Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0006882

Physical Location & Seq

Genomic Coordinates Forward (+)

15101472 .. 15105849

Gene Structure 4378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022916

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGGACCTTCCAATGGGAAATGAAAATGAAAATGGTGGAGCCTCGGGTGATGAACAGGAAGCATCGAATTCTCGCAAGAGAGGGAAGACTTATCACCGCCACACCTCTCAGCAGATACAACTTCTCGAAGCATTTTTCAAGAAATGCCCCCACCCGGACGATAACCAACGTCGTCAGTTGAGCAAGGAGTTAGGGTTAGAGCCACAACAGATCAAGTTTTGGTTCCAAAACAAGAGGACTCAAACAAAGACTCAAACTGAGAGAGCAGACAACTCTACTCTTCGAGCGGAAAATAGTAGGATCCAGTGTGAGAACTATGCAATTAAAGAGGCTTTGAAGAATGTCATTTGTCCTGCTTGTGGGGGTCCTCCTTTTGGAGAGCAAGACCGGCAGAAGAGTTTGCAGAAACTTCACTTGGAGAATGCCCAATTGAAAGAAGAGCATGACAAAGTAGCCACCCTTCTTTCCAAGTATATTGGGAAACCGCTATCTCAAATAGATTCGTTGACATATGCCGCTAGATCCTCGCTGGATGTATCACCAGGATTGTTAATAAACCAAGCAATGAGAAGTTCTGATGAATTTATTAATCCTACAATTAGTAACAATGTTGCGTTAGCTTATTATCAGGTAAATGCAATCCCTGAGACTGAAAAGGCAGTCATGATAGAGACAGCGACAAGTGCCATGGAAAAGTTAATTAGAATTTTGCGGATCAATGAGCCTATGTGGATCAAGTCCAACAGTGACGGGAGATATGTCCTTAACCATGAAAACTATGATAAGATATTTCCAAGGGCTTATCGCTTAAAAACCTCCAGTGCTCGTATAGAGTCTTCAAAAGATTCAGGAATTGCGAGCATTAGTGCACTACAATTGGTTGACACATTTTTAGATGCAAATAAGTGGGTAGACCTCTTTCCAACAATTGTGACGAAAGCTAAAACAATTGAAGTACTCCAAGCAGGAATGTTTGGGACACAAAGTGGTTGCTTACAACTGATGTATGGGCAAATGCACATTCTTTCACCCCTGGTGCTTCCACGAGATTTCTACTTTCTCCGCTTTTGTCAGCAAATCGAAGTTGGCACATGGGTGATTGTTGATGTCTCTTATGATTGCTTTAAAGAAAGTACTACTCAACGATCATGGAGGCTTCCTTCAGGATGCATGATTCAAGACATGCCAAATGGATGCTCTAAGGTAACTTGGGTTGAACACGTGGAAGTCGATGATAAGACACAAACTCATCGGCTCTATAGAGATCTTGTGTGTGGTAGCATCGCATATGGAGCACGAAGATGGATTGTTACTCTCCAGAGGATGTGTGAAAGATTTGGTTGCTCATTCGATGACGTTTCATCTAGTAGTGAATTTGGAGCAATGTTTGCTATGCCCGAAGGCAGGAGTAGCATAATGAAGCTTTCCCACAGGATGGTTAAGAACTTTTGTGGAATGTTAAGCATGTCAGGAAAACTTGATTTCCCTCAACTATCAGAAGTGAATAATAGCGGGGTTCGAGTCAACGTTCGTAAAAGCATAGAACCAGGCGAGCCCAGTGGCATGGTCGTCGTTGCTGCTTCTTCTCTATGGCTTCCTCTACATTCCCAAGACGTCTTTAACTTCTTCGCAAATGAAAAAACAAGAGTGCAGTGGGATGTCCTCTCTAACGGAAATCCAACGAATGAGATTGCACACATTCCAACTGGAGCTCATCCAGGGAACTGTATTTCTATTATTCAGCCTTTTGTACCGACAGAGGGTAATATGCTTCTTTTGCAAGAAAGTTATATAGACACTCTGGGGTCTATGGTTATCTATGCTCCTGTCGAGGTAGCTACTATCAATACAGCAGTCGGGGGTGAGGTTGACTCTTCTGACATTCCTATACTTCCCTCGGGGTTCATAATCTCAGATGATGGTCGTCCTGATACTGGGACTTCGAGCAGCACAAACCCTGCCAGATCAGGTGGTTCACTCCTCACAGTGGCTTTCCAGATATTGGTTCCCTTCCCCTCACCTTCACAACTGCTGAACGTTGAGTCCGTGGCAACTGTCAATACTCTTATTAGTTTGACTGTTCAAAAAATAAAAACTGCTCTCAACTGCGCTGGCTTGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

