Rorug03G0246000
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
23030638 .. 23037185
6548 bp
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UTR
Exon/CDS
Intron
Rorug03G0246000.1

Sequence Viewer

Length: 1599 bp
ATGGGGTTTTCGAGAGCTTTTGAGGAGGCAGAAGAAAGAGCAGGAGAGCAACCTCAATTGGAAACAAAGCTCGCTAGTTTCATGGCTTCCAGTCTTCAAGGAAATCAACTCAACCCGCAACAACAGCAACCACAACAACAACAACAAGAGCATCATCATCATCATCATCATCATCAAATACAAAACCATCATCATCATCAGCAGCAGCAACAGCAACAACAACAGCATCATCATGAAATTCAATACGGAATGATGCAGTCATCATCCTCCAACATCCCATCTGGGAACTTCATAGGAAGCAGCAAAGACAGTGGAGCATATGATCTGGGCGAGCTAGATCAAGCCCTTTTCCTCTACCTTGATGGACAACAGGATCATCATCATCATCATCAAGCTCCTCATCACGTTCAAGACCAACGACATCAAAATAGCTCAGGAATGAGGCCTCCAACTTTGAACATCTTTCCATCTGAGCCTATGCATGTAGAGCCATCATCAACCAAAGGTGTTAGTACTGCAGGAATAGTTTCTTCTGCAACGAGTGGTTCAAAGAGACCATCAGAGCCGTCCATGGAGTTGGCCAACCCACGCAAAATTGATGCTGCTGCTCCATCTGGACTTCCTGAACCGGCCAAGACTATCAAGCGTGAGGGTAACCGCAAGGGACCAACCACATCAAGTTCAGAGCAAGAAGGACCAAAAACACCAGACCCTAAGACACTGAGAAGGCTTGCTCAGAATAGAGAGGCAGCCAGGAAAAGCAGGCTCAGAAAAAAGGCATATGTTCAGCAGTTAGAGTCGAGTAGGATTAAGCTCACCCAGCTGGAACAAGAGCTGCAAAGAGCTAGAACCCAGGGCATGTTCTTTGGAGGTGGTCTTGTAGGAGCAGAACAAGGTGTTCCAGTTGGTATAAACAACATTAGCTCAGACGCTGCTGTTTTCGACATGGAGTATGCTCGTTGGCTTGAGGAGCACCACCGCCTGATGTGTGAGCTCCGAGCAGCTGTGCAAGAGCATTTGCCCGAGAATGAGCTGAGGCTGTTTGTGGACAACTGTTTGGCACACTATGATGAGGTGATGAACCTCAAGAGCATGGTGGCCAAAACCGATGTGTTTCACATTGTTTCAGGCATGTGGAAGACTCCAGCTGAAAGATGCTTCATGTGGATGGGTGGATTCCGGCCCTCTGAGGTCATTAAGATTATTGTGACACAAATCGAGCCACTGACGGAGCAGCAACTAATGGCTATTTGTTCGTTACAACAATCCACAAGTGAAGCTGAAGACGCTCTCACCCAAGGGCTTGAAGCTCTGAACCAGTCTCTCTCAGACACCATAGCTTCCGATTCACTGAGCATGCCCCCTAACATGGCTAACTACATGGGTCAGATGGCTTTAGCCATGAACAAGCTCTCTACTCTCGAAGGGTTCGTCAGACAGGCTGATAATCTGCGGCTGCAGACGATTCACCGGCTGCAAACACTCCTGACCACTCGCCAATCAGCACGGTGTTTGCTGGCAATCGCCGAGTACTTCCATCGCCTCCGTGCTCTCAGCTCTCTCTGGATGGGCCGTCCTAGACAAGATCATCAAGGCTAA

Protein Analysis

532

Amino Acids

59.92

Weight (kDa)

6.62

Isoelectric Point (pI)

