Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002683

Physical Location & Seq

Genomic Coordinates Forward (+)

34546996 .. 34550135

Gene Structure 3140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1271200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGTTTCAAAAAAAGTCTGGCATTTTAAAAGCCATTTCTGGAATTCCGGTGCTTTTAATACAACGCAACTACCTCAGCGTCCTCTCAAGCTGTCAACCTTCCCCCTCCCTCCTTCAAATTTCTCTCGTTTTCTCTCACTTTGTGTCACTTTCTCACCAGCCAAACACAGTCACCACAGAACCAAATTCGAATTCAAATAAAAAACTGGATAAAACCCATTTCGTAAAGCGCCTCGAACAACAAAACCCACCTCTGTTTTTCTCCATTGGAGTTGAAAAAATGAAGCCCCCGAAGATGATTGTGTTACTGTTATGTTGCCTTGGTGTTTTCATGGCTGCGAATTCTGATCTGGCTTCCGACAGAGATGCCTTGCTGGCGCTCAGAACCGCCGTGGGAGGCCGTACAATGGGCTGGAACGTGACGGAGACCAACCCCTGTTCGTGGCTCGGCGTCAAATGCGAGTCGGACCGGGTCACCGAGTTGCGGCTTCCTGGTTGGGCATTAGTTGGGCAGCTTCCTTTGGGTCTCGGAAACTTAACCCAGCTTTTGACCCTCTCTCTGCGCGTAAACGCGCTCTCCGGTCCACTACCGAACGACCTTGTCAACCTAGTCAACCTCAAGAATCTCTACTTGCAAGGTAACTCGTTTTCCGGTCCAATTCCTGAGTTTTTGTTCAAATTGAAAAGCCTTATGAGATTGAACCTTGAGAAAAATAAATTCTCCGGCGAAATCTCGTCGGCGTTTAATAATTTGACGAGTTTGGTAAGTCTGCATTTGGAGGTGAATCAGCTTACTGGGTCAATTCCTGAGCTGGGTTTGCCATCTCTTGGACAATTCAACGTTTCCTTTAACCAGTTGAACGGGTCGGTTCCTTCGAAGCTTTCGGGTTGGCCTGAAAACGCGTTCAAGGGGAATTTGCTTTGTGGGAAGCCGTTGAAGGCCTGCAATGGGACTGAGAATGCTGGGAAGAAGAATAAGTTGGCTGGTGGGGCAATTGCAGGGATTGTGATTGGTAGTATTATTGGGTTCTTGGTGATAGTTGCCATTGTGATATATTTGTGCCGAAGAAAGAAAAATGGGGAAAAAGGTACAAACTTTGCTGTGCCGGGGAAGCCTCAGGAGGCTGAAACCTCCCGTGGAAAGGTGGTGCTGGATAGGAGTTCGAGTACTGATTATTCATCTGCATCAAAAGGGAGTGTGAAGAGTGGTGGTGGGAATAAGAGTTTAGTGTTCTTCGGGCATGTGGTGAAGGTGTTTGATTTGGAGGATTTATTGAGGGCATCCGCTGAGGTACTTGGAAAGGGGACATTTGGAACTACGTACAAGGCAACTCTGGAAATGGGGGTGTCAGTGGCAGTGAAGAGGTTGAAGGAAGTGGCTGTATCAGAGAAGGAATTCAGGGAGAAGATTGAAGAGATTGGGAGAATGGATCATTCAAATTTGGTCCCACTCAGGGCTTACTACTACAGCAGGGATGAGAAGCTTTTTGTGTATGATTACATGCCTATGGGAAGCTTATCTGCTCTGTTGCACGGAACCAGAGGTTCCGGAAGGACTCCATTGAATTGGGAAACAAGGTCTGGTATTGCTGTAGGAGTTGCTCGTGCAATTACATACATACATTCTCATGGTCCCACTACCTCCCATGGAAACATTAAATCTTCAAACATCCTTCTCACTAGATCCTATGAAGCCTGTGTTTCTGATTTTTGCCTTGCTCATCTTGCAAGCCCAACATCTACTCCGAACCGCATTTCTGGTTATCGTGCCCCAGAACTCACAGATACTAGCAAAGTAACCCAAAAGGCAGATGTTTATAGTTTTGGCGTATTGCTTTTGGAGATACTTACAGGAAAGCCTCCAACCCAAACTATCATGAACGAGGAAGGAGTAGACCTTCCAAGATGGGTTCACTCAGTGGTTCGAGAGGAGTGGACTGCTGAGGTGTTTGACTTCGAGCTTCTCAGGTACCAGAATGTTGAGGAGGAGATGGTTCAGCTTTTACAGATTGCACTCGAATGTACAGTTCAGTATCCTGATAGCCGCCCTTCAATGGGTGAGGTGACTAGCCGAATCGAGGACCTTTACAGTTCTAGTTTAAAGCACGAACAAGATGCGAATCCTGATATCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0008150 