Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0006882

Physical Location & Seq

Genomic Coordinates Forward (+)

35429844 .. 35432916

Gene Structure 3073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1277600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGATAACGAGGTTCTTTGGGTGTAGATTTTTCAGGAATTGCACCCACCCCGATGACGACCAACGTGAACAACTCTGTAGGGAGTTGGGGCTTGACGCAAATCAAATCACGTTTTGGTTTCAAAACAAAAGAACACAGAACAAGATACAAAATGAAAGAGCAGAAAACATTGCTCTTCATCAACTGAATGAAAGTATTCGTCGTGAAAACTGTTTAATGAGAGAAACCTTAAAGATTGTCGTTTGCCCAACTTGTGGTGGTGCATCGATTCCAGAAGAAGAGCGACAACTCAATATACAAAGACTTCGACAGGAGAATGTCTATTTGAAACAAGAGCATGATAAAGTAGCCAGCAGCCTTCTTTCCAAGTATAAAGGGAAACCACTATCACATATTAAATCGTTGGCGCCAGTAGTTGGATCGTCGCAAAATTTATCACCAGGATGTTCCTTGAACCATGTGATCGTCAGAAGTCCACCTCTTAGGCTCAATCTCACCAATACCGCAATAGCTTACCAATTAAACGAAAATGTTCAGATGGAAAAGGCACTCATGAAAGACATTGCAGCCAGTGCCATGGAAGAACTGATCAAGCTTTTCCAAATCGACAAGCCTGTGTGGATGAAATCCCCAACTGATGGCAGATATCTCCTCAACCGGGACAACTATGATAAGATGTTCCCAAAAGCCAATCACTTCAGAAACTCTTGTGCTCGTGTCGAGTCTTCGAAGGATTCAGGAGTAGTGCACATTAGTGCAGCATACTTGGTTGACATGTTTTTAGATTTCAATAAATGGGAAGACGTCTTTCCTACAATCATAACAAAAGCAAGGACAATTGAAGTTCTCGAAAGTGGAATGATAGGAAATCGGAGTGGTTGCTTGCAGTTGATGTATGAAGAAATGCACATTCTCTCACCTTTGGTACTGCCGCGGGATTTCTACTTTCTTCGCCATTGTCAGCAAATTGAGCTAGGAACTTGGGTCATCACTGATGTCTCCTATAACTTCGCAAAAGGAAGTTTTGCGAGACAGCCTCGATCTTGGAGGCTACCTTCTGGATGCATGATAGAAGACATGCATAACGGATACTCCAAGATTACTTGGATTGAGCATATGGCGGTTGACGACAAGACACAAACTCATTGGCTCTATAGAGATCTAATTTGTAGAAGTGTTGCATATGGAGCTGAGAGATGGATTGTTACTCTTCAAAAGATGTGTGAGAGATTCCATTGTTTAATGAACGGTTGTGTGTTTGGAGGAGTGGTTACTTTGCCTGAAGGCAAGAGAAGCTTAATGAAGCTTTCCCAGAGGATGGTAAAGAACTTTTGTGGAATGTTGAGCATGGCGGGAAATCTTGACCCCCCCCAATTATCAGAAGTTGACAATACTGGGATTCAAGTCTCTGTTCATACAAGCACAGAAATAGGACAACCGCATGGCACGATCGTCAGTGTTGCTACTTCTTTCTGGCTTCCTTTGTCGACGCAAATGATCTTTAACTTCTTCAAAGATGAGAAAACAAGAGTTCAGTGGGATGTTCTCTCTAATGGAAATCCAGTGCATGAGATTGCCTACATTTCAACAGGAACTCATCCTGAAAATCGTATATCCATCATTCGGCCTTTCACCCCGACGGAGGACAACATGTTGATTCTTCAAGAGTGCTACATAGACCCTCTTGGATCCTTTATCATATATGCTCCGGTTGACATGCAAATTCTCAATGTAGCAGTAAGTGGTGAAGACTCTTCTAACATGTCCATACTCCCATCGGGGTTTATGATATCCAGCGATGGTCGTCCTGAGATGGGTGGTGCATGTGGTTCACTTCTTACAGTGGCTTTCCACATATTGGTTTCCAGCCCCACGACTTCAAAGCAGATGAACAAGGAGTTAGTGGCAACTGTCAATACTCTAATCAGTTCCAACGTTGAAAAAATAAAAGTTGCCCTCAACTGTTCTGGCTTGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

