pycom06g20550
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
23520701 .. 23522484
1784 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g20550.1

Sequence Viewer

Length: 1152 bp
ATGCTTTTGATCCTTTTCTGCCGAAAGAAGAAGAGCAAGAAGACGAGCTCCGTCGACATTGCCACCGTGAAGCACCGGGAAGTCGAGATTCCTGGCGAGAAGCTGCCTGCGGAGGCTGAGAATGGAGGATATGGAAATGGGCATTCGGTGGCGGATGCTGCCTCCGCGGCGATGGTGGGGAATGGCAAAAGTGAAGCCGGTGGCGCTAGTGGTGCTAAAAAGCTGGCGTTTTTTGGCAATGCGGCGAGGGTGTTTGATCTGGAGGACCTGTTGAGAGCTTCGGCGGAGGTTTTGGGGAAGGGGACTTTCGGGACAGCGTACAAAGCGGTTCTGGAGGCTGGGACTGTGGTGGCTGTGAAGAGGCTGAAAGACGTGACGATTTCGGAGAGCGAGTTTAAGGAAAAGATTGAGGCTGTGGGAGCGAAGGATCATGAGAATTTGGTGCCTCTGAGGGCATATTATTTCAGCAGAGATGAGAAGCTTCTTGTCTATGATTACATGCCTATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGCAGGTAGGACTCCATTGAATTGGGAAATCAGGTCCGGCATTGCCCTTGGAGCTGCCCGTGGAATTGAATACCTACACTCTCAAGGTCATACTGTCTCCCACGGAAACATAAAGTCTTCCAACATCCTGCTCACAAAGTCCTATGAAGCTCGGGTTTCTGATTTTGGCCTAGCGCACCTTGTTGGCCCCTCATCCACTCCCAACCGAGTTGCTGGCTACCGGGCACCGGAGGTTACTGATCCTCGCAAGGTATCCCAAAAGGCCGATGTTTATAGCTTTGGGGTGTTGCTCCTGGAGCTACTCACCGGGAAGCCCCCAACGCATGCCCTCTTGAATGAGGAAGGAGTTGACCTCCCAAGATGGGTTCAGTCCATAGTCAAAGAGGAGTGGACTTCAGAGGTTTTCGATCTTGAGCTCCTCAGGTACCAGAATGTAGAGGAGGAGATGGTTCAGCTCTTGCAACTTGCAATAGATTGTTCAGCCCAGTACCCTGACAAACGCCCTTCAATCTCCGAAGTGACAAGGCGCATTGAGGAGCTACGTCGTTCTAGCTTGCAAGATGAGCAGCCCGAGGTTGTCCATGATTTAGACGATGTGTCTTCTCGATGA

Protein Analysis

384

Amino Acids

41.89

Weight (kDa)

6.11

Isoelectric Point (pI)

