Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004014

Physical Location & Seq

Genomic Coordinates Forward (+)

21658399 .. 21661291

Gene Structure 2893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G212000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGGAAACCGAAGCTCAAGAATCCAATCCCCAAAACGACGCCGTAATCAACTCCTTCTGCGAGATCACCTCCGCCTCCAAACAAGAAGCCCTCTTCTTCCTCGAAAGCCACAACTGGGACCTCGATGCCGCCGTTTCGACATTCTTGGACAACAACACCGTCGCCGTCTCAGTCGACGCGCCCACCAACGCCGGCTCGTTTCCAATCCCGGCCTCCCACTCACTCTCGCCATCGCCCTCACACTCGCCCAACTACTCTCCTTCACAGTCGCCGCCGCGCTCTCGCTCGCCGTCTCCGACTCCCTCTCGTGCTCCCTACCAGCTTCGATCGAAGCGCGCCGCCTCCAGTGGGGCCCAAGACAAAGCTGATACCAAGCCGCCTTCTGCGAGCCGTCCACGTGGCATACGCACGCTTTCCGATCTGAATCAGCCGGCCAAGGGTGGGTCCGGCAGTGATTCGGATGAGCCCCAGGAGTACTACACTGGTGGCGAGAAAAGCGGAATGCTTGTCCAAGACCCTACCAAAGGCAGTGATGTGGATTCAATTTTCAGTCAAGCTAGACAGTTAGCGGCCGCCCAGGGACCTATAGATCCCCATCAACCTTCTTCAAGCTCAAAAAGTTTTACTGGAACAGCTAGACTGCTTTCAGGGGAGACTGTTCCAACTGCTGCACCTCAGCCACCTGAAGCTGTTATTCACACCATTACTTTCTGGAGGAATGGGTTTTCTGTAGATGATGGTCCGTTGCGGAGGCTGGATGATCCTGAAAATGCTCCTTTCTTGGAAAGCATCAAGAAGTCTGAGTGCCCAAAAGAACTTGAACCAGCCAATAGGAGGACTGCTGTTCATGTGAATCTTATGAGGCGGGAGGAAGAATACCCTGAACCAGTGAAGCGGCATGTTGCTTTTCAGGGTGTTGGAAGAACTTTAGGTGAGAGCAGCTCTACCTCTGCTGCAGCTACCTCTGAGTTAATTGCTGCTGATCTTCCCCTAAGAGCTGCTCCATTGCCCACAATGGGCTTAACTGTGGATCAGTCATTACCGTCAACCTCTATTCAGCTAAGGTTAGCAGATGGTACACGAATGGTATCTCGCTTCAACTACCACCATACAATTAGAGACATCCATGCTTTTATTGATGCATCAAGACCTGATGGGGCAAGAAGTTACCGATTGCAGACGATGGGGTTTCCTCCGAAACAGCTCTCTGATCTGGACCAGACAATAGAGCAGGCTGGTATAGCCAATTCTGTTATTATCCAAAAACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006511 GO:0006807 GO:0006914 GO:0006996 GO:0006997 GO:0006998 GO:0007030 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010256 GO:0010498 GO:0010921 GO:0016043 GO:0016236 GO:0019208 GO:0019220 GO:0019222 GO:0019538 GO:0019888 GO:0019899 GO:0019941 GO:0022607 GO:0030163 GO:0030234 GO:0031323 GO:0031399 GO:0031468 GO:0032182 GO:0032268 GO:0035303 GO:0035304 GO:0043130 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0043666 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0051117 GO:0051171 GO:0051174 GO:0051246 GO:0051336 GO:0051603 GO:0060255 GO:0061024 GO:0061025 GO:0061919 GO:0065007 GO:0065009 GO:0070925 GO:0071704 GO:0071840 GO:0080090 GO:0098772 GO:1901564 GO:1901565 GO:1901575 GO:1905037

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

SEP UBA_4 UBX

Protein Analysis

424

Amino Acids

45.56

Weight (kDa)

5.73

Isoelectric Point (pI)

