Prupe.2G294400_v2.0.a1

Low-temperature-induced 65 kDa

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
28616924 .. 28620296
3373 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G294400.4

Sequence Viewer

Length: 2301 bp
ATGGATTCTCATGATCAGGAGCACAACAGGGACCCCCAACATCTTGGTACACACCAAGGCGAAGATGAGGATCACCATGAGAAGAAATCGGTTTTGAAGAAGATGAAGGAGAAGGCAAAGAAGATAAAGGACACGCTCACAAAGCCTGGCCATGGCCATGATCATCAGGAAGGTCATATCCCTGATGATCATGATCTGGATGAGGAAGATGATGAAGCAGACGAAGACGCAGAAAAGCATGGTGCAACATCAATTAGGAGCGGTGTTCCTGAGCAAGGAGACATTTTGAAGGTGCCTCAGGTCAAATTTGGAGACACCAAAGCCATTCATGATGATCTTGTAGGGTCAAATTTGGAGAGTACCGACGTCAAAATTAGTGATCCCATGAGGGATTATGTGCAACCAGAACCAGGGGTGATGCTGATGCATGATGATGTTCTTGAGCCAATGGATTACAGTGGCTCAACAATGGGATCTGTTCTTGGTGGGCATGAAGAAATTTCAGGGCAACCCAATGTTAATTTTGGAAGAACATCAGAAATGGGGGGAGGACTTCATGCCCCACAGAATACCCCTGTTTCTTCTTTGGGAGAGTACAAGTCCAAGGTCACTGACCCAGGTCACACTTTTGCTCATGGGAAGGAAGGGCATTTAGGTCAATCCAGGGTGGACACCACCCTTGTTTCTTCTTTGGGAGAGTATAAGTCCAAGGTCACTGACCCAAGTCAAACTTTTGCTCATGGGAAGGAAGGGCATTTAGGTCAATCCAGGGTGGACACCACCCCTGTTGCTTCTTTGGGAGAGTATAAGTCCAAGGTCACTGACCCAAGCCAAACTTCTGCTCATGGGAAGGAAGGGCGTTTTGGGAAGGAAGGGCATTTTGGTCAATCCAGGGTGGACACCACCCCTGTTGCTTCTTTGGGAGAGGACAAGTCCAAGGTCACTGACCCAAGCCAAACTTCTGCTCATGGGAAGGAAGGGCGTTTTGGGAAGGAAGGGCATTTTGGTCAATCCAGGGTGGACACCACCCCTGTTGCTTCTTTGGGAGAGTACAAGTCCAAGGTCACTGACCCAAGTCAAACTTCTGCTCATGGGAAGGAAGGGCATTTAGGTCAATCCAGGGTGGACACCACCCCTGTTTCTTCTTTGGAAGAGTACAAGTCCAAGGTCACTGACCCAAGTCAAACTTTTGCTCATGGGAAGGAAGGGCATTTAGGTCAATCCGGGGTGGACACCACCCCTGTTTCTTCTTTGGAAACTTTTGCTTCTGGGAACGAAGGGCATTTAGGGCAATCCAGGGTCAATTTGGAGCGACCAAGAGGATTGGAAGAGGATCCTAATCCACAGGCTTATACTCCTTCAAATTATCAGAACAAAGTCACTGATCCAACTAATGCAGGTGGTGAAGAAGTAGGAATTACACCAATTCTTCACTCCCTTGATAAGATGAATATCCATGATGGAACTGAGCAGAGCAGCTACACAGACAAAATTCCTTCTGCCCCATCTGCTATTGCTGACAAGGCAATCTCTGCAAAAAATGTTGTTGGTTCCAAGCTGGGATATGGGGGGAACAATGATCAACATGGAGATATTGAGCCTCAGGCTTGTACTGCTTCAAGTAATGCAGGTGGTGGTGATGAACAAAAACCACACCAAAATCTGAGCACTGGAAGCCATGACCAGTTTTCTGCTGAGAGACCATCAAACCAGAGCAGCACCTATACTGAGAAAATTTCATCTGCCACATCTGCTATAGCCGACAAGGTAATATCTGCTAAGAACGTCGTCGCTTCCAAAGTCGGGTATGGAGGGAACAATGATGATGATCATCATCAGGAGGTTACAGCAAAGCCTGGTGGACCAACGTCGCCTGAACCGCATGGCAAAGGAGTTTCACAAAGCAAAGCCGGCCTAGACAAAGGAGTTTCTGTGAAGGACTATTTTGCTGAGAAGTTGAAGCCTGGCGAGGAGGACAGGGCTCTTTCTGAGGTGATATCAGAAGCTCTGCATAAGCCCAAGGCAGAGGACTCTGCTCGGCCTGTGGGGAAGGTGACCGAGTCGGAGGAAGTGACGAGGCGCTTGGGTCCAGATTGTGGAATTGAGAGGGTTGAGCAATCTAGCTATGGGAAGATTGTTTCTGATGCGGTTAAAGGCGCTGTTGGTTCATTGTTTGGGAAAGTTGATGAAAACCCTTCTTCTCAGCAGTCCACTGGTTCTTCAACCGGTGGTACAGATGGTTTGTCCAGTTCTGGAAGTGGGGCAGCAGAGCACCCAAGTCTTCAGGGGTCGGGCAACTGA

