Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002683

Physical Location & Seq

Genomic Coordinates Reverse (-)

35537205 .. 35540692

Gene Structure 3488 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G026140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGAAGCCTCCAAAACCGGCCTTCACGACCACTGTCTTGGTGGTGGTGTTGTGTACTTGTCTCAGCTTGGCCGCCAGCTACGATCTGGCTTCCGACAGACAGGCTCTGTTGAGTTTCCGAGCTAGCGTTGGAGGCCGCTCGACGTTTTGGAATGTGATGGAGACCAACCCGTGTTCCTGGACTGGTGTGACGTGCGTGTCGGACCGAGTCACTGAGTTACGCGTTCCCGGTTGGGGACTCCATGGCCCGCTGCCTCTCGGTCTCGGCAACTTGACCAAACTCCAAGCCCTGTCTCTCCGCAAAAACGCGCTTTACGGCCCGATACCTCCCGACTTTGTTAACCTCGTCAATCTGCAGAACCTCTACTTGACAGCTAACAGGTTTTCGGGTCCAATTCCTGACTTTATCTTCGGTTTGCAGAGCCTGGAGAGGTTGGATGTCTCTCAGAATAAGTTTTCCGGTGAAATTTCGACCGGGTTTAATAATTTGACGAAGTTGGTGTCCCTGCATTTGGAGGAGAACCAGCTTAATGGGTCAATCCCGGAGTTGGATATGCCCGCTCTTGGACAGTTCAATGTATCTTATAACCGGCTAAACGGGTCGGTACCCGCAAAGCTTTCCCGCTGGCCGGTGGGTGCCTTTGCAGGGAACTTGCAGCTGTGCGGGAAGCCGATGACGGCCTGTAATGGGACTGAGATTGGGAGTGGGAGTGGGAGTGGGAGTAAGAAGAAGTTGTCAGGTGGAGCAATTGCAGGGATCGTGATAGGTTGCGTAATTGGATTTTTCATCATTGTTGCCATTTTGTACTTTTTGTGTGGAAGAAAGAAAAATGGGGAAAAGGGTGCTAATTATGTTGCGCCGCGGAGTGTTCCCGCGGTTGAAGTCGCAAAGAGATCATTGGATACCGAGAGTTCGAATGCTGATTACTCTTCTGGCCAAAAAAGGAGTGTGAGTAGTAAGAACTTGGTGTTTTTTGGGAATGCGGTGAAGGTGTTTGATTTGGAGGATTTGTTGAGGGCATCGGCTGAGGTACTTGGGAAGGGGACTTTTGGGACGGCGTATAAGGCGGCTTTGGAAATGGGGGTGTCCATGGCAGTGAAGAGGTTGAAGGAAGTGACTGTATCGGATAATGAATTTAAGGAGAAGATTGATCAGATTGGGAATATGGATCATGTGAACTTGGTGCCACTCAGGGCTTACTATTATAGCAGAGACGAGAAGCTTCTGGTTTATGATTACATGCCTATGGGAAGCTTGTCTGCTCTTTTACATGGAAACAGAGGCTCTGGAAGAACTCCATTGAATTGGGAAACAAGGTGTGGCATTGCTGTCGGAGCTGCTCGTGCAATCACATACTTGCACTCTCATGGTCCCACAATCTCCCATGGAAACATCAAATCTTCAAACATTCTTCTCACTTCGTCTTATGAAGCTCGCGTCTCTGACTTTTGCCTTGCTCATTTTGCAAGCCCAACCGCTACTCCCAACCGCATTTCTGGTTATCGTGCTCCAGAAGTCACAGATACTAGTAAAGTAACCCAAAAGGCAGATGTTTACAGCTTTGGTGTGTTGCTATTGGAGCTGCTTACAGGGAAGCCTCCAACCCAATCCCTCATGACTGAGGAAGGAGTAGACCTTCCAAGATGGGTTCACTCTGTTGTTCGAGAGGAGTGGACTGTGGAGGTGTTTGACCTTGAGCTTCTCAGGTACCAGACTGTCGAGGACGAAATGGTTCAGATTTTACAGATTGCACTTGAATGTACTGTTCAGCACCCTGATAAGCGGCCTTCAATGGCTGAAGTGACTAGCCAGATTGAGGAGCTTTATAGTGCCAGCTTGAGGCATGGACAAGATGAAAATCAGGTGGATGATGGGATTTCTCAGCAGTATTTCTCAACTGACACACACATCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0008150 