGATGAACGTAGTAGGGAGGGGAGGGATCCTTGTAGGGGGTCCATGTACTGGTGTTTCAGATCCTGTTGCTGCCATAAGAATGCATTATGCAAAAACCGAACAGTATGGGGGGCAGCCGGGGAGCATGATTAGGGAGGAAGAGTCCTGGAGAGGAGGTAAGGGTGATGTAGGAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0000226 GO:0000228 GO:0000785 GO:0000790 GO:0000981 GO:0001067 GO:0001085 GO:0001102 GO:0001932 GO:0001933 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0003712 GO:0003714 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005874 GO:0005876 GO:0006109 GO:0006110 GO:0006139 GO:0006140 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009966 GO:0009968 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010563 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010648 GO:0015630 GO:0016043 GO:0016070 GO:0016922 GO:0017053 GO:0018130 GO:0019216 GO:0019219 GO:0019220 GO:0019222 GO:0019438 GO:0019899 GO:0022402 GO:0022607 GO:0023051 GO:0023057 GO:0030808 GO:0030811 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032368 GO:0032774 GO:0032872 GO:0032873 GO:0032879 GO:0032890 GO:0032991 GO:0033613 GO:0034641 GO:0034645 GO:0034654 GO:0035257 GO:0042325 GO:0042326 GO:0042826 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043269 GO:0043408 GO:0043409 GO:0043467 GO:0043470 GO:0044070 GO:0044085 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045892 GO:0045934 GO:0045936 GO:0046328 GO:0046329 GO:0046483 GO:0046966 GO:0048511 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051049 GO:0051171 GO:0051172 GO:0051174 GO:0051193 GO:0051196 GO:0051225 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051427 GO:0060147 GO:0060149 GO:0060255 GO:0060964 GO:0060965 GO:0060966 GO:0060967 GO:0060968 GO:0060969 GO:0062012 GO:0065007 GO:0070013 GO:0070302 GO:0070303 GO:0070920 GO:0070925 GO:0071704 GO:0071840 GO:0072361 GO:0072362 GO:0072367 GO:0072368 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0097159 GO:0097659 GO:0098679 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1900371 GO:1900402 GO:1900542 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902531 GO:1902532 GO:1902679 GO:1903506 GO:1903507 GO:1903578 GO:1903798 GO:1903799 GO:1905952 GO:2000112 GO:2000113 GO:2000191 GO:2001141 GO:2001169
KEGG Pathways
Metabolic & Signaling
ko01522 ko04919 ko05202 map01522 map04919 map05202
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

1722

Amino Acids

187.41

Weight (kDa)

6.19

Isoelectric Point (pI)

47.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2206
AasI GACNNNNNNGTC 3 cut(s) 162, 1738, 2798