64.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 236 - 280 2.2e-07 Basic region leucine zipper
bZIP_1 PF00170 239 - 279 3.9e-08 bZIP transcription factor
DOG1 PF14144 329 - 403 2.1e-32 Seed dormancy control
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 116, 658, 979, 1453
AclWI GGATC 1 cut(s) 381
AcoI YGGCCR 3 cut(s) 579, 630, 1098
AcsI RAATTY 1 cut(s) 237
AcuI CTGAAG 1 cut(s) 1302
AfaI GTAC 2 cut(s) 514, 1532
AfiI CCNNNNNNNGG 1 cut(s) 1369
AgsI TTSAA 6 cut(s) 98, 242, 410, 457, 549, 1307
AjnI CCWGG 2 cut(s) 752, 852
Alw21I GWGCWC 3 cut(s) 975, 996, 1552
Alw26I GTCTC 2 cut(s) 547, 1326
AlwI GGATC 1 cut(s) 381
AlwNI CAGNNNCTG 1 cut(s) 932
Ama87I CYCGRG 1 cut(s) 1022
AoxI GGCC 6 cut(s) 443, 579, 630, 1098, 1181, 1570
ApoI RAATTY 1 cut(s) 237
ArsI GACNNNNNNTTYG 2 cut(s) 1416, 1448
Asp700I GAANNNNTTC 1 cut(s) 526
AspS9I GGNCC 4 cut(s) 665, 695, 1182, 1570
AsuHPI GGTGA 4 cut(s) 808, 1087, 1285, 1460
AvaI CYCGRG 1 cut(s) 1022
AvaII GGWCC 2 cut(s) 665, 695
BalI TGGCCA 2 cut(s) 581, 1100
BanII GRGCYC 1 cut(s) 996
BbsI GAAGAC 3 cut(s) 86, 1145, 1290
Bbv12I GWGCWC 3 cut(s) 975, 996, 1552
BbvCI CCTCAGC 1 cut(s) 1034
BceAI ACGGC 2 cut(s) 550, 1557
BciT130I CCWGG 2 cut(s) 754, 854
BcoDI GTCTC 2 cut(s) 547, 1326
BfaI CTAG 4 cut(s) 75, 335, 846, 1578
BfmI CTRYAG 2 cut(s) 516, 1457
BmcAI AGTACT 2 cut(s) 514, 1532
Bme1390I CCNGG 2 cut(s) 754, 854
Bme18I GGWCC 2 cut(s) 665, 695
BmeT110I CYCGRG 1 cut(s) 1022
BmgT120I GGNCC 4 cut(s) 665, 695, 1182, 1570
BmiI GGNNCC 1 cut(s) 666
BmrFI CCNGG 2 cut(s) 754, 854
BmsI GCATC 5 cut(s) 160, 235, 243, 589, 1145
BpiI GAAGAC 3 cut(s) 86, 1145, 1290
BpmI CTGGAG 1 cut(s) 1128
Bpu10I CCTNAGC 2 cut(s) 433, 1034
BpuEI CTTGAG 2 cut(s) 986, 1070
BsaBI GATNNNNATC 1 cut(s) 378
BsaI GGTCTC 1 cut(s) 547
BsaJI CCNNGG 4 cut(s) 570, 852, 853, 1297
Bsc4I CCNNNNNNNGG 1 cut(s) 1369
Bse118I RCCGGY 2 cut(s) 628, 1470
Bse1I ACTGG 3 cut(s) 90, 902, 1318
Bse8I GATNNNNATC 1 cut(s) 378
BseBI CCWGG 2 cut(s) 754, 854
BseDI CCNNGG 4 cut(s) 570, 852, 853, 1297
BseGI GGATG 4 cut(s) 263, 273, 1173, 1572
BseJI GATNNNNATC 1 cut(s) 378
BseLI CCNNNNNNNGG 1 cut(s) 1369
BseNI ACTGG 3 cut(s) 90, 902, 1318
BseRI GAGGAG 3 cut(s) 38, 387, 983
BseYI CCCAGC 1 cut(s) 819
BshFI GGCC 6 cut(s) 445, 581, 632, 1100, 1183, 1572
BsiHKAI GWGCWC 3 cut(s) 975, 996, 1552