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0016020 GO:0030054 GO:0030312 GO:0031090 GO:0031224 GO:0031225 GO:0031226 GO:0033993 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071944 GO:0097305 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

712

Amino Acids

77.73

Weight (kDa)

8.88

Isoelectric Point (pI)

34.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	118 - 153	2.5e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	169 - 278	2.3e-07	Leucine-rich repeat region
PK_Tyr_Ser-Thr	PF07714	430 - 691	4e-34	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	430 - 688	1.6e-33	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002683)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48480
fragaria_vesca	FvH4_2g12190 FvH4_2g12190 FvH4_5g17570
malus_domestica	MD02G1259100.v1.1 MD06G1231600.v1.1 MD09G1086600.v1.1 MD09G1271200.v1.1 MD14G1238300.v1.1 MD17G1269300.v1.1
prunus_persica	Prupe.3G017300_v2.0.a1 Prupe.5G235500_v2.0.a1
pyrus_communis	pycom06g20550 pycom09g18220 pycom14g19950 pycom17g26800
rosa_chinensis	RchiOBHm_Chr3g0491091 RchiOBHm_Chr7g0178081
rosa_laevigata	RLG00000005473 RLG00000022865
rosa_multiflora	Rmu_co8170494.1_g000001 Rmu_co8379533.1_g000001 Rmu_co8445967.1_g000001 Rmu_sc0000425.1_g000007 Rmu_sc0005038.1_g000014 Rmu_ssc0000386.1_g000061 Rmu_ssc0000386.1_g000063
rosa_roxburghii	Rroxscaffold_6G00393220
rosa_rugosa	Rorug03G0246000 Rorug06G0413300
rosa_samantha	Rh3AG296200 Rh3BG332200 Rh3CG329300 Rh3DG329900 Rh7AG012600 Rh7BG012500 Rh7CG012500 Rh7DG012800
rosa_wichuraiana	Rw3G026140 Rw7G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1968
AccB1I	GGYRCC	1 cut(s)	1968
AccB7I	CCANNNNNTGG	1 cut(s)	827
AccI	GTMKAC	1 cut(s)	1893
AccII	CGCG	3 cut(s)	564, 572, 902
AccIII	TCCGGA	1 cut(s)	1547
AciI	CCGC	5 cut(s)	387, 484, 1284, 1750, 2044
AclI	AACGTT	1 cut(s)	840
AclWI	GGATC	2 cut(s)	1437, 1677
AcsI	RAATTY	9 cut(s)	42, 117, 184, 190, 340, 716, 913, 1394, 1438
AcyI	GRCGYC	1 cut(s)	450
AdeI	CACNNNGTG	2 cut(s)	142, 1918
AfaI	GTAC	7 cut(s)	403, 1090, 1168, 1293, 1322, 1970, 2023
AflIII	ACRYGT	1 cut(s)	900
AjnI	CCWGG	1 cut(s)	490
AjuI	GAANNNNNNNTTGG	4 cut(s)	175, 207, 962, 994
Alw26I	GTCTC	2 cut(s)	419, 530
AlwI	GGATC	2 cut(s)	1437, 1677
Aor13HI	TCCGGA	1 cut(s)	1547
AoxI	GGCC	3 cut(s)	397, 890, 939