39.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 96 - 355 8e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 96 - 357 9.3e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 536
Acc65I GGTACC 1 cut(s) 966
AccB1I GGYRCC 3 cut(s) 442, 766, 966
AccI GTMKAC 1 cut(s) 54
AccII CGCG 1 cut(s) 167
AciI CCGC 7 cut(s) 110, 152, 165, 167, 242, 284, 326
AclWI GGATC 3 cut(s) 4, 435, 776
AcsI RAATTY 1 cut(s) 436
AcuI CTGAAG 1 cut(s) 921
AfaI GTAC 3 cut(s) 320, 968, 1031
AfiI CCNNNNNNNGG 2 cut(s) 769, 904
AgsI TTSAA 4 cut(s) 562, 611, 877, 1050
AhdI GACNNNNNGTC 1 cut(s) 1138
AjiI CACGTC 1 cut(s) 373
AjnI CCWGG 2 cut(s) 91, 834
Alw21I GWGCWC 2 cut(s) 50, 960
Alw26I GTCTC 1 cut(s) 643
AlwI GGATC 3 cut(s) 4, 435, 776
Ama87I CYCGRG 2 cut(s) 693, 1112
AoxI GGCC 3 cut(s) 709, 727, 804
ApeKI GCWGC 4 cut(s) 103, 158, 596, 1108
ApoI RAATTY 1 cut(s) 436
Asp718I GGTACC 1 cut(s) 966
AspLEI GCGC 3 cut(s) 206, 718, 1071
AspS9I GGNCC 3 cut(s) 265, 576, 728
AsuC2I CCSGG 3 cut(s) 77, 764, 850
AsuHPI GGTGA 1 cut(s) 838
AvaI CYCGRG 2 cut(s) 693, 1112
AvaII GGWCC 2 cut(s) 265, 576
AxyI CCTNAGG 1 cut(s) 962
BaeGI GKGCMC 1 cut(s) 769
BanI GGYRCC 3 cut(s) 442, 766, 966
BanII GRGCYC 2 cut(s) 50, 960
BbsI GAAGAC 3 cut(s) 47, 651, 1134
Bbv12I GWGCWC 2 cut(s) 50, 960
BbvI GCAGC 4 cut(s) 90, 145, 583, 1120
BccI CCATC 3 cut(s) 166, 897, 982
BciT130I CCWGG 2 cut(s) 93, 836
BciVI GTATCC 1 cut(s) 805
BcnI CCSGG 3 cut(s) 77, 764, 850
BcoDI GTCTC 1 cut(s) 643
BfaI CTAG 3 cut(s) 207, 713, 1092
BfoI RGCGCY 1 cut(s) 207
BfuAI ACCTGC 1 cut(s) 536
BfuI GTATCC 1 cut(s) 805
BglI GCCNNNNNGGC 1 cut(s) 167
BisI GCNGC 6 cut(s) 104, 159, 168, 243, 597, 1109
BlsI GCNGC 6 cut(s) 105, 160, 169, 244, 598, 1110
Bme1390I CCNGG 5 cut(s) 77, 93, 764, 836, 850
Bme18I GGWCC 2 cut(s) 265, 576
BmeRI GACNNNNNGTC 1 cut(s) 1138
BmeT110I CYCGRG 2 cut(s) 693, 1112
BmgBI CACGTC 1 cut(s) 373
BmgT120I GGNCC 3 cut(s) 265, 576, 728
BmiI GGNNCC 4 cut(s) 444, 730, 768, 968
BmrFI CCNGG 5 cut(s) 77, 93, 764, 836, 850
BmrI ACTGGG 1 cut(s) 1021
BmsI GCATC 1 cut(s) 145
BmuI ACTGGG 1 cut(s) 1021
BpiI GAAGAC 3 cut(s) 47, 651, 1134
BplI GAGNNNNNCTC 2 cut(s) 879, 911
BpmI CTGGAG 3 cut(s) 281, 353, 857
BpuEI CTTGAG 2 cut(s) 609, 974
BpuMI CCSGG 3 cut(s) 77, 764, 850
BsaJI CCNNGG 5 cut(s) 165, 589, 601, 643, 1113
BsaWI WCCGGW 1 cut(s) 769
BsaXI ACNNNNNCTCC 4 cut(s) 254, 284, 377, 407
Bsc4I CCNNNNNNNGG 2 cut(s) 769, 904
Bse118I RCCGGY 1 cut(s) 197
Bse1I ACTGG 1 cut(s) 1027
Bse21I CCTNAGG 1 cut(s) 962
Bse3DI GCAATG 3 cut(s) 57, 244, 582
BseBI CCWGG 2 cut(s) 93, 836
BseDI CCNNGG 5 cut(s) 165, 589, 601, 643, 1113
BseGI GGATG 3 cut(s) 160, 666, 734
