Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0006882

Physical Location & Seq

Genomic Coordinates Forward (+)

33174787 .. 33178890

Gene Structure 4104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1271000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGCATCTAGAATGGAGCTTCAGGGAAATGGTGGAGCTTCAGGTGATGGACGTGAAGCATCGAATTCCCGCAGAGGCAACAAGAATTATTATCGTCATACTACGGAGCAGATACGACGACTTGAAGAATTTTTCAAGTACTGCTCTCACCCAGATGACAACCAACGTCAACAGCTGAGCCGGGAGTTAAGGCTTGAGCCAAGACAAATCAAGTTCTGGTTCCAAAACAAAAGAACGCAGACCCAGGCTCAAAATGAGAGCGCAGACAACACTGTTCTTCGTAAAGACAATGAAAGGATTCAATGGGAAAACTATGCAATCATAAAGGCCTTAAAGAGTGTCCTTTGCCCAACTTGCGGTGGTCCACCATTTGGAGAAGAAGCTCGGCAGCTAAGTCTGCAGAGACTTCAGCTGGAAAATGCCTATTTGAAAGAAGAGGCAAGTATTTGGAATGTAGCCAGCCTTCTTTCCAAATACATAGGGAAACCACCATCACAAATTGAATCTCTGGCGTCTGTAGTTGGATCGACGCTGGATTTATCATGTTCCACCAACCAAGGGATTATCGGAAGTCCGCCCCTTAATCTCAATCTTACCAGCCCTGCATTAGCTTACCAAATACAAGAAATCCCTGAAAGGGAAAAGACACTCATGGCGAACATTGCTGCCAGTGCTATGGAAGAACTGGTCTCACTTTTTCAGATTGGCGAGCCTTTGTGGGTCAAATCCACAGCTGATGGGCGATATTTTCTCAACCGTGACGACTATGATAAGTTATTTCCTAAAGCCAATCAATTCAAAACCTCTGGTGCGTGTGTTGAGTCTTCGAAAGATTCAGGAGTAGTGGCCATTAATGCAGCAACCTTGGTTGACATGTTCTTAGACTCTAATAAATGGGAAGAACTCTTTCCCACAATCGTTACGAAAGCAAAGACAATTGAAGTACTTGAAAGTGGAATGATGAAAAACCGGAGTGGTTGCCTACTGCTGATGTATGAACAAATGCACATTCTCTCACCTTTGGTGGCACCACGGGATTTCTACTTTCTTCGTTATTGTCAGCAGATTGAGCTAGGCACATGGGTCATTGTTGATGTTTCCCACAACTTCCCCAAAGGAAGTTCTTCAAATCAATCACAATCTTGGAGGCTTCCTTCGGGGTGTATGATCAAAGATATTTCATGCGGCTGCTCCAGGGTAACTTGGATTGAGCATGTGGAGGTTGATAAACAAGCCCATCGGCTCTACAGAGATCTTATATGTAGAAATGTTGCATATGGAGCTGAGAGATGGATCGTTACTCTTAAGAGGATGTGTGAGAGATTGGATTGCTTGATGGTCGAAGTTGAAACTACCTTGGTTATTTCGTCAGAAGGCAAGAGGAGTGTAATGAAGCTCTCTCAGAGAATGGTGAAGAACTTCTGTGGAATGCTGAGCATGGCAGGTAAAATTGACTTCCCTCAGTCGTCCGAAGTGAACAATAGTGGGGTTCGAGTCTCTGTTCGTAAGAGCACAGAAACAGGACAGCCCCATGGCATGATTGTCAGCATTGCTACTTCTCTTTGGCTTCCTCTACCGTCCCAAACCGTCTTTAGCTTCTTCAGAGATGAGAGAAATAGAGTTCAGTGGGATGTTCTGTCAAATGGAAATCCAGTGCATGAGATTGCAAACATTCCAACCGGAACGCATCCCGGAAACTGTATATCTGTCATTCGGGTACCTTTCACCCCTACCGAGAATAACATGCTGATGCTTCAAGAGAGCTACACGGACCCTTTGGGATCCTTAGTCGTATATGCTCCAGTCGACATGCCAGCTCTTAACGTAGCAGTAAGTGGCAAGGACTCTTCCAACATACCTATCCTCCCATCGGGGTTTGTGATATCGGGCGATGGTCGTGCTGAAATAACTGGGGATTCAGGACATTCCAAGGAAGGTGGTTCACTTCTTACAGTGGCCTTCCAGATATTGGTTTCCAGTCCCTCAACTTCAAAGCAGATGAACATGGAGTCGGTGGCAACTGTCAACGCTCTCATCAGTTCCACCGTTCAAAAAATCAAAGTTGCTCTCAACTGCTCGAGCTTGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

697

Amino Acids

77.48

Weight (kDa)

7.1

Isoelectric Point (pI)

49.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	28 - 80	1.8e-15	Homeodomain
START	PF01852	221 - 441	2.7e-31	START domain
PDF2_C	PF25797	457 - 692	1.6e-107	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006882)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03260 AT3G03260
fragaria_vesca	FvH4_1g27700
malus_domestica	MD09G1277500.v1.1 MD09G1277600.v1.1 MD09G1277900.v1.1 MD17G1271000.v1.1 MD17G1271100.v1.1
prunus_persica	Prupe.3G015300_v2.0.a1
pyrus_communis	pycom09g18690 pycom09g18700 pycom09g18710 pycom17g26940
rosa_chinensis	RchiOBHm_Chr3g0488861
rosa_laevigata	RLG00000022916
rosa_multiflora	Rmu_sc0001208.1_g000028
rosa_roxburghii	Rroxscaffold_6G00393800 Rroxscaffold_6G00393810
rosa_rugosa	Rorug03G0242100 Rorug03G0242200
rosa_samantha	Rh3AG290200 Rh3BG327300 Rh3BG327400 Rh3CG324700 Rh3DG323300
rosa_wichuraiana	Rw3G025720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1433
Acc65I	GGTACC	1 cut(s)	1717
AccB1I	GGYRCC	2 cut(s)	1027, 1717
AccB7I	CCANNNNNTGG	2 cut(s)	371, 1969
AccI	GTMKAC	1 cut(s)	1806
AciI	CCGC	4 cut(s)	70, 357, 575, 1185
AclWI	GGATC	4 cut(s)	532, 1301, 1776, 1789
AcoI	YGGCCR	1 cut(s)	846
AcsI	RAATTY	2 cut(s)	64, 128
AcuI	CTGAAG	4 cut(s)	5, 24, 392, 1585
AcyI	GRCGYC	1 cut(s)	512
AfaI	GTAC	3 cut(s)	140, 945, 1719
AfiI	CCNNNNNNNGG	6 cut(s)	356, 371, 558, 637, 1870, 1969
AflII	CTTAAG	1 cut(s)	1304
AflIII	ACRYGT	1 cut(s)	873
AjiI	CACGTC	1 cut(s)	53
AjnI	CCWGG	2 cut(s)	243, 1193
Alw21I	GWGCWC	1 cut(s)	1514
Alw26I	GTCTC	3 cut(s)	397, 694, 1501
AlwI	GGATC	4 cut(s)	532, 1301, 1776, 1789
Ama87I	CYCGRG	1 cut(s)	2077
