Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0002096

Physical Location & Seq

Genomic Coordinates Forward (+)

64666886 .. 64670876

Gene Structure 3991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G036860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGTATTCGCATCTAACAGACCATAAAGGTGAAGATGAAGACCACCATGAGAAGAAGTCGGTTTTGAAGAAGGTGAAGGCGAAAGCGAGGAAGTTAAAGGAGACTATCACAGGGCATGGCCATCACGGCCATGAACACGAAGGCCATCATACTCCTGATGATCATGATCTGGATGAGGAAGATGACGAAGAGGTAGACGACCCAGAAGTTCATGGTGCACCGACGACTAGGAGGACTGATGCTCCTGTGCAAGGAGGCATTCATTTTGGAGACACACACCATGAATATGATCCTGTAGTGCCAAGAGAGAGGACTAATGTGGGATTTAGTGGACCGGTGAGGGATTTTGTGCCTGGGCAAAATCGAACTACAACAGGGCATGAGGATCTTTTGGGAGGAGCAAGGACAAAACTGGCTGGTCCAACAACTGGACCTGCCCTTAAGCATGAAGAGCCAAAGGGATTGGTTGATGTAATTGGGGGAGGTCCTCATGCGCCGCACAACACCCCTGTTTCTCCTCTTCCTCATCATGGAAATTACAACACTCTTACCATGGATGTTGACCCAGGTAAGACTTTTGGCTCCGGGCAAAGAGGGCTTTTAGGTCAGACCAGGGTCAAATTGGAGAAGACTGATGTATTAGGGGAAGGAACTCCTGTGCTACAGAGTACCCCGGTTTCTTCTCTTGCTCATGGAACTCACAGAAGTACAATGGACGTCTACCCAAGGCAGACATCCAGGCAGGGAGGGCATTTAGGTCAGTCCAGGGTCAATTTGGACCGACCCAGAGGACTTGAGGAAGACCCTCATGCGCCTAAAGCCAATCCTCAAGCTTACACTCCTTCAAATTACGAGACCAAAGTCACTGATCCCACCAAATCTGGTGGTCAGGAAATTGGAGTCACACCAATACTTCATTCCTTCGATAAGATGAACCTCCACGGTGATGATCACCAATACTTGAAAATGGGCAGCAGCTACACTGAAAAAATCTCATATGCCACTTCAGCCATTTCCGACAAAGCAATTTCGGCAAAGAATGTAGTTGCTTCCAAGTTGGGGTATGGCGGAAACGAGCCTGATCATGATGACTACTCGAGAGGCTATGTTACTGGTGCTGGGAAGTCTGGTTCATCACCTCGGAACAAAGTACTTGATCCCTCTACTAACCAATTCAGATCAGCAGAGACTCCACAAGTCCGAGGAACCATCAAACCGGACCATGACACCACAACTGATCAAAAGCCAGTCCACAAAGGCGGAAGCTACACTGAGAAGATTTCATCTGCCGGATCTGCCATTGCTGACAAGGCGATATCCGCAAAGAATGTTGTTGCGTCCAAGCTGGGATATGGGGCAAGAGATCAGGTGCATGACAGGGAAGATGTAACTCGCACTAACGTGCAGTCTGGGACAACAGCAGCGGATCAACATGGCAAGACGATTTCCTCTACAGTTGCGGAGAAGCTAACACCTGTGTATGAGAAGGTTGCCGGGGCAGGGACTTCTGTGATGTCCAAGGTTCAAGGTGGGAGTACTATTAGTGTCGGCAGGGACACTAGTGCCGGGGTTGTTAATCAAGCCGGACAGGACAAAGGGGTGTCTGTGAAGGACTATTTTTCAGAGAAGCTGAGGCCCGGAGAGGAGGACAAAGCGCTTTCGGAGGTTATAAGTGAGACATTACACAAGCATAAGCCGGGTGTTAAGCAAGAGAAGACAGTGTACTTTGCTAGTTCTAGGCCCAAGGGGAAGATCAATTTTGTGGTGGACAAGATTAAGGATACTGTTGGTTCGATGCTTGGTGGTACTAATGAGAGTGATGGAGAACGACGTAGGCAAGGTCTCTCTAGCTCTGCTGCTACCGGGGAGGAAGATCAGCACCGGAGGGTACAGGTATCCGGCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008150 