Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002096

Physical Location & Seq

Genomic Coordinates Forward (+)

64295304 .. 64298983

Gene Structure 3680 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ60087

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGATACTCATGTAGTACATTCTCGTGTTGAAGGTGAGGAGGAGGAGCACCATGAGAAGACGTCGGTTTTGAAGAAGGTGAAGGCGAGAGCGAGGAAGTTGAGGGATACTATCACAGGGCAGGGCAATCACGGCCATGAACCCGAAGGCCATCAGACTCCTGATAATGATCAAGATCTGGATGAGGAGGATGACGAAGATGTAGACGACCCAGATGTCCATGGTGCACCAAAATATGACTCGGCAGTTAAGAAAACTGATGCTCCTGTGCAAGGCGACATTTTGAAGGTGCCTGTGGGGAATTTCGGAGACACTAGAGCGGGGCATGATGAGCATGAACCTGTAGTTCCAAGGGAGAATTCTAATGTCAATGTCAGTGATCCATTGAGATCTAATGTGCCTGAGCTACATGGAACTACAGACCACGGTGCAATGCACAACTCTACCGCGACTAGGAAGACTGATGCTCCTGTGCAAGGAGGCATTCATTTTGGAGAGACGCACCATGAATATGATCCTGTAGTGCCAAAAGAGAGGTCTAATGTCGGAATAAGTGATCCGATGAGGGACTCTGTGCCTGGGCAAAATCGAACTACTACAGGGCATGAGGATCTTTTGGGAGGAGCAAGGACCAAACTGGCTGCTCCAACAACTGGACCTGTTCTTAAGCATGAAGAGCCAAAGGGATTGGTTGATGTAATTGGAGGAGGTCCTCAGGCGTCGCATAACACCCCTGTTTCTTCTCTTCCTCATCATGGAAATTACAACACTAGTACCACTGATGTTGACCCAGGTAAGACTTTTGTCTCCGGGCAAGGAGAGCATTTAGGTCAGACTAGGGTCAAATTGGGGAATACTGATGTGCTAGGGGAAGGGACTCCCAAATTGGGGAAGACTGATGTACTAGGGGAAGGGACTCATGTGCCACAGAGTACCCCTGTTTCTTCTGGAACTCACAGAAGTGCCATGGACGTCGACCCTAGGCAGACATTTGTTTCCGGCCAGGGAGGGCAGTTAGGTCAGTCCAGGGTCAATTTGGACCGACCTAGCGGACTTGAGGAAGATCCTCATTCACCTAAGGCCAATCCTCAAGCTCACACTCCTTCAAATTACGAGACCGAAGTCACTGATCCCACTAAATCTGGTGGTGAGGAAATTGGAGTCACACCAATGCTCCATTCCTTCGATAAGATGAACCTTCAGGATGATGATTGCCAATACTTGAAGAACGGTGACAAACAAAACCCGTCTACCGGAAGCCATGACCAACTCTCTCCTGATAAACCATCGAACCAGGGCAGCAGCTACACTGAAAAAATCTCATATGCCACTTCAGCCATTGCCGACAAGGCAATTGCGGCAAAGAATGTAGTTGCTTCCAAGTTGGGATATGGCGGGAATGAGCCTGATCATGATGACTACTCGAGAGGCTATGTTACTGGTGCTGGGAAGTCTGGTTCATCACCTCGGAACAAAGTACTTGATCCCTCTACTAACCAATTCATACCAGCAGAGACTCCACAAGTCCGAGGAACCATCAAACCGGACGATGTCCCCACAACTGATCAGAAGCCAGTTCAGACGGGCGGAAGCTACACTGAGAGGATTTCATTTGCGGGATCTGCCATTGCTGACAAGGCGATGTCCGCAAAGAATGTTGTTGCTTCCAAGCTGGGATATGGGGCAACTGATCAGGTGCATGACAGGGAAAATGTTACTCGCACTAATGTGCAGTCTGGGACATCGGCAGCGGACGGCAATACGATTACCTCTAATCAAGCCGGACAGAACAAAGGGGTGTCTGTGAAGGACTATTTCGTGGAGAAGCTGAGGCCCGGAGAGGAGGACAAAGCGCTTTCGGAGGTTATAAGTGAGACATTACACAAGCCTAAGCCGGGTGTTAAGCAAGAGACAGGGGACTCTGCTACTGCTAGGCCCAAGGGGAAGGTGACGGAGTCGGCTGAGGTGAGGCAGCGTTTGGGGAATACCGAGGGGAATGAGAATTTTGTGGTGGACAAGATTGAGGATAGTATTGGTTCAATGCTTGGTGGTACTGGTAAGAGTGATGAAGAACGTGGGCAAGGTCTCTCTAGCTCTGCTGCTACCGGGGAGGAAGATCAGCACCGGAGGGTACAAGTATCTGGCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008150 