708

Amino Acids

78.56

Weight (kDa)

6.17

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	29 - 83	7.5e-18	Homeodomain
Homeobox_KN	PF05920	48 - 80	5.3e-06	Homeobox KN domain
START	PF01852	227 - 445	8.7e-30	START domain
PDF2_C	PF25797	466 - 703	3.9e-102	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006882)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03260 AT3G03260
fragaria_vesca	FvH4_1g27700
malus_domestica	MD09G1277500.v1.1 MD09G1277600.v1.1 MD09G1277900.v1.1 MD17G1271000.v1.1 MD17G1271100.v1.1
prunus_persica	Prupe.3G015300_v2.0.a1
pyrus_communis	pycom09g18690 pycom09g18700 pycom09g18710 pycom17g26940
rosa_chinensis	RchiOBHm_Chr3g0488861
rosa_laevigata	RLG00000022916
rosa_multiflora	Rmu_sc0001208.1_g000028
rosa_roxburghii	Rroxscaffold_6G00393800 Rroxscaffold_6G00393810
rosa_rugosa	Rorug03G0242100 Rorug03G0242200
rosa_samantha	Rh3AG290200 Rh3BG327300 Rh3BG327400 Rh3CG324700 Rh3DG323300
rosa_wichuraiana	Rw3G025720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1617
AccB7I	CCANNNNNTGG	2 cut(s)	1435, 2002
AccBSI	CCGCTC	1 cut(s)	287
AccI	GTMKAC	1 cut(s)	912
AciI	CCGC	7 cut(s)	97, 287, 485, 516, 712, 1063, 1512
AclI	AACGTT	2 cut(s)	1527, 2037
AclWI	GGATC	5 cut(s)	295, 308, 516, 722, 740
AcsI	RAATTY	4 cut(s)	67, 581, 705, 1373
AcuI	CTGAAG	1 cut(s)	1146
AcvI	CACGTG	1 cut(s)	1222
AcyI	GRCGYC	1 cut(s)	1614
AdeI	CACNNNGTG	1 cut(s)	986
AfaI	GTAC	3 cut(s)	957, 1135, 1752
AflIII	ACRYGT	1 cut(s)	1219
AgsI	TTSAA	8 cut(s)	139, 337, 433, 840, 953, 1178, 1217, 2084
AjnI	CCWGG	4 cut(s)	541, 1032, 1546, 1717
AjuI	GAANNNNNNNTTGG	2 cut(s)	398, 430
AleI	CACNNNNGTG	1 cut(s)	1094
AloI	GAACNNNNNNTCC	2 cut(s)	2027, 2059
AluBI	AGCT	5 cut(s)	620, 941, 1423, 1712, 1838
AluI	AGCT	5 cut(s)	620, 941, 1423, 1712, 1838
Alw21I	GWGCWC	4 cut(s)	826, 871, 1297, 1714
Alw26I	GTCTC	3 cut(s)	641, 665, 1114
Alw44I	GTGCAC	1 cut(s)	867