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0016020 GO:0030054 GO:0030312 GO:0031090 GO:0031224 GO:0031225 GO:0031226 GO:0033993 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071944 GO:0097305 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

638

Amino Acids

69.58

Weight (kDa)

6.87

Isoelectric Point (pI)

33.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 65	2.1e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	84 - 175	8.9e-08	Leucine-rich repeat region
LRR_8	PF13855	117 - 176	8e-07	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	343 - 604	1.9e-34	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	343 - 602	8.4e-34	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002683)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48480
fragaria_vesca	FvH4_2g12190 FvH4_2g12190 FvH4_5g17570
malus_domestica	MD02G1259100.v1.1 MD06G1231600.v1.1 MD09G1086600.v1.1 MD09G1271200.v1.1 MD14G1238300.v1.1 MD17G1269300.v1.1
prunus_persica	Prupe.3G017300_v2.0.a1 Prupe.5G235500_v2.0.a1
pyrus_communis	pycom06g20550 pycom09g18220 pycom14g19950 pycom17g26800
rosa_chinensis	RchiOBHm_Chr3g0491091 RchiOBHm_Chr7g0178081
rosa_laevigata	RLG00000005473 RLG00000022865
rosa_multiflora	Rmu_co8170494.1_g000001 Rmu_co8379533.1_g000001 Rmu_co8445967.1_g000001 Rmu_sc0000425.1_g000007 Rmu_sc0005038.1_g000014 Rmu_ssc0000386.1_g000061 Rmu_ssc0000386.1_g000063
rosa_roxburghii	Rroxscaffold_6G00393220
rosa_rugosa	Rorug03G0246000 Rorug06G0413300
rosa_samantha	Rh3AG296200 Rh3BG332200 Rh3CG329300 Rh3DG329900 Rh7AG012600 Rh7BG012500 Rh7CG012500 Rh7DG012800
rosa_wichuraiana	Rw3G026140 Rw7G000990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	585
AasI	GACNNNNNNGTC	1 cut(s)	196
Acc65I	GGTACC	2 cut(s)	604, 1707
AccB1I	GGYRCC	4 cut(s)	604, 635, 1183, 1707
AccBSI	CCGCTC	2 cut(s)	138, 560
AccI	GTMKAC	1 cut(s)	1632
AccII	CGCG	5 cut(s)	222, 308, 862, 875, 1437
AclWI	GGATC	2 cut(s)	764, 1176
AcoI	YGGCCR	3 cut(s)	69, 626, 934
AcsI	RAATTY	2 cut(s)	465, 1133
AcuI	CTGAAG	1 cut(s)	1818
AfaI	GTAC	6 cut(s)	55, 606, 806, 1032, 1709, 1762
AfiI	CCNNNNNNNGG	9 cut(s)	233, 511, 547, 563, 628, 645, 687, 1816, 1839