660

Amino Acids

74.65

Weight (kDa)

7.0

Isoelectric Point (pI)

49.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	9 - 48	1.3e-10	Homeodomain
START	PF01852	188 - 410	1.3e-31	START domain
PDF2_C	PF25797	427 - 655	4.3e-95	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006882)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03260 AT3G03260
fragaria_vesca	FvH4_1g27700
malus_domestica	MD09G1277500.v1.1 MD09G1277600.v1.1 MD09G1277900.v1.1 MD17G1271000.v1.1 MD17G1271100.v1.1
prunus_persica	Prupe.3G015300_v2.0.a1
pyrus_communis	pycom09g18690 pycom09g18700 pycom09g18710 pycom17g26940
rosa_chinensis	RchiOBHm_Chr3g0488861
rosa_laevigata	RLG00000022916
rosa_multiflora	Rmu_sc0001208.1_g000028
rosa_roxburghii	Rroxscaffold_6G00393800 Rroxscaffold_6G00393810
rosa_rugosa	Rorug03G0242100 Rorug03G0242200
rosa_samantha	Rh3AG290200 Rh3BG327300 Rh3BG327400 Rh3CG324700 Rh3DG323300
rosa_wichuraiana	Rw3G025720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	807
AccB1I	GGYRCC	1 cut(s)	406
AccB7I	CCANNNNNTGG	5 cut(s)	254, 416, 638, 1318, 1858
AccI	GTMKAC	1 cut(s)	1487
AccII	CGCG	1 cut(s)	934
AciI	CCGC	6 cut(s)	504, 932, 934, 1121, 1352, 1439
AclI	AACGTT	1 cut(s)	1935
AclWI	GGATC	3 cut(s)	427, 1683, 1696
AcsI	RAATTY	2 cut(s)	430, 1722
AcuI	CTGAAG	2 cut(s)	682, 1302
AcyI	GRCGYC	2 cut(s)	407, 804
AfaI	GTAC	1 cut(s)	927
AfiI	CCNNNNNNNGG	9 cut(s)	254, 416, 638, 658, 1318, 1623, 1642, 1814, 1858
AflIII	ACRYGT	3 cut(s)	774, 1650, 1761
AjnI	CCWGG	1 cut(s)	439
AleI	CACNNNNGTG	1 cut(s)	753
AluBI	AGCT	6 cut(s)	512, 595, 973, 1190, 1296, 1306
AluI	AGCT	6 cut(s)	512, 595, 973, 1190, 1296, 1306
Alw21I	GWGCWC	2 cut(s)	715, 750
Alw26I	GTCTC	3 cut(s)	1003, 1024, 1411
Alw44I	GTGCAC	1 cut(s)	746
AlwI	GGATC	3 cut(s)	427, 1683, 1696
AoxI	GGCC	1 cut(s)	1625
ApaLI	GTGCAC	1 cut(s)	746
ApeKI	GCWGC	3 cut(s)	354, 566, 758
ApoI	RAATTY	2 cut(s)	430, 1722