ApeKI	GCWGC	2 cut(s)	335, 511
ApoI	RAATTY	9 cut(s)	42, 117, 184, 190, 340, 716, 913, 1394, 1438
Asp700I	GAANNNNTTC	1 cut(s)	1394
Asp718I	GGTACC	1 cut(s)	1968
AspLEI	GCGC	4 cut(s)	231, 379, 564, 574
AspS9I	GGNCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
AsuC2I	CCSGG	2 cut(s)	470, 1107
AsuHPI	GGTGA	8 cut(s)	146, 163, 466, 793, 1045, 1258, 2069, 2074
AsuII	TTCGAA	2 cut(s)	188, 875
AvaII	GGWCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
AxyI	CCTNAGG	1 cut(s)	1116
BaeGI	GKGCMC	1 cut(s)	1771
BanI	GGYRCC	1 cut(s)	1968
BauI	CACGAG	1 cut(s)	1602
BbvCI	CCTCAGC	3 cut(s)	74, 1287, 1941
BbvI	GCAGC	2 cut(s)	322, 523
BccI	CCATC	3 cut(s)	829, 1899, 1984
BceAI	ACGGC	3 cut(s)	374, 384, 916
BcgI	CGANNNNNNTGC	4 cut(s)	347, 381, 2096, 2130
BciT130I	CCWGG	1 cut(s)	492
BciVI	GTATCC	1 cut(s)	2043
BcnI	CCSGG	2 cut(s)	470, 1107
BcoDI	GTCTC	2 cut(s)	419, 530
BfaI	CTAG	5 cut(s)	608, 1680, 1788, 2067, 2094
BfmI	CTRYAG	2 cut(s)	1465, 1590
BfoI	RGCGCY	2 cut(s)	232, 380
BfuI	GTATCC	1 cut(s)	2043
BglI	GCCNNNNNGGC	1 cut(s)	374
BisI	GCNGC	4 cut(s)	336, 485, 512, 2044
BlsI	GCNGC	4 cut(s)	337, 486, 513, 2045
BmcAI	AGTACT	1 cut(s)	1168
Bme1390I	CCNGG	3 cut(s)	470, 492, 1107
Bme18I	GGWCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
BmgT120I	GGNCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
BmiI	GGNNCC	6 cut(s)	870, 1446, 1537, 1546, 1633, 1970
BmrFI	CCNGG	3 cut(s)	470, 492, 1107
BmrI	ACTGGG	1 cut(s)	804
BmsI	GCATC	4 cut(s)	355, 1193, 1289, 2104
BmuI	ACTGGG	1 cut(s)	804
Bpu10I	CCTNAGC	4 cut(s)	74, 807, 1287, 1941
Bpu14I	TTCGAA	2 cut(s)	188, 875
BpuEI	CTTGAG	3 cut(s)	70, 602, 725
BpuMI	CCSGG	2 cut(s)	470, 1107
BsaAI	YACGTR	1 cut(s)	1320
BsaBI	GATNNNNATC	1 cut(s)	2118
BsaHI	GRCGYC	1 cut(s)	450
BsaI	GGTCTC	2 cut(s)	419, 530
BsaJI	CCNNGG	5 cut(s)	319, 390, 1106, 1135, 1645
BsaWI	WCCGGW	4 cut(s)	46, 578, 650, 1547
BsaXI	ACNNNNNCTCC	6 cut(s)	560, 590, 1150, 1180, 1726, 1756
Bse1I	ACTGG	3 cut(s)	210, 799, 853
Bse21I	CCTNAGG	1 cut(s)	1116
Bse3DI	GCAATG	1 cut(s)	952
Bse8I	GATNNNNATC	1 cut(s)	2118
BseAI	TCCGGA	1 cut(s)	1547
BseBI	CCWGG	1 cut(s)	492
BseDI	CCNNGG	5 cut(s)	319, 390, 1106, 1135, 1645
BseGI	GGATG	3 cut(s)	1280, 1480, 1668
BseJI	GATNNNNATC	1 cut(s)	2118
BseMI	GCAATG	1 cut(s)	952
BseNI	ACTGG	3 cut(s)	210, 799, 853
BseRI	GAGGAG	3 cut(s)	1943, 1997, 2000
BseSI	GKGCMC	1 cut(s)	1771
BseXI	GCAGC	2 cut(s)	322, 523
BseYI	CCCAGC	3 cut(s)	540, 811, 962
