Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0002096

Physical Location & Seq

Genomic Coordinates Forward (+)

33632783 .. 33636284

Gene Structure 3502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1268800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGGAGTCGCAACACGTCGGGACGCCCCCAGGCGAAGAGGAGGAGAAGTCGGTTTTCCAGAAGGTAAGGGACAAGGCGAAGAAGATGAAGAACAAGTTCACAAAGCATGGTCAAGGCCATGAACTCGATCATCACGATCCCGACGAGGAAGATGGTGAAGAAGAAGAAGACCTTGAAGTGCATGATGCAACAACAACTGGAAGCCGTGCTACGGGGCAAGGAGACATTCCGAAGGTACCAATGGCAGAATTTGGAGGCACGAAAGGAACAGCGAGGTACGATCACGACCCCAAAGTGCCGCATTTGGAGAAGACTGATCCGAAGAAGGATGGCGTACCCGCTGCAAGTCAACGCACTACGCAAATTCATTCCGTTCAGCCAGCAGTGACACCCATGCACGACGAGGTTCTCGAGCCTAGGCCAAATTACCATGCCTCAACGACGGAGTCTCTCGTTGGGCATGATCAAATTCCAACCCAACAGCCCAAAGTCGATTTCGGGAAAACATCTGTAATGGGGAAAGCACCTAATGCCCCACAGAACACTCCTCTGCCTTCTTTGGGAGAGTACAAGTCCAAGGGTGCTGACCAAAGTCAAACTTTCGTTTCTGGGAAAGAAGGGCATTTAGGTCAATCTAGGGAGCACATCCCTGTTTCTTCCCTTGGAGGAGATTACCAGAAAACCAATGTCGCTGACCCAAGGCAGACTTCTGTTACTGGGAAAGAAGGGCATCCAGGTCAAACCAGGGTCCCTTTGCACCACCGGGGATCGGACGATCGCACCCCTATTTCCAGTCGTGGAGACAACCAGAAGACCAATGTCACAGACCCAAGTCATACTTCTGTTACCGGAAACGAAGGGCATTTCGGGCAGTCCAAGGTAAACTTGGACCGACCAAGAGGATTGGAGGAGGATCCAAATGCTCATATGGCCGACCCTCTAGCGTTTACTCCTTCAAATGATCAGACTAAAGTTACTGGTCCTACTAATGCTGGTGGGGATGAAATTGGAATTACACCGATTCTCCGCTCGTTTGATAAGATGAGCATGCATGCTGGAGATACCAAGCCATCGAACCAGGGCAGTAGTTACACCGAGAAAGCTTCATCTGCCGCATCCGCTATTGCTGACAAGGCGACATCTGCAAAAAACGCTGTGGCATCCACGTTAGGATATGGCGGAGGGAACAATGATCAACGTGAAGATGTTAATCCTTATACTTCTTCTCCAGAAAATGATTCAACTAAATCAGGATTACACCATGATGTTGGAACAAATCAAAACCTGGGCACTGGAAGCCATGATCAATTTTGTTCTACTCACCCACCGAACCAGGGCGGTAGTTACACAGAAAAAGTTTCATCCGCCACGTCCGCCGTTGCCGACAAGTCAATATCTGCAGAAAAGGCCGTCGCTTCCAAGCTTGGATATGGAGGCGGGAACAAGGATCAGCACGAATTTGTTAAGCCTCAGGCTTCCAGTTATCAAACTACAGGAACAGGACAAAATCTAAGCACTCCTGAGAATCCATCAAACCAGGGGAGCTATACTGGGAAAATATCATCAGCCACTAATGCTATTTCCGGTACAGCAGTTTCTGCGAAAAACGTCGTCGCTTCCAAGCTAGGATATGGCGGCGCGACTGACCAACAGCAACCTGGAGATCACGCAGCCGTCAGGTCCGGATCAGCTGCACCTGAGCAACAGGGTAAGGGCATTACAGCCCCAGTTACTGAGAAGCCGACAACTGTCTATGAGAAGGTTGCCGGGGCAGGGAGCACCCTGATGTCGATGCTCCCTGGCAGTACAGGGACAGCTGGCAAAGAAGAAATCCACCAGGGTACTGCTACTACCCGGGGCGAGTATGACAAAGCCGGGAAGGACTATTTGTCTGAGAAGTTGAAGCCCGGTGAGGAGGACAGGGCGCTTTCTGAGGTCATATCGGAAAACTCGCATGAGGGTAAGGCCGAGCAGCCTCGGAGTGGTGCTAGGCCTGTCGGGAAAGTGACTGAGTCCGAGGAGGTGAGTAGGCGGTTGGGGCCGGATTATGGGGCTGAGGAGGTCCAGCAGTCTGGCTATGGGAAGGTTATGGCGGATACGCTTAGAGGGGCTGTTGGTTCGTTGTTTGGGAAAGCTGATCAAACCACTGCTTCTCCAGAGTCCCTTGGTTCTTCAACTGGTACAGAGGGTTTCTCTAGTTCTGGCGGTGGAGTGGCGGAGCGCGGAGGTCGCGGCGGTGTGGAGAAGCAGAGACTTGAAGAGTCCGGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008150 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009611 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009743 GO:0009755 GO:0009987 GO:0010033 GO:0010035 GO:0010150 GO:0010555 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042538 GO:0043207 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048511 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:1901700 GO:1901701 GO:1902074 GO:2000026 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAP160

Protein Analysis

758

Amino Acids

79.43

Weight (kDa)

5.74

Isoelectric Point (pI)

35.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LTI65_LTI78_N	PF23403	13 - 67	1.1e-11	LTI65/LTI78 CAP160 N-terminal
LTI65_LTI78_NYQTKV	PF23402	293 - 351	1.2e-23	LTI65/LTI78 NYQTKV repeat
CAP160	PF07918	369 - 394	1.5e-10	CAP160 repeat
CAP160	PF07918	453 - 479	8.8e-10	CAP160 repeat
CAP160	PF07918	520 - 546	9.5e-10	CAP160 repeat
LTI65_PGEED	PF23399	627 - 649	2.8e-12	LTI65/LTI78 PGEED repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25580 AT4G25580 AT5G52300 AT5G52300 AT5G52310
fragaria_vesca	FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29491
malus_domestica	MD01G1201000.v1.1 MD07G1268800.v1.1
prunus_persica	Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1
pyrus_communis	pycom07g24640
rosa_chinensis	RchiOBHm_Chr1g0377291 RchiOBHm_Chr1g0377331
rosa_laevigata	RLG00000026530
rosa_multiflora	Rmu_co8507117.1_g000001 Rmu_sc0001944.1_g000005 Rmu_sc0017163.1_g000001 Rmu_sc0022060.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281320 Rroxscaffold_4G00281330
rosa_rugosa	Rorug01G0402700