Asp700I	GAANNNNTTC	2 cut(s)	195, 531
AspLEI	GCGC	1 cut(s)	409
AsuC2I	CCSGG	1 cut(s)	659
AsuHPI	GGTGA	5 cut(s)	429, 487, 909, 1624, 1757
AsuII	TTCGAA	1 cut(s)	728
BaeGI	GKGCMC	1 cut(s)	750
BamHI	GGATCC	1 cut(s)	1688
BanI	GGYRCC	1 cut(s)	406
BauI	CACGAG	1 cut(s)	714
BbsI	GAAGAC	4 cut(s)	717, 807, 1080, 1755
Bbv12I	GWGCWC	2 cut(s)	715, 750
BbvI	GCAGC	3 cut(s)	366, 578, 770
BccI	CCATC	8 cut(s)	532, 632, 1191, 1312, 1625, 1783, 1793, 1807
BciT130I	CCWGG	1 cut(s)	441
BciVI	GTATCC	1 cut(s)	1082
BclI	TGATCA	1 cut(s)	588
BcnI	CCSGG	1 cut(s)	659
BcoDI	GTCTC	3 cut(s)	1003, 1024, 1411
BfaI	CTAG	1 cut(s)	974
BfmI	CTRYAG	2 cut(s)	76, 1153
BfoI	RGCGCY	1 cut(s)	410
BfuI	GTATCC	1 cut(s)	1082
BglII	AGATCT	1 cut(s)	1159
BisI	GCNGC	4 cut(s)	355, 567, 759, 932
BlsI	GCNGC	4 cut(s)	356, 568, 760, 933
Bme1390I	CCNGG	2 cut(s)	441, 659
BmiI	GGNNCC	2 cut(s)	408, 1690
BmrFI	CCNGG	2 cut(s)	441, 659
BmrI	ACTGGG	1 cut(s)	1404
BmsI	GCATC	2 cut(s)	272, 1052
BmuI	ACTGGG	1 cut(s)	1404
BpiI	GAAGAC	4 cut(s)	717, 807, 1080, 1755
BplI	GAGNNNNNCTC	2 cut(s)	1021, 1053
Bpu14I	TTCGAA	1 cut(s)	728
BpuMI	CCSGG	1 cut(s)	659
Bsa29I	ATCGAT	1 cut(s)	266
BsaHI	GRCGYC	2 cut(s)	407, 804
BsaJI	CCNNGG	2 cut(s)	576, 932
BsaWI	WCCGGW	1 cut(s)	1708
BsaXI	ACNNNNNCTCC	4 cut(s)	1076, 1106, 1254, 1284
Bsc4I	CCNNNNNNNGG	9 cut(s)	254, 416, 638, 658, 1318, 1623, 1642, 1814, 1858
Bse1I	ACTGG	4 cut(s)	410, 570, 1399, 1562
Bse3DI	GCAATG	2 cut(s)	168, 561
BseBI	CCWGG	1 cut(s)	441
BseCI	ATCGAT	1 cut(s)	266
BseDI	CCNNGG	2 cut(s)	576, 932
BseGI	GGATG	6 cut(s)	449, 627, 1067, 1323, 1546, 1597
BseLI	CCNNNNNNNGG	9 cut(s)	254, 416, 638, 658, 1318, 1623, 1642, 1814, 1858
BseMI	GCAATG	2 cut(s)	168, 561
BseMII	CTCAG	2 cut(s)	1182, 1800
BseNI	ACTGG	4 cut(s)	410, 570, 1399, 1562
BseRI	GAGGAG	2 cut(s)	641, 1278
BseSI	GKGCMC	1 cut(s)	750
BseXI	GCAGC	3 cut(s)	366, 578, 770
BsgI	GTGCAG	1 cut(s)	777
Bsh1236I	CGCG	1 cut(s)	934
Bsh1285I	CGRYCG	1 cut(s)	1452
BshFI	GGCC	1 cut(s)	1627
BshNI	GGYRCC	1 cut(s)	406
BshVI	ATCGAT	1 cut(s)	266
BsiEI	CGRYCG	1 cut(s)	1452
BsiHKAI	GWGCWC	2 cut(s)	715, 750
BsiSI	CCGG	2 cut(s)	658, 1709
BslFI	GGGAC	1 cut(s)	674