AflIII	ACRYGT	1 cut(s)	220
AgsI	TTSAA	7 cut(s)	574, 881, 1108, 1303, 1404, 1757, 1791
AhlI	ACTAGT	1 cut(s)	1526
AjiI	CACGTC	1 cut(s)	192
AjnI	CCWGG	2 cut(s)	176, 423
Alw21I	GWGCWC	1 cut(s)	1510
Alw26I	GTCTC	7 cut(s)	65, 155, 266, 297, 445, 1206, 1444
AlwI	GGATC	2 cut(s)	764, 1176
AlwNI	CAGNNNCTG	2 cut(s)	106, 424
AoxI	GGCC	9 cut(s)	18, 69, 133, 244, 316, 626, 678, 934, 1784
ApeKI	GCWGC	4 cut(s)	250, 655, 1337, 1582
ApoI	RAATTY	2 cut(s)	465, 1133
ArsI	GACNNNNNNTTYG	4 cut(s)	392, 424, 485, 517
Asp700I	GAANNNNTTC	1 cut(s)	1731
Asp718I	GGTACC	2 cut(s)	604, 1707
AspLEI	GCGC	2 cut(s)	310, 859
AspS9I	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
AsuC2I	CCSGG	3 cut(s)	228, 475, 542
AsuHPI	GGTGA	2 cut(s)	473, 997
AsuII	TTCGAA	1 cut(s)	914
AsuNHI	GCTAGC	1 cut(s)	122
AvaII	GGWCC	3 cut(s)	202, 389, 1370
BalI	TGGCCA	1 cut(s)	936
BanI	GGYRCC	4 cut(s)	604, 635, 1183, 1707
BauI	CACGAG	1 cut(s)	1341
Bbv12I	GWGCWC	1 cut(s)	1510
BbvCI	CCTCAGC	1 cut(s)	1026
BbvI	GCAGC	4 cut(s)	237, 667, 1324, 1569
BccI	CCATC	3 cut(s)	151, 1638, 1865
BceAI	ACGGC	3 cut(s)	331, 693, 1071
BcgI	CGANNNNNNTGC	2 cut(s)	1312, 1346
BciT130I	CCWGG	2 cut(s)	178, 425
BciVI	GTATCC	1 cut(s)	895
BclI	TGATCA	1 cut(s)	1150
BcnI	CCSGG	3 cut(s)	228, 475, 542
BcoDI	GTCTC	7 cut(s)	65, 155, 266, 297, 445, 1206, 1444
BcuI	ACTAGT	1 cut(s)	1526
BfaI	CTAG	3 cut(s)	123, 1527, 1806
BfmI	CTRYAG	1 cut(s)	353
BfuI	GTATCC	1 cut(s)	895
BisI	GCNGC	9 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583, 1784
BlsI	GCNGC	9 cut(s)	73, 137, 252, 657, 861, 1069, 1339, 1584, 1785
Bme1390I	CCNGG	5 cut(s)	178, 228, 425, 475, 542
Bme18I	GGWCC	3 cut(s)	202, 389, 1370
BmgBI	CACGTC	1 cut(s)	192
BmgT120I	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
BmiI	GGNNCC	6 cut(s)	390, 606, 637, 1185, 1372, 1709
BmrFI	CCNGG	5 cut(s)	178, 228, 425, 475, 542
BmsI	GCATC	1 cut(s)	1028
BmtI	GCTAGC	1 cut(s)	126
BoxI	GACNNNNGTC	1 cut(s)	32
BpmI	CTGGAG	2 cut(s)	446, 1494
Bpu10I	CCTNAGC	1 cut(s)	1026
Bpu14I	TTCGAA	1 cut(s)	914
BpuEI	CTTGAG	2 cut(s)	1715, 1858
BpuMI	CCSGG	3 cut(s)	228, 475, 542
BsaBI	GATNNNNATC	1 cut(s)	1857
BsaI	GGTCTC	2 cut(s)	155, 266
BsaJI	CCNNGG	5 cut(s)	241, 860, 873, 1089, 1384