AoxI	GGCC	3 cut(s)	327, 846, 1956
ApeKI	GCWGC	4 cut(s)	388, 665, 857, 1188
ApoI	RAATTY	2 cut(s)	64, 128
AseI	ATTAAT	1 cut(s)	852
Asp700I	GAANNNNTTC	4 cut(s)	297, 906, 1123, 1418
Asp718I	GGTACC	1 cut(s)	1717
AspLEI	GCGC	1 cut(s)	263
AspS9I	GGNCC	2 cut(s)	362, 1771
AsuC2I	CCSGG	2 cut(s)	182, 1692
AsuHPI	GGTGA	5 cut(s)	56, 140, 1008, 1423, 1717
AsuII	TTCGAA	1 cut(s)	827
AvaI	CYCGRG	1 cut(s)	2077
AvaII	GGWCC	2 cut(s)	362, 1771
BalI	TGGCCA	1 cut(s)	848
BamHI	GGATCC	1 cut(s)	1781
BanI	GGYRCC	2 cut(s)	1027, 1717
BarI	GAAGNNNNNNTAC	2 cut(s)	447, 479
BbsI	GAAGAC	1 cut(s)	816
Bbv12I	GWGCWC	1 cut(s)	1514
BbvI	GCAGC	4 cut(s)	400, 652, 869, 1175
BccI	CCATC	8 cut(s)	41, 499, 731, 1245, 1284, 1330, 1876, 1886
BcgI	CGANNNNNNTGC	2 cut(s)	1880, 1914
BciT130I	CCWGG	2 cut(s)	245, 1195
BclI	TGATCA	1 cut(s)	1167
BcnI	CCSGG	2 cut(s)	182, 1692
BcoDI	GTCTC	3 cut(s)	397, 694, 1501
BfaI	CTAG	2 cut(s)	9, 1073
BfmI	CTRYAG	3 cut(s)	398, 516, 1246
BfrI	CTTAAG	1 cut(s)	1304
BfuAI	ACCTGC	1 cut(s)	1433
BglII	AGATCT	1 cut(s)	1252
BisI	GCNGC	5 cut(s)	389, 666, 858, 1186, 1189
BlpI	GCTNAGC	2 cut(s)	176, 1433
BlsI	GCNGC	5 cut(s)	390, 667, 859, 1187, 1190
BmcAI	AGTACT	2 cut(s)	140, 945
Bme1390I	CCNGG	4 cut(s)	182, 245, 1195, 1692
Bme18I	GGWCC	2 cut(s)	362, 1771
BmeT110I	CYCGRG	1 cut(s)	2077
BmgBI	CACGTC	1 cut(s)	53
BmgT120I	GGNCC	2 cut(s)	362, 1771
BmiI	GGNNCC	5 cut(s)	221, 1029, 1719, 1773, 1783
BmrFI	CCNGG	4 cut(s)	182, 245, 1195, 1692
BmrI	ACTGGG	1 cut(s)	1920
BmsI	GCATC	4 cut(s)	14, 68, 1696, 1740
BmuI	ACTGGG	1 cut(s)	1920
BpiI	GAAGAC	1 cut(s)	816
BpmI	CTGGAG	2 cut(s)	1177, 1785
Bpu1102I	GCTNAGC	2 cut(s)	176, 1433
Bpu14I	TTCGAA	1 cut(s)	827
BpuEI	CTTGAG	1 cut(s)	215
BpuMI	CCSGG	2 cut(s)	182, 1692
BsaHI	GRCGYC	1 cut(s)	512
BsaI	GGTCTC	1 cut(s)	694
BsaJI	CCNNGG	8 cut(s)	243, 556, 864, 1031, 1194, 1356, 1531, 1929
BsaWI	WCCGGW	2 cut(s)	969, 1679
BsaXI	ACNNNNNCTCC	2 cut(s)	1848, 1878
Bsc4I	CCNNNNNNNGG	6 cut(s)	356, 371, 558, 637, 1870, 1969
Bse1I	ACTGG	6 cut(s)	669, 690, 1652, 1802, 1915, 1977
Bse3DI	GCAATG	2 cut(s)	660, 1548