rosa_samantha	Rh1AG420000 Rh1AG420500 Rh1BG379000 Rh1BG379100 Rh1BG379200 Rh1BG379300 Rh1CG393000 Rh1CG393100 Rh1CG393200 Rh1CG393300 Rh1DG409600 Rh1DG409700 Rh1DG409800 Rh1DG410300
rosa_wichuraiana	Rw1G036860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	235
AccB1I	GGYRCC	1 cut(s)	235
AccBSI	CCGCTC	1 cut(s)	1029
AccII	CGCG	3 cut(s)	1640, 2223, 2232
AccIII	TCCGGA	1 cut(s)	1682
AclWI	GGATC	7 cut(s)	131, 311, 775, 908, 921, 1455, 1693
AcoI	YGGCCR	1 cut(s)	930
AcsI	RAATTY	4 cut(s)	248, 363, 468, 1457
AcyI	GRCGYC	1 cut(s)	23
AfaI	GTAC	8 cut(s)	237, 278, 336, 569, 1588, 1807, 1843, 2182
AfiI	CCNNNNNNNGG	7 cut(s)	211, 560, 769, 1334, 1773, 1982, 2048
AflIII	ACRYGT	1 cut(s)	13
AgsI	TTSAA	6 cut(s)	176, 957, 1242, 1903, 2175, 2258
AhdI	GACNNNNNGTC	1 cut(s)	1888
AjiI	CACGTC	2 cut(s)	16, 1371
AjuI	GAANNNNNNNTTGG	6 cut(s)	479, 511, 691, 723, 823, 855
AluBI	AGCT	7 cut(s)	1103, 1423, 1545, 1624, 1691, 1817, 2135
AluI	AGCT	7 cut(s)	1103, 1423, 1545, 1624, 1691, 1817, 2135
Alw21I	GWGCWC	2 cut(s)	645, 1781
Alw26I	GTCTC	4 cut(s)	216, 453, 795, 2245
AlwI	GGATC	7 cut(s)	131, 311, 775, 908, 921, 1455, 1693
AlwNI	CAGNNNCTG	2 cut(s)	1598, 1733
Ama87I	CYCGRG	2 cut(s)	410, 1854
Aor13HI	TCCGGA	1 cut(s)	1682
AoxI	GGCC	7 cut(s)	115, 419, 930, 1407, 1965, 1991, 2039
ApeKI	GCWGC	4 cut(s)	341, 1670, 1691, 1972
ApoI	RAATTY	4 cut(s)	248, 363, 468, 1457
Asp700I	GAANNNNTTC	1 cut(s)	95
Asp718I	GGTACC	1 cut(s)	235
AspA2I	CCTAGG	1 cut(s)	416
AspLEI	GCGC	3 cut(s)	1640, 1927, 2223
AspS9I	GGNCC	6 cut(s)	748, 889, 980, 1680, 2039, 2062
AsuC2I	CCSGG	7 cut(s)	764, 1768, 1855, 1856, 1876, 1908, 2266
AsuHPI	GGTGA	4 cut(s)	167, 1313, 1922, 2035
AvaI	CYCGRG	2 cut(s)	410, 1854
AvaII	GGWCC	5 cut(s)	748, 889, 980, 1680, 2062
AvrII	CCTAGG	1 cut(s)	416
AxyI	CCTNAGG	1 cut(s)	1470
BaeGI	GKGCMC	1 cut(s)	1292
BaeI	ACNNNNGTAYC	2 cut(s)	1578, 1611
BamHI	GGATCC	1 cut(s)	913
BanI	GGYRCC	1 cut(s)	235
BarI	GAAGNNNNNNTAC	2 cut(s)	193, 225
BbsI	GAAGAC	3 cut(s)	174, 317, 818
Bbv12I	GWGCWC	2 cut(s)	645, 1781
BbvCI	CCTCAGC	1 cut(s)	2055
BbvI	GCAGC	4 cut(s)	328, 1678, 1682, 1984
BccI	CCATC	4 cut(s)	146, 323, 1078, 1537
BceAI	ACGGC	4 cut(s)	189, 1361, 1394, 1658