Bsh1236I	CGCG	3 cut(s)	564, 572, 902
BshFI	GGCC	3 cut(s)	399, 892, 941
BshNI	GGYRCC	1 cut(s)	1968
BsiSI	CCGG	7 cut(s)	47, 469, 579, 651, 723, 1106, 1548
BslFI	GGGAC	4 cut(s)	964, 1318, 1430, 1617
BsmAI	GTCTC	2 cut(s)	419, 530
BsmFI	GGGAC	4 cut(s)	964, 1318, 1430, 1617
BsmI	GAATGC	1 cut(s)	964
BsnI	GGCC	3 cut(s)	399, 892, 941
Bso31I	GGTCTC	2 cut(s)	419, 530
Bsp119I	TTCGAA	2 cut(s)	188, 875
Bsp1286I	GDGCHC	1 cut(s)	1771
Bsp13I	TCCGGA	1 cut(s)	1547
Bsp1407I	TGTACA	1 cut(s)	2021
Bsp143I	GATC	3 cut(s)	346, 1429, 1682
Bsp19I	CCATGG	1 cut(s)	1645
BspACI	CCGC	5 cut(s)	387, 484, 1284, 1750, 2044
BspANI	GGCC	3 cut(s)	399, 892, 941
BspEI	TCCGGA	1 cut(s)	1547
BspFNI	CGCG	3 cut(s)	564, 572, 902
BspHI	TCATGA	2 cut(s)	1875, 2132
BspLI	GGNNCC	6 cut(s)	870, 1446, 1537, 1546, 1633, 1970
BspPI	GGATC	2 cut(s)	1437, 1677
BspT104I	TTCGAA	2 cut(s)	188, 875
BspT107I	GGYRCC	1 cut(s)	1968
BspTNI	GGTCTC	2 cut(s)	419, 530
BsrDI	GCAATG	1 cut(s)	952
BsrGI	TGTACA	1 cut(s)	2021
BsrI	ACTGG	3 cut(s)	210, 799, 853
BssECI	CCNNGG	5 cut(s)	319, 390, 1106, 1135, 1645
BssMI	GATC	3 cut(s)	346, 1429, 1682
BssNI	GRCGYC	1 cut(s)	450
BssSI	CACGAG	1 cut(s)	1602
BssT1I	CCWWGG	2 cut(s)	319, 1645
Bst2BI	CACGAG	1 cut(s)	1602
Bst2UI	CCWGG	1 cut(s)	492
Bst4CI	ACNGT	4 cut(s)	169, 309, 2026, 2090
Bst6I	CTCTTC	3 cut(s)	1196, 1355, 1407
BstACI	GRCGYC	1 cut(s)	450
BstAUI	TGTACA	1 cut(s)	2021
BstBAI	YACGTR	1 cut(s)	1320
BstBI	TTCGAA	2 cut(s)	188, 875
BstC8I	GCNNGC	3 cut(s)	375, 943, 1729
BstDSI	CCRYGG	3 cut(s)	390, 1135, 1645
BstEII	GGTNACC	1 cut(s)	472
BstF5I	GGATG	3 cut(s)	1280, 1480, 1668
BstFNI	CGCG	3 cut(s)	564, 572, 902
BstH2I	RGCGCY	2 cut(s)	232, 380
BstHHI	GCGC	4 cut(s)	231, 379, 564, 574
BstKTI	GATC	3 cut(s)	349, 1432, 1685
BstMAI	GTCTC	2 cut(s)	419, 530
BstMBI	GATC	3 cut(s)	346, 1429, 1682
BstMWI	GCNNNNNNNGC	6 cut(s)	374, 456, 817, 989, 1111, 1724
BstNI	CCWGG	1 cut(s)	492
BstNSI	RCATGY	2 cut(s)	1244, 1504
BstPI	GGTNACC	1 cut(s)	472
BstSCI	CCNGG	3 cut(s)	468, 490, 1105
BstSFI	CTRYAG	2 cut(s)	1465, 1590
BstSLI	GKGCMC	1 cut(s)	1771
BstSNI	TACGTA	1 cut(s)	1320
BstUI	CGCG	3 cut(s)	564, 572, 902
BstV1I	GCAGC	2 cut(s)	322, 523
BstX2I	RGATCY	1 cut(s)	1682
BstXI	CCANNNNNNTGG	1 cut(s)	1566
BstYI	RGATCY	1 cut(s)	1682
Bsu36I	CCTNAGG	1 cut(s)	1116
BsuI	GTATCC	1 cut(s)	2043
BsuRI	GGCC	3 cut(s)	399, 892, 941
BtgI	CCRYGG	3 cut(s)	390, 1135, 1645
BtsCI	GGATG	3 cut(s)	1280, 1480, 1668