AatII GACGTC 1 cut(s) 1592
Acc36I ACCTGC 2 cut(s) 2206, 2858
AccB1I GGYRCC 1 cut(s) 186
AccB7I CCANNNNNTGG 3 cut(s) 167, 2965, 5036
AccII CGCG 4 cut(s) 120, 280, 607, 808
AcoI YGGCCR 2 cut(s) 544, 4677
AcuI CTGAAG 7 cut(s) 123, 723, 2586, 3303, 3636, 4203, 4577
AcyI GRCGYC 4 cut(s) 1589, 2417, 2993, 3497
AdeI CACNNNGTG 2 cut(s) 2786, 3143
AfaI GTAC 5 cut(s) 2762, 3219, 3768, 4685, 5035
AflIII ACRYGT 1 cut(s) 4497
AhlI ACTAGT 1 cut(s) 2915
AjiI CACGTC 3 cut(s) 406, 1376, 4500
AjuI GAANNNNNNNTTGG 4 cut(s) 4308, 4327, 4340, 4359
AleI CACNNNNGTG 1 cut(s) 725
Alw21I GWGCWC 2 cut(s) 1917, 4477
Alw26I GTCTC 8 cut(s) 381, 738, 1113, 2115, 3017, 3395, 3506, 3946
AlwNI CAGNNNCTG 5 cut(s) 2852, 3647, 3938, 3953, 5051
Ama87I CYCGRG 2 cut(s) 627, 3842
ArsI GACNNNNNNTTYG 6 cut(s) 686, 718, 2086, 2118, 3394, 3426
AseI ATTAAT 4 cut(s) 411, 2238, 3629, 4776
Asp700I GAANNNNTTC 5 cut(s) 35, 1197, 2468, 2599, 4546
AspLEI GCGC 1 cut(s) 810
AspS9I GGNCC 9 cut(s) 672, 859, 919, 1362, 2218, 3156, 3422, 4328, 5027
AsuC2I CCSGG 6 cut(s) 390, 1957, 4071, 4522, 4838, 5106
AsuII TTCGAA 2 cut(s) 1286, 3148
AsuNHI GCTAGC 1 cut(s) 2974
AvaI CYCGRG 2 cut(s) 627, 3842
AvaII GGWCC 6 cut(s) 859, 919, 2218, 3156, 3422, 5027
BaeGI GKGCMC 1 cut(s) 4875
BalI TGGCCA 2 cut(s) 546, 4679
BamHI GGATCC 3 cut(s) 1669, 3055, 5013
BanI GGYRCC 1 cut(s) 186
BanII GRGCYC 2 cut(s) 1181, 4477
BauI CACGAG 2 cut(s) 56, 2781
BbsI GAAGAC 4 cut(s) 615, 2076, 2592, 4067
Bbv12I GWGCWC 2 cut(s) 1917, 4477
BceAI ACGGC 1 cut(s) 3343
BclI TGATCA 3 cut(s) 1452, 1974, 2494
BcnI CCSGG 6 cut(s) 390, 1957, 4071, 4522, 4838, 5106
BcoDI GTCTC 8 cut(s) 381, 738, 1113, 2115, 3017, 3395, 3506, 3946
BcuI ACTAGT 1 cut(s) 2915
BfmI CTRYAG 9 cut(s) 1005, 1164, 2199, 2226, 3396, 3588, 3930, 4013, 4689
BfuAI ACCTGC 2 cut(s) 2206, 2858
BglII AGATCT 1 cut(s) 2720
Bme18I GGWCC 6 cut(s) 859, 919, 2218, 3156, 3422, 5027
BmeT110I CYCGRG 2 cut(s) 627, 3842
BmgBI CACGTC 3 cut(s) 406, 1376, 4500
BmgT120I GGNCC 9 cut(s) 672, 859, 919, 1362, 2218, 3156, 3422, 4328, 5027
BmtI GCTAGC 1 cut(s) 2978
BpiI GAAGAC 4 cut(s) 615, 2076, 2592, 4067
BplI GAGNNNNNCTC 2 cut(s) 3014, 3046
BpmI CTGGAG 3 cut(s) 1008, 1956, 5155
Bpu14I TTCGAA 2 cut(s) 1286, 3148
BpuEI CTTGAG 1 cut(s) 4097
BpuMI CCSGG 6 cut(s) 390, 1957, 4071, 4522, 4838, 5106
BsaBI GATNNNNATC 1 cut(s) 1668
BsaHI GRCGYC 4 cut(s) 1589, 2417, 2993, 3497
BsaI GGTCTC 2 cut(s) 381, 3395
BsaWI WCCGGW 1 cut(s) 724
BsaXI ACNNNNNCTCC 6 cut(s) 1496, 1526, 5114, 5128, 5144, 5158
Bse118I RCCGGY 1 cut(s) 916