BslI	CCNNNNNNNGG	9 cut(s)	254, 416, 638, 658, 1318, 1623, 1642, 1814, 1858
BsmAI	GTCTC	3 cut(s)	1003, 1024, 1411
BsmFI	GGGAC	1 cut(s)	674
BsnI	GGCC	1 cut(s)	1627
Bsp119I	TTCGAA	1 cut(s)	728
Bsp1286I	GDGCHC	2 cut(s)	715, 750
Bsp143I	GATC	8 cut(s)	419, 462, 588, 1040, 1159, 1449, 1497, 1688
Bsp19I	CCATGG	1 cut(s)	576
BspACI	CCGC	6 cut(s)	504, 932, 934, 1121, 1352, 1439
BspANI	GGCC	1 cut(s)	1627
BspCNI	CTCAG	2 cut(s)	1183, 1801
BspDI	ATCGAT	1 cut(s)	266
BspFNI	CGCG	1 cut(s)	934
BspHI	TCATGA	1 cut(s)	552
BspLI	GGNNCC	2 cut(s)	408, 1690
BspPI	GGATC	3 cut(s)	427, 1683, 1696
BspQI	GCTCTTC	2 cut(s)	180, 273
BspT104I	TTCGAA	1 cut(s)	728
BspT107I	GGYRCC	1 cut(s)	406
BsrDI	GCAATG	2 cut(s)	168, 561
BsrI	ACTGG	4 cut(s)	410, 570, 1399, 1562
BssECI	CCNNGG	2 cut(s)	576, 932
BssMI	GATC	8 cut(s)	419, 462, 588, 1040, 1159, 1449, 1497, 1688
BssNI	GRCGYC	2 cut(s)	407, 804
BssSI	CACGAG	1 cut(s)	714
BssT1I	CCWWGG	1 cut(s)	576
Bst2BI	CACGAG	1 cut(s)	714
Bst2UI	CCWGG	1 cut(s)	441
Bst4CI	ACNGT	5 cut(s)	212, 1250, 1843, 1912, 1964
Bst6I	CTCTTC	4 cut(s)	180, 273, 1215, 1759
BstACI	GRCGYC	2 cut(s)	407, 804
BstAPI	GCANNNNNTGC	1 cut(s)	572
BstBI	TTCGAA	1 cut(s)	728
BstC8I	GCNNGC	2 cut(s)	352, 884
BstDEI	CTNAG	3 cut(s)	482, 1191, 1809
BstDSI	CCRYGG	2 cut(s)	576, 932
BstF5I	GGATG	6 cut(s)	449, 627, 1067, 1323, 1546, 1597
BstFNI	CGCG	1 cut(s)	934
BstH2I	RGCGCY	1 cut(s)	410
BstHHI	GCGC	1 cut(s)	409
BstKTI	GATC	8 cut(s)	422, 465, 591, 1043, 1162, 1452, 1500, 1691
BstMAI	GTCTC	3 cut(s)	1003, 1024, 1411
BstMBI	GATC	8 cut(s)	419, 462, 588, 1040, 1159, 1449, 1497, 1688
BstMCI	CGRYCG	1 cut(s)	1452
BstMWI	GCNNNNNNNGC	4 cut(s)	572, 970, 1187, 1293
BstNI	CCWGG	1 cut(s)	441
BstNSI	RCATGY	6 cut(s)	778, 1081, 1654, 1720, 1765, 1827
BstSCI	CCNGG	2 cut(s)	439, 657
BstSFI	CTRYAG	2 cut(s)	76, 1153
BstSLI	GKGCMC	1 cut(s)	750
BstUI	CGCG	1 cut(s)	934
BstV1I	GCAGC	3 cut(s)	366, 578, 770
BstV2I	GAAGAC	4 cut(s)	717, 807, 1080, 1755
BstX2I	RGATCY	2 cut(s)	1159, 1688
BstXI	CCANNNNNNTGG	1 cut(s)	577
BstYI	RGATCY	2 cut(s)	1159, 1688
Bsu15I	ATCGAT	1 cut(s)	266
BsuI	GTATCC	1 cut(s)	1082
BsuRI	GGCC	1 cut(s)	1627