BciVI	GTATCC	1 cut(s)	2089
BclI	TGATCA	5 cut(s)	463, 961, 1192, 1303, 2137
BcnI	CCSGG	7 cut(s)	764, 1768, 1855, 1856, 1876, 1908, 2266
BcoDI	GTCTC	4 cut(s)	216, 453, 795, 2245
BfaI	CTAG	6 cut(s)	417, 636, 941, 1625, 1989, 2196
BfmI	CTRYAG	2 cut(s)	1398, 1491
BfoI	RGCGCY	1 cut(s)	1928
BfuI	GTATCC	1 cut(s)	2089
BisI	GCNGC	8 cut(s)	299, 342, 1113, 1636, 1671, 1692, 1973, 2233
BlnI	CCTAGG	1 cut(s)	416
BlsI	GCNGC	8 cut(s)	300, 343, 1114, 1637, 1672, 1693, 1974, 2234
Bme18I	GGWCC	5 cut(s)	748, 889, 980, 1680, 2062
BmeRI	GACNNNNNGTC	1 cut(s)	1888
BmeT110I	CYCGRG	2 cut(s)	410, 1854
BmgBI	CACGTC	2 cut(s)	16, 1371
BmgT120I	GGNCC	6 cut(s)	748, 889, 980, 1680, 2039, 2062
BmiI	GGNNCC	5 cut(s)	237, 749, 750, 915, 2040
BmrI	ACTGGG	3 cut(s)	726, 1560, 1721
BmsI	GCATC	5 cut(s)	175, 739, 1124, 1169, 1782
BmuI	ACTGGG	3 cut(s)	726, 1560, 1721
BoxI	GACNNNNGTC	4 cut(s)	591, 818, 831, 1748
BpiI	GAAGAC	3 cut(s)	174, 317, 818
BplI	GAGNNNNNCTC	2 cut(s)	2177, 2209
BpmI	CTGGAG	4 cut(s)	1077, 1212, 1680, 2139
Bpu10I	CCTNAGC	2 cut(s)	1698, 2055
BpuMI	CCSGG	7 cut(s)	764, 1768, 1855, 1856, 1876, 1908, 2266
BsaBI	GATNNNNATC	1 cut(s)	1209
BsaHI	GRCGYC	1 cut(s)	23
BsaWI	WCCGGW	3 cut(s)	848, 1583, 1682
BsaXI	ACNNNNNCTCC	8 cut(s)	32, 62, 1008, 1038, 1210, 1240, 2137, 2167
Bsc4I	CCNNNNNNNGG	7 cut(s)	211, 560, 769, 1334, 1773, 1982, 2048
Bse1I	ACTGG	9 cut(s)	202, 721, 792, 982, 1297, 1479, 1555, 1727, 2182
Bse21I	CCTNAGG	1 cut(s)	1470
Bse8I	GATNNNNATC	1 cut(s)	1209
BseAI	TCCGGA	1 cut(s)	1682
BseGI	GGATG	7 cut(s)	334, 645, 730, 1006, 1115, 1160, 1361
BseJI	GATNNNNATC	1 cut(s)	1209
BseLI	CCNNNNNNNGG	7 cut(s)	211, 560, 769, 1334, 1773, 1982, 2048
BseMII	CTCAG	8 cut(s)	1484, 1512, 1689, 1725, 1884, 1923, 2001, 2046
BseNI	ACTGG	9 cut(s)	202, 721, 792, 982, 1297, 1479, 1555, 1727, 2182
BseRI	GAGGAG	8 cut(s)	53, 56, 537, 681, 923, 1928, 2033, 2072
BseSI	GKGCMC	1 cut(s)	1292
BseXI	GCAGC	4 cut(s)	328, 1678, 1682, 1984
BsgI	GTGCAG	1 cut(s)	1677
Bsh1236I	CGCG	3 cut(s)	1640, 2223, 2232
Bsh1285I	CGRYCG	1 cut(s)	778
BshFI	GGCC	7 cut(s)	117, 421, 932, 1409, 1967, 1993, 2041
BshNI	GGYRCC	1 cut(s)	235
BsiEI	CGRYCG	1 cut(s)	778