Bse1I ACTGG 6 cut(s) 535, 3071, 3310, 3321, 4322, 5041
Bse3DI GCAATG 7 cut(s) 14, 1257, 3796, 4124, 4280, 4739, 4825
Bse8I GATNNNNATC 1 cut(s) 1668
BseJI GATNNNNATC 1 cut(s) 1668
BseMI GCAATG 7 cut(s) 14, 1257, 3796, 4124, 4280, 4739, 4825
BseMII CTCAG 7 cut(s) 920, 987, 1124, 2201, 2883, 3045, 4426
BseNI ACTGG 6 cut(s) 535, 3071, 3310, 3321, 4322, 5041
BseRI GAGGAG 3 cut(s) 1049, 4618, 5154
BseSI GKGCMC 1 cut(s) 4875
BsgI GTGCAG 1 cut(s) 749
Bsh1236I CGCG 4 cut(s) 120, 280, 607, 808
Bsh1285I CGRYCG 1 cut(s) 4768
BshNI GGYRCC 1 cut(s) 186
BsiEI CGRYCG 1 cut(s) 4768
BsiHKAI GWGCWC 2 cut(s) 1917, 4477
BsiHKCI CYCGRG 2 cut(s) 627, 3842
BsiSI CCGG 9 cut(s) 389, 725, 917, 1956, 4071, 4378, 4521, 4838, 5105
BslFI GGGAC 7 cut(s) 55, 110, 845, 1505, 2204, 3142, 3468
BsmAI GTCTC 8 cut(s) 381, 738, 1113, 2115, 3017, 3395, 3506, 3946
BsmBI CGTCTC 1 cut(s) 3506
BsmFI GGGAC 7 cut(s) 55, 110, 845, 1505, 2204, 3142, 3468
BsmI GAATGC 4 cut(s) 460, 2659, 3971, 5073
Bso31I GGTCTC 2 cut(s) 381, 3395
BsoBI CYCGRG 2 cut(s) 627, 3842
Bsp119I TTCGAA 2 cut(s) 1286, 3148
Bsp1286I GDGCHC 4 cut(s) 1181, 1917, 4477, 4875
Bsp19I CCATGG 1 cut(s) 2411
Bsp68I TCGCGA 1 cut(s) 120
BspCNI CTCAG 7 cut(s) 921, 986, 1123, 2202, 2884, 3044, 4425
BspFNI CGCG 4 cut(s) 120, 280, 607, 808
BspHI TCATGA 2 cut(s) 1120, 3466
BspMAI CTGCAG 5 cut(s) 2203, 3400, 3592, 3934, 4693
BspMI ACCTGC 2 cut(s) 2206, 2858
BspOI GCTAGC 1 cut(s) 2978
BspQI GCTCTTC 1 cut(s) 2176
BspT104I TTCGAA 2 cut(s) 1286, 3148
BspT107I GGYRCC 1 cut(s) 186
BspTNI GGTCTC 2 cut(s) 381, 3395
BsrDI GCAATG 7 cut(s) 14, 1257, 3796, 4124, 4280, 4739, 4825
BsrFI RCCGGY 1 cut(s) 916
BsrI ACTGG 6 cut(s) 535, 3071, 3310, 3321, 4322, 5041
BssAI RCCGGY 1 cut(s) 916
BssNI GRCGYC 4 cut(s) 1589, 2417, 2993, 3497
BssSI CACGAG 2 cut(s) 56, 2781
BssT1I CCWWGG 5 cut(s) 20, 73, 811, 2411, 3202
Bst2BI CACGAG 2 cut(s) 56, 2781
Bst4CI ACNGT 9 cut(s) 967, 1441, 2516, 2800, 2848, 4265, 4398, 4885, 5091
Bst6I CTCTTC 5 cut(s) 2176, 2418, 3612, 4723, 5121
BstACI GRCGYC 4 cut(s) 1589, 2417, 2993, 3497
BstAPI GCANNNNNTGC 3 cut(s) 989, 2702, 4741
BstBI TTCGAA 2 cut(s) 1286, 3148
BstDSI CCRYGG 1 cut(s) 2411
BstEII GGTNACC 2 cut(s) 1526, 2939
BstENI CCTNNNNNAGG 1 cut(s) 2063
BstFNI CGCG 4 cut(s) 120, 280, 607, 808
BstHHI GCGC 1 cut(s) 810
BstMAI GTCTC 8 cut(s) 381, 738, 1113, 2115, 3017, 3395, 3506, 3946
BstMCI CGRYCG 1 cut(s) 4768
BstNSI RCATGY 5 cut(s) 622, 1765, 2460, 3358, 4640
BstPI GGTNACC 2 cut(s) 1526, 2939
BstSFI CTRYAG 9 cut(s) 1005, 1164, 2199, 2226, 3396, 3588, 3930, 4013, 4689