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009611 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009743 GO:0009755 GO:0009987 GO:0010033 GO:0010035 GO:0010150 GO:0010555 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042538 GO:0043207 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048511 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:1901700 GO:1901701 GO:1902074 GO:2000026 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAP160

Protein Analysis

716

Amino Acids

76.26

Weight (kDa)

5.4

Isoelectric Point (pI)

31.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LTI65_LTI78_N	PF23403	16 - 83	4.4e-21	LTI65/LTI78 CAP160 N-terminal
LTI65_LTI78_NYQTKV	PF23402	343 - 403	7.3e-31	LTI65/LTI78 NYQTKV repeat
CAP160	PF07918	440 - 466	1.2e-14	CAP160 repeat
CAP160	PF07918	536 - 561	2.1e-12	CAP160 repeat
LTI65_PGEED	PF23399	598 - 627	4.5e-18	LTI65/LTI78 PGEED repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25580 AT4G25580 AT5G52300 AT5G52300 AT5G52310
fragaria_vesca	FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29491
malus_domestica	MD01G1201000.v1.1 MD07G1268800.v1.1
prunus_persica	Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1
pyrus_communis	pycom07g24640
rosa_chinensis	RchiOBHm_Chr1g0377291 RchiOBHm_Chr1g0377331
rosa_laevigata	RLG00000026530
rosa_multiflora	Rmu_co8507117.1_g000001 Rmu_sc0001944.1_g000005 Rmu_sc0017163.1_g000001 Rmu_sc0022060.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281320 Rroxscaffold_4G00281330
rosa_rugosa	Rorug01G0402700
rosa_samantha	Rh1AG420000 Rh1AG420500 Rh1BG379000 Rh1BG379100 Rh1BG379200 Rh1BG379300 Rh1CG393000 Rh1CG393100 Rh1CG393200 Rh1CG393300 Rh1DG409600 Rh1DG409700 Rh1DG409800 Rh1DG410300
rosa_wichuraiana	Rw1G036860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1868
AasI	GACNNNNNNGTC	1 cut(s)	215
AatII	GACGTC	2 cut(s)	65, 975
AccB1I	GGYRCC	1 cut(s)	289
AccB7I	CCANNNNNTGG	1 cut(s)	653
AccBSI	CCGCTC	1 cut(s)	320