BsaWI	WCCGGW	1 cut(s)	458
Bsc4I	CCNNNNNNNGG	9 cut(s)	233, 511, 547, 563, 628, 645, 687, 1816, 1839
Bse118I	RCCGGY	3 cut(s)	16, 588, 628
Bse1I	ACTGG	1 cut(s)	187
Bse3DI	GCAATG	1 cut(s)	1323
Bse8I	GATNNNNATC	1 cut(s)	1857
BseBI	CCWGG	2 cut(s)	178, 425
BseDI	CCNNGG	5 cut(s)	241, 860, 873, 1089, 1384
BseGI	GGATG	2 cut(s)	442, 1873
BseJI	GATNNNNATC	1 cut(s)	1857
BseLI	CCNNNNNNNGG	9 cut(s)	233, 511, 547, 563, 628, 645, 687, 1816, 1839
BseMI	GCAATG	1 cut(s)	1323
BseMII	CTCAG	9 cut(s)	76, 204, 458, 684, 1017, 1204, 1611, 1717, 1895
BseNI	ACTGG	1 cut(s)	187
BseRI	GAGGAG	3 cut(s)	530, 1682, 1832
BseXI	GCAGC	4 cut(s)	237, 667, 1324, 1569
Bsh1236I	CGCG	5 cut(s)	222, 308, 862, 875, 1437
Bsh1285I	CGRYCG	1 cut(s)	474
BshFI	GGCC	9 cut(s)	20, 71, 135, 246, 318, 628, 680, 936, 1786
BshNI	GGYRCC	4 cut(s)	604, 635, 1183, 1707
BsiEI	CGRYCG	1 cut(s)	474
BsiHKAI	GWGCWC	1 cut(s)	1510
BsiSI	CCGG	7 cut(s)	17, 228, 459, 474, 542, 589, 629
BslFI	GGGAC	6 cut(s)	249, 487, 703, 1057, 1066, 1356
BslI	CCNNNNNNNGG	9 cut(s)	233, 511, 547, 563, 628, 645, 687, 1816, 1839
BsmAI	GTCTC	7 cut(s)	65, 155, 266, 297, 445, 1206, 1444
BsmBI	CGTCTC	2 cut(s)	1206, 1444
BsmFI	GGGAC	6 cut(s)	249, 487, 703, 1057, 1066, 1356
BsmI	GAATGC	2 cut(s)	922, 985
BsnI	GGCC	9 cut(s)	20, 71, 135, 246, 318, 628, 680, 936, 1786
Bso31I	GGTCTC	2 cut(s)	155, 266
Bsp119I	TTCGAA	1 cut(s)	914
Bsp1286I	GDGCHC	1 cut(s)	1510
Bsp143I	GATC	5 cut(s)	82, 756, 893, 1150, 1168
Bsp19I	CCATGG	3 cut(s)	241, 1089, 1384
BspANI	GGCC	9 cut(s)	20, 71, 135, 246, 318, 628, 680, 936, 1786
BspCNI	CTCAG	9 cut(s)	75, 205, 457, 685, 1018, 1203, 1612, 1716, 1894
BspFNI	CGCG	5 cut(s)	222, 308, 862, 875, 1437
BspHI	TCATGA	1 cut(s)	1614
BspLI	GGNNCC	6 cut(s)	390, 606, 637, 1185, 1372, 1709
BspMAI	CTGCAG	1 cut(s)	357
BspOI	GCTAGC	1 cut(s)	126
BspPI	GGATC	2 cut(s)	764, 1176
BspT104I	TTCGAA	1 cut(s)	914
BspT107I	GGYRCC	4 cut(s)	604, 635, 1183, 1707
BspTNI	GGTCTC	2 cut(s)	155, 266
BsrBI	CCGCTC	2 cut(s)	138, 560
BsrDI	GCAATG	1 cut(s)	1323
BsrFI	RCCGGY	3 cut(s)	16, 588, 628
BsrI	ACTGG	1 cut(s)	187
BssAI	RCCGGY	3 cut(s)	16, 588, 628
BssECI	CCNNGG	5 cut(s)	241, 860, 873, 1089, 1384
BssMI	GATC	5 cut(s)	82, 756, 893, 1150, 1168
