Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0004014

Physical Location & Seq

Genomic Coordinates Reverse (-)

8554790 .. 8563560

Gene Structure 8771 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1112600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGGAAGCCGAAGCTCAAGAATCCAATCCCCAAAATGACGCCGTCATCAACTCCTTCTGCGAGATCACCTCCGCCTCCAAGCAAGAAGCTCTCTTCTTCCTTGAATCCCACAACTGGGACCTCGACTCCGCCGTTTCCACGTTTTTGGACAACAGCGCCGCCGTCCCAGCCGCCGACGAGGCCACACACGCCGCCCCGCGCTCAATCCCCGTCTCCCACTCTCTCTCTCCCTCACCCTCGCACTCCCCCAGTTACTCTCCTTCGCAGTCCCCGCCGCGCTCTCGCTCGCCGTCGCCCGTGTCTCGGGCGCCCTACCAGCTCCGATCGAAGCGCGCCGCCTCTAGTGGAGCCGACAGAAAGGGCGATGCCAAGCCGCCGTCTGCGAGTCGTCCGCGTGGCATACGCACGCTTTCCGATCTGAATCGGCCGGCGAACGGCGGGTCCGATAGTGACTCCGATGAACCCCAGGAGTACTACACTGGTGGCGAGAAAAGTGGAATGCTTGTCCAAGACCCTACCAAAGGCAGTGATGTGGATTCAATATTCAGTCAAGCTAGGCAGCTGGCAGCCGCACAAGGACCTTTAGATGTCAATCAGCCTTCTTCAAGCTCAAAAAGTTTCAGTGGAACAGCTAGACTGCTTTCAGGGGAGACCGTTCCGACTGCTGCTCCTCAGCCACCTGAAACTATCGTTCACACTATCACTTTTTGGAGGAATGGGTTTTCTGTAGATGATGGTCCTTTGCGGAGGCTGGATGACCCCGAAAATGCACCCTTCCTGGAAAGCATCAAGAAGTCTGAGTGCCCAAAAGAGCTTGAACCAGGCAATAAGAGGACTTCTGTTCATGTTAATCTTATGAGGCGGGATGAAGAATATCCTGAACCAGTGAAGAGGCATGCTGTTTTTCAGGGTGTTGGAAGAACTTTAGGTGGCAGCAGCTCTGCCGCAGCTAGCACTGAGTCAACTGCTGCCGCTCCTCCCCTTAGAGGTGCTCCACTGCCTTTAGTGGGCTTAGTTGTGGATCAGTCATTGCCGTCAACCTCTGTTCAGCTAAGGTTAGCAGATGGTACGCGTATGGTATCTCGCTTCAACTACCACCATACAATCAGAGACATCCATGCTTTTATCGATGCCTCAAGGCCCGATGGGGCAAGAAGTTACCGACTGCAGACGATGGGGTTCCCTCCCAAACAGCTCACGGATCTGGACCAGACAATAGAGCAGGCCGGTATATCCAATTCCGTTATCATCCAAAAACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006511 GO:0006807 GO:0006914 GO:0006996 GO:0006997 GO:0006998 GO:0007030 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010256 GO:0010498 GO:0010921 GO:0016043 GO:0016236 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0019899 GO:0019941 GO:0022607 GO:0030163 GO:0030234 GO:0031323 GO:0031399 GO:0031468 GO:0032182 GO:0032268 GO:0035303 GO:0035304 GO:0043130 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0043666 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051117 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0051603 GO:0060255 GO:0061024 GO:0061025 GO:0061919 GO:0065007 GO:0065009 GO:0070925 GO:0071704 GO:0071840 GO:0080090 GO:0098772 GO:1901564 GO:1901565 GO:1901575 GO:1905037

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

SEP UBA_4 UBX

Protein Analysis

421

Amino Acids

45.06

Weight (kDa)

5.96

Isoelectric Point (pI)