AccI	GTMKAC	3 cut(s)	204, 975, 1250
AccII	CGCG	1 cut(s)	449
AciI	CCGC	9 cut(s)	320, 447, 1050, 1358, 1395, 1587, 1616, 1647, 1751
AclWI	GGATC	8 cut(s)	374, 509, 551, 618, 1058, 1124, 1478, 1627
AcoI	YGGCCR	2 cut(s)	133, 1000
AcsI	RAATTY	3 cut(s)	301, 358, 2002
AcuI	CTGAAG	2 cut(s)	1184, 1317
AcyI	GRCGYC	3 cut(s)	62, 719, 972
AfaI	GTAC	7 cut(s)	18, 775, 903, 934, 1479, 2053, 2133
AfeI	AGCGCT	1 cut(s)	1854
AfiI	CCNNNNNNNGG	9 cut(s)	272, 453, 476, 653, 755, 887, 888, 1253, 1895
AflII	CTTAAG	1 cut(s)	665
AgsI	TTSAA	6 cut(s)	32, 73, 286, 1107, 1225, 2040
AhlI	ACTAGT	1 cut(s)	770
AjnI	CCWGG	5 cut(s)	577, 790, 1002, 1025, 1293
AjuI	GAANNNNNNNTTGG	4 cut(s)	343, 375, 1162, 1194
AleI	CACNNNNGTG	2 cut(s)	960, 1727
AloI	GAACNNNNNNTCC	2 cut(s)	1441, 1473
AluBI	AGCT	7 cut(s)	406, 1094, 1305, 1593, 1672, 1828, 2094
AluI	AGCT	7 cut(s)	406, 1094, 1305, 1593, 1672, 1828, 2094
Alw21I	GWGCWC	2 cut(s)	51, 229
Alw26I	GTCTC	8 cut(s)	303, 491, 811, 1109, 1508, 1868, 1904, 2090
Alw44I	GTGCAC	1 cut(s)	225
AlwI	GGATC	8 cut(s)	374, 509, 551, 618, 1058, 1124, 1478, 1627
Ama87I	CYCGRG	1 cut(s)	1423
Aor51HI	AGCGCT	1 cut(s)	1854
AoxI	GGCC	6 cut(s)	133, 148, 1000, 1080, 1832, 1934
ApaLI	GTGCAC	1 cut(s)	225
ApeKI	GCWGC	6 cut(s)	641, 1299, 1302, 1748, 1972, 2099
ApoI	RAATTY	3 cut(s)	301, 358, 2002
ArsI	GACNNNNNNTTYG	4 cut(s)	52, 84, 521, 553
AspA2I	CCTAGG	1 cut(s)	980
AspLEI	GCGC	1 cut(s)	1855
AspS9I	GGNCC	6 cut(s)	630, 656, 710, 1039, 1833, 1935
AsuC2I	CCSGG	4 cut(s)	811, 1836, 1896, 2107
AsuHPI	GGTGA	8 cut(s)	47, 91, 1065, 1160, 1244, 1455, 1960, 1978
AvaI	CYCGRG	1 cut(s)	1423
AvaII	GGWCC	4 cut(s)	630, 656, 710, 1039
AvrII	CCTAGG	1 cut(s)	980
AxyI	CCTNAGG	2 cut(s)	714, 1077
BaeGI	GKGCMC	1 cut(s)	229
BaeI	ACNNNNGTAYC	3 cut(s)	30, 757, 790
BanI	GGYRCC	1 cut(s)	289
BauI	CACGAG	1 cut(s)	24
BbsI	GAAGAC	3 cut(s)	65, 464, 899
Bbv12I	GWGCWC	2 cut(s)	51, 229
BbvCI	CCTCAGC	2 cut(s)	1829, 1962
BbvI	GCAGC	6 cut(s)	628, 1311, 1314, 1760, 1984, 2086
BccI	CCATC	3 cut(s)	159, 1294, 1544
BceAI	ACGGC	2 cut(s)	148, 1771
BciT130I	CCWGG	5 cut(s)	579, 792, 1004, 1027, 1295
BciVI	GTATCC	1 cut(s)	100
BclI	TGATCA	4 cut(s)	169, 1408, 1564, 1690
BcnI	CCSGG	4 cut(s)	811, 1836, 1896, 2107
BcoDI	GTCTC	8 cut(s)	303, 491, 811, 1109, 1508, 1868, 1904, 2090