BsiHKAI	GWGCWC	2 cut(s)	645, 1781
BsiHKCI	CYCGRG	2 cut(s)	410, 1854
BslFI	GGGAC	5 cut(s)	34, 83, 734, 1825, 2146
BslI	CCNNNNNNNGG	7 cut(s)	211, 560, 769, 1334, 1773, 1982, 2048
BsmAI	GTCTC	4 cut(s)	216, 453, 795, 2245
BsmFI	GGGAC	5 cut(s)	34, 83, 734, 1825, 2146
BsnI	GGCC	7 cut(s)	117, 421, 932, 1409, 1967, 1993, 2041
BsoBI	CYCGRG	2 cut(s)	410, 1854
Bsp1286I	GDGCHC	3 cut(s)	645, 1292, 1781
Bsp13I	TCCGGA	1 cut(s)	1682
BspANI	GGCC	7 cut(s)	117, 421, 932, 1409, 1967, 1993, 2041
BspCNI	CTCAG	8 cut(s)	1483, 1513, 1690, 1726, 1885, 1924, 2002, 2047
BspEI	TCCGGA	1 cut(s)	1682
BspFNI	CGCG	3 cut(s)	1640, 2223, 2232
BspLI	GGNNCC	5 cut(s)	237, 749, 750, 915, 2040
BspMAI	CTGCAG	1 cut(s)	1402
BspPI	GGATC	7 cut(s)	131, 311, 775, 908, 921, 1455, 1693
BspT107I	GGYRCC	1 cut(s)	235
BsrBI	CCGCTC	1 cut(s)	1029
BsrI	ACTGG	9 cut(s)	202, 721, 792, 982, 1297, 1479, 1555, 1727, 2182
BssNI	GRCGYC	1 cut(s)	23
BssT1I	CCWWGG	6 cut(s)	416, 576, 661, 698, 876, 2164
Bst4CI	ACNGT	1 cut(s)	1750
Bst6I	CTCTTC	2 cut(s)	30, 2253
BstACI	GRCGYC	1 cut(s)	23
BstAPI	GCANNNNNTGC	2 cut(s)	530, 1598
BstC8I	GCNNGC	4 cut(s)	381, 1049, 1053, 1819
BstF5I	GGATG	7 cut(s)	334, 645, 730, 1006, 1115, 1160, 1361
BstFNI	CGCG	3 cut(s)	1640, 2223, 2232
BstH2I	RGCGCY	1 cut(s)	1928
BstHHI	GCGC	3 cut(s)	1640, 1927, 2223
BstMAI	GTCTC	4 cut(s)	216, 453, 795, 2245
BstMCI	CGRYCG	1 cut(s)	778
BstNSI	RCATGY	2 cut(s)	1051, 1055
BstPAI	GACNNNNGTC	4 cut(s)	591, 818, 831, 1748
BstSFI	CTRYAG	2 cut(s)	1398, 1491
BstSLI	GKGCMC	1 cut(s)	1292
BstUI	CGCG	3 cut(s)	1640, 2223, 2232
BstV1I	GCAGC	4 cut(s)	328, 1678, 1682, 1984
BstV2I	GAAGAC	3 cut(s)	174, 317, 818
BstX2I	RGATCY	1 cut(s)	913
BstXI	CCANNNNNNTGG	2 cut(s)	1268, 2072
BstYI	RGATCY	1 cut(s)	913
Bsu36I	CCTNAGG	1 cut(s)	1470
BsuI	GTATCC	1 cut(s)	2089
BsuRI	GGCC	7 cut(s)	117, 421, 932, 1409, 1967, 1993, 2041
BtrI	CACGTC	2 cut(s)	16, 1371
BtsCI	GGATG	7 cut(s)	334, 645, 730, 1006, 1115, 1160, 1361
BtsI	GCAGTG	2 cut(s)	390, 2145
BtsIMutI	CAGTG	3 cut(s)	390, 1290, 2145
Cac8I	GCNNGC	4 cut(s)	381, 1049, 1053, 1819
CaiI	CAGNNNCTG	2 cut(s)	1598, 1733
CfoI	GCGC	3 cut(s)	1640, 1927, 2223