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009611 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009743 GO:0009755 GO:0009987 GO:0010033 GO:0010035 GO:0010150 GO:0010555 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042538 GO:0043207 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048511 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:1901700 GO:1901701 GO:1902074 GO:2000026 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAP160

Protein Analysis

635

Amino Acids

68.24

Weight (kDa)

6.62

Isoelectric Point (pI)

29.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LTI65_LTI78_N	PF23403	14 - 76	5.5e-24	LTI65/LTI78 CAP160 N-terminal
LTI65_LTI78_NYQTKV	PF23402	256 - 315	2.5e-32	LTI65/LTI78 NYQTKV repeat
CAP160	PF07918	331 - 357	7.4e-14	CAP160 repeat
CAP160	PF07918	427 - 452	1.3e-13	CAP160 repeat
LTI65_PGEED	PF23399	531 - 561	6.4e-19	LTI65/LTI78 PGEED repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25580 AT4G25580 AT5G52300 AT5G52300 AT5G52310
fragaria_vesca	FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29491
malus_domestica	MD01G1201000.v1.1 MD07G1268800.v1.1
prunus_persica	Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1
pyrus_communis	pycom07g24640
rosa_chinensis	RchiOBHm_Chr1g0377291 RchiOBHm_Chr1g0377331
rosa_laevigata	RLG00000026530
rosa_multiflora	Rmu_co8507117.1_g000001 Rmu_sc0001944.1_g000005 Rmu_sc0017163.1_g000001 Rmu_sc0022060.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281320 Rroxscaffold_4G00281330
rosa_rugosa	Rorug01G0402700
rosa_samantha	Rh1AG420000 Rh1AG420500 Rh1BG379000 Rh1BG379100 Rh1BG379200 Rh1BG379300 Rh1CG393000 Rh1CG393100 Rh1CG393200 Rh1CG393300 Rh1DG409600 Rh1DG409700 Rh1DG409800 Rh1DG410300
rosa_wichuraiana	Rw1G036860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1670
AatII	GACGTC	1 cut(s)	720
Acc36I	ACCTGC	1 cut(s)	442
AccB7I	CCANNNNNTGG	1 cut(s)	428
AccI	GTMKAC	2 cut(s)	195, 720
AciI	CCGC	6 cut(s)	497, 1068, 1260, 1320, 1424, 1460
AclWI	GGATC	6 cut(s)	284, 393, 863, 1151, 1300, 1434
AcoI	YGGCCR	2 cut(s)	118, 127
AcuI	CTGAAG	1 cut(s)	990
AcyI	GRCGYC	1 cut(s)	717
AfaI	GTAC	7 cut(s)	670, 709, 1152, 1537, 1724, 1807, 1890
AfeI	AGCGCT	1 cut(s)	1656
AfiI	CCNNNNNNNGG	5 cut(s)	251, 428, 530, 1059, 1500