Protein Analysis

767

Amino Acids

81.07

Weight (kDa)

5.38

Isoelectric Point (pI)

35.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1388, 1619
AatII GACGTC 1 cut(s) 369
Acc36I ACCTGC 2 cut(s) 1388, 1619
AccB1I GGYRCC 1 cut(s) 292
AccB7I CCANNNNNTGG 1 cut(s) 2096
AccBSI CCGCTC 1 cut(s) 261
AciI CCGC 3 cut(s) 261, 1880, 2147
AclWI GGATC 6 cut(s) 78, 374, 481, 1328, 1341, 1379
AcoI YGGCCR 2 cut(s) 148, 154
AcsI RAATTY 5 cut(s) 305, 349, 498, 1491, 1734
AcuI CTGAAG 1 cut(s) 2267
AcyI GRCGYC 1 cut(s) 366
AfaI GTAC 7 cut(s) 49, 361, 596, 1052, 1157, 1612, 2233
AfiI CCNNNNNNNGG 5 cut(s) 152, 275, 410, 1803, 2096
AgeI ACCGGT 1 cut(s) 2225
AgsI TTSAA 6 cut(s) 97, 289, 1362, 1620, 1960, 2223
AluBI AGCT 4 cut(s) 1479, 1558, 2006, 2124
AluI AGCT 4 cut(s) 1479, 1558, 2006, 2124
Alw21I GWGCWC 3 cut(s) 24, 1670, 2274
Alw26I GTCTC 3 cut(s) 273, 306, 1693
AlwI GGATC 6 cut(s) 78, 374, 481, 1328, 1341, 1379
AoxI GGCC 4 cut(s) 148, 154, 1912, 2039
ApeKI GCWGC 3 cut(s) 1476, 1716, 2264
ApoI RAATTY 5 cut(s) 305, 349, 498, 1491, 1734
AsiGI ACCGGT 1 cut(s) 2225
AspLEI GCGC 2 cut(s) 2082, 2159
AspS9I GGNCC 3 cut(s) 31, 1862, 2087
AsuC2I CCSGG 1 cut(s) 1225
AsuHPI GGTGA 6 cut(s) 65, 427, 1415, 1649, 2005, 2065
AvaII GGWCC 3 cut(s) 31, 1862, 2087
AxyI CCTNAGG 2 cut(s) 297, 1602
BalI TGGCCA 2 cut(s) 150, 156
BamHI GGATCC 1 cut(s) 1333
BanI GGYRCC 1 cut(s) 292
BanII GRGCYC 1 cut(s) 1984
BbsI GAAGAC 2 cut(s) 231, 2273
Bbv12I GWGCWC 3 cut(s) 24, 1670, 2274
BbvI GCAGC 3 cut(s) 1488, 1728, 2276
BccI CCATC 4 cut(s) 1454, 1513, 1711, 2231
BclI TGATCA 5 cut(s) 13, 160, 187, 1579, 1828
BcnI CCSGG 1 cut(s) 1225
BcoDI GTCTC 3 cut(s) 273, 306, 1693
BfaI CTAG 2 cut(s) 1916, 2121
BfmI CTRYAG 1 cut(s) 1755
BfoI RGCGCY 2 cut(s) 2083, 2160
BfuAI ACCTGC 2 cut(s) 1388, 1619
BisI GCNGC 3 cut(s) 1477, 1717, 2265
BlsI GCNGC 3 cut(s) 1478, 1718, 2266
Bme18I GGWCC 3 cut(s) 31, 1862, 2087
BmgT120I GGNCC 3 cut(s) 31, 1862, 2087
BmiI GGNNCC 6 cut(s) 32, 33, 294, 1335, 1552, 2088