65.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_4	PF14555	13 - 52	3e-14	UBA-like domain
UBA_8	PF22566	15 - 52	1.4e-07	UBA-like domain
SEP	PF08059	234 - 307	1.5e-26	SEP domain
UBX	PF00789	345 - 419	9.7e-17	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004014)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05040 AT1G05040
fragaria_vesca	FvH4_6g42560
malus_domestica	MD09G1112600.v1.1 MD17G1102700.v1.1
prunus_persica	Prupe.3G212000_v2.0.a1
pyrus_communis	pycom09g03700 pycom17g09710
rosa_chinensis	RchiOBHm_Chr2g0158411
rosa_multiflora	Rmu_sc0000469.1_g000016 Rmu_sc0000469.1_g000017 Rmu_sc0004269.1_g000002 Rmu_sc0004855.1_g000011 Rmu_sc0008144.1_g000009 Rmu_sc0018496.1_g000001 Rmu_ssc0000482.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091410 Rroxscaffold_2G00131060 Rroxscaffold_3G00232820 Rroxscaffold_5G00387420
rosa_rugosa	Rorug02G0468400
rosa_samantha	Rh2AG534600 Rh2BG548000 Rh2CG316000 Rh2CG349700 Rh2CG518400 Rh2DG557600 Rh4BG060900 Rh4CG066900
rosa_wichuraiana	Rw0G006730 Rw1G014520 Rw2G044270 Rw6G019090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	307
AccBSI	CCGCTC	1 cut(s)	974
AccII	CGCG	5 cut(s)	199, 277, 333, 394, 1072
AclWI	GGATC	2 cut(s)	1029, 1209
AcoI	YGGCCR	1 cut(s)	425
AcyI	GRCGYC	2 cut(s)	39, 308
AfaI	GTAC	2 cut(s)	473, 1069
AfiI	CCNNNNNNNGG	7 cut(s)	114, 115, 303, 434, 521, 986, 1007
AflIII	ACRYGT	1 cut(s)	1070
AgsI	TTSAA	5 cut(s)	104, 540, 606, 818, 1090
AjnI	CCWGG	3 cut(s)	465, 777, 820
AloI	GAACNNNNNNTCC	2 cut(s)	425, 457
Alw21I	GWGCWC	1 cut(s)	994
Alw26I	GTCTC	4 cut(s)	217, 306, 644, 1104
AlwI	GGATC	2 cut(s)	1029, 1209
Ama87I	CYCGRG	1 cut(s)	303
AoxI	GGCC	4 cut(s)	180, 425, 1139, 1224
ApeKI	GCWGC	7 cut(s)	559, 566, 665, 933, 936, 947, 968
ArsI	GACNNNNNNTTYG	2 cut(s)	425, 457
AspLEI	GCGC	6 cut(s)	158, 201, 279, 310, 333, 335
AspS9I	GGNCC	6 cut(s)	118, 441, 578, 737, 1140, 1207
AsuHPI	GGTGA	2 cut(s)	58, 225
AsuNHI	GCTAGC	1 cut(s)	950
AvaI	CYCGRG	1 cut(s)	303
AvaII	GGWCC	5 cut(s)	118, 441, 578, 737, 1207
BaeGI	GKGCMC	1 cut(s)	806
BanI	GGYRCC	1 cut(s)	307
Bbv12I	GWGCWC	1 cut(s)	994
BbvCI	CCTCAGC	1 cut(s)	672