AflII	CTTAAG	1 cut(s)	440
AgeI	ACCGGT	1 cut(s)	334
AgsI	TTSAA	4 cut(s)	67, 846, 964, 1526
AhlI	ACTAGT	1 cut(s)	1559
AjnI	CCWGG	5 cut(s)	352, 565, 611, 737, 764
AjuI	GAANNNNNNNTTGG	2 cut(s)	901, 933
AleI	CACNNNNGTG	1 cut(s)	1400
AloI	GAACNNNNNNTCC	2 cut(s)	1114, 1146
AluBI	AGCT	7 cut(s)	833, 978, 1266, 1345, 1468, 1630, 1851
AluI	AGCT	7 cut(s)	833, 978, 1266, 1345, 1468, 1630, 1851
Alw21I	GWGCWC	1 cut(s)	220
Alw26I	GTCTC	6 cut(s)	95, 264, 848, 1181, 1670, 1847
Alw44I	GTGCAC	1 cut(s)	216
AlwI	GGATC	6 cut(s)	284, 393, 863, 1151, 1300, 1434
Ama87I	CYCGRG	1 cut(s)	1096
Aor51HI	AGCGCT	1 cut(s)	1656
AoxI	GGCC	5 cut(s)	118, 127, 142, 1634, 1739
ApaLI	GTGCAC	1 cut(s)	216
ApeKI	GCWGC	4 cut(s)	972, 975, 1421, 1856
AsiGI	ACCGGT	1 cut(s)	334
AspLEI	GCGC	3 cut(s)	496, 814, 1657
AspS9I	GGNCC	8 cut(s)	332, 419, 431, 485, 778, 1219, 1635, 1740
AsuC2I	CCSGG	7 cut(s)	586, 674, 1495, 1567, 1638, 1698, 1864
AsuHPI	GGTGA	6 cut(s)	41, 85, 349, 944, 956, 1128
AvaI	CYCGRG	1 cut(s)	1096
AvaII	GGWCC	6 cut(s)	332, 419, 431, 485, 778, 1219
BaeGI	GKGCMC	1 cut(s)	220
BalI	TGGCCA	1 cut(s)	120
BarI	GAAGNNNNNNTAC	2 cut(s)	1706, 1738
BbsI	GAAGAC	4 cut(s)	45, 635, 807, 1721
Bbv12I	GWGCWC	1 cut(s)	220
BbvCI	CCTCAGC	1 cut(s)	1631
BbvI	GCAGC	4 cut(s)	984, 987, 1433, 1843
BccI	CCATC	4 cut(s)	129, 153, 1217, 1814
BceAI	ACGGC	1 cut(s)	142
BciT130I	CCWGG	5 cut(s)	354, 567, 613, 739, 766
BciVI	GTATCC	2 cut(s)	1774, 1906
BclI	TGATCA	4 cut(s)	160, 949, 1081, 1237
BcnI	CCSGG	7 cut(s)	586, 674, 1495, 1567, 1638, 1698, 1864
BcoDI	GTCTC	6 cut(s)	95, 264, 848, 1181, 1670, 1847
BcuI	ACTAGT	1 cut(s)	1559
BfaI	CTAG	5 cut(s)	228, 1560, 1731, 1737, 1848
BfmI	CTRYAG	3 cut(s)	294, 662, 1452
BfoI	RGCGCY	1 cut(s)	1658
BfrI	CTTAAG	1 cut(s)	440
BfuAI	ACCTGC	1 cut(s)	442
BfuI	GTATCC	2 cut(s)	1774, 1906
BglI	GCCNNNNNGGC	1 cut(s)	126
BisI	GCNGC	5 cut(s)	497, 973, 976, 1422, 1857
BlsI	GCNGC	5 cut(s)	498, 974, 977, 1423, 1858
BmcAI	AGTACT	2 cut(s)	1152, 1537
Bme18I	GGWCC	6 cut(s)	332, 419, 431, 485, 778, 1219
BmeT110I	CYCGRG	1 cut(s)	1096
BmgT120I	GGNCC	8 cut(s)	332, 419, 431, 485, 778, 1219, 1635, 1740
BmiI	GGNNCC	2 cut(s)	583, 1207
BmsI	GCATC	3 cut(s)	19, 229, 1785
BoxI	GACNNNNGTC	2 cut(s)	614, 860
BpiI	GAAGAC	4 cut(s)	45, 635, 807, 1721
Bpu10I	CCTNAGC	1 cut(s)	1631