Cfr13I	GGNCC	6 cut(s)	748, 889, 980, 1680, 2039, 2062
Cfr9I	CCCGGG	1 cut(s)	1854
CseI	GACGC	1 cut(s)	31
Csp6I	GTAC	8 cut(s)	236, 277, 335, 568, 1587, 1806, 1842, 2181
CviQI	GTAC	8 cut(s)	236, 277, 335, 568, 1587, 1806, 1842, 2181
DriI	GACNNNNNGTC	1 cut(s)	1888
EaeI	YGGCCR	1 cut(s)	930
Eam1104I	CTCTTC	2 cut(s)	30, 2253
Eam1105I	GACNNNNNGTC	1 cut(s)	1888
EarI	CTCTTC	2 cut(s)	30, 2253
EciI	GGCGGA	5 cut(s)	1194, 1354, 1363, 2108, 2231
Eco130I	CCWWGG	6 cut(s)	416, 576, 661, 698, 876, 2164
Eco147I	AGGCCT	1 cut(s)	1993
Eco47I	GGWCC	5 cut(s)	748, 889, 980, 1680, 2062
Eco81I	CCTNAGG	1 cut(s)	1470
Eco88I	CYCGRG	2 cut(s)	410, 1854
EcoO109I	RGGNCCY	1 cut(s)	748
EcoT14I	CCWWGG	6 cut(s)	416, 576, 661, 698, 876, 2164
EcoT22I	ATGCAT	1 cut(s)	1053
ErhI	CCWWGG	6 cut(s)	416, 576, 661, 698, 876, 2164
FaqI	GGGAC	5 cut(s)	34, 83, 734, 1825, 2146
FauI	CCCGC	2 cut(s)	346, 1430
FauNDI	CATATG	1 cut(s)	927
FbaI	TGATCA	5 cut(s)	463, 961, 1192, 1303, 2137
Fnu4HI	GCNGC	8 cut(s)	299, 342, 1113, 1636, 1671, 1692, 1973, 2233
FokI	GGATG	7 cut(s)	341, 632, 717, 1013, 1102, 1147, 1348
Fsp4HI	GCNGC	8 cut(s)	299, 342, 1113, 1636, 1671, 1692, 1973, 2233
FspBI	CTAG	6 cut(s)	417, 636, 941, 1625, 1989, 2196
GlaI	GCGC	3 cut(s)	1639, 1926, 2222
GluI	GCNGC	8 cut(s)	299, 342, 1113, 1636, 1671, 1692, 1973, 2233
GsuI	CTGGAG	4 cut(s)	1077, 1212, 1680, 2139
HaeII	RGCGCY	1 cut(s)	1928
HaeIII	GGCC	7 cut(s)	117, 421, 932, 1409, 1967, 1993, 2041
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	3 cut(s)	1640, 1927, 2223
Hin1I	GRCGYC	1 cut(s)	23
Hin6I	GCGC	3 cut(s)	1638, 1925, 2221
HinP1I	GCGC	3 cut(s)	1638, 1925, 2221
HincII	GTYRAC	1 cut(s)	350
HindII	GTYRAC	1 cut(s)	350
HindIII	AAGCTT	2 cut(s)	1101, 1421
HinfI	GANTC	8 cut(s)	5, 446, 1021, 1238, 1525, 2012, 2159, 2261
HphI	GGTGA	4 cut(s)	167, 1313, 1922, 2035
Hpy166II	GTNNAC	4 cut(s)	99, 350, 883, 948
Hpy188I	TCNGA	9 cut(s)	231, 321, 772, 966, 1894, 1933, 1945, 1980, 2017
Hpy8I	GTNNAC	4 cut(s)	99, 350, 883, 948
Hpy99I	CGWCG	7 cut(s)	20, 146, 404, 445, 1415, 1613, 1616
HpyCH4III	ACNGT	1 cut(s)	1750
HpyCH4IV	ACGT	5 cut(s)	15, 1166, 1198, 1370, 1608