AlwI	GGATC	5 cut(s)	295, 308, 516, 722, 740
Ama87I	CYCGRG	2 cut(s)	43, 1897
ApaLI	GTGCAC	1 cut(s)	867
ApeKI	GCWGC	2 cut(s)	1577, 1947
ApoI	RAATTY	4 cut(s)	67, 581, 705, 1373
AseI	ATTAAT	1 cut(s)	588
AspLEI	GCGC	1 cut(s)	2111
AspS9I	GGNCC	2 cut(s)	4, 365
AsuC2I	CCSGG	1 cut(s)	155
AsuHPI	GGTGA	7 cut(s)	59, 86, 531, 1020, 1108, 1874, 2010
AvaI	CYCGRG	2 cut(s)	43, 1897
AvaII	GGWCC	2 cut(s)	4, 365
BaeGI	GKGCMC	1 cut(s)	871
BamHI	GGATCC	1 cut(s)	300
BanII	GRGCYC	2 cut(s)	1557, 1714
BarI	GAAGNNNNNNTAC	4 cut(s)	444, 476, 820, 852
BauI	CACGAG	1 cut(s)	1044
BbrPI	CACGTG	1 cut(s)	1222
BbsI	GAAGAC	2 cut(s)	92, 828
Bbv12I	GWGCWC	4 cut(s)	826, 871, 1297, 1714
BbvI	GCAGC	2 cut(s)	1564, 1959
BccI	CCATC	3 cut(s)	1296, 1429, 1913
BcgI	CGANNNNNNTGC	2 cut(s)	1552, 1586
BciT130I	CCWGG	4 cut(s)	543, 1034, 1548, 1719
BcnI	CCSGG	1 cut(s)	155
BcoDI	GTCTC	3 cut(s)	641, 665, 1114
BfaI	CTAG	2 cut(s)	519, 1365
BfmI	CTRYAG	1 cut(s)	1258
BglII	AGATCT	1 cut(s)	1264
BisI	GCNGC	3 cut(s)	516, 1578, 1948
BlsI	GCNGC	3 cut(s)	517, 1579, 1949
BmcAI	AGTACT	2 cut(s)	957, 1135
Bme1390I	CCNGG	5 cut(s)	155, 543, 1034, 1548, 1719
Bme18I	GGWCC	2 cut(s)	4, 365
BmeT110I	CYCGRG	2 cut(s)	43, 1897
BmgT120I	GGNCC	2 cut(s)	4, 365
BmiI	GGNNCC	5 cut(s)	40, 224, 302, 366, 2007
BmrFI	CCNGG	5 cut(s)	155, 543, 1034, 1548, 1719
BmrI	ACTGGG	2 cut(s)	1551, 1944
BmsI	GCATC	5 cut(s)	71, 886, 1157, 1184, 1290
BmuI	ACTGGG	2 cut(s)	1551, 1944
BpiI	GAAGAC	2 cut(s)	92, 828
BplI	GAGNNNNNCTC	2 cut(s)	1856, 1888
BpmI	CTGGAG	3 cut(s)	802, 1301, 1728
BpuMI	CCSGG	1 cut(s)	155
BsaAI	YACGTR	1 cut(s)	1222
BsaHI	GRCGYC	1 cut(s)	1614
BsaJI	CCNNGG	7 cut(s)	42, 687, 794, 1032, 1718, 1896, 2046
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bse118I	RCCGGY	1 cut(s)	387
Bse1I	ACTGG	5 cut(s)	304, 819, 1557, 1711, 1939
Bse3DI	GCAATG	2 cut(s)	570, 1389
BseBI	CCWGG	4 cut(s)	543, 1034, 1548, 1719
BseDI	CCNNGG	7 cut(s)	42, 687, 794, 1032, 1718, 1896, 2046
BseGI	GGATG	7 cut(s)	538, 1172, 1199, 1329, 1440, 1663, 1714
BseMI	GCAATG	2 cut(s)	570, 1389
BseMII	CTCAG	4 cut(s)	122, 249, 636, 1926
BseNI	ACTGG	5 cut(s)	304, 819, 1557, 1711, 1939
BseRI	GAGGAG	1 cut(s)	1970
BseSI	GKGCMC	1 cut(s)	871