64.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004014)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05040 AT1G05040
fragaria_vesca	FvH4_6g42560
malus_domestica	MD09G1112600.v1.1 MD17G1102700.v1.1
prunus_persica	Prupe.3G212000_v2.0.a1
pyrus_communis	pycom09g03700 pycom17g09710
rosa_chinensis	RchiOBHm_Chr2g0158411
rosa_multiflora	Rmu_sc0000469.1_g000016 Rmu_sc0000469.1_g000017 Rmu_sc0004269.1_g000002 Rmu_sc0004855.1_g000011 Rmu_sc0008144.1_g000009 Rmu_sc0018496.1_g000001 Rmu_ssc0000482.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091410 Rroxscaffold_2G00131060 Rroxscaffold_3G00232820 Rroxscaffold_5G00387420
rosa_rugosa	Rorug02G0468400
rosa_samantha	Rh2AG534600 Rh2BG548000 Rh2CG316000 Rh2CG349700 Rh2CG518400 Rh2DG557600 Rh4BG060900 Rh4CG066900
rosa_wichuraiana	Rw0G006730 Rw1G014520 Rw2G044270 Rw6G019090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	174
AccII	CGCG	3 cut(s)	179, 277, 336
AclWI	GGATC	3 cut(s)	584, 755, 1038
AcoI	YGGCCR	2 cut(s)	432, 570
AcuI	CTGAAG	1 cut(s)	705
AcvI	CACGTG	1 cut(s)	398
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	2 cut(s)	476, 1078
AfiI	CCNNNNNNNGG	7 cut(s)	115, 348, 437, 441, 524, 834, 1016
AgsI	TTSAA	4 cut(s)	543, 609, 821, 1099
AjnI	CCWGG	2 cut(s)	468, 576
Alw21I	GWGCWC	1 cut(s)	313
Alw26I	GTCTC	4 cut(s)	172, 297, 647, 1113
AlwI	GGATC	3 cut(s)	584, 755, 1038
AoxI	GGCC	4 cut(s)	210, 351, 432, 570
ApaI	GGGCCC	1 cut(s)	355
ApeKI	GCWGC	6 cut(s)	668, 939, 953, 956, 977, 998
AspLEI	GCGC	4 cut(s)	181, 279, 336, 338
AspS9I	GGNCC	7 cut(s)	118, 351, 352, 444, 581, 740, 1216
AsuC2I	CCSGG	1 cut(s)	209
AsuHPI	GGTGA	2 cut(s)	58, 944
AvaII	GGWCC	5 cut(s)	118, 444, 581, 740, 1216
BaeGI	GKGCMC	2 cut(s)	355, 809
BanII	GRGCYC	2 cut(s)	355, 468
BauI	CACGAG	1 cut(s)	306
BbrPI	CACGTG	1 cut(s)	398
Bbv12I	GWGCWC	1 cut(s)	313
BbvCI	CCTCAGC	1 cut(s)	675
BbvI	GCAGC	6 cut(s)	655, 940, 951, 964, 968, 985
BccI	CCATC	6 cut(s)	238, 603, 731, 1067, 1148, 1177
BceAI	ACGGC	5 cut(s)	26, 116, 149, 274, 375
BciT130I	CCWGG	2 cut(s)	470, 578
BcnI	CCSGG	1 cut(s)	209
BcoDI	GTCTC	4 cut(s)	172, 297, 647, 1113
BfaI	CTAG	3 cut(s)	558, 636, 1270
BfmI	CTRYAG	3 cut(s)	585, 729, 954
BmcAI	AGTACT	1 cut(s)	476
Bme1390I	CCNGG	3 cut(s)	209, 470, 578
Bme18I	GGWCC	5 cut(s)	118, 444, 581, 740, 1216
BmgT120I	GGNCC	7 cut(s)	118, 351, 352, 444, 581, 740, 1216
BmiI	GGNNCC	5 cut(s)	119, 352, 353, 445, 582
BmrFI	CCNGG	3 cut(s)	209, 470, 578
BmrI	ACTGGG	1 cut(s)	124
BmsI	GCATC	4 cut(s)	115, 798, 1129, 1151
BmuI	ACTGGG	1 cut(s)	124
BplI	GAGNNNNNCTC	4 cut(s)	53, 85, 926, 958
BpmI	CTGGAG	2 cut(s)	328, 733
Bpu10I	CCTNAGC	2 cut(s)	675, 1061
BpuMI	CCSGG	1 cut(s)	209
BsaAI	YACGTR	1 cut(s)	398
BsaBI	GATNNNNATC	2 cut(s)	423, 594
BsaHI	GRCGYC	1 cut(s)	39
BsaJI	CCNNGG	4 cut(s)	435, 468, 576, 577
Bsc4I	CCNNNNNNNGG	7 cut(s)	115, 348, 437, 441, 524, 834, 1016
Bse118I	RCCGGY	2 cut(s)	191, 430
Bse1I	ACTGG	5 cut(s)	119, 345, 487, 631, 887
Bse3DI	GCAATG	1 cut(s)	1004
Bse8I	GATNNNNATC	2 cut(s)	423, 594
BseBI	CCWGG	2 cut(s)	470, 578
BseDI	CCNNGG	4 cut(s)	435, 468, 576, 577
BseGI	GGATG	3 cut(s)	466, 763, 1122
BseJI	GATNNNNATC	2 cut(s)	423, 594
BseLI	CCNNNNNNNGG	7 cut(s)	115, 348, 437, 441, 524, 834, 1016
BseMI	GCAATG	1 cut(s)	1004
BseMII	CTCAG	4 cut(s)	183, 689, 792, 957
BseNI	ACTGG	5 cut(s)	119, 345, 487, 631, 887
BsePI	GCGCGC	1 cut(s)	334
BseSI	GKGCMC	2 cut(s)	355, 809
BseX3I	CGGCCG	1 cut(s)	570
BseXI	GCAGC	6 cut(s)	655, 940, 951, 964, 968, 985
BsgI	GTGCAG	1 cut(s)	654
Bsh1236I	CGCG	3 cut(s)	179, 277, 336
Bsh1285I	CGRYCG	2 cut(s)	329, 573
BshFI	GGCC	4 cut(s)	212, 353, 434, 572
BsiEI	CGRYCG	2 cut(s)	329, 573
BsiHKAI	GWGCWC	1 cut(s)	313
BsiSI	CCGG	4 cut(s)	192, 209, 431, 447
BslFI	GGGAC	2 cut(s)	131, 594
BslI	CCNNNNNNNGG	7 cut(s)	115, 348, 437, 441, 524, 834, 1016
BsmAI	GTCTC	4 cut(s)	172, 297, 647, 1113
BsmBI	CGTCTC	2 cut(s)	172, 297
BsmFI	GGGAC	2 cut(s)	131, 594
BsmI	GAATGC	1 cut(s)	507
BsnI	GGCC	4 cut(s)	212, 353, 434, 572
Bsp120I	GGGCCC	1 cut(s)	351
Bsp1286I	GDGCHC	4 cut(s)	313, 355, 468, 809
Bsp143I	GATC	8 cut(s)	63, 326, 418, 589, 760, 982, 1030, 1210
BspANI	GGCC	4 cut(s)	212, 353, 434, 572
BspCNI	CTCAG	4 cut(s)	182, 688, 793, 958
BspFNI	CGCG	3 cut(s)	179, 277, 336
BspLI	GGNNCC	5 cut(s)	119, 352, 353, 445, 582
BspMAI	CTGCAG	1 cut(s)	958
BspPI	GGATC	3 cut(s)	584, 755, 1038
BsrDI	GCAATG	1 cut(s)	1004
BsrFI	RCCGGY	2 cut(s)	191, 430
BsrI	ACTGG	5 cut(s)	119, 345, 487, 631, 887
BssAI	RCCGGY	2 cut(s)	191, 430
BssECI	CCNNGG	4 cut(s)	435, 468, 576, 577
BssHII	GCGCGC	1 cut(s)	334
BssMI	GATC	8 cut(s)	63, 326, 418, 589, 760, 982, 1030, 1210
BssNI	GRCGYC	1 cut(s)	39
BssSI	CACGAG	1 cut(s)	306
BssT1I	CCWWGG	1 cut(s)	435
Bst2BI	CACGAG	1 cut(s)	306
Bst2UI	CCWGG	2 cut(s)	470, 578
Bst4CI	ACNGT	6 cut(s)	160, 267, 564, 658, 1027, 1044
Bst6I	CTCTTC	1 cut(s)	98