BseLI CCNNNNNNNGG 2 cut(s) 769, 904
BseMI GCAATG 3 cut(s) 57, 244, 582
BseMII CTCAG 3 cut(s) 108, 440, 976
BseNI ACTGG 1 cut(s) 1027
BseRI GAGGAG 5 cut(s) 941, 950, 995, 998, 1091
BseSI GKGCMC 1 cut(s) 769
BseXI GCAGC 4 cut(s) 90, 145, 583, 1120
BseYI CCCAGC 1 cut(s) 338
BsgI GTGCAG 1 cut(s) 504
Bsh1236I CGCG 1 cut(s) 167
BshFI GGCC 3 cut(s) 711, 729, 806
BshNI GGYRCC 3 cut(s) 442, 766, 966
BsiHKAI GWGCWC 2 cut(s) 50, 960
BsiHKCI CYCGRG 2 cut(s) 693, 1112
BsiSI CCGG 6 cut(s) 76, 198, 579, 763, 770, 849
BslFI GGGAC 3 cut(s) 316, 325, 355
BslI CCNNNNNNNGG 2 cut(s) 769, 904
BsmAI GTCTC 1 cut(s) 643
BsmFI GGGAC 3 cut(s) 316, 325, 355
BsmI GAATGC 1 cut(s) 142
BsnI GGCC 3 cut(s) 711, 729, 806
BsoBI CYCGRG 2 cut(s) 693, 1112
Bsp1286I GDGCHC 3 cut(s) 50, 769, 960
Bsp143I GATC 5 cut(s) 9, 256, 427, 781, 949
BspACI CCGC 7 cut(s) 110, 152, 165, 167, 242, 284, 326
BspANI GGCC 3 cut(s) 711, 729, 806
BspCNI CTCAG 3 cut(s) 109, 441, 975
BspFNI CGCG 1 cut(s) 167
BspHI TCATGA 1 cut(s) 430
BspLI GGNNCC 4 cut(s) 444, 730, 768, 968
BspMI ACCTGC 1 cut(s) 536
BspPI GGATC 3 cut(s) 4, 435, 776
BspQI GCTCTTC 1 cut(s) 26
BspT107I GGYRCC 3 cut(s) 442, 766, 966
BsrDI GCAATG 3 cut(s) 57, 244, 582
BsrFI RCCGGY 1 cut(s) 197
BsrI ACTGG 1 cut(s) 1027
BssAI RCCGGY 1 cut(s) 197
BssECI CCNNGG 5 cut(s) 165, 589, 601, 643, 1113
BssMI GATC 5 cut(s) 9, 256, 427, 781, 949
BssT1I CCWWGG 1 cut(s) 589
Bst2UI CCWGG 2 cut(s) 93, 836
Bst4CI ACNGT 3 cut(s) 67, 346, 637
Bst6I CTCTTC 2 cut(s) 26, 353
BstC8I GCNNGC 5 cut(s) 108, 225, 757, 867, 1097
BstDEI CTNAG 3 cut(s) 117, 449, 962
BstDSI CCRYGG 3 cut(s) 165, 601, 643
BstF5I GGATG 3 cut(s) 160, 666, 734
BstFNI CGCG 1 cut(s) 167
BstH2I RGCGCY 1 cut(s) 207
BstHHI GCGC 3 cut(s) 206, 718, 1071
BstKTI GATC 5 cut(s) 12, 259, 430, 784, 952
BstMAI GTCTC 1 cut(s) 643
BstMBI GATC 5 cut(s) 9, 256, 427, 781, 949
BstNI CCWGG 2 cut(s) 93, 836
BstNSI RCATGY 2 cut(s) 502, 869
BstSCI CCNGG 5 cut(s) 75, 91, 762, 834, 848
BstSLI GKGCMC 1 cut(s) 769
BstUI CGCG 1 cut(s) 167
BstV1I GCAGC 4 cut(s) 90, 145, 583, 1120
BstV2I GAAGAC 3 cut(s) 47, 651, 1134
BstXI CCANNNNNNTGG 1 cut(s) 564
Bsu36I CCTNAGG 1 cut(s) 962
BsuI GTATCC 1 cut(s) 805
BsuRI GGCC 3 cut(s) 711, 729, 806
BtgI CCRYGG 3 cut(s) 165, 601, 643
BtgZI GCGATG 1 cut(s) 185
BtrI CACGTC 1 cut(s) 373
BtsCI GGATG 3 cut(s) 160, 666, 734
BveI ACCTGC 1 cut(s) 536
Cac8I GCNNGC 5 cut(s) 108, 225, 757, 867, 1097
CciI TCATGA 1 cut(s) 430
CfoI GCGC 3 cut(s) 206, 718, 1071
Cfr10I RCCGGY 1 cut(s) 197
Cfr13I GGNCC 3 cut(s) 265, 576, 728
Cfr42I CCGCGG 1 cut(s) 168
Csp6I GTAC 3 cut(s) 319, 967, 1030
CviAII CATG 5 cut(s) 431, 499, 530, 866, 1124
CviQI GTAC 3 cut(s) 319, 967, 1030