BpuEI	CTTGAG	2 cut(s)	813, 815
BpuMI	CCSGG	7 cut(s)	586, 674, 1495, 1567, 1638, 1698, 1864
BsaBI	GATNNNNATC	1 cut(s)	165
BsaHI	GRCGYC	1 cut(s)	717
BsaI	GGTCTC	2 cut(s)	848, 1847
BsaWI	WCCGGW	3 cut(s)	334, 1216, 1881
BsaXI	ACNNNNNCTCC	2 cut(s)	226, 256
Bsc4I	CCNNNNNNNGG	5 cut(s)	251, 428, 530, 1059, 1500
Bse118I	RCCGGY	1 cut(s)	334
Bse1I	ACTGG	4 cut(s)	417, 433, 1117, 1247
Bse3DI	GCAATG	1 cut(s)	1299
Bse8I	GATNNNNATC	1 cut(s)	165
BseBI	CCWGG	5 cut(s)	354, 567, 613, 739, 766
BseGI	GGATG	3 cut(s)	178, 562, 734
BseJI	GATNNNNATC	1 cut(s)	165
BseLI	CCNNNNNNNGG	5 cut(s)	251, 428, 530, 1059, 1500
BseMI	GCAATG	1 cut(s)	1299
BseMII	CTCAG	2 cut(s)	1263, 1622
BseNI	ACTGG	4 cut(s)	417, 433, 1117, 1247
BseRI	GAGGAG	3 cut(s)	411, 507, 1658
BseSI	GKGCMC	1 cut(s)	220
BseXI	GCAGC	4 cut(s)	984, 987, 1433, 1843
BseYI	CCCAGC	2 cut(s)	1118, 1345
BsgI	GTGCAG	1 cut(s)	1424
BshFI	GGCC	5 cut(s)	120, 129, 144, 1636, 1741
BshTI	ACCGGT	1 cut(s)	334
BsiHKAI	GWGCWC	1 cut(s)	220
BsiHKCI	CYCGRG	1 cut(s)	1096
BslFI	GGGAC	3 cut(s)	1426, 1516, 1568
BslI	CCNNNNNNNGG	5 cut(s)	251, 428, 530, 1059, 1500
BsmAI	GTCTC	6 cut(s)	95, 264, 848, 1181, 1670, 1847
BsmFI	GGGAC	3 cut(s)	1426, 1516, 1568
BsmI	GAATGC	1 cut(s)	258
BsnI	GGCC	5 cut(s)	120, 129, 144, 1636, 1741
Bso31I	GGTCTC	2 cut(s)	848, 1847
BsoBI	CYCGRG	1 cut(s)	1096
Bsp1286I	GDGCHC	1 cut(s)	220
Bsp19I	CCATGG	1 cut(s)	552
BspACI	CCGC	6 cut(s)	497, 1068, 1260, 1320, 1424, 1460
BspANI	GGCC	5 cut(s)	120, 129, 144, 1636, 1741
BspCNI	CTCAG	2 cut(s)	1264, 1623
BspHI	TCATGA	2 cut(s)	163, 1084
BspLI	GGNNCC	2 cut(s)	583, 1207
BspMI	ACCTGC	1 cut(s)	442
BspPI	GGATC	6 cut(s)	284, 393, 863, 1151, 1300, 1434
BspQI	GCTCTTC	1 cut(s)	444
BspTI	CTTAAG	1 cut(s)	440
BspTNI	GGTCTC	2 cut(s)	848, 1847
BsrDI	GCAATG	1 cut(s)	1299
BsrFI	RCCGGY	1 cut(s)	334
BsrI	ACTGG	4 cut(s)	417, 433, 1117, 1247
BssAI	RCCGGY	1 cut(s)	334
BssNI	GRCGYC	1 cut(s)	717
BssT1I	CCWWGG	4 cut(s)	552, 725, 1518, 1743
Bst2UI	CCWGG	5 cut(s)	354, 567, 613, 739, 766
Bst4CI	ACNGT	4 cut(s)	944, 1456, 1720, 1786
Bst6I	CTCTTC	3 cut(s)	183, 444, 525
BstACI	GRCGYC	1 cut(s)	717
BstAFI	CTTAAG	1 cut(s)	440
BstDEI	CTNAG	2 cut(s)	1272, 1631
BstDSI	CCRYGG	2 cut(s)	552, 940
BstENI	CCTNNNNNAGG	1 cut(s)	249
BstF5I	GGATG	3 cut(s)	178, 562, 734
BstH2I	RGCGCY	1 cut(s)	1658