BstACI	GRCGYC	1 cut(s)	39
BstBAI	YACGTR	1 cut(s)	398
BstC8I	GCNNGC	7 cut(s)	193, 287, 336, 388, 410, 432, 1233
BstDEI	CTNAG	6 cut(s)	169, 675, 801, 966, 992, 1061
BstENI	CCTNNNNNAGG	1 cut(s)	522
BstF5I	GGATG	3 cut(s)	466, 763, 1122
BstFNI	CGCG	3 cut(s)	179, 277, 336
BstHHI	GCGC	4 cut(s)	181, 279, 336, 338
BstKTI	GATC	8 cut(s)	66, 329, 421, 592, 763, 985, 1033, 1213
BstMAI	GTCTC	4 cut(s)	172, 297, 647, 1113
BstMBI	GATC	8 cut(s)	63, 326, 418, 589, 760, 982, 1030, 1210
BstMCI	CGRYCG	2 cut(s)	329, 573
BstMWI	GCNNNNNNNGC	2 cut(s)	495, 1241
BstNI	CCWGG	2 cut(s)	470, 578
BstNSI	RCATGY	1 cut(s)	902
BstSCI	CCNGG	3 cut(s)	207, 468, 576
BstSFI	CTRYAG	3 cut(s)	585, 729, 954
BstSLI	GKGCMC	2 cut(s)	355, 809
BstUI	CGCG	3 cut(s)	179, 277, 336
BstV1I	GCAGC	6 cut(s)	655, 940, 951, 964, 968, 985
BstX2I	RGATCY	1 cut(s)	589
BstYI	RGATCY	1 cut(s)	589
BstZI	CGGCCG	1 cut(s)	570
BsuRI	GGCC	4 cut(s)	212, 353, 434, 572
BtgZI	GCGATG	1 cut(s)	216
BtsCI	GGATG	3 cut(s)	466, 763, 1122
BtsI	GCAGTG	2 cut(s)	457, 535
BtsIMutI	CAGTG	5 cut(s)	352, 457, 480, 535, 894
Cac8I	GCNNGC	7 cut(s)	193, 287, 336, 388, 410, 432, 1233
CciNI	GCGGCCGC	1 cut(s)	570
CfoI	GCGC	4 cut(s)	181, 279, 336, 338
Cfr10I	RCCGGY	2 cut(s)	191, 430
Cfr13I	GGNCC	7 cut(s)	118, 351, 352, 444, 581, 740, 1216
CseI	GACGC	2 cut(s)	47, 185
Csp6I	GTAC	2 cut(s)	475, 1077
CviAII	CATG	3 cut(s)	848, 899, 1127
CviQI	GTAC	2 cut(s)	475, 1077
DdeI	CTNAG	6 cut(s)	169, 675, 801, 966, 992, 1061
DpnI	GATC	8 cut(s)	65, 328, 420, 591, 762, 984, 1032, 1212
DpnII	GATC	8 cut(s)	63, 326, 418, 589, 760, 982, 1030, 1210
EaeI	YGGCCR	2 cut(s)	432, 570
EagI	CGGCCG	1 cut(s)	570
Eam1104I	CTCTTC	1 cut(s)	98
EarI	CTCTTC	1 cut(s)	98
EciI	GGCGGA	1 cut(s)	61
EclXI	CGGCCG	1 cut(s)	570
Eco130I	CCWWGG	1 cut(s)	435
Eco24I	GRGCYC	2 cut(s)	355, 468
Eco47I	GGWCC	5 cut(s)	118, 444, 581, 740, 1216
Eco52I	CGGCCG	1 cut(s)	570
Eco57I	CTGAAG	1 cut(s)	705
Eco72I	CACGTG	1 cut(s)	398
EcoNI	CCTNNNNNAGG	1 cut(s)	522
EcoO109I	RGGNCCY	3 cut(s)	118, 351, 581
EcoRII	CCWGG	2 cut(s)	468, 576
EcoT14I	CCWWGG	1 cut(s)	435
EcoT22I	ATGCAT	1 cut(s)	1144
EcoT38I	GRGCYC	2 cut(s)	355, 468
ErhI	CCWWGG	1 cut(s)	435
Esp3I	CGTCTC	2 cut(s)	172, 297
FaeI	CATG	3 cut(s)	851, 902, 1130
FaiI	YATR	8 cut(s)	404, 587, 849, 860, 900, 1110, 1128, 1241
FaqI	GGGAC	2 cut(s)	131, 594
FatI	CATG	3 cut(s)	847, 898, 1126
FauI	CCCGC	1 cut(s)	858
FblI	GTMKAC	1 cut(s)	174
FokI	GGATG	3 cut(s)	473, 770, 1109