BcuI	ACTAGT	1 cut(s)	770
BfmI	CTRYAG	4 cut(s)	342, 417, 519, 597
BfoI	RGCGCY	1 cut(s)	1856
BfrI	CTTAAG	1 cut(s)	665
BfuI	GTATCC	1 cut(s)	100
BglI	GCCNNNNNGGC	1 cut(s)	1349
BglII	AGATCT	2 cut(s)	175, 389
BisI	GCNGC	7 cut(s)	642, 1300, 1303, 1359, 1749, 1973, 2100
BlnI	CCTAGG	1 cut(s)	980
BlsI	GCNGC	7 cut(s)	643, 1301, 1304, 1360, 1750, 1974, 2101
BmcAI	AGTACT	1 cut(s)	1479
Bme1390I	CCNGG	9 cut(s)	579, 792, 811, 1004, 1027, 1295, 1836, 1896, 2107
Bme18I	GGWCC	4 cut(s)	630, 656, 710, 1039
BmeT110I	CYCGRG	1 cut(s)	1423
BmgT120I	GGNCC	6 cut(s)	630, 656, 710, 1039, 1833, 1935
BmiI	GGNNCC	2 cut(s)	291, 1534
BmrFI	CCNGG	9 cut(s)	579, 792, 811, 1004, 1027, 1295, 1836, 1896, 2107
BmsI	GCATC	2 cut(s)	250, 454
BoxI	GACNNNNGTC	3 cut(s)	803, 839, 1121
BpiI	GAAGAC	3 cut(s)	65, 464, 899
Bpu10I	CCTNAGC	4 cut(s)	402, 1829, 1890, 1962
BpuEI	CTTGAG	2 cut(s)	1074, 1076
BpuMI	CCSGG	4 cut(s)	811, 1836, 1896, 2107
BsaBI	GATNNNNATC	2 cut(s)	168, 174
BsaHI	GRCGYC	3 cut(s)	62, 719, 972
BsaI	GGTCTC	2 cut(s)	1109, 2090
BsaWI	WCCGGW	3 cut(s)	1253, 1543, 2124
BsaXI	ACNNNNNCTCC	6 cut(s)	247, 277, 451, 481, 1158, 1188
Bsc4I	CCNNNNNNNGG	9 cut(s)	272, 453, 476, 653, 755, 887, 888, 1253, 1895
Bse1I	ACTGG	5 cut(s)	642, 658, 1444, 1574, 2059
Bse21I	CCTNAGG	2 cut(s)	714, 1077
Bse3DI	GCAATG	3 cut(s)	438, 1338, 1626
Bse8I	GATNNNNATC	2 cut(s)	168, 174
BseBI	CCWGG	5 cut(s)	579, 792, 1004, 1027, 1295
BseGI	GGATG	3 cut(s)	187, 196, 1210
BseJI	GATNNNNATC	2 cut(s)	168, 174
BseLI	CCNNNNNNNGG	9 cut(s)	272, 453, 476, 653, 755, 887, 888, 1253, 1895
BseMI	GCAATG	3 cut(s)	438, 1338, 1626
BseMII	CTCAG	5 cut(s)	393, 728, 1590, 1820, 1953
BseNI	ACTGG	5 cut(s)	642, 658, 1444, 1574, 2059
BseRI	GAGGAG	7 cut(s)	53, 56, 59, 200, 636, 720, 1856
BseSI	GKGCMC	1 cut(s)	229
BseXI	GCAGC	6 cut(s)	628, 1311, 1314, 1760, 1984, 2086
BseYI	CCCAGC	2 cut(s)	1445, 1672
BsgI	GTGCAG	1 cut(s)	1751
Bsh1236I	CGCG	1 cut(s)	449
BshFI	GGCC	6 cut(s)	135, 150, 1002, 1082, 1834, 1936
BshNI	GGYRCC	1 cut(s)	289
BsiHKAI	GWGCWC	2 cut(s)	51, 229
BsiHKCI	CYCGRG	1 cut(s)	1423
BsiSI	CCGG	9 cut(s)	810, 999, 1254, 1544, 1782, 1836, 1895, 2106, 2125
BslFI	GGGAC	6 cut(s)	581, 889, 928, 1538, 1753, 1931
BslI	CCNNNNNNNGG	9 cut(s)	272, 453, 476, 653, 755, 887, 888, 1253, 1895