BssSI	CACGAG	1 cut(s)	1341
BssT1I	CCWWGG	3 cut(s)	241, 1089, 1384
Bst2BI	CACGAG	1 cut(s)	1341
Bst2UI	CCWGG	2 cut(s)	178, 425
Bst4CI	ACNGT	6 cut(s)	34, 570, 1120, 1678, 1717, 1765
Bst6I	CTCTTC	2 cut(s)	934, 1094
BstBI	TTCGAA	1 cut(s)	914
BstC8I	GCNNGC	8 cut(s)	76, 124, 248, 558, 626, 1435, 1468, 1834
BstDEI	CTNAG	9 cut(s)	62, 213, 444, 693, 1026, 1190, 1620, 1703, 1881
BstDSI	CCRYGG	5 cut(s)	241, 860, 873, 1089, 1384
BstF5I	GGATG	2 cut(s)	442, 1873
BstFNI	CGCG	5 cut(s)	222, 308, 862, 875, 1437
BstHHI	GCGC	2 cut(s)	310, 859
BstKTI	GATC	5 cut(s)	85, 759, 896, 1153, 1171
BstMAI	GTCTC	7 cut(s)	65, 155, 266, 297, 445, 1206, 1444
BstMBI	GATC	5 cut(s)	82, 756, 893, 1150, 1168
BstMCI	CGRYCG	1 cut(s)	474
BstMWI	GCNNNNNNNGC	6 cut(s)	132, 1064, 1334, 1343, 1463, 1579
BstNI	CCWGG	2 cut(s)	178, 425
BstNSI	RCATGY	1 cut(s)	1243
BstPAI	GACNNNNGTC	1 cut(s)	32
BstSCI	CCNGG	5 cut(s)	176, 226, 423, 473, 540
BstSFI	CTRYAG	1 cut(s)	353
BstUI	CGCG	5 cut(s)	222, 308, 862, 875, 1437
BstV1I	GCAGC	4 cut(s)	237, 667, 1324, 1569
BstXI	CCANNNNNNTGG	3 cut(s)	37, 530, 1305
BsuI	GTATCC	1 cut(s)	895
BsuRI	GGCC	9 cut(s)	20, 71, 135, 246, 318, 628, 680, 936, 1786
BtgI	CCRYGG	5 cut(s)	241, 860, 873, 1089, 1384
BtrI	CACGTC	1 cut(s)	192
BtsCI	GGATG	2 cut(s)	442, 1873
BtsI	GCAGTG	1 cut(s)	1101
BtsIMutI	CAGTG	3 cut(s)	30, 210, 1101
Cac8I	GCNNGC	8 cut(s)	76, 124, 248, 558, 626, 1435, 1468, 1834
CaiI	CAGNNNCTG	2 cut(s)	106, 424
CciI	TCATGA	1 cut(s)	1614
CfoI	GCGC	2 cut(s)	310, 859
Cfr10I	RCCGGY	3 cut(s)	16, 588, 628
Cfr13I	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
Cfr42I	CCGCGG	2 cut(s)	863, 876
CpoI	CGGWCCG	1 cut(s)	202
CseI	GACGC	1 cut(s)	1426
Csp6I	GTAC	6 cut(s)	54, 605, 805, 1031, 1708, 1761
CspI	CGGWCCG	1 cut(s)	202
CviAII	CATG	9 cut(s)	242, 1090, 1172, 1240, 1271, 1367, 1385, 1615, 1844
CviQI	GTAC	6 cut(s)	54, 605, 805, 1031, 1708, 1761
DdeI	CTNAG	9 cut(s)	62, 213, 444, 693, 1026, 1190, 1620, 1703, 1881
DpnI	GATC	5 cut(s)	84, 758, 895, 1152, 1170
DpnII	GATC	5 cut(s)	82, 756, 893, 1150, 1168
DrdI	GACNNNNNNGTC	1 cut(s)	196
DseDI	GACNNNNNNGTC	1 cut(s)	196
EaeI	YGGCCR	3 cut(s)	69, 626, 934
Eam1104I	CTCTTC	2 cut(s)	934, 1094
EarI	CTCTTC	2 cut(s)	934, 1094