BsiHKCI CYCGRG 1 cut(s) 1022
BsiSI CCGG 3 cut(s) 629, 1180, 1471
BslFI GGGAC 1 cut(s) 678
BslI CCNNNNNNNGG 1 cut(s) 1369
BsmAI GTCTC 2 cut(s) 547, 1326
BsmFI GGGAC 1 cut(s) 678
BsnI GGCC 6 cut(s) 445, 581, 632, 1100, 1183, 1572
Bso31I GGTCTC 1 cut(s) 547
BsoBI CYCGRG 1 cut(s) 1022
Bsp1286I GDGCHC 3 cut(s) 975, 996, 1552
Bsp143I GATC 4 cut(s) 322, 337, 373, 1585
Bsp19I CCATGG 1 cut(s) 570
BspACI CCGC 4 cut(s) 116, 658, 979, 1453
BspANI GGCC 6 cut(s) 445, 581, 632, 1100, 1183, 1572
BspHI TCATGA 1 cut(s) 232
BspLI GGNNCC 1 cut(s) 666
BspMAI CTGCAG 2 cut(s) 520, 1461
BspPI GGATC 1 cut(s) 381
BspTNI GGTCTC 1 cut(s) 547
BsrFI RCCGGY 2 cut(s) 628, 1470
BsrI ACTGG 3 cut(s) 90, 902, 1318
BssAI RCCGGY 2 cut(s) 628, 1470
BssECI CCNNGG 4 cut(s) 570, 852, 853, 1297
BssMI GATC 4 cut(s) 322, 337, 373, 1585
BssT1I CCWWGG 2 cut(s) 570, 1297
Bst2UI CCWGG 2 cut(s) 754, 854
Bst4CI ACNGT 3 cut(s) 311, 1055, 1509
BstC8I GCNNGC 6 cut(s) 72, 332, 732, 764, 1358, 1518
BstDSI CCRYGG 1 cut(s) 570
BstEII GGTNACC 1 cut(s) 653
BstF5I GGATG 4 cut(s) 263, 273, 1173, 1572
BstKTI GATC 4 cut(s) 325, 340, 376, 1588
BstMAI GTCTC 2 cut(s) 547, 1326
BstMBI GATC 4 cut(s) 322, 337, 373, 1585
BstMWI GCNNNNNNNGC 6 cut(s) 124, 211, 487, 820, 970, 1286
BstNI CCWGG 2 cut(s) 754, 854
BstNSI RCATGY 4 cut(s) 485, 862, 1135, 1360
BstPI GGTNACC 1 cut(s) 653
BstSCI CCNGG 2 cut(s) 752, 852
BstSFI CTRYAG 2 cut(s) 516, 1457
BstV2I GAAGAC 3 cut(s) 86, 1145, 1290
BstXI CCANNNNNNTGG 1 cut(s) 577
BsuRI GGCC 6 cut(s) 445, 581, 632, 1100, 1183, 1572
BtgI CCRYGG 1 cut(s) 570
BtgZI GCGATG 1 cut(s) 1523
BtsCI GGATG 4 cut(s) 263, 273, 1173, 1572
BtsIMutI CAGTG 4 cut(s) 316, 719, 1223, 1349
Cac8I GCNNGC 6 cut(s) 72, 332, 732, 764, 1358, 1518
CaiI CAGNNNCTG 1 cut(s) 932
CciI TCATGA 1 cut(s) 232
Cfr10I RCCGGY 2 cut(s) 628, 1470
Cfr13I GGNCC 4 cut(s) 665, 695, 1182, 1570
CseI GACGC 2 cut(s) 938, 1295
Csp6I GTAC 2 cut(s) 513, 1531
CspCI CAANNNNNGTGG 2 cut(s) 292, 327
CviQI GTAC 2 cut(s) 513, 1531
DpnI GATC 4 cut(s) 324, 339, 375, 1587
DpnII GATC 4 cut(s) 322, 337, 373, 1585
EaeI YGGCCR 3 cut(s) 579, 630, 1098
Ecl136II GAGCTC 1 cut(s) 994
Eco130I CCWWGG 2 cut(s) 570, 1297
Eco147I AGGCCT 1 cut(s) 445
Eco24I GRGCYC 1 cut(s) 996
Eco31I GGTCTC 1 cut(s) 547
Eco47I GGWCC 2 cut(s) 665, 695
Eco53kI GAGCTC 1 cut(s) 994