BmsI GCATC 3 cut(s) 408, 414, 2134
BoxI GACNNNNGTC 5 cut(s) 618, 723, 1074, 1179, 1867
BpiI GAAGAC 2 cut(s) 231, 2273
Bpu10I CCTNAGC 1 cut(s) 270
BpuEI CTTGAG 1 cut(s) 461
BpuMI CCSGG 1 cut(s) 1225
BsaBI GATNNNNATC 7 cut(s) 69, 192, 1338, 1451, 1827, 1830, 1833
BsaHI GRCGYC 1 cut(s) 366
BsaI GGTCTC 1 cut(s) 1693
BsaWI WCCGGW 1 cut(s) 2225
BsaXI ACNNNNNCTCC 2 cut(s) 1917, 1947
Bsc4I CCNNNNNNNGG 5 cut(s) 152, 275, 410, 1803, 2096
Bse118I RCCGGY 2 cut(s) 1910, 2225
Bse1I ACTGG 4 cut(s) 1675, 1684, 2218, 2247
Bse21I CCTNAGG 2 cut(s) 297, 1602
Bse8I GATNNNNATC 7 cut(s) 69, 192, 1338, 1451, 1827, 1830, 1833
BseGI GGATG 1 cut(s) 205
BseJI GATNNNNATC 7 cut(s) 69, 192, 1338, 1451, 1827, 1830, 1833
BseLI CCNNNNNNNGG 5 cut(s) 152, 275, 410, 1803, 2096
BseNI ACTGG 4 cut(s) 1675, 1684, 2218, 2247
BseRI GAGGAG 1 cut(s) 1985
BseXI GCAGC 3 cut(s) 1488, 1728, 2276
BseYI CCCAGC 1 cut(s) 1558
BshFI GGCC 4 cut(s) 150, 156, 1914, 2041
BshNI GGYRCC 1 cut(s) 292
BshTI ACCGGT 1 cut(s) 2225
BsiHKAI GWGCWC 3 cut(s) 24, 1670, 2274
BsiSI CCGG 3 cut(s) 1224, 1911, 2226
BslFI GGGAC 1 cut(s) 44
BslI CCNNNNNNNGG 5 cut(s) 152, 275, 410, 1803, 2096
BsmAI GTCTC 3 cut(s) 273, 306, 1693
BsmFI GGGAC 1 cut(s) 44
BsnI GGCC 4 cut(s) 150, 156, 1914, 2041
Bso31I GGTCTC 1 cut(s) 1693
Bsp1286I GDGCHC 4 cut(s) 24, 1670, 1984, 2274
Bsp19I CCATGG 1 cut(s) 151
BspACI CCGC 3 cut(s) 261, 1880, 2147
BspANI GGCC 4 cut(s) 150, 156, 1914, 2041
BspHI TCATGA 3 cut(s) 10, 190, 328
BspLI GGNNCC 6 cut(s) 32, 33, 294, 1335, 1552, 2088
BspMI ACCTGC 2 cut(s) 1388, 1619
BspPI GGATC 6 cut(s) 78, 374, 481, 1328, 1341, 1379
BspT107I GGYRCC 1 cut(s) 292
BspTNI GGTCTC 1 cut(s) 1693
BsrBI CCGCTC 1 cut(s) 261
BsrFI RCCGGY 2 cut(s) 1910, 2225
BsrI ACTGG 4 cut(s) 1675, 1684, 2218, 2247
BssAI RCCGGY 2 cut(s) 1910, 2225
BssNI GRCGYC 1 cut(s) 366
BssT1I CCWWGG 9 cut(s) 55, 151, 603, 708, 813, 936, 1059, 1164, 2019
Bst4CI ACNGT 1 cut(s) 458
Bst6I CTCTTC 2 cut(s) 1146, 1323