BseBI	CCWGG	2 cut(s)	245, 1195
BseDI	CCNNGG	8 cut(s)	243, 556, 864, 1031, 1194, 1356, 1531, 1929
BseGI	GGATG	3 cut(s)	1317, 1636, 1687
BseLI	CCNNNNNNNGG	6 cut(s)	356, 371, 558, 637, 1870, 1969
BseMI	GCAATG	2 cut(s)	660, 1548
BseMII	CTCAG	5 cut(s)	167, 1275, 1415, 1424, 1475
BseNI	ACTGG	6 cut(s)	669, 690, 1652, 1802, 1915, 1977
BseRI	GAGGAG	1 cut(s)	1396
BseXI	GCAGC	4 cut(s)	400, 652, 869, 1175
BshFI	GGCC	3 cut(s)	329, 848, 1958
BshNI	GGYRCC	2 cut(s)	1027, 1717
BsiHKAI	GWGCWC	1 cut(s)	1514
BsiHKCI	CYCGRG	1 cut(s)	2077
BsiSI	CCGG	4 cut(s)	181, 970, 1680, 1692
BslFI	GGGAC	2 cut(s)	1564, 1965
BslI	CCNNNNNNNGG	6 cut(s)	356, 371, 558, 637, 1870, 1969
BsmAI	GTCTC	3 cut(s)	397, 694, 1501
BsmFI	GGGAC	2 cut(s)	1564, 1965
BsmI	GAATGC	1 cut(s)	1434
BsnI	GGCC	3 cut(s)	329, 848, 1958
Bso31I	GGTCTC	1 cut(s)	694
BsoBI	CYCGRG	1 cut(s)	2077
Bsp119I	TTCGAA	1 cut(s)	827
Bsp1286I	GDGCHC	1 cut(s)	1514
Bsp143I	GATC	5 cut(s)	524, 1167, 1252, 1293, 1781
Bsp1720I	GCTNAGC	2 cut(s)	176, 1433
Bsp19I	CCATGG	1 cut(s)	1531
BspACI	CCGC	4 cut(s)	70, 357, 575, 1185
BspANI	GGCC	3 cut(s)	329, 848, 1958
BspCNI	CTCAG	5 cut(s)	168, 1276, 1414, 1425, 1474
BspLI	GGNNCC	5 cut(s)	221, 1029, 1719, 1773, 1783
BspMAI	CTGCAG	1 cut(s)	402
BspMI	ACCTGC	1 cut(s)	1433
BspPI	GGATC	4 cut(s)	532, 1301, 1776, 1789
BspT104I	TTCGAA	1 cut(s)	827
BspT107I	GGYRCC	2 cut(s)	1027, 1717
BspTI	CTTAAG	1 cut(s)	1304
BspTNI	GGTCTC	1 cut(s)	694
BsrDI	GCAATG	2 cut(s)	660, 1548
BsrI	ACTGG	6 cut(s)	669, 690, 1652, 1802, 1915, 1977
BssECI	CCNNGG	8 cut(s)	243, 556, 864, 1031, 1194, 1356, 1531, 1929
BssMI	GATC	5 cut(s)	524, 1167, 1252, 1293, 1781
BssNI	GRCGYC	1 cut(s)	512
BssT1I	CCWWGG	5 cut(s)	556, 864, 1356, 1531, 1929
Bst2UI	CCWGG	2 cut(s)	245, 1195
Bst4CI	ACNGT	8 cut(s)	274, 758, 1578, 1588, 1700, 1954, 2023, 2047
Bst6I	CTCTTC	2 cut(s)	429, 1852
BstACI	GRCGYC	1 cut(s)	512
BstAFI	CTTAAG	1 cut(s)	1304
BstBI	TTCGAA	1 cut(s)	827
BstC8I	GCNNGC	3 cut(s)	460, 710, 1815
BstDEI	CTNAG	8 cut(s)	176, 392, 880, 1284, 1401, 1433, 1461, 1786
BstDSI	CCRYGG	2 cut(s)	1031, 1531