Eco130I	CCWWGG	3 cut(s)	241, 1089, 1384
Eco31I	GGTCTC	2 cut(s)	155, 266
Eco47I	GGWCC	3 cut(s)	202, 389, 1370
Eco57I	CTGAAG	1 cut(s)	1818
EcoRII	CCWGG	2 cut(s)	176, 423
EcoT14I	CCWWGG	3 cut(s)	241, 1089, 1384
ErhI	CCWWGG	3 cut(s)	241, 1089, 1384
Esp3I	CGTCTC	2 cut(s)	1206, 1444
FaeI	CATG	9 cut(s)	245, 1093, 1175, 1243, 1274, 1370, 1388, 1618, 1847
FaqI	GGGAC	6 cut(s)	249, 487, 703, 1057, 1066, 1356
FatI	CATG	9 cut(s)	241, 1089, 1171, 1239, 1270, 1366, 1384, 1614, 1843
FauI	CCCGC	6 cut(s)	255, 565, 616, 629, 656, 880
FbaI	TGATCA	1 cut(s)	1150
FblI	GTMKAC	1 cut(s)	1632
Fnu4HI	GCNGC	9 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583, 1784
FokI	GGATG	2 cut(s)	449, 1880
Fsp4HI	GCNGC	9 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583, 1784
FspBI	CTAG	3 cut(s)	123, 1527, 1806
GlaI	GCGC	2 cut(s)	309, 858
GluI	GCNGC	9 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583, 1784
GsuI	CTGGAG	2 cut(s)	446, 1494
HaeIII	GGCC	9 cut(s)	20, 71, 135, 246, 318, 628, 680, 936, 1786
HapII	CCGG	7 cut(s)	17, 228, 459, 474, 542, 589, 629
HgaI	GACGC	1 cut(s)	1426
HhaI	GCGC	2 cut(s)	310, 859
Hin1II	CATG	9 cut(s)	245, 1093, 1175, 1243, 1274, 1370, 1388, 1618, 1847
Hin6I	GCGC	2 cut(s)	308, 857
HinP1I	GCGC	2 cut(s)	308, 857
HincII	GTYRAC	1 cut(s)	340
HindII	GTYRAC	1 cut(s)	340
HindIII	AAGCTT	3 cut(s)	614, 1220, 1252
HinfI	GANTC	2 cut(s)	207, 237
HpaI	GTTAAC	1 cut(s)	340
HpaII	CCGG	7 cut(s)	17, 228, 459, 474, 542, 589, 629
HphI	GGTGA	2 cut(s)	473, 997
Hpy166II	GTNNAC	7 cut(s)	54, 340, 1177, 1555, 1633, 1651, 1674
Hpy188I	TCNGA	9 cut(s)	94, 119, 202, 447, 1126, 1155, 1334, 1444, 1737
Hpy188III	TCNNGA	8 cut(s)	25, 329, 398, 760, 1287, 1511, 1615, 1664
Hpy8I	GTNNAC	7 cut(s)	54, 340, 1177, 1555, 1633, 1651, 1674
Hpy99I	CGWCG	1 cut(s)	145
HpyAV	CCTTC	7 cut(s)	31, 982, 1033, 1102, 1619, 1646, 1797
HpyCH4III	ACNGT	6 cut(s)	34, 570, 1120, 1678, 1717, 1765
HpyCH4IV	ACGT	2 cut(s)	143, 191
HpyF10VI	GCNNNNNNNGC	6 cut(s)	132, 1064, 1334, 1343, 1463, 1579
HpyF3I	CTNAG	9 cut(s)	62, 213, 444, 693, 1026, 1190, 1620, 1703, 1881
HpySE526I	ACGT	2 cut(s)	143, 191
Hsp92II	CATG	9 cut(s)	245, 1093, 1175, 1243, 1274, 1370, 1388, 1618, 1847
HspAI	GCGC	2 cut(s)	308, 857
KpnI	GGTACC	2 cut(s)	608, 1711