BstACI GRCGYC 1 cut(s) 366
BstAPI GCANNNNNTGC 1 cut(s) 1532
BstC8I GCNNGC 1 cut(s) 1912
BstDSI CCRYGG 1 cut(s) 151
BstEII GGTNACC 1 cut(s) 2053
BstENI CCTNNNNNAGG 1 cut(s) 273
BstF5I GGATG 1 cut(s) 205
BstH2I RGCGCY 2 cut(s) 2083, 2160
BstHHI GCGC 2 cut(s) 2082, 2159
BstMAI GTCTC 3 cut(s) 273, 306, 1693
BstPAI GACNNNNGTC 5 cut(s) 618, 723, 1074, 1179, 1867
BstPI GGTNACC 1 cut(s) 2053
BstSFI CTRYAG 1 cut(s) 1755
BstV1I GCAGC 3 cut(s) 1488, 1728, 2276
BstV2I GAAGAC 2 cut(s) 231, 2273
BstX2I RGATCY 2 cut(s) 473, 1333
BstXI CCANNNNNNTGG 1 cut(s) 44
BstYI RGATCY 2 cut(s) 473, 1333
Bsu36I CCTNAGG 2 cut(s) 297, 1602
BsuRI GGCC 4 cut(s) 150, 156, 1914, 2041
BtgI CCRYGG 1 cut(s) 151
BtsCI GGATG 1 cut(s) 205
BveI ACCTGC 2 cut(s) 1388, 1619
Cac8I GCNNGC 1 cut(s) 1912
CciI TCATGA 3 cut(s) 10, 190, 328
CfoI GCGC 2 cut(s) 2082, 2159
Cfr10I RCCGGY 2 cut(s) 1910, 2225
Cfr13I GGNCC 3 cut(s) 31, 1862, 2087
CseI GACGC 1 cut(s) 236
Csp6I GTAC 7 cut(s) 48, 360, 595, 1051, 1156, 1611, 2232
CspAI ACCGGT 1 cut(s) 2225
CspCI CAANNNNNGTGG 6 cut(s) 769, 804, 892, 927, 1015, 1050
CviQI GTAC 7 cut(s) 48, 360, 595, 1051, 1156, 1611, 2232
EaeI YGGCCR 2 cut(s) 148, 154
Eam1104I CTCTTC 2 cut(s) 1146, 1323
EarI CTCTTC 2 cut(s) 1146, 1323
Eco130I CCWWGG 9 cut(s) 55, 151, 603, 708, 813, 936, 1059, 1164, 2019
Eco24I GRGCYC 1 cut(s) 1984
Eco31I GGTCTC 1 cut(s) 1693
Eco32I GATATC 1 cut(s) 1998
Eco47I GGWCC 3 cut(s) 31, 1862, 2087
Eco57I CTGAAG 1 cut(s) 2267
Eco81I CCTNAGG 2 cut(s) 297, 1602
Eco91I GGTNACC 1 cut(s) 2053
EcoNI CCTNNNNNAGG 1 cut(s) 273
EcoO109I RGGNCCY 1 cut(s) 31
EcoO65I GGTNACC 1 cut(s) 2053
EcoRV GATATC 1 cut(s) 1998
EcoT14I CCWWGG 9 cut(s) 55, 151, 603, 708, 813, 936, 1059, 1164, 2019
EcoT22I ATGCAT 1 cut(s) 429
EcoT38I GRGCYC 1 cut(s) 1984
ErhI CCWWGG 9 cut(s) 55, 151, 603, 708, 813, 936, 1059, 1164, 2019
FaqI GGGAC 1 cut(s) 44
FbaI TGATCA 5 cut(s) 13, 160, 187, 1579, 1828
Fnu4HI GCNGC 3 cut(s) 1477, 1717, 2265
FokI GGATG 1 cut(s) 212
FriOI GRGCYC 1 cut(s) 1984