BsmAI	GTCTC	8 cut(s)	303, 491, 811, 1109, 1508, 1868, 1904, 2090
BsmBI	CGTCTC	1 cut(s)	491
BsmFI	GGGAC	6 cut(s)	581, 889, 928, 1538, 1753, 1931
BsmI	GAATGC	1 cut(s)	483
BsnI	GGCC	6 cut(s)	135, 150, 1002, 1082, 1834, 1936
Bso31I	GGTCTC	2 cut(s)	1109, 2090
BsoBI	CYCGRG	1 cut(s)	1423
Bsp1286I	GDGCHC	2 cut(s)	51, 229
Bsp19I	CCATGG	2 cut(s)	220, 966
BspACI	CCGC	9 cut(s)	320, 447, 1050, 1358, 1395, 1587, 1616, 1647, 1751
BspANI	GGCC	6 cut(s)	135, 150, 1002, 1082, 1834, 1936
BspCNI	CTCAG	5 cut(s)	394, 727, 1591, 1821, 1954
BspFNI	CGCG	1 cut(s)	449
BspHI	TCATGA	1 cut(s)	1411
BspLI	GGNNCC	2 cut(s)	291, 1534
BspPI	GGATC	8 cut(s)	374, 509, 551, 618, 1058, 1124, 1478, 1627
BspQI	GCTCTTC	1 cut(s)	669
BspT107I	GGYRCC	1 cut(s)	289
BspTI	CTTAAG	1 cut(s)	665
BspTNI	GGTCTC	2 cut(s)	1109, 2090
BsrBI	CCGCTC	1 cut(s)	320
BsrDI	GCAATG	3 cut(s)	438, 1338, 1626
BsrI	ACTGG	5 cut(s)	642, 658, 1444, 1574, 2059
BssNI	GRCGYC	3 cut(s)	62, 719, 972
BssSI	CACGAG	1 cut(s)	24
BssT1I	CCWWGG	5 cut(s)	220, 350, 966, 980, 1938
Bst2BI	CACGAG	1 cut(s)	24
Bst2UI	CCWGG	5 cut(s)	579, 792, 1004, 1027, 1295
Bst4CI	ACNGT	2 cut(s)	428, 1232
Bst6I	CTCTTC	2 cut(s)	669, 750
BstACI	GRCGYC	3 cut(s)	62, 719, 972
BstAFI	CTTAAG	1 cut(s)	665
BstDEI	CTNAG	7 cut(s)	402, 714, 1077, 1599, 1829, 1890, 1962
BstDSI	CCRYGG	3 cut(s)	220, 424, 966
BstENI	CCTNNNNNAGG	2 cut(s)	270, 474
BstF5I	GGATG	3 cut(s)	187, 196, 1210
BstFNI	CGCG	1 cut(s)	449
BstH2I	RGCGCY	1 cut(s)	1856
BstHHI	GCGC	1 cut(s)	1855
BstMAI	GTCTC	8 cut(s)	303, 491, 811, 1109, 1508, 1868, 1904, 2090
BstNI	CCWGG	5 cut(s)	579, 792, 1004, 1027, 1295
BstPAI	GACNNNNGTC	3 cut(s)	803, 839, 1121
BstSCI	CCNGG	9 cut(s)	577, 790, 809, 1002, 1025, 1293, 1834, 1894, 2105
BstSFI	CTRYAG	4 cut(s)	342, 417, 519, 597
BstSLI	GKGCMC	1 cut(s)	229
BstUI	CGCG	1 cut(s)	449
BstV1I	GCAGC	6 cut(s)	628, 1311, 1314, 1760, 1984, 2086
BstV2I	GAAGAC	3 cut(s)	65, 464, 899
BstX2I	RGATCY	5 cut(s)	175, 389, 610, 1063, 1619
BstYI	RGATCY	5 cut(s)	175, 389, 610, 1063, 1619
Bsu36I	CCTNAGG	2 cut(s)	714, 1077
BsuI	GTATCC	1 cut(s)	100
BsuRI	GGCC	6 cut(s)	135, 150, 1002, 1082, 1834, 1936
BtgI	CCRYGG	3 cut(s)	220, 424, 966
BtgZI	GCGATG	1 cut(s)	1655
BtsCI	GGATG	3 cut(s)	187, 196, 1210
BtsIMutI	CAGTG	5 cut(s)	382, 777, 1125, 1308, 1596