Ksp22I	TGATCA	1 cut(s)	1150
KspAI	GTTAAC	1 cut(s)	340
KspI	CCGCGG	2 cut(s)	863, 876
Kzo9I	GATC	5 cut(s)	82, 756, 893, 1150, 1168
LmnI	GCTCC	5 cut(s)	743, 1334, 1513, 1579, 1819
Lsp1109I	GCAGC	4 cut(s)	237, 667, 1324, 1569
LweI	GCATC	1 cut(s)	1028
MaeI	CTAG	3 cut(s)	123, 1527, 1806
MaeII	ACGT	2 cut(s)	143, 191
MaeIII	GTNAC	7 cut(s)	187, 208, 216, 1114, 1516, 1534, 1801
MalI	GATC	5 cut(s)	84, 758, 895, 1152, 1170
MbiI	CCGCTC	2 cut(s)	138, 560
MboI	GATC	5 cut(s)	82, 756, 893, 1150, 1168
MboII	GAAGA	9 cut(s)	400, 739, 831, 921, 1111, 1156, 1302, 1392, 1403
MfeI	CAATTG	1 cut(s)	747
MhlI	GDGCHC	1 cut(s)	1510
MlsI	TGGCCA	1 cut(s)	936
MluCI	AATT	8 cut(s)	393, 465, 484, 747, 774, 847, 1133, 1303
MluI	ACGCGT	1 cut(s)	220
MluNI	TGGCCA	1 cut(s)	936
MlyI	GAGTC	2 cut(s)	216, 231
MmeI	TCCRAC	7 cut(s)	109, 117, 180, 414, 528, 1312, 1625
Mox20I	TGGCCA	1 cut(s)	936
MroXI	GAANNNNTTC	1 cut(s)	1731
MscI	TGGCCA	1 cut(s)	936
MseI	TTAA	4 cut(s)	339, 480, 528, 1137
MslI	CAYNNNNRTG	4 cut(s)	1094, 1244, 1365, 1756
Msp20I	TGGCCA	1 cut(s)	936
MspA1I	CMGCKG	5 cut(s)	250, 624, 658, 862, 875
MspI	CCGG	7 cut(s)	17, 228, 459, 474, 542, 589, 629
MspR9I	CCNGG	5 cut(s)	178, 228, 425, 475, 542
MunI	CAATTG	1 cut(s)	747
Mva1269I	GAATGC	2 cut(s)	922, 985
MvaI	CCWGG	2 cut(s)	178, 425
MvnI	CGCG	5 cut(s)	222, 308, 862, 875, 1437
MwoI	GCNNNNNNNGC	6 cut(s)	132, 1064, 1334, 1343, 1463, 1579
NciI	CCSGG	3 cut(s)	228, 475, 542
NcoI	CCATGG	3 cut(s)	241, 1089, 1384
NdeII	GATC	5 cut(s)	82, 756, 893, 1150, 1168
NheI	GCTAGC	1 cut(s)	122
NlaIII	CATG	9 cut(s)	245, 1093, 1175, 1243, 1274, 1370, 1388, 1618, 1847
NlaIV	GGNNCC	6 cut(s)	390, 606, 637, 1185, 1372, 1709
NmeAIII	GCCGAG	1 cut(s)	243
NmuCI	GTSAC	5 cut(s)	187, 208, 1114, 1516, 1801
NspI	RCATGY	1 cut(s)	1243
NspV	TTCGAA	1 cut(s)	914
PagI	TCATGA	1 cut(s)	1614
PctI	GAATGC	2 cut(s)	922, 985
PdmI	GAANNNNTTC	1 cut(s)	1731
PflFI	GACNNNGTC	1 cut(s)	206
PfoI	TCCNGGA	2 cut(s)	176, 540
PkrI	GCNGC	9 cut(s)	73, 137, 252, 657, 861, 1069, 1339, 1584, 1785
PleI	GAGTC	2 cut(s)	215, 231
PpsI	GAGTC	2 cut(s)	215, 231
PshAI	GACNNNNGTC	1 cut(s)	32
PsiI	TTATAA	1 cut(s)	585
Psp6I	CCWGG	2 cut(s)	176, 423
PspGI	CCWGG	2 cut(s)	176, 423