HpyCH4V	TGCA	9 cut(s)	181, 188, 344, 397, 757, 1051, 1145, 1400, 1694
HpySE526I	ACGT	5 cut(s)	15, 1166, 1198, 1370, 1608
Hsp92I	GRCGYC	1 cut(s)	23
HspAI	GCGC	3 cut(s)	1638, 1925, 2221
KflI	GGGWCCC	1 cut(s)	748
Kpn2I	TCCGGA	1 cut(s)	1682
KpnI	GGTACC	1 cut(s)	239
Ksp22I	TGATCA	5 cut(s)	463, 961, 1192, 1303, 2137
LmnI	GCTCC	5 cut(s)	640, 1542, 1776, 1800, 2218
Lsp1109I	GCAGC	4 cut(s)	328, 1678, 1682, 1984
LweI	GCATC	5 cut(s)	175, 739, 1124, 1169, 1782
MaeI	CTAG	6 cut(s)	417, 636, 941, 1625, 1989, 2196
MaeII	ACGT	5 cut(s)	15, 1166, 1198, 1370, 1608
MaeIII	GTNAC	9 cut(s)	385, 712, 820, 844, 973, 1088, 1343, 1729, 2005
MbiI	CCGCTC	1 cut(s)	1029
MflI	RGATCY	1 cut(s)	913
MhlI	GDGCHC	3 cut(s)	645, 1292, 1781
MluCI	AATT	8 cut(s)	248, 363, 424, 468, 1005, 1011, 1307, 1457
MlyI	GAGTC	5 cut(s)	14, 455, 2021, 2168, 2270
MmeI	TCCRAC	2 cut(s)	497, 1249
Mph1103I	ATGCAT	1 cut(s)	1053
MroI	TCCGGA	1 cut(s)	1682
MroXI	GAANNNNTTC	1 cut(s)	95
MseI	TTAA	2 cut(s)	1209, 1464
MslI	CAYNNNNRTG	2 cut(s)	1263, 1784
MspA1I	CMGCKG	3 cut(s)	341, 1691, 1817
MvnI	CGCG	3 cut(s)	1640, 2223, 2232
NciI	CCSGG	7 cut(s)	764, 1768, 1855, 1856, 1876, 1908, 2266
NdeI	CATATG	1 cut(s)	927
NlaIV	GGNNCC	5 cut(s)	237, 749, 750, 915, 2040
NmeAIII	GCCGAG	1 cut(s)	1993
NmuCI	GTSAC	3 cut(s)	385, 820, 2005
NsiI	ATGCAT	1 cut(s)	1053
NspI	RCATGY	2 cut(s)	1051, 1055
PaeI	GCATGC	2 cut(s)	1051, 1055
PaeR7I	CTCGAG	1 cut(s)	410
PceI	AGGCCT	1 cut(s)	1993
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 141, 408
PdmI	GAANNNNTTC	1 cut(s)	95
PfeI	GAWTC	3 cut(s)	1021, 1238, 1525
PflFI	GACNNNGTC	2 cut(s)	445, 2011
PfoI	TCCNGGA	1 cut(s)	2264
PkrI	GCNGC	8 cut(s)	300, 343, 1114, 1637, 1672, 1693, 1974, 2234
Ple19I	CGATCG	1 cut(s)	778
PleI	GAGTC	5 cut(s)	13, 454, 2020, 2167, 2269
PpsI	GAGTC	5 cut(s)	13, 454, 2020, 2167, 2269
PpuMI	RGGWCCY	1 cut(s)	748
PshAI	GACNNNNGTC	4 cut(s)	591, 818, 831, 1748
Psp5II	RGGWCCY	1 cut(s)	748
PspN4I	GGNNCC	5 cut(s)	237, 749, 750, 915, 2040
PspPI	GGNCC	6 cut(s)	748, 889, 980, 1680, 2039, 2062
PspPPI	RGGWCCY	1 cut(s)	748
PstI	CTGCAG	1 cut(s)	1402
PstNI	CAGNNNCTG	2 cut(s)	1598, 1733
PsuI	RGATCY	1 cut(s)	913
PsyI	GACNNNGTC	2 cut(s)	445, 2011