Eco57I CTGAAG 1 cut(s) 1302
Eco88I CYCGRG 1 cut(s) 1022
Eco91I GGTNACC 1 cut(s) 653
EcoICRI GAGCTC 1 cut(s) 994
EcoO65I GGTNACC 1 cut(s) 653
EcoRII CCWGG 2 cut(s) 752, 852
EcoT14I CCWWGG 2 cut(s) 570, 1297
EcoT22I ATGCAT 1 cut(s) 483
EcoT38I GRGCYC 1 cut(s) 996
ErhI CCWWGG 2 cut(s) 570, 1297
FaqI GGGAC 1 cut(s) 678
FauI CCCGC 1 cut(s) 123
FauNDI CATATG 2 cut(s) 319, 781
FokI GGATG 4 cut(s) 250, 260, 1180, 1579
FriOI GRGCYC 1 cut(s) 996
FspBI CTAG 4 cut(s) 75, 335, 846, 1578
GsaI CCCAGC 1 cut(s) 823
GsuI CTGGAG 1 cut(s) 1128
HaeIII GGCC 6 cut(s) 445, 581, 632, 1100, 1183, 1572
HapII CCGG 3 cut(s) 629, 1180, 1471
HgaI GACGC 2 cut(s) 938, 1295
HinfI GANTC 5 cut(s) 797, 1141, 1176, 1346, 1465
HpaII CCGG 3 cut(s) 629, 1180, 1471
HphI GGTGA 4 cut(s) 808, 1087, 1285, 1460
Hpy166II GTNNAC 1 cut(s) 1048
Hpy8I GTNNAC 1 cut(s) 1048
HpyAV CCTTC 3 cut(s) 686, 720, 1418
HpyCH4III ACNGT 3 cut(s) 311, 1055, 1509
HpyCH4IV ACGT 1 cut(s) 405
HpyCH4V TGCA 8 cut(s) 256, 481, 518, 536, 838, 1009, 1459, 1477
HpyF10VI GCNNNNNNNGC 6 cut(s) 124, 211, 487, 820, 970, 1286
HpySE526I ACGT 1 cut(s) 405
Kzo9I GATC 4 cut(s) 322, 337, 373, 1585
LmnI GCTCC 7 cut(s) 314, 400, 613, 884, 970, 999, 1231
LweI GCATC 5 cut(s) 160, 235, 243, 589, 1145
MaeI CTAG 4 cut(s) 75, 335, 846, 1578
MaeII ACGT 1 cut(s) 405
MaeIII GTNAC 3 cut(s) 653, 1207, 1257
MalI GATC 4 cut(s) 324, 339, 375, 1587
MboI GATC 4 cut(s) 322, 337, 373, 1585
MboII GAAGA 5 cut(s) 44, 86, 522, 1150, 1295
MfeI CAATTG 1 cut(s) 56
MhlI GDGCHC 3 cut(s) 975, 996, 1552
MlsI TGGCCA 2 cut(s) 581, 1100
MluCI AATT 3 cut(s) 56, 237, 594
MluNI TGGCCA 2 cut(s) 581, 1100
MlyI GAGTC 2 cut(s) 806, 1135
MmeI TCCRAC 2 cut(s) 294, 473
Mox20I TGGCCA 2 cut(s) 581, 1100
Mph1103I ATGCAT 1 cut(s) 483
MroXI GAANNNNTTC 1 cut(s) 526
MscI TGGCCA 2 cut(s) 581, 1100
MseI TTAA 2 cut(s) 810, 1197
MslI CAYNNNNRTG 3 cut(s) 231, 1068, 1166
Msp20I TGGCCA 2 cut(s) 581, 1100
MspA1I CMGCKG 3 cut(s) 823, 1004, 1148
MspI CCGG 3 cut(s) 629, 1180, 1471
MspR9I CCNGG 2 cut(s) 754, 854
MunI CAATTG 1 cut(s) 56
MvaI CCWGG 2 cut(s) 754, 854
MwoI GCNNNNNNNGC 6 cut(s) 124, 211, 487, 820, 970, 1286
NcoI CCATGG 1 cut(s) 570
NdeI CATATG 2 cut(s) 319, 781
NdeII GATC 4 cut(s) 322, 337, 373, 1585
NlaIV GGNNCC 1 cut(s) 666
NmeAIII GCCGAG 1 cut(s) 1552
NmuCI GTSAC 1 cut(s) 1207