BbvI	GCAGC	7 cut(s)	571, 578, 652, 945, 948, 955, 959
BccI	CCATC	4 cut(s)	728, 1058, 1139, 1168
BceAI	ACGGC	7 cut(s)	26, 116, 146, 274, 361, 451, 1018
BciT130I	CCWGG	3 cut(s)	467, 779, 822
BcoDI	GTCTC	4 cut(s)	217, 306, 644, 1104
BfaI	CTAG	5 cut(s)	342, 555, 633, 951, 1261
BfmI	CTRYAG	2 cut(s)	726, 1166
BfoI	RGCGCY	2 cut(s)	159, 311
BglI	GCCNNNNNGGC	1 cut(s)	179
BmcAI	AGTACT	1 cut(s)	473
Bme1390I	CCNGG	3 cut(s)	467, 779, 822
Bme18I	GGWCC	5 cut(s)	118, 441, 578, 737, 1207
BmeT110I	CYCGRG	1 cut(s)	303
BmgT120I	GGNCC	6 cut(s)	118, 441, 578, 737, 1140, 1207
BmiI	GGNNCC	5 cut(s)	119, 309, 349, 442, 1181
BmrFI	CCNGG	3 cut(s)	467, 779, 822
BmrI	ACTGGG	2 cut(s)	124, 243
BmsI	GCATC	3 cut(s)	355, 795, 1120
BmtI	GCTAGC	1 cut(s)	954
BmuI	ACTGGG	2 cut(s)	124, 243
BplI	GAGNNNNNCTC	2 cut(s)	53, 85
Bpu10I	CCTNAGC	2 cut(s)	672, 1052
BpuEI	CTTGAG	1 cut(s)	1120
Bsa29I	ATCGAT	1 cut(s)	1128
BsaBI	GATNNNNATC	2 cut(s)	420, 591
BsaHI	GRCGYC	2 cut(s)	39, 308
BsaI	GGTCTC	1 cut(s)	644
BsaJI	CCNNGG	1 cut(s)	465
BsaXI	ACNNNNNCTCC	4 cut(s)	110, 140, 652, 682
Bsc4I	CCNNNNNNNGG	7 cut(s)	114, 115, 303, 434, 521, 986, 1007
Bse118I	RCCGGY	2 cut(s)	427, 1226
Bse1I	ACTGG	4 cut(s)	119, 249, 484, 884
Bse3DI	GCAATG	1 cut(s)	1028
Bse8I	GATNNNNATC	2 cut(s)	420, 591
BseBI	CCWGG	3 cut(s)	467, 779, 822
BseCI	ATCGAT	1 cut(s)	1128
BseDI	CCNNGG	1 cut(s)	465
BseGI	GGATG	4 cut(s)	760, 871, 1113, 1248
BseJI	GATNNNNATC	2 cut(s)	420, 591
BseLI	CCNNNNNNNGG	7 cut(s)	114, 115, 303, 434, 521, 986, 1007
BseMI	GCAATG	1 cut(s)	1028
BseMII	CTCAG	3 cut(s)	686, 789, 948
BseNI	ACTGG	4 cut(s)	119, 249, 484, 884
BsePI	GCGCGC	1 cut(s)	331
BseRI	GAGGAG	2 cut(s)	660, 966
BseSI	GKGCMC	1 cut(s)	806
BseX3I	CGGCCG	1 cut(s)	425
BseXI	GCAGC	7 cut(s)	571, 578, 652, 945, 948, 955, 959
BseYI	CCCAGC	1 cut(s)	166
Bsh1236I	CGCG	5 cut(s)	199, 277, 333, 394, 1072
Bsh1285I	CGRYCG	2 cut(s)	326, 428
BshFI	GGCC	4 cut(s)	182, 427, 1141, 1226
BshNI	GGYRCC	1 cut(s)	307
BshVI	ATCGAT	1 cut(s)	1128
BsiEI	CGRYCG	2 cut(s)	326, 428
BsiHKAI	GWGCWC	1 cut(s)	994
BsiHKCI	CYCGRG	1 cut(s)	303
BsiSI	CCGG	2 cut(s)	428, 1227
BslFI	GGGAC	3 cut(s)	131, 149, 253