BstSLI GKGCMC 1 cut(s) 4875
BstUI CGCG 4 cut(s) 120, 280, 607, 808
BstV2I GAAGAC 4 cut(s) 615, 2076, 2592, 4067
BstX2I RGATCY 7 cut(s) 1669, 2371, 2720, 3055, 4009, 5013, 5047
BstXI CCANNNNNNTGG 1 cut(s) 21
BstYI RGATCY 7 cut(s) 1669, 2371, 2720, 3055, 4009, 5013, 5047
BtgI CCRYGG 1 cut(s) 2411
BtgZI GCGATG 1 cut(s) 2150
BtrI CACGTC 3 cut(s) 406, 1376, 4500
BtsI GCAGTG 2 cut(s) 376, 3108
BtsIMutI CAGTG 5 cut(s) 376, 1227, 2796, 3108, 3328
BtuMI TCGCGA 1 cut(s) 120
BveI ACCTGC 2 cut(s) 2206, 2858
CaiI CAGNNNCTG 5 cut(s) 2852, 3647, 3938, 3953, 5051
CciI TCATGA 2 cut(s) 1120, 3466
CfoI GCGC 1 cut(s) 810
Cfr10I RCCGGY 1 cut(s) 916
Cfr13I GGNCC 9 cut(s) 672, 859, 919, 1362, 2218, 3156, 3422, 4328, 5027
CseI GACGC 6 cut(s) 433, 613, 1502, 2425, 3001, 3486
CsiI ACCWGGT 3 cut(s) 160, 1530, 3757
Csp6I GTAC 5 cut(s) 2761, 3218, 3767, 4684, 5034
CspCI CAANNNNNGTGG 4 cut(s) 1203, 1238, 2042, 2077
CviQI GTAC 5 cut(s) 2761, 3218, 3767, 4684, 5034
DraIII CACNNNGTG 2 cut(s) 2786, 3143
DrdI GACNNNNNNGTC 3 cut(s) 162, 1738, 2798
DseDI GACNNNNNNGTC 3 cut(s) 162, 1738, 2798
EaeI YGGCCR 2 cut(s) 544, 4677
Eam1104I CTCTTC 5 cut(s) 2176, 2418, 3612, 4723, 5121
EarI CTCTTC 5 cut(s) 2176, 2418, 3612, 4723, 5121
Ecl136II GAGCTC 1 cut(s) 4475
Eco130I CCWWGG 5 cut(s) 20, 73, 811, 2411, 3202
Eco147I AGGCCT 2 cut(s) 1243, 3526
Eco24I GRGCYC 2 cut(s) 1181, 4477
Eco31I GGTCTC 2 cut(s) 381, 3395
Eco47I GGWCC 6 cut(s) 859, 919, 2218, 3156, 3422, 5027
Eco53kI GAGCTC 1 cut(s) 4475
Eco57I CTGAAG 7 cut(s) 123, 723, 2586, 3303, 3636, 4203, 4577
Eco88I CYCGRG 2 cut(s) 627, 3842
Eco91I GGTNACC 2 cut(s) 1526, 2939
EcoICRI GAGCTC 1 cut(s) 4475
EcoNI CCTNNNNNAGG 1 cut(s) 2063
EcoO109I RGGNCCY 2 cut(s) 859, 3156
EcoO65I GGTNACC 2 cut(s) 1526, 2939
EcoRI GAATTC 1 cut(s) 3874
EcoT14I CCWWGG 5 cut(s) 20, 73, 811, 2411, 3202
EcoT22I ATGCAT 2 cut(s) 223, 5073
EcoT38I GRGCYC 2 cut(s) 1181, 4477
ErhI CCWWGG 5 cut(s) 20, 73, 811, 2411, 3202
Esp3I CGTCTC 1 cut(s) 3506
FaqI GGGAC 7 cut(s) 55, 110, 845, 1505, 2204, 3142, 3468
FauI CCCGC 1 cut(s) 2453
FbaI TGATCA 3 cut(s) 1452, 1974, 2494
FriOI GRGCYC 2 cut(s) 1181, 4477
GlaI GCGC 1 cut(s) 809
GsuI CTGGAG 3 cut(s) 1008, 1956, 5155
HapII CCGG 9 cut(s) 389, 725, 917, 1956, 4071, 4378, 4521, 4838, 5105
HgaI GACGC 6 cut(s) 433, 613, 1502, 2425, 3001, 3486
HhaI GCGC 1 cut(s) 810
Hin1I GRCGYC 4 cut(s) 1589, 2417, 2993, 3497
Hin6I GCGC 1 cut(s) 808
HinP1I GCGC 1 cut(s) 808
HincII GTYRAC 2 cut(s) 1066, 4002
HindII GTYRAC 2 cut(s) 1066, 4002
HindIII AAGCTT 2 cut(s) 2131, 2447