DdeI CTNAG 3 cut(s) 117, 449, 962
DpnI GATC 5 cut(s) 11, 258, 429, 783, 951
DpnII GATC 5 cut(s) 9, 256, 427, 781, 949
DriI GACNNNNNGTC 1 cut(s) 1138
Eam1104I CTCTTC 2 cut(s) 26, 353
Eam1105I GACNNNNNGTC 1 cut(s) 1138
EarI CTCTTC 2 cut(s) 26, 353
EciI GGCGGA 2 cut(s) 167, 299
Ecl136II GAGCTC 2 cut(s) 48, 958
Eco130I CCWWGG 1 cut(s) 589
Eco24I GRGCYC 2 cut(s) 50, 960
Eco47I GGWCC 2 cut(s) 265, 576
Eco53kI GAGCTC 2 cut(s) 48, 958
Eco57I CTGAAG 1 cut(s) 921
Eco81I CCTNAGG 1 cut(s) 962
Eco88I CYCGRG 2 cut(s) 693, 1112
EcoICRI GAGCTC 2 cut(s) 48, 958
EcoO109I RGGNCCY 1 cut(s) 265
EcoRII CCWGG 2 cut(s) 91, 834
EcoT14I CCWWGG 1 cut(s) 589
EcoT38I GRGCYC 2 cut(s) 50, 960
ErhI CCWWGG 1 cut(s) 589
FaeI CATG 5 cut(s) 434, 502, 533, 869, 1127
FaqI GGGAC 3 cut(s) 316, 325, 355
FatI CATG 5 cut(s) 430, 498, 529, 865, 1123
FblI GTMKAC 1 cut(s) 54
Fnu4HI GCNGC 6 cut(s) 104, 159, 168, 243, 597, 1109
FokI GGATG 3 cut(s) 167, 653, 721
FriOI GRGCYC 2 cut(s) 50, 960
Fsp4HI GCNGC 6 cut(s) 104, 159, 168, 243, 597, 1109
FspBI CTAG 3 cut(s) 207, 713, 1092
GlaI GCGC 3 cut(s) 205, 717, 1070
GluI GCNGC 6 cut(s) 104, 159, 168, 243, 597, 1109
GsaI CCCAGC 1 cut(s) 342
GsuI CTGGAG 3 cut(s) 281, 353, 857
HaeII RGCGCY 1 cut(s) 207
HaeIII GGCC 3 cut(s) 711, 729, 806
HapII CCGG 6 cut(s) 76, 198, 579, 763, 770, 849
HhaI GCGC 3 cut(s) 206, 718, 1071
Hin1II CATG 5 cut(s) 434, 502, 533, 869, 1127
Hin6I GCGC 3 cut(s) 204, 716, 1069
HinP1I GCGC 3 cut(s) 204, 716, 1069
HincII GTYRAC 2 cut(s) 55, 892
HindII GTYRAC 2 cut(s) 55, 892
HindIII AAGCTT 2 cut(s) 479, 511
HinfI GANTC 2 cut(s) 88, 553
HpaII CCGG 6 cut(s) 76, 198, 579, 763, 770, 849
HphI GGTGA 1 cut(s) 838
Hpy166II GTNNAC 3 cut(s) 55, 892, 933
Hpy188I TCNGA 5 cut(s) 385, 450, 703, 940, 1057
Hpy188III TCNNGA 8 cut(s) 85, 260, 310, 332, 431, 874, 953, 1146
Hpy8I GTNNAC 3 cut(s) 55, 892, 933
Hpy99I CGWCG 2 cut(s) 56, 1089
HpyAV CCTTC 4 cut(s) 292, 418, 878, 1056
HpyCH4III ACNGT 3 cut(s) 67, 346, 637
HpyCH4IV ACGT 2 cut(s) 372, 1084
HpyCH4V TGCA 5 cut(s) 521, 529, 1003, 1010, 1099
HpyF3I CTNAG 3 cut(s) 117, 449, 962
HpySE526I ACGT 2 cut(s) 372, 1084
Hsp92II CATG 5 cut(s) 434, 502, 533, 869, 1127
HspAI GCGC 3 cut(s) 204, 716, 1069
KpnI GGTACC 1 cut(s) 970
KspI CCGCGG 1 cut(s) 168
Kzo9I GATC 5 cut(s) 9, 256, 427, 781, 949
LguI GCTCTTC 1 cut(s) 26
LmnI GCTCC 8 cut(s) 53, 419, 542, 593, 837, 838, 963, 1078
Lsp1109I GCAGC 4 cut(s) 90, 145, 583, 1120
LweI GCATC 1 cut(s) 145
MaeI CTAG 3 cut(s) 207, 713, 1092
MaeII ACGT 2 cut(s) 372, 1084
MaeIII GTNAC 3 cut(s) 373, 775, 1060
MalI GATC 5 cut(s) 11, 258, 429, 783, 951
MboI GATC 5 cut(s) 9, 256, 427, 781, 949