BstF5I	GGATG	3 cut(s)	1317, 1636, 1687
BstHHI	GCGC	1 cut(s)	263
BstKTI	GATC	5 cut(s)	527, 1170, 1255, 1296, 1784
BstMAI	GTCTC	3 cut(s)	397, 694, 1501
BstMBI	GATC	5 cut(s)	524, 1167, 1252, 1293, 1781
BstMWI	GCNNNNNNNGC	7 cut(s)	354, 397, 662, 671, 854, 1069, 1280
BstNI	CCWGG	2 cut(s)	245, 1195
BstNSI	RCATGY	4 cut(s)	877, 1217, 1747, 1813
BstSCI	CCNGG	4 cut(s)	180, 243, 1193, 1690
BstSFI	CTRYAG	3 cut(s)	398, 516, 1246
BstV1I	GCAGC	4 cut(s)	400, 652, 869, 1175
BstV2I	GAAGAC	1 cut(s)	816
BstX2I	RGATCY	2 cut(s)	1252, 1781
BstXI	CCANNNNNNTGG	1 cut(s)	676
BstYI	RGATCY	2 cut(s)	1252, 1781
BsuRI	GGCC	3 cut(s)	329, 848, 1958
BtgI	CCRYGG	2 cut(s)	1031, 1531
BtgZI	GCGATG	1 cut(s)	1905
BtrI	CACGTC	1 cut(s)	53
BtsCI	GGATG	3 cut(s)	1317, 1636, 1687
BtsIMutI	CAGTG	5 cut(s)	270, 676, 1631, 1659, 1959
BveI	ACCTGC	1 cut(s)	1433
Cac8I	GCNNGC	3 cut(s)	460, 710, 1815
CfoI	GCGC	1 cut(s)	263
Cfr13I	GGNCC	2 cut(s)	362, 1771
CseI	GACGC	2 cut(s)	501, 538
Csp6I	GTAC	3 cut(s)	139, 944, 1718
CspCI	CAANNNNNGTGG	2 cut(s)	1918, 1953
CviQI	GTAC	3 cut(s)	139, 944, 1718
DdeI	CTNAG	8 cut(s)	176, 392, 880, 1284, 1401, 1433, 1461, 1786
DpnI	GATC	5 cut(s)	526, 1169, 1254, 1295, 1783
DpnII	GATC	5 cut(s)	524, 1167, 1252, 1293, 1781
EaeI	YGGCCR	1 cut(s)	846
Eam1104I	CTCTTC	2 cut(s)	429, 1852
EarI	CTCTTC	2 cut(s)	429, 1852
EciI	GGCGGA	1 cut(s)	564
Eco130I	CCWWGG	5 cut(s)	556, 864, 1356, 1531, 1929
Eco147I	AGGCCT	1 cut(s)	329
Eco31I	GGTCTC	1 cut(s)	694
Eco32I	GATATC	1 cut(s)	1884
Eco47I	GGWCC	2 cut(s)	362, 1771
Eco57I	CTGAAG	4 cut(s)	5, 24, 392, 1585
Eco88I	CYCGRG	1 cut(s)	2077
EcoRI	GAATTC	1 cut(s)	64
EcoRII	CCWGG	2 cut(s)	243, 1193
EcoRV	GATATC	1 cut(s)	1884
EcoT14I	CCWWGG	5 cut(s)	556, 864, 1356, 1531, 1929
ErhI	CCWWGG	5 cut(s)	556, 864, 1356, 1531, 1929
FaqI	GGGAC	2 cut(s)	1564, 1965
FauI	CCCGC	1 cut(s)	77
FauNDI	CATATG	1 cut(s)	1276
FbaI	TGATCA	1 cut(s)	1167
FblI	GTMKAC	1 cut(s)	1806
Fnu4HI	GCNGC	5 cut(s)	389, 666, 858, 1186, 1189
FokI	GGATG	3 cut(s)	1324, 1643, 1674
Fsp4HI	GCNGC	5 cut(s)	389, 666, 858, 1186, 1189