HpaII CCGG 9 cut(s) 389, 725, 917, 1956, 4071, 4378, 4521, 4838, 5105
Hpy166II GTNNAC 7 cut(s) 1066, 1373, 3425, 3713, 3769, 4002, 4961
Hpy8I GTNNAC 7 cut(s) 1066, 1373, 3425, 3713, 3769, 4002, 4961
Hpy99I CGWCG 2 cut(s) 1591, 1594
HpyCH4III ACNGT 9 cut(s) 967, 1441, 2516, 2800, 2848, 4265, 4398, 4885, 5091
HpyCH4IV ACGT 7 cut(s) 405, 1375, 1589, 4166, 4499, 4914, 4995
HpySE526I ACGT 7 cut(s) 405, 1375, 1589, 4166, 4499, 4914, 4995
Hsp92I GRCGYC 4 cut(s) 1589, 2417, 2993, 3497
HspAI GCGC 1 cut(s) 808
Ksp22I TGATCA 3 cut(s) 1452, 1974, 2494
LguI GCTCTTC 1 cut(s) 2176
LmnI GCTCC 6 cut(s) 913, 1471, 3931, 4306, 4472, 5109
MabI ACCWGGT 3 cut(s) 160, 1530, 3757
MaeII ACGT 7 cut(s) 405, 1375, 1589, 4166, 4499, 4914, 4995
MfeI CAATTG 4 cut(s) 494, 579, 1674, 2691
MflI RGATCY 7 cut(s) 1669, 2371, 2720, 3055, 4009, 5013, 5047
MhlI GDGCHC 4 cut(s) 1181, 1917, 4477, 4875
MlsI TGGCCA 2 cut(s) 546, 4679
MluNI TGGCCA 2 cut(s) 546, 4679
MlyI GAGTC 9 cut(s) 77, 92, 710, 1123, 1316, 1651, 2034, 4861, 5138
MmeI TCCRAC 4 cut(s) 45, 1131, 1275, 4470
Mox20I TGGCCA 2 cut(s) 546, 4679
Mph1103I ATGCAT 2 cut(s) 223, 5073
MroXI GAANNNNTTC 5 cut(s) 35, 1197, 2468, 2599, 4546
MscI TGGCCA 2 cut(s) 546, 4679
MslI CAYNNNNRTG 9 cut(s) 216, 725, 2706, 3374, 3471, 3902, 4458, 4530, 5066
Msp20I TGGCCA 2 cut(s) 546, 4679
MspA1I CMGCKG 2 cut(s) 1368, 4906
MspI CCGG 9 cut(s) 389, 725, 917, 1956, 4071, 4378, 4521, 4838, 5105
MunI CAATTG 4 cut(s) 494, 579, 1674, 2691
Mva1269I GAATGC 4 cut(s) 460, 2659, 3971, 5073
MvnI CGCG 4 cut(s) 120, 280, 607, 808
NciI CCSGG 6 cut(s) 390, 1957, 4071, 4522, 4838, 5106
NcoI CCATGG 1 cut(s) 2411
NheI GCTAGC 1 cut(s) 2974
NmeAIII GCCGAG 1 cut(s) 1438
NmuCI GTSAC 8 cut(s) 702, 760, 1300, 1441, 1526, 1643, 2335, 3251
NruI TCGCGA 1 cut(s) 120
NsiI ATGCAT 2 cut(s) 223, 5073
NspI RCATGY 5 cut(s) 622, 1765, 2460, 3358, 4640
NspV TTCGAA 2 cut(s) 1286, 3148
OliI CACNNNNGTG 1 cut(s) 725
PaeI GCATGC 2 cut(s) 1765, 4640
PagI TCATGA 2 cut(s) 1120, 3466
PaqCI CACCTGC 1 cut(s) 2206
PceI AGGCCT 2 cut(s) 1243, 3526
PciSI GCTCTTC 1 cut(s) 2176
PcsI WCGNNNNNNNCGW 2 cut(s) 2098, 3145
PctI GAATGC 4 cut(s) 460, 2659, 3971, 5073
PdmI GAANNNNTTC 5 cut(s) 35, 1197, 2468, 2599, 4546
PflFI GACNNNGTC 2 cut(s) 607, 1306
PflMI CCANNNNNTGG 3 cut(s) 167, 2965, 5036
PfoI TCCNGGA 3 cut(s) 1576, 1955, 5132
Ple19I CGATCG 1 cut(s) 4768
PleI GAGTC 9 cut(s) 76, 92, 709, 1122, 1315, 1650, 2033, 4860, 5137
PpsI GAGTC 9 cut(s) 76, 92, 709, 1122, 1315, 1650, 2033, 4860, 5137
PpuMI RGGWCCY 2 cut(s) 859, 3156