BtsI	GCAGTG	1 cut(s)	1362
BtsIMutI	CAGTG	3 cut(s)	1356, 1362, 1923
Cac8I	GCNNGC	3 cut(s)	375, 943, 1729
CciI	TCATGA	2 cut(s)	1875, 2132
CfoI	GCGC	4 cut(s)	231, 379, 564, 574
Cfr13I	GGNCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
CpoI	CGGWCCG	1 cut(s)	466
CseI	GACGC	2 cut(s)	67, 439
Csp6I	GTAC	7 cut(s)	402, 1089, 1167, 1292, 1321, 1969, 2022
CspI	CGGWCCG	1 cut(s)	466
CviAII	CATG	7 cut(s)	331, 1241, 1501, 1628, 1646, 1876, 2133
CviQI	GTAC	7 cut(s)	402, 1089, 1167, 1292, 1321, 1969, 2022
DpnI	GATC	3 cut(s)	348, 1431, 1684
DpnII	GATC	3 cut(s)	346, 1429, 1682
DraI	TTTAAA	2 cut(s)	27, 2100
DraIII	CACNNNGTG	2 cut(s)	142, 1918
Eam1104I	CTCTTC	3 cut(s)	1196, 1355, 1407
EarI	CTCTTC	3 cut(s)	1196, 1355, 1407
Eco105I	TACGTA	1 cut(s)	1320
Eco130I	CCWWGG	2 cut(s)	319, 1645
Eco147I	AGGCCT	1 cut(s)	941
Eco31I	GGTCTC	2 cut(s)	419, 530
Eco32I	GATATC	1 cut(s)	2128
Eco47I	GGWCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
Eco81I	CCTNAGG	1 cut(s)	1116
Eco91I	GGTNACC	1 cut(s)	472
EcoO109I	RGGNCCY	1 cut(s)	2080
EcoO65I	GGTNACC	1 cut(s)	472
EcoRI	GAATTC	4 cut(s)	42, 190, 340, 1394
EcoRII	CCWGG	1 cut(s)	490
EcoRV	GATATC	1 cut(s)	2128
EcoT14I	CCWWGG	2 cut(s)	319, 1645
ErhI	CCWWGG	2 cut(s)	319, 1645
FaeI	CATG	7 cut(s)	334, 1244, 1504, 1631, 1649, 1879, 2136
FaqI	GGGAC	4 cut(s)	964, 1318, 1430, 1617
FatI	CATG	7 cut(s)	330, 1240, 1500, 1627, 1645, 1875, 2132
FblI	GTMKAC	1 cut(s)	1893
Fnu4HI	GCNGC	4 cut(s)	336, 485, 512, 2044
FokI	GGATG	3 cut(s)	1267, 1487, 1655
Fsp4HI	GCNGC	4 cut(s)	336, 485, 512, 2044
FspBI	CTAG	5 cut(s)	608, 1680, 1788, 2067, 2094
GlaI	GCGC	4 cut(s)	230, 378, 563, 573
GluI	GCNGC	4 cut(s)	336, 485, 512, 2044
GsaI	CCCAGC	3 cut(s)	544, 815, 966
HaeII	RGCGCY	2 cut(s)	232, 380
HaeIII	GGCC	3 cut(s)	399, 892, 941
HapII	CCGG	7 cut(s)	47, 469, 579, 651, 723, 1106, 1548
HgaI	GACGC	2 cut(s)	67, 439
HhaI	GCGC	4 cut(s)	231, 379, 564, 574
Hin1I	GRCGYC	1 cut(s)	450
Hin1II	CATG	7 cut(s)	334, 1244, 1504, 1631, 1649, 1879, 2136
Hin6I	GCGC	4 cut(s)	229, 377, 562, 572
HinP1I	GCGC	4 cut(s)	229, 377, 562, 572
HincII	GTYRAC	3 cut(s)	95, 604, 613
HindII	GTYRAC	3 cut(s)	95, 604, 613
HindIII	AAGCTT	3 cut(s)	878, 1481, 1513
HinfI	GANTC	6 cut(s)	461, 622, 784, 1555, 2073, 2119
HpaII	CCGG	7 cut(s)	47, 469, 579, 651, 723, 1106, 1548
HphI	GGTGA	8 cut(s)	146, 163, 466, 793, 1045, 1258, 2069, 2074
Hpy166II	GTNNAC	8 cut(s)	95, 568, 584, 604, 613, 1894, 1912, 1935