BslI	CCNNNNNNNGG	7 cut(s)	114, 115, 303, 434, 521, 986, 1007
BsmAI	GTCTC	4 cut(s)	217, 306, 644, 1104
BsmBI	CGTCTC	1 cut(s)	217
BsmFI	GGGAC	3 cut(s)	131, 149, 253
BsmI	GAATGC	1 cut(s)	504
BsnI	GGCC	4 cut(s)	182, 427, 1141, 1226
Bso31I	GGTCTC	1 cut(s)	644
BsoBI	CYCGRG	1 cut(s)	303
Bsp1286I	GDGCHC	2 cut(s)	806, 994
Bsp143I	GATC	5 cut(s)	63, 323, 415, 1021, 1201
BspANI	GGCC	4 cut(s)	182, 427, 1141, 1226
BspCNI	CTCAG	3 cut(s)	685, 790, 949
BspDI	ATCGAT	1 cut(s)	1128
BspFNI	CGCG	5 cut(s)	199, 277, 333, 394, 1072
BspLI	GGNNCC	5 cut(s)	119, 309, 349, 442, 1181
BspMAI	CTGCAG	1 cut(s)	1170
BspOI	GCTAGC	1 cut(s)	954
BspPI	GGATC	2 cut(s)	1029, 1209
BspT107I	GGYRCC	1 cut(s)	307
BspTNI	GGTCTC	1 cut(s)	644
BsrBI	CCGCTC	1 cut(s)	974
BsrDI	GCAATG	1 cut(s)	1028
BsrFI	RCCGGY	2 cut(s)	427, 1226
BsrI	ACTGG	4 cut(s)	119, 249, 484, 884
BssAI	RCCGGY	2 cut(s)	427, 1226
BssECI	CCNNGG	1 cut(s)	465
BssHII	GCGCGC	1 cut(s)	331
BssMI	GATC	5 cut(s)	63, 323, 415, 1021, 1201
BssNI	GRCGYC	2 cut(s)	39, 308
Bst2UI	CCWGG	3 cut(s)	467, 779, 822
Bst4CI	ACNGT	1 cut(s)	655
Bst6I	CTCTTC	2 cut(s)	98, 884
BstACI	GRCGYC	2 cut(s)	39, 308
BstC8I	GCNNGC	8 cut(s)	287, 333, 407, 429, 564, 897, 952, 1224
BstDEI	CTNAG	6 cut(s)	672, 798, 957, 983, 1012, 1052
BstENI	CCTNNNNNAGG	1 cut(s)	519
BstF5I	GGATG	4 cut(s)	760, 871, 1113, 1248
BstFNI	CGCG	5 cut(s)	199, 277, 333, 394, 1072
BstH2I	RGCGCY	2 cut(s)	159, 311
BstHHI	GCGC	6 cut(s)	158, 201, 279, 310, 333, 335
BstKTI	GATC	5 cut(s)	66, 326, 418, 1024, 1204
BstMAI	GTCTC	4 cut(s)	217, 306, 644, 1104
BstMBI	GATC	5 cut(s)	63, 323, 415, 1021, 1201
BstMCI	CGRYCG	2 cut(s)	326, 428
BstMWI	GCNNNNNNNGC	5 cut(s)	167, 179, 188, 271, 316
BstNI	CCWGG	3 cut(s)	467, 779, 822
BstNSI	RCATGY	1 cut(s)	899
BstSCI	CCNGG	3 cut(s)	465, 777, 820
BstSFI	CTRYAG	2 cut(s)	726, 1166
BstSLI	GKGCMC	1 cut(s)	806
BstUI	CGCG	5 cut(s)	199, 277, 333, 394, 1072
BstV1I	GCAGC	7 cut(s)	571, 578, 652, 945, 948, 955, 959
BstX2I	RGATCY	1 cut(s)	1201
BstXI	CCANNNNNNTGG	1 cut(s)	145
BstYI	RGATCY	1 cut(s)	1201
BstZI	CGGCCG	1 cut(s)	425
Bsu15I	ATCGAT	1 cut(s)	1128
BsuRI	GGCC	4 cut(s)	182, 427, 1141, 1226