Fsp4HI GCNGC 3 cut(s) 1477, 1717, 2265
FspBI CTAG 2 cut(s) 1916, 2121
GlaI GCGC 2 cut(s) 2081, 2158
GluI GCNGC 3 cut(s) 1477, 1717, 2265
GsaI CCCAGC 1 cut(s) 1562
HaeII RGCGCY 2 cut(s) 2083, 2160
HaeIII GGCC 4 cut(s) 150, 156, 1914, 2041
HapII CCGG 3 cut(s) 1224, 1911, 2226
HgaI GACGC 1 cut(s) 236
HhaI GCGC 2 cut(s) 2082, 2159
Hin1I GRCGYC 1 cut(s) 366
Hin6I GCGC 2 cut(s) 2080, 2157
HinP1I GCGC 2 cut(s) 2080, 2157
HinfI GANTC 3 cut(s) 5, 2030, 2060
HpaII CCGG 3 cut(s) 1224, 1911, 2226
HphI GGTGA 6 cut(s) 65, 427, 1415, 1649, 2005, 2065
Hpy166II GTNNAC 9 cut(s) 50, 670, 775, 898, 1021, 1126, 1231, 1862, 2211
Hpy188I TCNGA 7 cut(s) 538, 1371, 1665, 1990, 2002, 2065, 2143
Hpy8I GTNNAC 9 cut(s) 50, 670, 775, 898, 1021, 1126, 1231, 1862, 2211
Hpy99I CGWCG 4 cut(s) 368, 1790, 1793, 1873
HpyCH4III ACNGT 1 cut(s) 458
HpyCH4IV ACGT 3 cut(s) 366, 1785, 1868
HpyCH4V TGCA 7 cut(s) 245, 400, 427, 1397, 1535, 1628, 2011
HpySE526I ACGT 3 cut(s) 366, 1785, 1868
Hsp92I GRCGYC 1 cut(s) 366
HspAI GCGC 2 cut(s) 2080, 2157
KflI GGGWCCC 1 cut(s) 31
KroI GCCGGC 1 cut(s) 1910
KroNI GCCGGC 1 cut(s) 1912
Ksp22I TGATCA 5 cut(s) 13, 160, 187, 1579, 1828
LmnI GCTCC 3 cut(s) 19, 258, 1309
Lsp1109I GCAGC 3 cut(s) 1488, 1728, 2276
LweI GCATC 3 cut(s) 408, 414, 2134
MaeI CTAG 2 cut(s) 1916, 2121
MaeII ACGT 3 cut(s) 366, 1785, 1868
MbiI CCGCTC 1 cut(s) 261
MflI RGATCY 2 cut(s) 473, 1333
MhlI GDGCHC 4 cut(s) 24, 1670, 1984, 2274
MlsI TGGCCA 2 cut(s) 150, 156
MluNI TGGCCA 2 cut(s) 150, 156
MlyI GAGTC 2 cut(s) 2024, 2069
MmeI TCCRAC 2 cut(s) 1412, 2043
Mox20I TGGCCA 2 cut(s) 150, 156
Mph1103I ATGCAT 1 cut(s) 429
MroNI GCCGGC 1 cut(s) 1910
MscI TGGCCA 2 cut(s) 150, 156
MseI TTAA 2 cut(s) 519, 2151
MslI CAYNNNNRTG 2 cut(s) 156, 432
Msp20I TGGCCA 2 cut(s) 150, 156
MspI CCGG 3 cut(s) 1224, 1911, 2226
NaeI GCCGGC 1 cut(s) 1912
NciI CCSGG 1 cut(s) 1225
NcoI CCATGG 1 cut(s) 151
NgoMIV GCCGGC 1 cut(s) 1910
NlaIV GGNNCC 6 cut(s) 32, 33, 294, 1335, 1552, 2088