CciI	TCATGA	1 cut(s)	1411
CfoI	GCGC	1 cut(s)	1855
Cfr13I	GGNCC	6 cut(s)	630, 656, 710, 1039, 1833, 1935
CseI	GACGC	2 cut(s)	508, 708
Csp6I	GTAC	7 cut(s)	17, 774, 902, 933, 1478, 2052, 2132
CspCI	CAANNNNNGTGG	2 cut(s)	766, 801
CviQI	GTAC	7 cut(s)	17, 774, 902, 933, 1478, 2052, 2132
DdeI	CTNAG	7 cut(s)	402, 714, 1077, 1599, 1829, 1890, 1962
DrdI	GACNNNNNNGTC	1 cut(s)	215
DseDI	GACNNNNNNGTC	1 cut(s)	215
EaeI	YGGCCR	2 cut(s)	133, 1000
Eam1104I	CTCTTC	2 cut(s)	669, 750
EarI	CTCTTC	2 cut(s)	669, 750
EciI	GGCGGA	1 cut(s)	1602
Eco130I	CCWWGG	5 cut(s)	220, 350, 966, 980, 1938
Eco31I	GGTCTC	2 cut(s)	1109, 2090
Eco47I	GGWCC	4 cut(s)	630, 656, 710, 1039
Eco47III	AGCGCT	1 cut(s)	1854
Eco57I	CTGAAG	2 cut(s)	1184, 1317
Eco81I	CCTNAGG	2 cut(s)	714, 1077
Eco88I	CYCGRG	1 cut(s)	1423
EcoNI	CCTNNNNNAGG	2 cut(s)	270, 474
EcoO109I	RGGNCCY	1 cut(s)	710
EcoRI	GAATTC	1 cut(s)	358
EcoRII	CCWGG	5 cut(s)	577, 790, 1002, 1025, 1293
EcoT14I	CCWWGG	5 cut(s)	220, 350, 966, 980, 1938
ErhI	CCWWGG	5 cut(s)	220, 350, 966, 980, 1938
Esp3I	CGTCTC	1 cut(s)	491
FaqI	GGGAC	6 cut(s)	581, 889, 928, 1538, 1753, 1931
FauI	CCCGC	3 cut(s)	313, 1388, 1609
FauNDI	CATATG	1 cut(s)	1324
FbaI	TGATCA	4 cut(s)	169, 1408, 1564, 1690
FblI	GTMKAC	3 cut(s)	204, 975, 1250
Fnu4HI	GCNGC	7 cut(s)	642, 1300, 1303, 1359, 1749, 1973, 2100
FokI	GGATG	3 cut(s)	194, 203, 1217
Fsp4HI	GCNGC	7 cut(s)	642, 1300, 1303, 1359, 1749, 1973, 2100
GlaI	GCGC	1 cut(s)	1854
GluI	GCNGC	7 cut(s)	642, 1300, 1303, 1359, 1749, 1973, 2100
GsaI	CCCAGC	2 cut(s)	1449, 1676
HaeII	RGCGCY	1 cut(s)	1856
HaeIII	GGCC	6 cut(s)	135, 150, 1002, 1082, 1834, 1936
HapII	CCGG	9 cut(s)	810, 999, 1254, 1544, 1782, 1836, 1895, 2106, 2125
HgaI	GACGC	2 cut(s)	508, 708
HhaI	GCGC	1 cut(s)	1855
Hin1I	GRCGYC	3 cut(s)	62, 719, 972
Hin6I	GCGC	1 cut(s)	1853
HinP1I	GCGC	1 cut(s)	1853
HincII	GTYRAC	2 cut(s)	787, 976
HindII	GTYRAC	2 cut(s)	787, 976
HinfI	GANTC	9 cut(s)	157, 239, 569, 877, 916, 1161, 1516, 1919, 1955
HpaII	CCGG	9 cut(s)	810, 999, 1254, 1544, 1782, 1836, 1895, 2106, 2125
HphI	GGTGA	8 cut(s)	47, 91, 1065, 1160, 1244, 1455, 1960, 1978
Hpy166II	GTNNAC	6 cut(s)	205, 227, 787, 976, 1251, 2014
Hpy188III	TCNNGA	8 cut(s)	161, 173, 179, 948, 1202, 1277, 1412, 1425
Hpy8I	GTNNAC	6 cut(s)	205, 227, 787, 976, 1251, 2014