BstHHI	GCGC	3 cut(s)	496, 814, 1657
BstMAI	GTCTC	6 cut(s)	95, 264, 848, 1181, 1670, 1847
BstNI	CCWGG	5 cut(s)	354, 567, 613, 739, 766
BstPAI	GACNNNNGTC	2 cut(s)	614, 860
BstSFI	CTRYAG	3 cut(s)	294, 662, 1452
BstSLI	GKGCMC	1 cut(s)	220
BstV1I	GCAGC	4 cut(s)	984, 987, 1433, 1843
BstV2I	GAAGAC	4 cut(s)	45, 635, 807, 1721
BstX2I	RGATCY	2 cut(s)	385, 1292
BstYI	RGATCY	2 cut(s)	385, 1292
BsuI	GTATCC	2 cut(s)	1774, 1906
BsuRI	GGCC	5 cut(s)	120, 129, 144, 1636, 1741
BtgI	CCRYGG	2 cut(s)	552, 940
BtsCI	GGATG	3 cut(s)	178, 562, 734
BtsIMutI	CAGTG	4 cut(s)	864, 981, 1269, 1725
BveI	ACCTGC	1 cut(s)	442
CciI	TCATGA	2 cut(s)	163, 1084
CfoI	GCGC	3 cut(s)	496, 814, 1657
Cfr10I	RCCGGY	1 cut(s)	334
Cfr13I	GGNCC	8 cut(s)	332, 419, 431, 485, 778, 1219, 1635, 1740
CseI	GACGC	1 cut(s)	1326
Csp6I	GTAC	7 cut(s)	669, 708, 1151, 1536, 1723, 1806, 1889
CspAI	ACCGGT	1 cut(s)	334
CspCI	CAANNNNNGTGG	2 cut(s)	865, 900
CviQI	GTAC	7 cut(s)	669, 708, 1151, 1536, 1723, 1806, 1889
DdeI	CTNAG	2 cut(s)	1272, 1631
EaeI	YGGCCR	2 cut(s)	118, 127
Eam1104I	CTCTTC	3 cut(s)	183, 444, 525
EarI	CTCTTC	3 cut(s)	183, 444, 525
EciI	GGCGGA	2 cut(s)	1083, 1275
Eco130I	CCWWGG	4 cut(s)	552, 725, 1518, 1743
Eco31I	GGTCTC	2 cut(s)	848, 1847
Eco32I	GATATC	1 cut(s)	1317
Eco47I	GGWCC	6 cut(s)	332, 419, 431, 485, 778, 1219
Eco47III	AGCGCT	1 cut(s)	1656
Eco57I	CTGAAG	1 cut(s)	990
Eco88I	CYCGRG	1 cut(s)	1096
EcoNI	CCTNNNNNAGG	1 cut(s)	249
EcoO109I	RGGNCCY	1 cut(s)	485
EcoRII	CCWGG	5 cut(s)	352, 565, 611, 737, 764
EcoRV	GATATC	1 cut(s)	1317
EcoT14I	CCWWGG	4 cut(s)	552, 725, 1518, 1743
ErhI	CCWWGG	4 cut(s)	552, 725, 1518, 1743
FaqI	GGGAC	3 cut(s)	1426, 1516, 1568
FauNDI	CATATG	1 cut(s)	997
FbaI	TGATCA	4 cut(s)	160, 949, 1081, 1237
FblI	GTMKAC	2 cut(s)	195, 720
Fnu4HI	GCNGC	5 cut(s)	497, 973, 976, 1422, 1857
FokI	GGATG	3 cut(s)	185, 569, 721
Fsp4HI	GCNGC	5 cut(s)	497, 973, 976, 1422, 1857
FspBI	CTAG	5 cut(s)	228, 1560, 1731, 1737, 1848
GlaI	GCGC	3 cut(s)	495, 813, 1656
GluI	GCNGC	5 cut(s)	497, 973, 976, 1422, 1857
GsaI	CCCAGC	2 cut(s)	1122, 1349
HaeII	RGCGCY	1 cut(s)	1658
HaeIII	GGCC	5 cut(s)	120, 129, 144, 1636, 1741
HgaI	GACGC	1 cut(s)	1326
HhaI	GCGC	3 cut(s)	496, 814, 1657
Hin1I	GRCGYC	1 cut(s)	717
Hin6I	GCGC	3 cut(s)	494, 812, 1655
HinP1I	GCGC	3 cut(s)	494, 812, 1655