NmeAIII GCCGAG 1 cut(s) 2017
NsiI ATGCAT 1 cut(s) 429
PagI TCATGA 3 cut(s) 10, 190, 328
PaqCI CACCTGC 2 cut(s) 1388, 1619
PdiI GCCGGC 1 cut(s) 1912
PfeI GAWTC 1 cut(s) 5
PflFI GACNNNGTC 1 cut(s) 2059
PflMI CCANNNNNTGG 1 cut(s) 2096
PinAI ACCGGT 1 cut(s) 2225
PkrI GCNGC 3 cut(s) 1478, 1718, 2266
PleI GAGTC 2 cut(s) 2024, 2068
PpsI GAGTC 2 cut(s) 2024, 2068
PpuMI RGGWCCY 1 cut(s) 31
PshAI GACNNNNGTC 5 cut(s) 618, 723, 1074, 1179, 1867
Psp5II RGGWCCY 1 cut(s) 31
PspEI GGTNACC 1 cut(s) 2053
PspFI CCCAGC 1 cut(s) 1558
PspN4I GGNNCC 6 cut(s) 32, 33, 294, 1335, 1552, 2088
PspPI GGNCC 3 cut(s) 31, 1862, 2087
PspPPI RGGWCCY 1 cut(s) 31
PsuI RGATCY 2 cut(s) 473, 1333
PsyI GACNNNGTC 1 cut(s) 2059
RsaI GTAC 7 cut(s) 49, 361, 596, 1052, 1157, 1612, 2233
RsaNI GTAC 7 cut(s) 48, 360, 595, 1051, 1156, 1611, 2232
RseI CAYNNNNRTG 2 cut(s) 156, 432
SaqAI TTAA 2 cut(s) 519, 2151
SatI GCNGC 3 cut(s) 1477, 1717, 2265
Sau96I GGNCC 3 cut(s) 31, 1862, 2087
SchI GAGTC 2 cut(s) 2024, 2069
SduI GDGCHC 4 cut(s) 24, 1670, 1984, 2274
SfaNI GCATC 3 cut(s) 408, 414, 2134
SfcI CTRYAG 1 cut(s) 1755
SinI GGWCC 3 cut(s) 31, 1862, 2087
SmiMI CAYNNNNRTG 2 cut(s) 156, 432
SmlI CTYRAG 1 cut(s) 440
SmoI CTYRAG 1 cut(s) 440
SsiI CCGC 3 cut(s) 261, 1880, 2147
SspMI CTAG 2 cut(s) 1916, 2121
StyI CCWWGG 9 cut(s) 55, 151, 603, 708, 813, 936, 1059, 1164, 2019
TaaI ACNGT 1 cut(s) 458
TaiI ACGT 3 cut(s) 369, 1788, 1871
TaqII GACCGA 1 cut(s) 2072
TatI WGTACW 4 cut(s) 594, 1050, 1155, 1610
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 2 cut(s) 519, 2151
Tru9I TTAA 2 cut(s) 519, 2151
TseI GCWGC 3 cut(s) 1476, 1716, 2264
Tth111I GACNNNGTC 1 cut(s) 2059
Van91I CCANNNNNTGG 1 cut(s) 2096
VpaK11BI GGWCC 3 cut(s) 31, 1862, 2087
XagI CCTNNNNNAGG 1 cut(s) 273
XapI RAATTY 5 cut(s) 305, 349, 498, 1491, 1734
XcmI CCANNNNNNNNNTGG 1 cut(s) 1303
XspI CTAG 2 cut(s) 1916, 2121
ZraI GACGTC 1 cut(s) 367
Zsp2I ATGCAT 1 cut(s) 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.