BsuTUI	ATCGAT	1 cut(s)	266
BtgI	CCRYGG	2 cut(s)	576, 932
BtgZI	GCGATG	1 cut(s)	1812
BtsCI	GGATG	6 cut(s)	449, 627, 1067, 1323, 1546, 1597
BtsIMutI	CAGTG	6 cut(s)	577, 990, 1462, 1541, 1569, 1848
Cac8I	GCNNGC	2 cut(s)	352, 884
CciI	TCATGA	1 cut(s)	552
CfoI	GCGC	1 cut(s)	409
Cfr42I	CCGCGG	1 cut(s)	935
ClaI	ATCGAT	1 cut(s)	266
CseI	GACGC	2 cut(s)	104, 1498
Csp6I	GTAC	1 cut(s)	926
CviQI	GTAC	1 cut(s)	926
DdeI	CTNAG	3 cut(s)	482, 1191, 1809
DinI	GGCGCC	1 cut(s)	408
DpnI	GATC	8 cut(s)	421, 464, 590, 1042, 1161, 1451, 1499, 1690
DpnII	GATC	8 cut(s)	419, 462, 588, 1040, 1159, 1449, 1497, 1688
Eam1104I	CTCTTC	4 cut(s)	180, 273, 1215, 1759
EarI	CTCTTC	4 cut(s)	180, 273, 1215, 1759
Eco130I	CCWWGG	1 cut(s)	576
Eco32I	GATATC	2 cut(s)	647, 1791
Eco57I	CTGAAG	2 cut(s)	682, 1302
EcoRII	CCWGG	1 cut(s)	439
EcoRV	GATATC	2 cut(s)	647, 1791
EcoT14I	CCWWGG	1 cut(s)	576
EcoT22I	ATGCAT	2 cut(s)	1067, 1083
EgeI	GGCGCC	1 cut(s)	408
EheI	GGCGCC	1 cut(s)	408
ErhI	CCWWGG	1 cut(s)	576
FalI	AAGNNNNNCTT	2 cut(s)	1280, 1312
FaqI	GGGAC	1 cut(s)	674
FauI	CCCGC	2 cut(s)	927, 1345
FauNDI	CATATG	2 cut(s)	1116, 1183
FbaI	TGATCA	1 cut(s)	588
FblI	GTMKAC	1 cut(s)	1487
Fnu4HI	GCNGC	4 cut(s)	355, 567, 759, 932
FokI	GGATG	6 cut(s)	456, 634, 1074, 1330, 1553, 1584
Fsp4HI	GCNGC	4 cut(s)	355, 567, 759, 932
FspBI	CTAG	1 cut(s)	974
GlaI	GCGC	1 cut(s)	408
GluI	GCNGC	4 cut(s)	355, 567, 759, 932
HaeII	RGCGCY	1 cut(s)	410
HaeIII	GGCC	1 cut(s)	1627
HapII	CCGG	2 cut(s)	658, 1709
HgaI	GACGC	2 cut(s)	104, 1498
HhaI	GCGC	1 cut(s)	409
Hin1I	GRCGYC	2 cut(s)	407, 804
Hin6I	GCGC	1 cut(s)	407
HinP1I	GCGC	1 cut(s)	407
HincII	GTYRAC	5 cut(s)	772, 1126, 1387, 1488, 1714
HindII	GTYRAC	5 cut(s)	772, 1126, 1387, 1488, 1714
HindIII	AAGCTT	3 cut(s)	593, 1294, 1304
HinfI	GANTC	7 cut(s)	268, 722, 734, 1230, 1399, 1657, 1751
HpaII	CCGG	2 cut(s)	658, 1709
HphI	GGTGA	5 cut(s)	429, 487, 909, 1624, 1757
Hpy166II	GTNNAC	9 cut(s)	68, 476, 748, 772, 1126, 1387, 1488, 1714, 1832
Hpy188I	TCNGA	5 cut(s)	470, 537, 701, 873, 1381
Hpy8I	GTNNAC	9 cut(s)	68, 476, 748, 772, 1126, 1387, 1488, 1714, 1832
Hpy99I	CGWCG	4 cut(s)	204, 427, 1492, 1642