HincII	GTYRAC	1 cut(s)	562
HindII	GTYRAC	1 cut(s)	562
HindIII	AAGCTT	1 cut(s)	831
HinfI	GANTC	2 cut(s)	900, 1189
HphI	GGTGA	6 cut(s)	41, 85, 349, 944, 956, 1128
Hpy166II	GTNNAC	8 cut(s)	196, 218, 332, 562, 721, 1252, 1723, 1768
Hpy188I	TCNGA	7 cut(s)	609, 1018, 1143, 1178, 1202, 1624, 1663
Hpy188III	TCNNGA	6 cut(s)	155, 164, 170, 890, 1085, 1098
Hpy8I	GTNNAC	8 cut(s)	196, 218, 332, 562, 721, 1252, 1723, 1768
Hpy99I	CGWCG	2 cut(s)	226, 1833
HpyAV	CCTTC	8 cut(s)	64, 70, 134, 641, 852, 931, 1480, 1603
HpyCH4III	ACNGT	4 cut(s)	944, 1456, 1720, 1786
HpyCH4IV	ACGT	3 cut(s)	717, 1401, 1831
HpyCH4V	TGCA	4 cut(s)	218, 250, 1372, 1405
HpyF3I	CTNAG	2 cut(s)	1272, 1631
HpySE526I	ACGT	3 cut(s)	717, 1401, 1831
Hsp92I	GRCGYC	1 cut(s)	717
HspAI	GCGC	3 cut(s)	494, 812, 1655
Ksp22I	TGATCA	4 cut(s)	160, 949, 1081, 1237
LguI	GCTCTTC	1 cut(s)	444
LmnI	GCTCC	3 cut(s)	247, 398, 587
Lsp1109I	GCAGC	4 cut(s)	984, 987, 1433, 1843
LweI	GCATC	3 cut(s)	19, 229, 1785
MaeI	CTAG	5 cut(s)	228, 1560, 1731, 1737, 1848
MaeII	ACGT	3 cut(s)	717, 1401, 1831
MaeIII	GTNAC	4 cut(s)	862, 901, 1108, 1387
MflI	RGATCY	2 cut(s)	385, 1292
MhlI	GDGCHC	1 cut(s)	220
MlsI	TGGCCA	1 cut(s)	120
MluCI	AATT	9 cut(s)	474, 535, 620, 772, 847, 894, 1026, 1172, 1756
MluNI	TGGCCA	1 cut(s)	120
MlyI	GAGTC	2 cut(s)	909, 1183
MmeI	TCCRAC	2 cut(s)	446, 1041
Mox20I	TGGCCA	1 cut(s)	120
MscI	TGGCCA	1 cut(s)	120
MseI	TTAA	5 cut(s)	95, 441, 1575, 1704, 1776
MslI	CAYNNNNRTG	5 cut(s)	27, 129, 285, 945, 1400
Msp20I	TGGCCA	1 cut(s)	120
MspA1I	CMGCKG	1 cut(s)	1424
MspCI	CTTAAG	1 cut(s)	440
Mva1269I	GAATGC	1 cut(s)	258
MvaI	CCWGG	5 cut(s)	354, 567, 613, 739, 766
NciI	CCSGG	7 cut(s)	586, 674, 1495, 1567, 1638, 1698, 1864
NcoI	CCATGG	1 cut(s)	552
NdeI	CATATG	1 cut(s)	997
NlaIV	GGNNCC	2 cut(s)	583, 1207
NmuCI	GTSAC	2 cut(s)	862, 901
OliI	CACNNNNGTG	1 cut(s)	1400
PaeR7I	CTCGAG	1 cut(s)	1096
PagI	TCATGA	2 cut(s)	163, 1084
PciSI	GCTCTTC	1 cut(s)	444
PctI	GAATGC	1 cut(s)	258
PflMI	CCANNNNNTGG	1 cut(s)	428
PinAI	ACCGGT	1 cut(s)	334
PkrI	GCNGC	5 cut(s)	498, 974, 977, 1423, 1858
PleI	GAGTC	2 cut(s)	908, 1183
PpsI	GAGTC	2 cut(s)	908, 1183
PpuMI	RGGWCCY	1 cut(s)	485
PshAI	GACNNNNGTC	2 cut(s)	614, 860
PsiI	TTATAA	1 cut(s)	1670
Psp5II	RGGWCCY	1 cut(s)	485
Psp6I	CCWGG	5 cut(s)	352, 565, 611, 737, 764