PspN4I	GGNNCC	6 cut(s)	390, 606, 637, 1185, 1372, 1709
PspPI	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
PstI	CTGCAG	1 cut(s)	357
PstNI	CAGNNNCTG	2 cut(s)	106, 424
PsyI	GACNNNGTC	1 cut(s)	206
PvuII	CAGCTG	1 cut(s)	658
RsaI	GTAC	6 cut(s)	55, 606, 806, 1032, 1709, 1762
RsaNI	GTAC	6 cut(s)	54, 605, 805, 1031, 1708, 1761
RseI	CAYNNNNRTG	4 cut(s)	1094, 1244, 1365, 1756
Rsr2I	CGGWCCG	1 cut(s)	202
RsrII	CGGWCCG	1 cut(s)	202
SacII	CCGCGG	2 cut(s)	863, 876
SaqAI	TTAA	4 cut(s)	339, 480, 528, 1137
SatI	GCNGC	9 cut(s)	72, 136, 251, 656, 860, 1068, 1338, 1583, 1784
Sau3AI	GATC	5 cut(s)	82, 756, 893, 1150, 1168
Sau96I	GGNCC	5 cut(s)	202, 245, 317, 389, 1370
SchI	GAGTC	2 cut(s)	216, 231
ScrFI	CCNGG	5 cut(s)	178, 228, 425, 475, 542
SduI	GDGCHC	1 cut(s)	1510
SfaNI	GCATC	1 cut(s)	1028
SfcI	CTRYAG	1 cut(s)	353
Sfr303I	CCGCGG	2 cut(s)	863, 876
SfuI	TTCGAA	1 cut(s)	914
SgrBI	CCGCGG	2 cut(s)	863, 876
SinI	GGWCC	3 cut(s)	202, 389, 1370
SmiMI	CAYNNNNRTG	4 cut(s)	1094, 1244, 1365, 1756
SmlI	CTYRAG	2 cut(s)	1694, 1837
SmoI	CTYRAG	2 cut(s)	1694, 1837
SpeI	ACTAGT	1 cut(s)	1526
Sse9I	AATT	8 cut(s)	393, 465, 484, 747, 774, 847, 1133, 1303
SspMI	CTAG	3 cut(s)	123, 1527, 1806
StyD4I	CCNGG	5 cut(s)	176, 226, 423, 473, 540
StyI	CCWWGG	3 cut(s)	241, 1089, 1384
TaaI	ACNGT	6 cut(s)	34, 570, 1120, 1678, 1717, 1765
TaiI	ACGT	2 cut(s)	146, 194
TaqI	TCGA	5 cut(s)	140, 470, 914, 1663, 1719
TaqII	GACCGA	2 cut(s)	219, 248
TasI	AATT	8 cut(s)	393, 465, 484, 747, 774, 847, 1133, 1303
TatI	WGTACW	3 cut(s)	53, 804, 1760
TauI	GCSGC	5 cut(s)	74, 138, 862, 1070, 1786
Tru1I	TTAA	4 cut(s)	339, 480, 528, 1137
Tru9I	TTAA	4 cut(s)	339, 480, 528, 1137
TscAI	CASTG	3 cut(s)	37, 217, 1101
TseFI	GTSAC	5 cut(s)	187, 208, 1114, 1516, 1801
TseI	GCWGC	4 cut(s)	250, 655, 1337, 1582
Tsp45I	GTSAC	5 cut(s)	187, 208, 1114, 1516, 1801
TspDTI	ATGAA	5 cut(s)	17, 775, 1146, 1443, 1869
TspRI	CASTG	3 cut(s)	37, 217, 1101
Tth111I	GACNNNGTC	1 cut(s)	206
VpaK11BI	GGWCC	3 cut(s)	202, 389, 1370
XapI	RAATTY	2 cut(s)	465, 1133
XceI	RCATGY	1 cut(s)	1243
XcmI	CCANNNNNNNNNTGG	2 cut(s)	37, 82
XmiI	GTMKAC	1 cut(s)	1632
XmnI	GAANNNNTTC	1 cut(s)	1731
XspI	CTAG	3 cut(s)	123, 1527, 1806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.