FspBI	CTAG	2 cut(s)	9, 1073
GlaI	GCGC	1 cut(s)	262
GluI	GCNGC	5 cut(s)	389, 666, 858, 1186, 1189
GsuI	CTGGAG	2 cut(s)	1177, 1785
HaeIII	GGCC	3 cut(s)	329, 848, 1958
HapII	CCGG	4 cut(s)	181, 970, 1680, 1692
HgaI	GACGC	2 cut(s)	501, 538
HhaI	GCGC	1 cut(s)	263
Hin1I	GRCGYC	1 cut(s)	512
Hin6I	GCGC	1 cut(s)	261
HinP1I	GCGC	1 cut(s)	261
HincII	GTYRAC	4 cut(s)	170, 871, 1807, 2026
HindII	GTYRAC	4 cut(s)	170, 871, 1807, 2026
HinfI	GANTC	9 cut(s)	298, 503, 821, 833, 884, 1494, 1844, 1916, 2009
HpaII	CCGG	4 cut(s)	181, 970, 1680, 1692
HphI	GGTGA	5 cut(s)	56, 140, 1008, 1423, 1717
Hpy166II	GTNNAC	7 cut(s)	170, 365, 871, 1477, 1807, 1943, 2026
Hpy188I	TCNGA	6 cut(s)	569, 702, 1372, 1404, 1471, 1604
Hpy188III	TCNNGA	5 cut(s)	9, 837, 1757, 1920, 1963
Hpy8I	GTNNAC	7 cut(s)	170, 365, 871, 1477, 1807, 1943, 2026
Hpy99I	CGWCG	2 cut(s)	120, 532
HpyAV	CCTTC	5 cut(s)	473, 1164, 1367, 1928, 1969
HpyCH4III	ACNGT	8 cut(s)	274, 758, 1578, 1588, 1700, 1954, 2023, 2047
HpyCH4IV	ACGT	3 cut(s)	52, 166, 1824
HpyCH4V	TGCA	8 cut(s)	317, 400, 605, 857, 1006, 1274, 1657, 1667
HpyF10VI	GCNNNNNNNGC	7 cut(s)	354, 397, 662, 671, 854, 1069, 1280
HpyF3I	CTNAG	8 cut(s)	176, 392, 880, 1284, 1401, 1433, 1461, 1786
HpySE526I	ACGT	3 cut(s)	52, 166, 1824
Hsp92I	GRCGYC	1 cut(s)	512
HspAI	GCGC	1 cut(s)	261
KpnI	GGTACC	1 cut(s)	1721
Ksp22I	TGATCA	1 cut(s)	1167
Kzo9I	GATC	5 cut(s)	524, 1167, 1252, 1293, 1781
LmnI	GCTCC	6 cut(s)	16, 35, 106, 1196, 1280, 1804
Lsp1109I	GCAGC	4 cut(s)	400, 652, 869, 1175
LweI	GCATC	4 cut(s)	14, 68, 1696, 1740
MaeI	CTAG	2 cut(s)	9, 1073
MaeII	ACGT	3 cut(s)	52, 166, 1824
MaeIII	GTNAC	4 cut(s)	758, 919, 1198, 1297
MalI	GATC	5 cut(s)	526, 1169, 1254, 1295, 1783
MboI	GATC	5 cut(s)	524, 1167, 1252, 1293, 1781
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	2 cut(s)	1252, 1781
MhlI	GDGCHC	1 cut(s)	1514
MlsI	TGGCCA	1 cut(s)	848
MluCI	AATT	7 cut(s)	64, 85, 128, 498, 794, 936, 1449
MluNI	TGGCCA	1 cut(s)	848
MlyI	GAGTC	5 cut(s)	830, 878, 1503, 1838, 2018
MmeI	TCCRAC	3 cut(s)	502, 1700, 1875
Mox20I	TGGCCA	1 cut(s)	848