HpyAV	CCTTC	4 cut(s)	368, 724, 1065, 1277
HpyCH4III	ACNGT	5 cut(s)	212, 1250, 1843, 1912, 1964
HpyCH4IV	ACGT	4 cut(s)	64, 110, 804, 1935
HpyF10VI	GCNNNNNNNGC	4 cut(s)	572, 970, 1187, 1293
HpyF3I	CTNAG	3 cut(s)	482, 1191, 1809
HpySE526I	ACGT	4 cut(s)	64, 110, 804, 1935
Hsp92I	GRCGYC	2 cut(s)	407, 804
HspAI	GCGC	1 cut(s)	407
KasI	GGCGCC	1 cut(s)	406
Ksp22I	TGATCA	1 cut(s)	588
KspI	CCGCGG	1 cut(s)	935
Kzo9I	GATC	8 cut(s)	419, 462, 588, 1040, 1159, 1449, 1497, 1688
LguI	GCTCTTC	2 cut(s)	180, 273
LmnI	GCTCC	2 cut(s)	1187, 1711
Lsp1109I	GCAGC	3 cut(s)	366, 578, 770
LweI	GCATC	2 cut(s)	272, 1052
MaeI	CTAG	1 cut(s)	974
MaeII	ACGT	4 cut(s)	64, 110, 804, 1935
MaeIII	GTNAC	2 cut(s)	1204, 1270
MalI	GATC	8 cut(s)	421, 464, 590, 1042, 1161, 1451, 1499, 1690
MboI	GATC	8 cut(s)	419, 462, 588, 1040, 1159, 1449, 1497, 1688
MfeI	CAATTG	1 cut(s)	837
MflI	RGATCY	2 cut(s)	1159, 1688
MhlI	GDGCHC	2 cut(s)	715, 750
MluCI	AATT	8 cut(s)	37, 430, 518, 837, 966, 1164, 1373, 1722
Mly113I	GGCGCC	1 cut(s)	407
MlyI	GAGTC	2 cut(s)	731, 1745
MmeI	TCCRAC	2 cut(s)	397, 1956
Mph1103I	ATGCAT	2 cut(s)	1067, 1083
MroXI	GAANNNNTTC	2 cut(s)	195, 531
MseI	TTAA	8 cut(s)	215, 230, 396, 521, 1241, 1298, 1503, 1978
MslI	CAYNNNNRTG	3 cut(s)	51, 442, 753
MspA1I	CMGCKG	1 cut(s)	934
MspI	CCGG	2 cut(s)	658, 1709
MspR9I	CCNGG	2 cut(s)	441, 659
MunI	CAATTG	1 cut(s)	837
MvaI	CCWGG	1 cut(s)	441
MvnI	CGCG	1 cut(s)	934
MwoI	GCNNNNNNNGC	4 cut(s)	572, 970, 1187, 1293
NarI	GGCGCC	1 cut(s)	407
NciI	CCSGG	1 cut(s)	659
NcoI	CCATGG	1 cut(s)	576
NdeI	CATATG	2 cut(s)	1116, 1183
NdeII	GATC	8 cut(s)	419, 462, 588, 1040, 1159, 1449, 1497, 1688
NlaIV	GGNNCC	2 cut(s)	408, 1690
NsiI	ATGCAT	2 cut(s)	1067, 1083
NspI	RCATGY	6 cut(s)	778, 1081, 1654, 1720, 1765, 1827
NspV	TTCGAA	1 cut(s)	728
OliI	CACNNNNGTG	1 cut(s)	753
PagI	TCATGA	1 cut(s)	552
PciI	ACATGT	3 cut(s)	774, 1650, 1761
PciSI	GCTCTTC	2 cut(s)	180, 273
PdmI	GAANNNNTTC	2 cut(s)	195, 531
PfeI	GAWTC	5 cut(s)	268, 734, 1230, 1399, 1657
PflMI	CCANNNNNTGG	5 cut(s)	254, 416, 638, 1318, 1858
PkrI	GCNGC	4 cut(s)	356, 568, 760, 933
Ple19I	CGATCG	1 cut(s)	1452