PvuI	CGATCG	1 cut(s)	778
PvuII	CAGCTG	2 cut(s)	1691, 1817
RsaI	GTAC	8 cut(s)	237, 278, 336, 569, 1588, 1807, 1843, 2182
RsaNI	GTAC	8 cut(s)	236, 277, 335, 568, 1587, 1806, 1842, 2181
RseI	CAYNNNNRTG	2 cut(s)	1263, 1784
SaqAI	TTAA	2 cut(s)	1209, 1464
SatI	GCNGC	8 cut(s)	299, 342, 1113, 1636, 1671, 1692, 1973, 2233
Sau96I	GGNCC	6 cut(s)	748, 889, 980, 1680, 2039, 2062
SchI	GAGTC	5 cut(s)	14, 455, 2021, 2168, 2270
SduI	GDGCHC	3 cut(s)	645, 1292, 1781
SfaNI	GCATC	5 cut(s)	175, 739, 1124, 1169, 1782
SfcI	CTRYAG	2 cut(s)	1398, 1491
Sfr274I	CTCGAG	1 cut(s)	410
SinI	GGWCC	5 cut(s)	748, 889, 980, 1680, 2062
SlaI	CTCGAG	1 cut(s)	410
SmaI	CCCGGG	1 cut(s)	1856
SmiMI	CAYNNNNRTG	2 cut(s)	1263, 1784
SmlI	CTYRAG	1 cut(s)	410
SmoI	CTYRAG	1 cut(s)	410
SphI	GCATGC	2 cut(s)	1051, 1055
Sse9I	AATT	8 cut(s)	248, 363, 424, 468, 1005, 1011, 1307, 1457
SseBI	AGGCCT	1 cut(s)	1993
SspMI	CTAG	6 cut(s)	417, 636, 941, 1625, 1989, 2196
StuI	AGGCCT	1 cut(s)	1993
StyI	CCWWGG	6 cut(s)	416, 576, 661, 698, 876, 2164
TaaI	ACNGT	1 cut(s)	1750
TaiI	ACGT	5 cut(s)	18, 1169, 1201, 1373, 1611
TaqI	TCGA	5 cut(s)	126, 411, 492, 1073, 1790
TaqII	GACCGA	1 cut(s)	906
TasI	AATT	8 cut(s)	248, 363, 424, 468, 1005, 1011, 1307, 1457
TatI	WGTACW	2 cut(s)	567, 1805
TauI	GCSGC	4 cut(s)	301, 1115, 1638, 2235
TfiI	GAWTC	3 cut(s)	1021, 1238, 1525
Tru1I	TTAA	2 cut(s)	1209, 1464
Tru9I	TTAA	2 cut(s)	1209, 1464
TscAI	CASTG	3 cut(s)	390, 1297, 2152
TseFI	GTSAC	3 cut(s)	385, 820, 2005
TseI	GCWGC	4 cut(s)	341, 1670, 1691, 1972
Tsp45I	GTSAC	3 cut(s)	385, 820, 2005
TspDTI	ATGAA	6 cut(s)	101, 135, 356, 1017, 1095, 1350
TspGWI	ACGGA	2 cut(s)	361, 458
TspMI	CCCGGG	1 cut(s)	1854
TspRI	CASTG	3 cut(s)	390, 1297, 2152
Tth111I	GACNNNGTC	2 cut(s)	445, 2011
VpaK11BI	GGWCC	5 cut(s)	748, 889, 980, 1680, 2062
XapI	RAATTY	4 cut(s)	248, 363, 468, 1457
XceI	RCATGY	2 cut(s)	1051, 1055
XcmI	CCANNNNNNNNNTGG	2 cut(s)	883, 1655
XhoI	CTCGAG	1 cut(s)	410
XmaI	CCCGGG	1 cut(s)	1854
XmaJI	CCTAGG	1 cut(s)	416
XmnI	GAANNNNTTC	1 cut(s)	95
XspI	CTAG	6 cut(s)	417, 636, 941, 1625, 1989, 2196
Zsp2I	ATGCAT	1 cut(s)	1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.