NsiI ATGCAT 1 cut(s) 483
NspI RCATGY 4 cut(s) 485, 862, 1135, 1360
PaeI GCATGC 1 cut(s) 1360
PagI TCATGA 1 cut(s) 232
PasI CCCWGGG 1 cut(s) 853
PceI AGGCCT 1 cut(s) 445
PcsI WCGNNNNNNNCGW 1 cut(s) 1428
PdmI GAANNNNTTC 1 cut(s) 526
PfeI GAWTC 3 cut(s) 1176, 1346, 1465
PleI GAGTC 2 cut(s) 805, 1135
PpsI GAGTC 2 cut(s) 805, 1135
Psp124BI GAGCTC 1 cut(s) 996
Psp6I CCWGG 2 cut(s) 752, 852
PspEI GGTNACC 1 cut(s) 653
PspFI CCCAGC 1 cut(s) 819
PspGI CCWGG 2 cut(s) 752, 852
PspN4I GGNNCC 1 cut(s) 666
PspPI GGNCC 4 cut(s) 665, 695, 1182, 1570
PstI CTGCAG 2 cut(s) 520, 1461
PstNI CAGNNNCTG 1 cut(s) 932
PvuII CAGCTG 3 cut(s) 823, 1004, 1148
RsaI GTAC 2 cut(s) 514, 1532
RsaNI GTAC 2 cut(s) 513, 1531
RseI CAYNNNNRTG 3 cut(s) 231, 1068, 1166
SacI GAGCTC 1 cut(s) 996
SaqAI TTAA 2 cut(s) 810, 1197
Sau3AI GATC 4 cut(s) 322, 337, 373, 1585
Sau96I GGNCC 4 cut(s) 665, 695, 1182, 1570
ScaI AGTACT 2 cut(s) 514, 1532
SchI GAGTC 2 cut(s) 806, 1135
ScrFI CCNGG 2 cut(s) 754, 854
SduI GDGCHC 3 cut(s) 975, 996, 1552
SfaNI GCATC 5 cut(s) 160, 235, 243, 589, 1145
SfcI CTRYAG 2 cut(s) 516, 1457
SinI GGWCC 2 cut(s) 665, 695
SmiMI CAYNNNNRTG 3 cut(s) 231, 1068, 1166
SmlI CTYRAG 2 cut(s) 965, 1085
SmoI CTYRAG 2 cut(s) 965, 1085
SphI GCATGC 1 cut(s) 1360
Sse9I AATT 3 cut(s) 56, 237, 594
SseBI AGGCCT 1 cut(s) 445
SsiI CCGC 4 cut(s) 116, 658, 979, 1453
SspMI CTAG 4 cut(s) 75, 335, 846, 1578
SstI GAGCTC 1 cut(s) 996
StuI AGGCCT 1 cut(s) 445
StyD4I CCNGG 2 cut(s) 752, 852
StyI CCWWGG 2 cut(s) 570, 1297
TaaI ACNGT 3 cut(s) 311, 1055, 1509
TaiI ACGT 1 cut(s) 408
TaqI TCGA 5 cut(s) 11, 800, 942, 1218, 1422
TasI AATT 3 cut(s) 56, 237, 594
TatI WGTACW 2 cut(s) 512, 1530
TauI GCSGC 1 cut(s) 1456
TfiI GAWTC 3 cut(s) 1176, 1346, 1465
Tru1I TTAA 2 cut(s) 810, 1197
Tru9I TTAA 2 cut(s) 810, 1197
TscAI CASTG 4 cut(s) 316, 726, 1230, 1356
TseFI GTSAC 1 cut(s) 1207
Tsp45I GTSAC 1 cut(s) 1207
TspDTI ATGAA 6 cut(s) 70, 249, 280, 1094, 1150, 1418
TspGWI ACGGA 3 cut(s) 261, 1244, 1535
TspRI CASTG 4 cut(s) 316, 726, 1230, 1356
VpaK11BI GGWCC 2 cut(s) 665, 695
XapI RAATTY 1 cut(s) 237
XceI RCATGY 4 cut(s) 485, 862, 1135, 1360
XmnI GAANNNNTTC 1 cut(s) 526
XspI CTAG 4 cut(s) 75, 335, 846, 1578
ZrmI AGTACT 2 cut(s) 514, 1532
Zsp2I ATGCAT 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.