BseXI	GCAGC	2 cut(s)	1564, 1959
BsgI	GTGCAG	1 cut(s)	1670
BsiHKAI	GWGCWC	4 cut(s)	826, 871, 1297, 1714
BsiHKCI	CYCGRG	2 cut(s)	43, 1897
BsiSI	CCGG	2 cut(s)	155, 388
BslFI	GGGAC	2 cut(s)	991, 1951
BsmAI	GTCTC	3 cut(s)	641, 665, 1114
BsmFI	GGGAC	2 cut(s)	991, 1951
BsmI	GAATGC	1 cut(s)	427
BsoBI	CYCGRG	2 cut(s)	43, 1897
Bsp1286I	GDGCHC	5 cut(s)	826, 871, 1297, 1557, 1714
Bsp143I	GATC	8 cut(s)	210, 300, 521, 714, 732, 1145, 1264, 1964
Bsp19I	CCATGG	1 cut(s)	687
BspACI	CCGC	7 cut(s)	97, 287, 485, 516, 712, 1063, 1512
BspCNI	CTCAG	4 cut(s)	121, 250, 637, 1925
BspHI	TCATGA	1 cut(s)	663
BspLI	GGNNCC	5 cut(s)	40, 224, 302, 366, 2007
BspPI	GGATC	5 cut(s)	295, 308, 516, 722, 740
BspQI	GCTCTTC	1 cut(s)	432
BsrBI	CCGCTC	1 cut(s)	287
BsrDI	GCAATG	2 cut(s)	570, 1389
BsrFI	RCCGGY	1 cut(s)	387
BsrI	ACTGG	5 cut(s)	304, 819, 1557, 1711, 1939
BssAI	RCCGGY	1 cut(s)	387
BssECI	CCNNGG	7 cut(s)	42, 687, 794, 1032, 1718, 1896, 2046
BssMI	GATC	8 cut(s)	210, 300, 521, 714, 732, 1145, 1264, 1964
BssNI	GRCGYC	1 cut(s)	1614
BssSI	CACGAG	1 cut(s)	1044
BssT1I	CCWWGG	2 cut(s)	687, 794
Bst2BI	CACGAG	1 cut(s)	1044
Bst2UI	CCWGG	4 cut(s)	543, 1034, 1548, 1719
Bst4CI	ACNGT	5 cut(s)	746, 1727, 1987, 2056, 2080
Bst6I	CTCTTC	4 cut(s)	285, 389, 432, 1879
BstACI	GRCGYC	1 cut(s)	1614
BstAPI	GCANNNNNTGC	1 cut(s)	1388
BstBAI	YACGTR	1 cut(s)	1222
BstC8I	GCNNGC	3 cut(s)	859, 1553, 2113
BstDEI	CTNAG	5 cut(s)	108, 258, 645, 1200, 1912
BstDSI	CCRYGG	2 cut(s)	687, 2046
BstF5I	GGATG	7 cut(s)	538, 1172, 1199, 1329, 1440, 1663, 1714
BstHHI	GCGC	1 cut(s)	2111
BstKTI	GATC	8 cut(s)	213, 303, 524, 717, 735, 1148, 1267, 1967
BstMAI	GTCTC	3 cut(s)	641, 665, 1114
BstMBI	GATC	8 cut(s)	210, 300, 521, 714, 732, 1145, 1264, 1964
BstMWI	GCNNNNNNNGC	6 cut(s)	388, 683, 1292, 1388, 1410, 1777
BstNI	CCWGG	4 cut(s)	543, 1034, 1548, 1719
BstNSI	RCATGY	2 cut(s)	1186, 1468
BstSCI	CCNGG	5 cut(s)	153, 541, 1032, 1546, 1717
BstSFI	CTRYAG	1 cut(s)	1258
BstSLI	GKGCMC	1 cut(s)	871
BstV1I	GCAGC	2 cut(s)	1564, 1959
BstV2I	GAAGAC	2 cut(s)	92, 828
BstX2I	RGATCY	3 cut(s)	300, 521, 1264
BstXI	CCANNNNNNTGG	1 cut(s)	1564
BstYI	RGATCY	3 cut(s)	300, 521, 1264
BtgI	CCRYGG	2 cut(s)	687, 2046
BtgZI	GCGATG	1 cut(s)	1267