BsuTUI	ATCGAT	1 cut(s)	1128
BtgZI	GCGATG	1 cut(s)	378
BtsCI	GGATG	4 cut(s)	760, 871, 1113, 1248
BtsI	GCAGTG	2 cut(s)	532, 995
BtsIMutI	CAGTG	6 cut(s)	477, 532, 628, 891, 954, 995
Cac8I	GCNNGC	8 cut(s)	287, 333, 407, 429, 564, 897, 952, 1224
CfoI	GCGC	6 cut(s)	158, 201, 279, 310, 333, 335
Cfr10I	RCCGGY	2 cut(s)	427, 1226
Cfr13I	GGNCC	6 cut(s)	118, 441, 578, 737, 1140, 1207
ClaI	ATCGAT	1 cut(s)	1128
CseI	GACGC	1 cut(s)	47
Csp6I	GTAC	2 cut(s)	472, 1068
CviAII	CATG	3 cut(s)	845, 896, 1118
CviQI	GTAC	2 cut(s)	472, 1068
DdeI	CTNAG	6 cut(s)	672, 798, 957, 983, 1012, 1052
DinI	GGCGCC	1 cut(s)	309
DpnI	GATC	5 cut(s)	65, 325, 417, 1023, 1203
DpnII	GATC	5 cut(s)	63, 323, 415, 1021, 1201
EaeI	YGGCCR	1 cut(s)	425
EagI	CGGCCG	1 cut(s)	425
Eam1104I	CTCTTC	2 cut(s)	98, 884
EarI	CTCTTC	2 cut(s)	98, 884
EciI	GGCGGA	2 cut(s)	61, 118
EclXI	CGGCCG	1 cut(s)	425
Eco31I	GGTCTC	1 cut(s)	644
Eco47I	GGWCC	5 cut(s)	118, 441, 578, 737, 1207
Eco52I	CGGCCG	1 cut(s)	425
Eco88I	CYCGRG	1 cut(s)	303
EcoNI	CCTNNNNNAGG	1 cut(s)	519
EcoO109I	RGGNCCY	2 cut(s)	118, 578
EcoRII	CCWGG	3 cut(s)	465, 777, 820
EgeI	GGCGCC	1 cut(s)	309
EheI	GGCGCC	1 cut(s)	309
Esp3I	CGTCTC	1 cut(s)	217
FaeI	CATG	3 cut(s)	848, 899, 1121
FaiI	YATR	8 cut(s)	401, 846, 857, 897, 1076, 1101, 1119, 1232
FaqI	GGGAC	3 cut(s)	131, 149, 253
FatI	CATG	3 cut(s)	844, 895, 1117
FauI	CCCGC	4 cut(s)	204, 279, 431, 855
FokI	GGATG	4 cut(s)	767, 878, 1100, 1235
FspBI	CTAG	5 cut(s)	342, 555, 633, 951, 1261
GlaI	GCGC	6 cut(s)	157, 200, 278, 309, 332, 334
GsaI	CCCAGC	1 cut(s)	170
HaeII	RGCGCY	2 cut(s)	159, 311
HaeIII	GGCC	4 cut(s)	182, 427, 1141, 1226
HapII	CCGG	2 cut(s)	428, 1227
HgaI	GACGC	1 cut(s)	47
HhaI	GCGC	6 cut(s)	158, 201, 279, 310, 333, 335
Hin1I	GRCGYC	2 cut(s)	39, 308
Hin1II	CATG	3 cut(s)	848, 899, 1121
Hin6I	GCGC	6 cut(s)	156, 199, 277, 308, 331, 333
HinP1I	GCGC	6 cut(s)	156, 199, 277, 308, 331, 333
HincII	GTYRAC	2 cut(s)	963, 1038
HindII	GTYRAC	2 cut(s)	963, 1038
HinfI	GANTC	8 cut(s)	20, 104, 125, 385, 421, 452, 536, 959
HpaII	CCGG	2 cut(s)	428, 1227
HphI	GGTGA	2 cut(s)	58, 225
Hpy166II	GTNNAC	3 cut(s)	694, 963, 1038