PleI	GAGTC	2 cut(s)	730, 1745
PluTI	GGCGCC	1 cut(s)	410
PpsI	GAGTC	2 cut(s)	730, 1745
PscI	ACATGT	3 cut(s)	774, 1650, 1761
Psp1406I	AACGTT	1 cut(s)	1935
Psp6I	CCWGG	1 cut(s)	439
PspGI	CCWGG	1 cut(s)	439
PspN4I	GGNNCC	2 cut(s)	408, 1690
PsuI	RGATCY	2 cut(s)	1159, 1688
PvuI	CGATCG	1 cut(s)	1452
RsaI	GTAC	1 cut(s)	927
RsaNI	GTAC	1 cut(s)	926
RseI	CAYNNNNRTG	3 cut(s)	51, 442, 753
SacII	CCGCGG	1 cut(s)	935
SalI	GTCGAC	1 cut(s)	1486
SapI	GCTCTTC	2 cut(s)	180, 273
SaqAI	TTAA	8 cut(s)	215, 230, 396, 521, 1241, 1298, 1503, 1978
SatI	GCNGC	4 cut(s)	355, 567, 759, 932
Sau3AI	GATC	8 cut(s)	419, 462, 588, 1040, 1159, 1449, 1497, 1688
SchI	GAGTC	2 cut(s)	731, 1745
ScrFI	CCNGG	2 cut(s)	441, 659
SduI	GDGCHC	2 cut(s)	715, 750
SfaNI	GCATC	2 cut(s)	272, 1052
SfcI	CTRYAG	2 cut(s)	76, 1153
SfoI	GGCGCC	1 cut(s)	408
Sfr303I	CCGCGG	1 cut(s)	935
SfuI	TTCGAA	1 cut(s)	728
SgrBI	CCGCGG	1 cut(s)	935
SmiMI	CAYNNNNRTG	3 cut(s)	51, 442, 753
Sse9I	AATT	8 cut(s)	37, 430, 518, 837, 966, 1164, 1373, 1722
SsiI	CCGC	6 cut(s)	504, 932, 934, 1121, 1352, 1439
SspDI	GGCGCC	1 cut(s)	406
SspMI	CTAG	1 cut(s)	974
StyD4I	CCNGG	2 cut(s)	439, 657
StyI	CCWWGG	1 cut(s)	576
TaaI	ACNGT	5 cut(s)	212, 1250, 1843, 1912, 1964
TaiI	ACGT	4 cut(s)	67, 113, 807, 1938
TaqI	TCGA	8 cut(s)	266, 307, 606, 720, 728, 849, 1039, 1487
TasI	AATT	8 cut(s)	37, 430, 518, 837, 966, 1164, 1373, 1722
TauI	GCSGC	1 cut(s)	934
TfiI	GAWTC	5 cut(s)	268, 734, 1230, 1399, 1657
Tru1I	TTAA	8 cut(s)	215, 230, 396, 521, 1241, 1298, 1503, 1978
Tru9I	TTAA	8 cut(s)	215, 230, 396, 521, 1241, 1298, 1503, 1978
TscAI	CASTG	6 cut(s)	577, 997, 1462, 1541, 1569, 1848
TseI	GCWGC	3 cut(s)	354, 566, 758
TspGWI	ACGGA	2 cut(s)	1101, 1655
TspRI	CASTG	6 cut(s)	577, 997, 1462, 1541, 1569, 1848
Van91I	CCANNNNNTGG	5 cut(s)	254, 416, 638, 1318, 1858
VneI	GTGCAC	1 cut(s)	746
XapI	RAATTY	2 cut(s)	430, 1722
XceI	RCATGY	6 cut(s)	778, 1081, 1654, 1720, 1765, 1827
XmiI	GTMKAC	1 cut(s)	1487
XmnI	GAANNNNTTC	2 cut(s)	195, 531
XspI	CTAG	1 cut(s)	974
ZraI	GACGTC	1 cut(s)	805
Zsp2I	ATGCAT	2 cut(s)	1067, 1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.