Hpy99I	CGWCG	3 cut(s)	67, 724, 977
HpyCH4III	ACNGT	2 cut(s)	428, 1232
HpyCH4IV	ACGT	3 cut(s)	62, 972, 2074
HpyCH4V	TGCA	7 cut(s)	227, 271, 431, 436, 475, 1699, 1732
HpyF3I	CTNAG	7 cut(s)	402, 714, 1077, 1599, 1829, 1890, 1962
HpySE526I	ACGT	3 cut(s)	62, 972, 2074
Hsp92I	GRCGYC	3 cut(s)	62, 719, 972
HspAI	GCGC	1 cut(s)	1853
Ksp22I	TGATCA	4 cut(s)	169, 1408, 1564, 1690
LguI	GCTCTTC	1 cut(s)	669
LmnI	GCTCC	6 cut(s)	46, 268, 472, 623, 649, 1179
Lsp1109I	GCAGC	6 cut(s)	628, 1311, 1314, 1760, 1984, 2086
LweI	GCATC	2 cut(s)	250, 454
MaeII	ACGT	3 cut(s)	62, 972, 2074
MaeIII	GTNAC	6 cut(s)	1123, 1162, 1232, 1435, 1714, 1948
MbiI	CCGCTC	1 cut(s)	320
MfeI	CAATTG	1 cut(s)	1353
MflI	RGATCY	5 cut(s)	175, 389, 610, 1063, 1619
MhlI	GDGCHC	2 cut(s)	51, 229
MlyI	GAGTC	9 cut(s)	151, 233, 563, 871, 910, 1170, 1510, 1913, 1964
MmeI	TCCRAC	2 cut(s)	526, 671
MseI	TTAA	3 cut(s)	249, 666, 1902
MslI	CAYNNNNRTG	6 cut(s)	24, 135, 510, 960, 1169, 1727
MspA1I	CMGCKG	1 cut(s)	1751
MspCI	CTTAAG	1 cut(s)	665
MspI	CCGG	9 cut(s)	810, 999, 1254, 1544, 1782, 1836, 1895, 2106, 2125
MspR9I	CCNGG	9 cut(s)	579, 792, 811, 1004, 1027, 1295, 1836, 1896, 2107
MunI	CAATTG	1 cut(s)	1353
Mva1269I	GAATGC	1 cut(s)	483
MvaI	CCWGG	5 cut(s)	579, 792, 1004, 1027, 1295
MvnI	CGCG	1 cut(s)	449
NciI	CCSGG	4 cut(s)	811, 1836, 1896, 2107
NcoI	CCATGG	2 cut(s)	220, 966
NdeI	CATATG	1 cut(s)	1324
NlaIV	GGNNCC	2 cut(s)	291, 1534
NmeAIII	GCCGAG	1 cut(s)	221
NmuCI	GTSAC	4 cut(s)	1123, 1162, 1232, 1948
OliI	CACNNNNGTG	2 cut(s)	960, 1727
PaeR7I	CTCGAG	1 cut(s)	1423
PagI	TCATGA	1 cut(s)	1411
PciSI	GCTCTTC	1 cut(s)	669
PctI	GAATGC	1 cut(s)	483
PflFI	GACNNNGTC	2 cut(s)	1550, 1954
PflMI	CCANNNNNTGG	1 cut(s)	653
PkrI	GCNGC	7 cut(s)	643, 1301, 1304, 1360, 1750, 1974, 2101
PleI	GAGTC	9 cut(s)	151, 233, 563, 871, 910, 1169, 1510, 1913, 1963
PpsI	GAGTC	9 cut(s)	151, 233, 563, 871, 910, 1169, 1510, 1913, 1963
PpuMI	RGGWCCY	1 cut(s)	710
PshAI	GACNNNNGTC	3 cut(s)	803, 839, 1121
PsiI	TTATAA	1 cut(s)	1868
Psp5II	RGGWCCY	1 cut(s)	710
Psp6I	CCWGG	5 cut(s)	577, 790, 1002, 1025, 1293
PspFI	CCCAGC	2 cut(s)	1445, 1672
PspGI	CCWGG	5 cut(s)	577, 790, 1002, 1025, 1293
PspN4I	GGNNCC	2 cut(s)	291, 1534
PspPI	GGNCC	6 cut(s)	630, 656, 710, 1039, 1833, 1935