Hpy188I	TCNGA	8 cut(s)	346, 358, 383, 466, 530, 1387, 1705, 1746
Hpy8I	GTNNAC	8 cut(s)	95, 568, 584, 604, 613, 1894, 1912, 1935
Hpy99I	CGWCG	1 cut(s)	739
HpyCH4III	ACNGT	4 cut(s)	169, 309, 2026, 2090
HpyCH4IV	ACGT	3 cut(s)	417, 840, 1319
HpyCH4V	TGCA	9 cut(s)	634, 772, 945, 998, 1184, 1531, 1607, 1727, 2012
HpyF10VI	GCNNNNNNNGC	6 cut(s)	374, 456, 817, 989, 1111, 1724
HpySE526I	ACGT	3 cut(s)	417, 840, 1319
Hsp92I	GRCGYC	1 cut(s)	450
Hsp92II	CATG	7 cut(s)	334, 1244, 1504, 1631, 1649, 1879, 2136
HspAI	GCGC	4 cut(s)	229, 377, 562, 572
Kpn2I	TCCGGA	1 cut(s)	1547
KpnI	GGTACC	1 cut(s)	1972
Kzo9I	GATC	3 cut(s)	346, 1429, 1682
Lsp1109I	GCAGC	2 cut(s)	322, 523
LweI	GCATC	4 cut(s)	355, 1193, 1289, 2104
MaeI	CTAG	5 cut(s)	608, 1680, 1788, 2067, 2094
MaeII	ACGT	3 cut(s)	417, 840, 1319
MaeIII	GTNAC	8 cut(s)	144, 169, 303, 418, 472, 638, 1795, 2062
MalI	GATC	3 cut(s)	348, 1431, 1684
MboI	GATC	3 cut(s)	346, 1429, 1682
MfeI	CAATTG	1 cut(s)	993
MflI	RGATCY	1 cut(s)	1682
MhlI	GDGCHC	1 cut(s)	1771
MluI	ACGCGT	1 cut(s)	900
MlyI	GAGTC	2 cut(s)	470, 1549
MmeI	TCCRAC	3 cut(s)	381, 444, 1886
MroI	TCCGGA	1 cut(s)	1547
MroXI	GAANNNNTTC	1 cut(s)	1394
MseI	TTAA	7 cut(s)	26, 56, 536, 744, 849, 1656, 2099
MslI	CAYNNNNRTG	3 cut(s)	1505, 1626, 2017
MspA1I	CMGCKG	1 cut(s)	1286
MspI	CCGG	7 cut(s)	47, 469, 579, 651, 723, 1106, 1548
MspR9I	CCNGG	3 cut(s)	470, 492, 1107
MunI	CAATTG	1 cut(s)	993
Mva1269I	GAATGC	1 cut(s)	964
MvaI	CCWGG	1 cut(s)	492
MvnI	CGCG	3 cut(s)	564, 572, 902
MwoI	GCNNNNNNNGC	6 cut(s)	374, 456, 817, 989, 1111, 1724
NciI	CCSGG	2 cut(s)	470, 1107
NcoI	CCATGG	1 cut(s)	1645
NdeII	GATC	3 cut(s)	346, 1429, 1682
NlaIII	CATG	7 cut(s)	334, 1244, 1504, 1631, 1649, 1879, 2136
NlaIV	GGNNCC	6 cut(s)	870, 1446, 1537, 1546, 1633, 1970
NmeAIII	GCCGAG	1 cut(s)	426
NmuCI	GTSAC	5 cut(s)	144, 169, 418, 472, 2062
NspI	RCATGY	2 cut(s)	1244, 1504
NspV	TTCGAA	2 cut(s)	188, 875
PagI	TCATGA	2 cut(s)	1875, 2132
PceI	AGGCCT	1 cut(s)	941
PcsI	WCGNNNNNNNCGW	1 cut(s)	872
PctI	GAATGC	1 cut(s)	964
PdmI	GAANNNNTTC	1 cut(s)	1394
PfeI	GAWTC	4 cut(s)	622, 784, 2073, 2119
PflFI	GACNNNGTC	2 cut(s)	470, 599
PflMI	CCANNNNNTGG	1 cut(s)	827
PkrI	GCNGC	4 cut(s)	337, 486, 513, 2045
PleI	GAGTC	2 cut(s)	469, 1549
PpsI	GAGTC	2 cut(s)	469, 1549
Ppu21I	YACGTR	1 cut(s)	1320
PpuMI	RGGWCCY	1 cut(s)	2080
Psp1406I	AACGTT	1 cut(s)	840
Psp5II	RGGWCCY	1 cut(s)	2080
Psp6I	CCWGG	1 cut(s)	490