FriOI	GRGCYC	2 cut(s)	355, 468
FspBI	CTAG	3 cut(s)	558, 636, 1270
GlaI	GCGC	4 cut(s)	180, 278, 335, 337
GsuI	CTGGAG	2 cut(s)	328, 733
HaeIII	GGCC	4 cut(s)	212, 353, 434, 572
HapII	CCGG	4 cut(s)	192, 209, 431, 447
HgaI	GACGC	2 cut(s)	47, 185
HhaI	GCGC	4 cut(s)	181, 279, 336, 338
Hin1I	GRCGYC	1 cut(s)	39
Hin1II	CATG	3 cut(s)	851, 902, 1130
Hin6I	GCGC	4 cut(s)	179, 277, 334, 336
HinP1I	GCGC	4 cut(s)	179, 277, 334, 336
HincII	GTYRAC	2 cut(s)	175, 1047
HindII	GTYRAC	2 cut(s)	175, 1047
HinfI	GANTC	6 cut(s)	20, 298, 424, 455, 539, 853
HpaII	CCGG	4 cut(s)	192, 209, 431, 447
HphI	GGTGA	2 cut(s)	58, 944
Hpy166II	GTNNAC	4 cut(s)	175, 395, 1047, 1079
Hpy188I	TCNGA	8 cut(s)	297, 418, 423, 460, 802, 967, 1197, 1210
Hpy188III	TCNNGA	6 cut(s)	17, 712, 764, 793, 1146, 1214
Hpy8I	GTNNAC	4 cut(s)	175, 395, 1047, 1079
Hpy99I	CGWCG	3 cut(s)	41, 164, 179
HpyAV	CCTTC	4 cut(s)	64, 270, 390, 612
HpyCH4III	ACNGT	6 cut(s)	160, 267, 564, 658, 1027, 1044
HpyCH4IV	ACGT	1 cut(s)	397
HpyCH4V	TGCA	4 cut(s)	671, 956, 1142, 1177
HpyF10VI	GCNNNNNNNGC	2 cut(s)	495, 1241
HpyF3I	CTNAG	6 cut(s)	169, 675, 801, 966, 992, 1061
HpySE526I	ACGT	1 cut(s)	397
Hsp92I	GRCGYC	1 cut(s)	39
Hsp92II	CATG	3 cut(s)	851, 902, 1130
HspAI	GCGC	4 cut(s)	179, 277, 334, 336
KroI	GCCGGC	2 cut(s)	191, 430
KroNI	GCCGGC	2 cut(s)	193, 432
Kzo9I	GATC	8 cut(s)	63, 326, 418, 589, 760, 982, 1030, 1210
LmnI	GCTCC	3 cut(s)	316, 778, 1006
Lsp1109I	GCAGC	6 cut(s)	655, 940, 951, 964, 968, 985
LweI	GCATC	4 cut(s)	115, 798, 1129, 1151
MaeI	CTAG	3 cut(s)	558, 636, 1270
MaeII	ACGT	1 cut(s)	397
MaeIII	GTNAC	1 cut(s)	1166
MalI	GATC	8 cut(s)	65, 328, 420, 591, 762, 984, 1032, 1212
MboI	GATC	8 cut(s)	63, 326, 418, 589, 760, 982, 1030, 1210
MboII	GAAGA	6 cut(s)	85, 88, 597, 884, 933, 977
MflI	RGATCY	1 cut(s)	589
MhlI	GDGCHC	4 cut(s)	313, 355, 468, 809
MluCI	AATT	4 cut(s)	543, 972, 1113, 1246
MlyI	GAGTC	1 cut(s)	292
MmeI	TCCRAC	3 cut(s)	320, 686, 898
Mph1103I	ATGCAT	1 cut(s)	1144
MroNI	GCCGGC	2 cut(s)	191, 430
MseI	TTAA	2 cut(s)	971, 1022
MspI	CCGG	4 cut(s)	192, 209, 431, 447
MspR9I	CCNGG	3 cut(s)	209, 470, 578
Mva1269I	GAATGC	1 cut(s)	507
MvaI	CCWGG	2 cut(s)	470, 578
MvnI	CGCG	3 cut(s)	179, 277, 336
MwoI	GCNNNNNNNGC	2 cut(s)	495, 1241
NaeI	GCCGGC	2 cut(s)	193, 432
NciI	CCSGG	1 cut(s)	209
NdeII	GATC	8 cut(s)	63, 326, 418, 589, 760, 982, 1030, 1210
NgoMIV	GCCGGC	2 cut(s)	191, 430