PspFI	CCCAGC	2 cut(s)	1118, 1345
PspGI	CCWGG	5 cut(s)	352, 565, 611, 737, 764
PspN4I	GGNNCC	2 cut(s)	583, 1207
PspPI	GGNCC	8 cut(s)	332, 419, 431, 485, 778, 1219, 1635, 1740
PspPPI	RGGWCCY	1 cut(s)	485
PsuI	RGATCY	2 cut(s)	385, 1292
RsaI	GTAC	7 cut(s)	670, 709, 1152, 1537, 1724, 1807, 1890
RsaNI	GTAC	7 cut(s)	669, 708, 1151, 1536, 1723, 1806, 1889
RseI	CAYNNNNRTG	5 cut(s)	27, 129, 285, 945, 1400
SapI	GCTCTTC	1 cut(s)	444
SaqAI	TTAA	5 cut(s)	95, 441, 1575, 1704, 1776
SatI	GCNGC	5 cut(s)	497, 973, 976, 1422, 1857
Sau96I	GGNCC	8 cut(s)	332, 419, 431, 485, 778, 1219, 1635, 1740
ScaI	AGTACT	2 cut(s)	1152, 1537
SchI	GAGTC	2 cut(s)	909, 1183
SduI	GDGCHC	1 cut(s)	220
SfaNI	GCATC	3 cut(s)	19, 229, 1785
SfcI	CTRYAG	3 cut(s)	294, 662, 1452
SfiI	GGCCNNNNNGGCC	1 cut(s)	126
Sfr274I	CTCGAG	1 cut(s)	1096
SinI	GGWCC	6 cut(s)	332, 419, 431, 485, 778, 1219
SlaI	CTCGAG	1 cut(s)	1096
SmiMI	CAYNNNNRTG	5 cut(s)	27, 129, 285, 945, 1400
SmlI	CTYRAG	4 cut(s)	440, 794, 828, 1096
SmoI	CTYRAG	4 cut(s)	440, 794, 828, 1096
SpeI	ACTAGT	1 cut(s)	1559
Sse9I	AATT	9 cut(s)	474, 535, 620, 772, 847, 894, 1026, 1172, 1756
SsiI	CCGC	6 cut(s)	497, 1068, 1260, 1320, 1424, 1460
SspMI	CTAG	5 cut(s)	228, 1560, 1731, 1737, 1848
StyI	CCWWGG	4 cut(s)	552, 725, 1518, 1743
TaaI	ACNGT	4 cut(s)	944, 1456, 1720, 1786
TaiI	ACGT	3 cut(s)	720, 1404, 1834
TaqI	TCGA	4 cut(s)	364, 924, 1097, 1793
TaqII	GACCGA	1 cut(s)	795
TasI	AATT	9 cut(s)	474, 535, 620, 772, 847, 894, 1026, 1172, 1756
TatI	WGTACW	4 cut(s)	707, 1150, 1535, 1722
TauI	GCSGC	1 cut(s)	499
Tru1I	TTAA	5 cut(s)	95, 441, 1575, 1704, 1776
Tru9I	TTAA	5 cut(s)	95, 441, 1575, 1704, 1776
TscAI	CASTG	4 cut(s)	871, 988, 1276, 1725
TseFI	GTSAC	2 cut(s)	862, 901
TseI	GCWGC	4 cut(s)	972, 975, 1421, 1856
Tsp45I	GTSAC	2 cut(s)	862, 901
TspRI	CASTG	4 cut(s)	871, 988, 1276, 1725
Van91I	CCANNNNNTGG	1 cut(s)	428
Vha464I	CTTAAG	1 cut(s)	440
VneI	GTGCAC	1 cut(s)	216
VpaK11BI	GGWCC	6 cut(s)	332, 419, 431, 485, 778, 1219
XagI	CCTNNNNNAGG	1 cut(s)	249
XcmI	CCANNNNNNNNNTGG	2 cut(s)	619, 772
XhoI	CTCGAG	1 cut(s)	1096
XmiI	GTMKAC	2 cut(s)	195, 720
XspI	CTAG	5 cut(s)	228, 1560, 1731, 1737, 1848
ZraI	GACGTC	1 cut(s)	718
ZrmI	AGTACT	2 cut(s)	1152, 1537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.