PspEI	GGTNACC	1 cut(s)	472
PspFI	CCCAGC	3 cut(s)	540, 811, 962
PspGI	CCWGG	1 cut(s)	490
PspN4I	GGNNCC	6 cut(s)	870, 1446, 1537, 1546, 1633, 1970
PspPI	GGNCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
PspPPI	RGGWCCY	1 cut(s)	2080
PsuI	RGATCY	1 cut(s)	1682
PsyI	GACNNNGTC	2 cut(s)	470, 599
RsaI	GTAC	7 cut(s)	403, 1090, 1168, 1293, 1322, 1970, 2023
RsaNI	GTAC	7 cut(s)	402, 1089, 1167, 1292, 1321, 1969, 2022
RseI	CAYNNNNRTG	3 cut(s)	1505, 1626, 2017
Rsr2I	CGGWCCG	1 cut(s)	466
RsrII	CGGWCCG	1 cut(s)	466
SaqAI	TTAA	7 cut(s)	26, 56, 536, 744, 849, 1656, 2099
SatI	GCNGC	4 cut(s)	336, 485, 512, 2044
Sau3AI	GATC	3 cut(s)	346, 1429, 1682
Sau96I	GGNCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
ScaI	AGTACT	1 cut(s)	1168
SchI	GAGTC	2 cut(s)	470, 1549
ScrFI	CCNGG	3 cut(s)	470, 492, 1107
SduI	GDGCHC	1 cut(s)	1771
SfaNI	GCATC	4 cut(s)	355, 1193, 1289, 2104
SfcI	CTRYAG	2 cut(s)	1465, 1590
SfuI	TTCGAA	2 cut(s)	188, 875
SinI	GGWCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
SmiMI	CAYNNNNRTG	3 cut(s)	1505, 1626, 2017
SmlI	CTYRAG	3 cut(s)	85, 617, 704
SmoI	CTYRAG	3 cut(s)	85, 617, 704
SnaBI	TACGTA	1 cut(s)	1320
SseBI	AGGCCT	1 cut(s)	941
SsiI	CCGC	5 cut(s)	387, 484, 1284, 1750, 2044
SspMI	CTAG	5 cut(s)	608, 1680, 1788, 2067, 2094
StuI	AGGCCT	1 cut(s)	941
StyD4I	CCNGG	3 cut(s)	468, 490, 1105
StyI	CCWWGG	2 cut(s)	319, 1645
TaaI	ACNGT	4 cut(s)	169, 309, 2026, 2090
TaiI	ACGT	3 cut(s)	420, 843, 1322
TaqI	TCGA	8 cut(s)	188, 234, 875, 1163, 1924, 1956, 2016, 2076
TatI	WGTACW	2 cut(s)	1166, 2021
TauI	GCSGC	2 cut(s)	487, 2046
TfiI	GAWTC	4 cut(s)	622, 784, 2073, 2119
Tru1I	TTAA	7 cut(s)	26, 56, 536, 744, 849, 1656, 2099
Tru9I	TTAA	7 cut(s)	26, 56, 536, 744, 849, 1656, 2099
TscAI	CASTG	3 cut(s)	1356, 1362, 1923
TseFI	GTSAC	5 cut(s)	144, 169, 418, 472, 2062
TseI	GCWGC	2 cut(s)	335, 511
Tsp45I	GTSAC	5 cut(s)	144, 169, 418, 472, 2062
TspDTI	ATGAA	5 cut(s)	296, 319, 1167, 1704, 1892
TspGWI	ACGGA	2 cut(s)	437, 1548
TspRI	CASTG	3 cut(s)	1356, 1362, 1923
Tth111I	GACNNNGTC	2 cut(s)	470, 599
Van91I	CCANNNNNTGG	1 cut(s)	827
VpaK11BI	GGWCC	6 cut(s)	466, 581, 653, 1444, 1631, 2080
XapI	RAATTY	9 cut(s)	42, 117, 184, 190, 340, 716, 913, 1394, 1438
XceI	RCATGY	2 cut(s)	1244, 1504
XmiI	GTMKAC	1 cut(s)	1893
XmnI	GAANNNNTTC	1 cut(s)	1394
XspI	CTAG	5 cut(s)	608, 1680, 1788, 2067, 2094
ZrmI	AGTACT	1 cut(s)	1168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.