BtsCI	GGATG	7 cut(s)	538, 1172, 1199, 1329, 1440, 1663, 1714
BtsI	GCAGTG	1 cut(s)	1658
BtsIMutI	CAGTG	6 cut(s)	311, 751, 826, 1564, 1658, 1992
Cac8I	GCNNGC	3 cut(s)	859, 1553, 2113
CciI	TCATGA	1 cut(s)	663
CfoI	GCGC	1 cut(s)	2111
Cfr10I	RCCGGY	1 cut(s)	387
Cfr13I	GGNCC	2 cut(s)	4, 365
Csp6I	GTAC	3 cut(s)	956, 1134, 1751
CviQI	GTAC	3 cut(s)	956, 1134, 1751
DdeI	CTNAG	5 cut(s)	108, 258, 645, 1200, 1912
DpnI	GATC	8 cut(s)	212, 302, 523, 716, 734, 1147, 1266, 1966
DpnII	GATC	8 cut(s)	210, 300, 521, 714, 732, 1145, 1264, 1964
DraI	TTTAAA	1 cut(s)	1126
DraIII	CACNNNGTG	1 cut(s)	986
Eam1104I	CTCTTC	4 cut(s)	285, 389, 432, 1879
EarI	CTCTTC	4 cut(s)	285, 389, 432, 1879
Ecl136II	GAGCTC	1 cut(s)	1712
Eco130I	CCWWGG	2 cut(s)	687, 794
Eco24I	GRGCYC	2 cut(s)	1557, 1714
Eco47I	GGWCC	2 cut(s)	4, 365
Eco53kI	GAGCTC	1 cut(s)	1712
Eco57I	CTGAAG	1 cut(s)	1146
Eco72I	CACGTG	1 cut(s)	1222
Eco88I	CYCGRG	2 cut(s)	43, 1897
EcoICRI	GAGCTC	1 cut(s)	1712
EcoO109I	RGGNCCY	1 cut(s)	365
EcoRI	GAATTC	1 cut(s)	67
EcoRII	CCWGG	4 cut(s)	541, 1032, 1546, 1717
EcoT14I	CCWWGG	2 cut(s)	687, 794
EcoT22I	ATGCAT	1 cut(s)	1172
EcoT38I	GRGCYC	2 cut(s)	1557, 1714
ErhI	CCWWGG	2 cut(s)	687, 794
FaqI	GGGAC	2 cut(s)	991, 1951
FauI	CCCGC	1 cut(s)	1505
FauNDI	CATATG	2 cut(s)	511, 1288
FblI	GTMKAC	1 cut(s)	912
Fnu4HI	GCNGC	3 cut(s)	516, 1578, 1948
FokI	GGATG	7 cut(s)	545, 1179, 1206, 1336, 1447, 1670, 1701
FriOI	GRGCYC	2 cut(s)	1557, 1714
Fsp4HI	GCNGC	3 cut(s)	516, 1578, 1948
FspBI	CTAG	2 cut(s)	519, 1365
GlaI	GCGC	1 cut(s)	2110
GluI	GCNGC	3 cut(s)	516, 1578, 1948
GsuI	CTGGAG	3 cut(s)	802, 1301, 1728
HapII	CCGG	2 cut(s)	155, 388
HhaI	GCGC	1 cut(s)	2111
Hin1I	GRCGYC	1 cut(s)	1614
Hin6I	GCGC	1 cut(s)	2109
HinP1I	GCGC	1 cut(s)	2109
HincII	GTYRAC	4 cut(s)	507, 883, 1525, 1870
HindII	GTYRAC	4 cut(s)	507, 883, 1525, 1870
HindIII	AAGCTT	1 cut(s)	1421
HinfI	GANTC	9 cut(s)	238, 250, 500, 833, 845, 1174, 1521, 1871, 2042
HpaII	CCGG	2 cut(s)	155, 388
HphI	GGTGA	7 cut(s)	59, 86, 531, 1020, 1108, 1874, 2010
Hpy166II	GTNNAC	7 cut(s)	507, 869, 883, 913, 1525, 1870, 1976
Hpy188I	TCNGA	4 cut(s)	577, 1498, 1879, 1915
Hpy8I	GTNNAC	7 cut(s)	507, 869, 883, 913, 1525, 1870, 1976