Hpy188I	TCNGA	8 cut(s)	323, 415, 420, 445, 457, 660, 799, 1109
Hpy188III	TCNNGA	4 cut(s)	17, 790, 878, 1205
Hpy8I	GTNNAC	3 cut(s)	694, 963, 1038
Hpy99I	CGWCG	2 cut(s)	179, 295
HpyAV	CCTTC	4 cut(s)	64, 270, 609, 784
HpyCH4III	ACNGT	1 cut(s)	655
HpyCH4IV	ACGT	1 cut(s)	140
HpyCH4V	TGCA	2 cut(s)	770, 1168
HpyF10VI	GCNNNNNNNGC	5 cut(s)	167, 179, 188, 271, 316
HpyF3I	CTNAG	6 cut(s)	672, 798, 957, 983, 1012, 1052
HpySE526I	ACGT	1 cut(s)	140
Hsp92I	GRCGYC	2 cut(s)	39, 308
Hsp92II	CATG	3 cut(s)	848, 899, 1121
HspAI	GCGC	6 cut(s)	156, 199, 277, 308, 331, 333
KasI	GGCGCC	1 cut(s)	307
KroI	GCCGGC	1 cut(s)	427
KroNI	GCCGGC	1 cut(s)	429
Kzo9I	GATC	5 cut(s)	63, 323, 415, 1021, 1201
LmnI	GCTCC	5 cut(s)	324, 347, 673, 979, 997
Lsp1109I	GCAGC	7 cut(s)	571, 578, 652, 945, 948, 955, 959
LweI	GCATC	3 cut(s)	355, 795, 1120
MaeI	CTAG	5 cut(s)	342, 555, 633, 951, 1261
MaeII	ACGT	1 cut(s)	140
MaeIII	GTNAC	3 cut(s)	251, 449, 1157
MalI	GATC	5 cut(s)	65, 325, 417, 1023, 1203
MbiI	CCGCTC	1 cut(s)	974
MboI	GATC	5 cut(s)	63, 323, 415, 1021, 1201
MboII	GAAGA	6 cut(s)	85, 88, 594, 881, 901, 930
MflI	RGATCY	1 cut(s)	1201
MhlI	GDGCHC	2 cut(s)	806, 994
MluCI	AATT	1 cut(s)	1237
MluI	ACGCGT	1 cut(s)	1070
Mly113I	GGCGCC	1 cut(s)	308
MlyI	GAGTC	4 cut(s)	119, 394, 446, 968
MmeI	TCCRAC	2 cut(s)	683, 895
MroNI	GCCGGC	1 cut(s)	427
MseI	TTAA	1 cut(s)	849
MspA1I	CMGCKG	1 cut(s)	562
MspI	CCGG	2 cut(s)	428, 1227
MspR9I	CCNGG	3 cut(s)	467, 779, 822
Mva1269I	GAATGC	1 cut(s)	504
MvaI	CCWGG	3 cut(s)	467, 779, 822
MvnI	CGCG	5 cut(s)	199, 277, 333, 394, 1072
MwoI	GCNNNNNNNGC	5 cut(s)	167, 179, 188, 271, 316
NaeI	GCCGGC	1 cut(s)	429
NarI	GGCGCC	1 cut(s)	308
NdeII	GATC	5 cut(s)	63, 323, 415, 1021, 1201
NgoMIV	GCCGGC	1 cut(s)	427
NheI	GCTAGC	1 cut(s)	950
NlaIII	CATG	3 cut(s)	848, 899, 1121
NlaIV	GGNNCC	5 cut(s)	119, 309, 349, 442, 1181
NmuCI	GTSAC	1 cut(s)	449
NspI	RCATGY	1 cut(s)	899
PaeI	GCATGC	1 cut(s)	899
PauI	GCGCGC	1 cut(s)	331
PcsI	WCGNNNNNNNCGW	2 cut(s)	129, 441
PctI	GAATGC	1 cut(s)	504
PdiI	GCCGGC	1 cut(s)	429
PfeI	GAWTC	4 cut(s)	20, 104, 421, 536
PflFI	GACNNNGTC	1 cut(s)	41
PfoI	TCCNGGA	1 cut(s)	777