MboII GAAGA 6 cut(s) 40, 43, 52, 370, 651, 1134
MhlI GDGCHC 3 cut(s) 50, 769, 960
MluCI AATT 3 cut(s) 436, 562, 606
MlyI GAGTC 1 cut(s) 547
MmeI TCCRAC 1 cut(s) 687
MseI TTAA 1 cut(s) 396
MslI CAYNNNNRTG 1 cut(s) 503
MspA1I CMGCKG 1 cut(s) 167
MspI CCGG 6 cut(s) 76, 198, 579, 763, 770, 849
MspR9I CCNGG 5 cut(s) 77, 93, 764, 836, 850
Mva1269I GAATGC 1 cut(s) 142
MvaI CCWGG 2 cut(s) 93, 836
MvnI CGCG 1 cut(s) 167
NciI CCSGG 3 cut(s) 77, 764, 850
NdeII GATC 5 cut(s) 9, 256, 427, 781, 949
NlaIII CATG 5 cut(s) 434, 502, 533, 869, 1127
NlaIV GGNNCC 4 cut(s) 444, 730, 768, 968
NmuCI GTSAC 2 cut(s) 373, 1060
NspI RCATGY 2 cut(s) 502, 869
PaeI GCATGC 1 cut(s) 869
PagI TCATGA 1 cut(s) 430
PciSI GCTCTTC 1 cut(s) 26
PctI GAATGC 1 cut(s) 142
PfeI GAWTC 1 cut(s) 88
PfoI TCCNGGA 1 cut(s) 834
PkrI GCNGC 6 cut(s) 105, 160, 169, 244, 598, 1110
PleI GAGTC 1 cut(s) 547
PpsI GAGTC 1 cut(s) 547
PpuMI RGGWCCY 1 cut(s) 265
Psp124BI GAGCTC 2 cut(s) 50, 960
Psp5II RGGWCCY 1 cut(s) 265
Psp6I CCWGG 2 cut(s) 91, 834
PspFI CCCAGC 1 cut(s) 338
PspGI CCWGG 2 cut(s) 91, 834
PspN4I GGNNCC 4 cut(s) 444, 730, 768, 968
PspPI GGNCC 3 cut(s) 265, 576, 728
PspPPI RGGWCCY 1 cut(s) 265
RsaI GTAC 3 cut(s) 320, 968, 1031
RsaNI GTAC 3 cut(s) 319, 967, 1030
RseI CAYNNNNRTG 1 cut(s) 503
SacI GAGCTC 2 cut(s) 50, 960
SacII CCGCGG 1 cut(s) 168
SalI GTCGAC 1 cut(s) 53
SapI GCTCTTC 1 cut(s) 26
SaqAI TTAA 1 cut(s) 396
SatI GCNGC 6 cut(s) 104, 159, 168, 243, 597, 1109
Sau3AI GATC 5 cut(s) 9, 256, 427, 781, 949
Sau96I GGNCC 3 cut(s) 265, 576, 728
SchI GAGTC 1 cut(s) 547
ScrFI CCNGG 5 cut(s) 77, 93, 764, 836, 850
SduI GDGCHC 3 cut(s) 50, 769, 960
SfaNI GCATC 1 cut(s) 145
Sfr303I CCGCGG 1 cut(s) 168
SgrBI CCGCGG 1 cut(s) 168
SinI GGWCC 2 cut(s) 265, 576
SmiMI CAYNNNNRTG 1 cut(s) 503
SmlI CTYRAG 2 cut(s) 624, 953
SmoI CTYRAG 2 cut(s) 624, 953
SphI GCATGC 1 cut(s) 869
Sse9I AATT 3 cut(s) 436, 562, 606
SsiI CCGC 7 cut(s) 110, 152, 165, 167, 242, 284, 326
SspMI CTAG 3 cut(s) 207, 713, 1092
SstI GAGCTC 2 cut(s) 50, 960
StyD4I CCNGG 5 cut(s) 75, 91, 762, 834, 848
StyI CCWWGG 1 cut(s) 589
TaaI ACNGT 3 cut(s) 67, 346, 637
TaiI ACGT 2 cut(s) 375, 1087
TaqI TCGA 4 cut(s) 54, 84, 948, 1147
TasI AATT 3 cut(s) 436, 562, 606
TauI GCSGC 2 cut(s) 170, 245
TfiI GAWTC 1 cut(s) 88
Tru1I TTAA 1 cut(s) 396
Tru9I TTAA 1 cut(s) 396
TseFI GTSAC 2 cut(s) 373, 1060
TseI GCWGC 4 cut(s) 103, 158, 596, 1108
Tsp45I GTSAC 2 cut(s) 373, 1060
TspDTI ATGAA 1 cut(s) 702
TspGWI ACGGA 2 cut(s) 40, 660
VpaK11BI GGWCC 2 cut(s) 265, 576
XapI RAATTY 1 cut(s) 436
XceI RCATGY 2 cut(s) 502, 869
XmiI GTMKAC 1 cut(s) 54
XspI CTAG 3 cut(s) 207, 713, 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.