Hpy99I	CGWCG	2 cut(s)	174, 1574
HpyAV	CCTTC	6 cut(s)	17, 470, 1170, 1394, 2020, 2031
HpyCH4III	ACNGT	5 cut(s)	746, 1727, 1987, 2056, 2080
HpyCH4IV	ACGT	6 cut(s)	169, 1221, 1356, 1527, 1614, 2037
HpyF10VI	GCNNNNNNNGC	6 cut(s)	388, 683, 1292, 1388, 1410, 1777
HpyF3I	CTNAG	5 cut(s)	108, 258, 645, 1200, 1912
HpySE526I	ACGT	6 cut(s)	169, 1221, 1356, 1527, 1614, 2037
Hsp92I	GRCGYC	1 cut(s)	1614
HspAI	GCGC	1 cut(s)	2109
Kzo9I	GATC	8 cut(s)	210, 300, 521, 714, 732, 1145, 1264, 1964
LguI	GCTCTTC	1 cut(s)	432
LmnI	GCTCC	5 cut(s)	38, 1292, 1379, 1709, 1828
Lsp1109I	GCAGC	2 cut(s)	1564, 1959
LweI	GCATC	5 cut(s)	71, 886, 1157, 1184, 1290
MaeI	CTAG	2 cut(s)	519, 1365
MaeII	ACGT	6 cut(s)	169, 1221, 1356, 1527, 1614, 2037
MaeIII	GTNAC	5 cut(s)	602, 746, 931, 1204, 1309
MalI	GATC	8 cut(s)	212, 302, 523, 716, 734, 1147, 1266, 1966
MbiI	CCGCTC	1 cut(s)	287
MboI	GATC	8 cut(s)	210, 300, 521, 714, 732, 1145, 1264, 1964
MfeI	CAATTG	4 cut(s)	428, 875, 927, 948
MflI	RGATCY	3 cut(s)	300, 521, 1264
MhlI	GDGCHC	5 cut(s)	826, 871, 1297, 1557, 1714
MlyI	GAGTC	6 cut(s)	232, 244, 842, 1530, 1865, 2051
MmeI	TCCRAC	4 cut(s)	765, 947, 1703, 1727
Mph1103I	ATGCAT	1 cut(s)	1172
MslI	CAYNNNNRTG	2 cut(s)	1094, 1300
MspI	CCGG	2 cut(s)	155, 388
MspR9I	CCNGG	5 cut(s)	155, 543, 1034, 1548, 1719
MunI	CAATTG	4 cut(s)	428, 875, 927, 948
Mva1269I	GAATGC	1 cut(s)	427
MvaI	CCWGG	4 cut(s)	543, 1034, 1548, 1719
MwoI	GCNNNNNNNGC	6 cut(s)	388, 683, 1292, 1388, 1410, 1777
NciI	CCSGG	1 cut(s)	155
NcoI	CCATGG	1 cut(s)	687
NdeI	CATATG	2 cut(s)	511, 1288
NdeII	GATC	8 cut(s)	210, 300, 521, 714, 732, 1145, 1264, 1964
NlaIV	GGNNCC	5 cut(s)	40, 224, 302, 366, 2007
NmuCI	GTSAC	2 cut(s)	746, 931
NsiI	ATGCAT	1 cut(s)	1172
NspI	RCATGY	2 cut(s)	1186, 1468
OliI	CACNNNNGTG	1 cut(s)	1094
PagI	TCATGA	1 cut(s)	663
PciSI	GCTCTTC	1 cut(s)	432
PcsI	WCGNNNNNNNCGW	2 cut(s)	1227, 2043
PctI	GAATGC	1 cut(s)	427
PfeI	GAWTC	3 cut(s)	500, 845, 1174
PflMI	CCANNNNNTGG	2 cut(s)	1435, 2002
PkrI	GCNGC	3 cut(s)	517, 1579, 1949
PleI	GAGTC	6 cut(s)	232, 244, 841, 1529, 1865, 2050
PmaCI	CACGTG	1 cut(s)	1222
PmlI	CACGTG	1 cut(s)	1222
PpsI	GAGTC	6 cut(s)	232, 244, 841, 1529, 1865, 2050