Ple19I	CGATCG	1 cut(s)	326
PleI	GAGTC	4 cut(s)	119, 393, 446, 967
PluTI	GGCGCC	1 cut(s)	311
PpsI	GAGTC	4 cut(s)	119, 393, 446, 967
PpuMI	RGGWCCY	2 cut(s)	118, 578
Psp5II	RGGWCCY	2 cut(s)	118, 578
Psp6I	CCWGG	3 cut(s)	465, 777, 820
PspFI	CCCAGC	1 cut(s)	166
PspGI	CCWGG	3 cut(s)	465, 777, 820
PspN4I	GGNNCC	5 cut(s)	119, 309, 349, 442, 1181
PspPI	GGNCC	6 cut(s)	118, 441, 578, 737, 1140, 1207
PspPPI	RGGWCCY	2 cut(s)	118, 578
PstI	CTGCAG	1 cut(s)	1170
PsuI	RGATCY	1 cut(s)	1201
PsyI	GACNNNGTC	1 cut(s)	41
PteI	GCGCGC	1 cut(s)	331
PvuI	CGATCG	1 cut(s)	326
PvuII	CAGCTG	1 cut(s)	562
RsaI	GTAC	2 cut(s)	473, 1069
RsaNI	GTAC	2 cut(s)	472, 1068
SaqAI	TTAA	1 cut(s)	849
Sau3AI	GATC	5 cut(s)	63, 323, 415, 1021, 1201
Sau96I	GGNCC	6 cut(s)	118, 441, 578, 737, 1140, 1207
ScaI	AGTACT	1 cut(s)	473
SchI	GAGTC	4 cut(s)	119, 394, 446, 968
ScrFI	CCNGG	3 cut(s)	467, 779, 822
SduI	GDGCHC	2 cut(s)	806, 994
SfaNI	GCATC	3 cut(s)	355, 795, 1120
SfcI	CTRYAG	2 cut(s)	726, 1166
SfoI	GGCGCC	1 cut(s)	309
SinI	GGWCC	5 cut(s)	118, 441, 578, 737, 1207
SmlI	CTYRAG	2 cut(s)	15, 1135
SmoI	CTYRAG	2 cut(s)	15, 1135
SphI	GCATGC	1 cut(s)	899
Sse9I	AATT	1 cut(s)	1237
SspDI	GGCGCC	1 cut(s)	307
SspI	AATATT	1 cut(s)	543
SspMI	CTAG	5 cut(s)	342, 555, 633, 951, 1261
StyD4I	CCNGG	3 cut(s)	465, 777, 820
TaaI	ACNGT	1 cut(s)	655
TaiI	ACGT	1 cut(s)	143
TaqI	TCGA	3 cut(s)	123, 326, 1128
TasI	AATT	1 cut(s)	1237
TatI	WGTACW	1 cut(s)	471
TauI	GCSGC	9 cut(s)	161, 173, 194, 277, 338, 376, 572, 947, 974
TfiI	GAWTC	4 cut(s)	20, 104, 421, 536
Tru1I	TTAA	1 cut(s)	849
Tru9I	TTAA	1 cut(s)	849
TscAI	CASTG	6 cut(s)	484, 532, 628, 891, 961, 1002
TseFI	GTSAC	1 cut(s)	449
TseI	GCWGC	7 cut(s)	559, 566, 665, 933, 936, 947, 968
Tsp45I	GTSAC	1 cut(s)	449
TspDTI	ATGAA	3 cut(s)	474, 833, 882
TspGWI	ACGGA	2 cut(s)	1214, 1231
TspRI	CASTG	6 cut(s)	484, 532, 628, 891, 961, 1002
Tth111I	GACNNNGTC	1 cut(s)	41
VpaK11BI	GGWCC	5 cut(s)	118, 441, 578, 737, 1207
XagI	CCTNNNNNAGG	1 cut(s)	519
XceI	RCATGY	1 cut(s)	899
XspI	CTAG	5 cut(s)	342, 555, 633, 951, 1261
ZrmI	AGTACT	1 cut(s)	473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.