PshBI ATTAAT 4 cut(s) 411, 2238, 3629, 4776
Psp124BI GAGCTC 1 cut(s) 4477
Psp5II RGGWCCY 2 cut(s) 859, 3156
PspEI GGTNACC 2 cut(s) 1526, 2939
PspPI GGNCC 9 cut(s) 672, 859, 919, 1362, 2218, 3156, 3422, 4328, 5027
PspPPI RGGWCCY 2 cut(s) 859, 3156
PstI CTGCAG 5 cut(s) 2203, 3400, 3592, 3934, 4693
PstNI CAGNNNCTG 5 cut(s) 2852, 3647, 3938, 3953, 5051
PsuI RGATCY 7 cut(s) 1669, 2371, 2720, 3055, 4009, 5013, 5047
PsyI GACNNNGTC 2 cut(s) 607, 1306
PvuI CGATCG 1 cut(s) 4768
PvuII CAGCTG 1 cut(s) 1368
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 5 cut(s) 2762, 3219, 3768, 4685, 5035
RsaNI GTAC 5 cut(s) 2761, 3218, 3767, 4684, 5034
RseI CAYNNNNRTG 9 cut(s) 216, 725, 2706, 3374, 3471, 3902, 4458, 4530, 5066
SacI GAGCTC 1 cut(s) 4477
SapI GCTCTTC 1 cut(s) 2176
Sau96I GGNCC 9 cut(s) 672, 859, 919, 1362, 2218, 3156, 3422, 4328, 5027
SbfI CCTGCAGG 1 cut(s) 2203
SchI GAGTC 9 cut(s) 77, 92, 710, 1123, 1316, 1651, 2034, 4861, 5138
SdaI CCTGCAGG 1 cut(s) 2203
SduI GDGCHC 4 cut(s) 1181, 1917, 4477, 4875
SexAI ACCWGGT 3 cut(s) 160, 1530, 3757
SfcI CTRYAG 9 cut(s) 1005, 1164, 2199, 2226, 3396, 3588, 3930, 4013, 4689
SfuI TTCGAA 2 cut(s) 1286, 3148
SinI GGWCC 6 cut(s) 859, 919, 2218, 3156, 3422, 5027
SmiMI CAYNNNNRTG 9 cut(s) 216, 725, 2706, 3374, 3471, 3902, 4458, 4530, 5066
SmlI CTYRAG 1 cut(s) 4112
SmoI CTYRAG 1 cut(s) 4112
SpeI ACTAGT 1 cut(s) 2915
SphI GCATGC 2 cut(s) 1765, 4640
Sse8387I CCTGCAGG 1 cut(s) 2203
SseBI AGGCCT 2 cut(s) 1243, 3526
SspI AATATT 2 cut(s) 3627, 4774
SstI GAGCTC 1 cut(s) 4477
StuI AGGCCT 2 cut(s) 1243, 3526
StyI CCWWGG 5 cut(s) 20, 73, 811, 2411, 3202
TaaI ACNGT 9 cut(s) 967, 1441, 2516, 2800, 2848, 4265, 4398, 4885, 5091
TaiI ACGT 7 cut(s) 408, 1378, 1592, 4169, 4502, 4917, 4998
TaqII GACCGA 1 cut(s) 219
TatI WGTACW 2 cut(s) 3766, 5033
TauI GCSGC 6 cut(s) 7, 808, 2005, 3614, 4273, 4909
TscAI CASTG 5 cut(s) 376, 1227, 2803, 3108, 3328
TseFI GTSAC 8 cut(s) 702, 760, 1300, 1441, 1526, 1643, 2335, 3251
Tsp45I GTSAC 8 cut(s) 702, 760, 1300, 1441, 1526, 1643, 2335, 3251
TspGWI ACGGA 1 cut(s) 3530
TspRI CASTG 5 cut(s) 376, 1227, 2803, 3108, 3328
Tth111I GACNNNGTC 2 cut(s) 607, 1306
Van91I CCANNNNNTGG 3 cut(s) 167, 2965, 5036
VpaK11BI GGWCC 6 cut(s) 859, 919, 2218, 3156, 3422, 5027
VspI ATTAAT 4 cut(s) 411, 2238, 3629, 4776
XagI CCTNNNNNAGG 1 cut(s) 2063
XceI RCATGY 5 cut(s) 622, 1765, 2460, 3358, 4640
XmnI GAANNNNTTC 5 cut(s) 35, 1197, 2468, 2599, 4546
ZraI GACGTC 1 cut(s) 1590
Zsp2I ATGCAT 2 cut(s) 223, 5073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.