Ppu21I	YACGTR	1 cut(s)	1222
PpuMI	RGGWCCY	1 cut(s)	365
PshBI	ATTAAT	1 cut(s)	588
Psp124BI	GAGCTC	1 cut(s)	1714
Psp1406I	AACGTT	2 cut(s)	1527, 2037
Psp5II	RGGWCCY	1 cut(s)	365
Psp6I	CCWGG	4 cut(s)	541, 1032, 1546, 1717
PspCI	CACGTG	1 cut(s)	1222
PspGI	CCWGG	4 cut(s)	541, 1032, 1546, 1717
PspN4I	GGNNCC	5 cut(s)	40, 224, 302, 366, 2007
PspPI	GGNCC	2 cut(s)	4, 365
PspPPI	RGGWCCY	1 cut(s)	365
PsuI	RGATCY	3 cut(s)	300, 521, 1264
RsaI	GTAC	3 cut(s)	957, 1135, 1752
RsaNI	GTAC	3 cut(s)	956, 1134, 1751
RseI	CAYNNNNRTG	2 cut(s)	1094, 1300
SacI	GAGCTC	1 cut(s)	1714
SapI	GCTCTTC	1 cut(s)	432
SatI	GCNGC	3 cut(s)	516, 1578, 1948
Sau3AI	GATC	8 cut(s)	210, 300, 521, 714, 732, 1145, 1264, 1964
Sau96I	GGNCC	2 cut(s)	4, 365
ScaI	AGTACT	2 cut(s)	957, 1135
SchI	GAGTC	6 cut(s)	232, 244, 842, 1530, 1865, 2051
ScrFI	CCNGG	5 cut(s)	155, 543, 1034, 1548, 1719
SduI	GDGCHC	5 cut(s)	826, 871, 1297, 1557, 1714
SfaNI	GCATC	5 cut(s)	71, 886, 1157, 1184, 1290
SfcI	CTRYAG	1 cut(s)	1258
SinI	GGWCC	2 cut(s)	4, 365
SmiMI	CAYNNNNRTG	2 cut(s)	1094, 1300
SsiI	CCGC	7 cut(s)	97, 287, 485, 516, 712, 1063, 1512
SspMI	CTAG	2 cut(s)	519, 1365
SstI	GAGCTC	1 cut(s)	1714
StyD4I	CCNGG	5 cut(s)	153, 541, 1032, 1546, 1717
StyI	CCWWGG	2 cut(s)	687, 794
TaaI	ACNGT	5 cut(s)	746, 1727, 1987, 2056, 2080
TaiI	ACGT	6 cut(s)	172, 1224, 1359, 1530, 1617, 2040
TaqI	TCGA	9 cut(s)	65, 126, 283, 1080, 1230, 1350, 1519, 1830, 1943
TatI	WGTACW	2 cut(s)	955, 1133
TauI	GCSGC	1 cut(s)	518
TfiI	GAWTC	3 cut(s)	500, 845, 1174
TscAI	CASTG	6 cut(s)	311, 751, 826, 1564, 1658, 1992
TseFI	GTSAC	2 cut(s)	746, 931
TseI	GCWGC	2 cut(s)	1577, 1947
Tsp45I	GTSAC	2 cut(s)	746, 931
TspDTI	ATGAA	9 cut(s)	36, 42, 66, 594, 786, 1350, 1433, 1650, 1894
TspGWI	ACGGA	2 cut(s)	1686, 2035
TspRI	CASTG	6 cut(s)	311, 751, 826, 1564, 1658, 1992
Van91I	CCANNNNNTGG	2 cut(s)	1435, 2002
VneI	GTGCAC	1 cut(s)	867
VpaK11BI	GGWCC	2 cut(s)	4, 365
VspI	ATTAAT	1 cut(s)	588
XapI	RAATTY	4 cut(s)	67, 581, 705, 1373
XceI	RCATGY	2 cut(s)	1186, 1468
XmiI	GTMKAC	1 cut(s)	912
XspI	CTAG	2 cut(s)	519, 1365
ZraI	GACGTC	1 cut(s)	1615
ZrmI	AGTACT	2 cut(s)	957, 1135
Zsp2I	ATGCAT	1 cut(s)	1172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.