PspPPI	RGGWCCY	1 cut(s)	710
PsuI	RGATCY	5 cut(s)	175, 389, 610, 1063, 1619
PsyI	GACNNNGTC	2 cut(s)	1550, 1954
RsaI	GTAC	7 cut(s)	18, 775, 903, 934, 1479, 2053, 2133
RsaNI	GTAC	7 cut(s)	17, 774, 902, 933, 1478, 2052, 2132
RseI	CAYNNNNRTG	6 cut(s)	24, 135, 510, 960, 1169, 1727
SalI	GTCGAC	1 cut(s)	974
SapI	GCTCTTC	1 cut(s)	669
SaqAI	TTAA	3 cut(s)	249, 666, 1902
SatI	GCNGC	7 cut(s)	642, 1300, 1303, 1359, 1749, 1973, 2100
Sau96I	GGNCC	6 cut(s)	630, 656, 710, 1039, 1833, 1935
ScaI	AGTACT	1 cut(s)	1479
SchI	GAGTC	9 cut(s)	151, 233, 563, 871, 910, 1170, 1510, 1913, 1964
ScrFI	CCNGG	9 cut(s)	579, 792, 811, 1004, 1027, 1295, 1836, 1896, 2107
SduI	GDGCHC	2 cut(s)	51, 229
SfaNI	GCATC	2 cut(s)	250, 454
SfcI	CTRYAG	4 cut(s)	342, 417, 519, 597
Sfr274I	CTCGAG	1 cut(s)	1423
SinI	GGWCC	4 cut(s)	630, 656, 710, 1039
SlaI	CTCGAG	1 cut(s)	1423
SmiMI	CAYNNNNRTG	6 cut(s)	24, 135, 510, 960, 1169, 1727
SmlI	CTYRAG	4 cut(s)	665, 1055, 1089, 1423
SmoI	CTYRAG	4 cut(s)	665, 1055, 1089, 1423
SpeI	ACTAGT	1 cut(s)	770
SsiI	CCGC	9 cut(s)	320, 447, 1050, 1358, 1395, 1587, 1616, 1647, 1751
StyD4I	CCNGG	9 cut(s)	577, 790, 809, 1002, 1025, 1293, 1834, 1894, 2105
StyI	CCWWGG	5 cut(s)	220, 350, 966, 980, 1938
TaaI	ACNGT	2 cut(s)	428, 1232
TaiI	ACGT	3 cut(s)	65, 975, 2077
TaqI	TCGA	5 cut(s)	589, 975, 1185, 1289, 1424
TaqII	GACCGA	2 cut(s)	1056, 1133
TatI	WGTACW	3 cut(s)	16, 901, 1477
TauI	GCSGC	1 cut(s)	1361
Tru1I	TTAA	3 cut(s)	249, 666, 1902
Tru9I	TTAA	3 cut(s)	249, 666, 1902
TscAI	CASTG	5 cut(s)	382, 784, 1132, 1315, 1603
TseFI	GTSAC	4 cut(s)	1123, 1162, 1232, 1948
TseI	GCWGC	6 cut(s)	641, 1299, 1302, 1748, 1972, 2099
Tsp45I	GTSAC	4 cut(s)	1123, 1162, 1232, 1948
TspGWI	ACGGA	1 cut(s)	1967
TspRI	CASTG	5 cut(s)	382, 784, 1132, 1315, 1603
Tth111I	GACNNNGTC	2 cut(s)	1550, 1954
Van91I	CCANNNNNTGG	1 cut(s)	653
Vha464I	CTTAAG	1 cut(s)	665
VneI	GTGCAC	1 cut(s)	225
VpaK11BI	GGWCC	4 cut(s)	630, 656, 710, 1039
XagI	CCTNNNNNAGG	2 cut(s)	270, 474
XapI	RAATTY	3 cut(s)	301, 358, 2002
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1033
XhoI	CTCGAG	1 cut(s)	1423
XmaJI	CCTAGG	1 cut(s)	980
XmiI	GTMKAC	3 cut(s)	204, 975, 1250
ZraI	GACGTC	2 cut(s)	63, 973
ZrmI	AGTACT	1 cut(s)	1479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.