NlaIII	CATG	3 cut(s)	851, 902, 1130
NlaIV	GGNNCC	5 cut(s)	119, 352, 353, 445, 582
NotI	GCGGCCGC	1 cut(s)	570
NsiI	ATGCAT	1 cut(s)	1144
NspI	RCATGY	1 cut(s)	902
PasI	CCCWGGG	1 cut(s)	577
PauI	GCGCGC	1 cut(s)	334
PcsI	WCGNNNNNNNCGW	2 cut(s)	129, 293
PctI	GAATGC	1 cut(s)	507
PdiI	GCCGGC	2 cut(s)	193, 432
PfeI	GAWTC	5 cut(s)	20, 424, 455, 539, 853
Ple19I	CGATCG	1 cut(s)	329
PleI	GAGTC	1 cut(s)	292
PmaCI	CACGTG	1 cut(s)	398
PmlI	CACGTG	1 cut(s)	398
PpsI	GAGTC	1 cut(s)	292
Ppu21I	YACGTR	1 cut(s)	398
PpuMI	RGGWCCY	2 cut(s)	118, 581
Psp5II	RGGWCCY	2 cut(s)	118, 581
Psp6I	CCWGG	2 cut(s)	468, 576
PspCI	CACGTG	1 cut(s)	398
PspGI	CCWGG	2 cut(s)	468, 576
PspN4I	GGNNCC	5 cut(s)	119, 352, 353, 445, 582
PspOMI	GGGCCC	1 cut(s)	351
PspPI	GGNCC	7 cut(s)	118, 351, 352, 444, 581, 740, 1216
PspPPI	RGGWCCY	2 cut(s)	118, 581
PstI	CTGCAG	1 cut(s)	958
PsuI	RGATCY	1 cut(s)	589
PteI	GCGCGC	1 cut(s)	334
PvuI	CGATCG	1 cut(s)	329
RsaI	GTAC	2 cut(s)	476, 1078
RsaNI	GTAC	2 cut(s)	475, 1077
SalI	GTCGAC	1 cut(s)	173
SaqAI	TTAA	2 cut(s)	971, 1022
Sau3AI	GATC	8 cut(s)	63, 326, 418, 589, 760, 982, 1030, 1210
Sau96I	GGNCC	7 cut(s)	118, 351, 352, 444, 581, 740, 1216
ScaI	AGTACT	1 cut(s)	476
SchI	GAGTC	1 cut(s)	292
ScrFI	CCNGG	3 cut(s)	209, 470, 578
SduI	GDGCHC	4 cut(s)	313, 355, 468, 809
SfaNI	GCATC	4 cut(s)	115, 798, 1129, 1151
SfcI	CTRYAG	3 cut(s)	585, 729, 954
SinI	GGWCC	5 cut(s)	118, 444, 581, 740, 1216
SmlI	CTYRAG	1 cut(s)	15
SmoI	CTYRAG	1 cut(s)	15
Sse9I	AATT	4 cut(s)	543, 972, 1113, 1246
SspMI	CTAG	3 cut(s)	558, 636, 1270
StyD4I	CCNGG	3 cut(s)	207, 468, 576
StyI	CCWWGG	1 cut(s)	435
TaaI	ACNGT	6 cut(s)	160, 267, 564, 658, 1027, 1044
TaiI	ACGT	1 cut(s)	400
TaqI	TCGA	6 cut(s)	102, 123, 137, 174, 325, 329
TasI	AATT	4 cut(s)	543, 972, 1113, 1246
TatI	WGTACW	1 cut(s)	474
TauI	GCSGC	8 cut(s)	131, 274, 277, 341, 379, 572, 575, 898
TfiI	GAWTC	5 cut(s)	20, 424, 455, 539, 853
Tru1I	TTAA	2 cut(s)	971, 1022
Tru9I	TTAA	2 cut(s)	971, 1022
TscAI	CASTG	5 cut(s)	352, 457, 487, 535, 894
TseI	GCWGC	6 cut(s)	668, 939, 953, 956, 977, 998
TspDTI	ATGAA	1 cut(s)	836
TspGWI	ACGGA	1 cut(s)	732
TspRI	CASTG	5 cut(s)	352, 457, 487, 535, 894
VpaK11BI	GGWCC	5 cut(s)	118, 444, 581, 740, 1216
XagI	CCTNNNNNAGG	1 cut(s)	522
XceI	RCATGY	1 cut(s)	902
XmiI	GTMKAC	1 cut(s)	174
XspI	CTAG	3 cut(s)	558, 636, 1270
ZrmI	AGTACT	1 cut(s)	476
Zsp2I	ATGCAT	1 cut(s)	1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.