MroXI	GAANNNNTTC	4 cut(s)	297, 906, 1123, 1418
MscI	TGGCCA	1 cut(s)	848
MseI	TTAA	7 cut(s)	188, 332, 582, 852, 1305, 1821, 2089
MslI	CAYNNNNRTG	2 cut(s)	153, 1748
Msp20I	TGGCCA	1 cut(s)	848
MspA1I	CMGCKG	3 cut(s)	175, 412, 734
MspCI	CTTAAG	1 cut(s)	1304
MspI	CCGG	4 cut(s)	181, 970, 1680, 1692
MspR9I	CCNGG	4 cut(s)	182, 245, 1195, 1692
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	1 cut(s)	1434
MvaI	CCWGG	2 cut(s)	245, 1195
MwoI	GCNNNNNNNGC	7 cut(s)	354, 397, 662, 671, 854, 1069, 1280
NciI	CCSGG	2 cut(s)	182, 1692
NcoI	CCATGG	1 cut(s)	1531
NdeI	CATATG	1 cut(s)	1276
NdeII	GATC	5 cut(s)	524, 1167, 1252, 1293, 1781
NlaIV	GGNNCC	5 cut(s)	221, 1029, 1719, 1773, 1783
NmeAIII	GCCGAG	1 cut(s)	364
NmuCI	GTSAC	1 cut(s)	758
NspI	RCATGY	4 cut(s)	877, 1217, 1747, 1813
NspV	TTCGAA	1 cut(s)	827
PaeR7I	CTCGAG	1 cut(s)	2077
PceI	AGGCCT	1 cut(s)	329
PciI	ACATGT	1 cut(s)	873
PctI	GAATGC	1 cut(s)	1434
PdmI	GAANNNNTTC	4 cut(s)	297, 906, 1123, 1418
PfeI	GAWTC	4 cut(s)	298, 503, 833, 1916
PflMI	CCANNNNNTGG	2 cut(s)	371, 1969
PfoI	TCCNGGA	1 cut(s)	1690
PkrI	GCNGC	5 cut(s)	390, 667, 859, 1187, 1190
PleI	GAGTC	5 cut(s)	829, 878, 1502, 1838, 2017
PpsI	GAGTC	5 cut(s)	829, 878, 1502, 1838, 2017
PscI	ACATGT	1 cut(s)	873
PshBI	ATTAAT	1 cut(s)	852
Psp6I	CCWGG	2 cut(s)	243, 1193
PspGI	CCWGG	2 cut(s)	243, 1193
PspN4I	GGNNCC	5 cut(s)	221, 1029, 1719, 1773, 1783
PspPI	GGNCC	2 cut(s)	362, 1771
PspXI	VCTCGAGB	1 cut(s)	2077
PstI	CTGCAG	1 cut(s)	402
PsuI	RGATCY	2 cut(s)	1252, 1781
PvuII	CAGCTG	3 cut(s)	175, 412, 734
RsaI	GTAC	3 cut(s)	140, 945, 1719
RsaNI	GTAC	3 cut(s)	139, 944, 1718
RseI	CAYNNNNRTG	2 cut(s)	153, 1748
SalI	GTCGAC	1 cut(s)	1805
SaqAI	TTAA	7 cut(s)	188, 332, 582, 852, 1305, 1821, 2089
SatI	GCNGC	5 cut(s)	389, 666, 858, 1186, 1189
Sau3AI	GATC	5 cut(s)	524, 1167, 1252, 1293, 1781
Sau96I	GGNCC	2 cut(s)	362, 1771
ScaI	AGTACT	2 cut(s)	140, 945
SchI	GAGTC	5 cut(s)	830, 878, 1503, 1838, 2018
ScrFI	CCNGG	4 cut(s)	182, 245, 1195, 1692
SduI	GDGCHC	1 cut(s)	1514
SfaNI	GCATC	4 cut(s)	14, 68, 1696, 1740
SfcI	CTRYAG	3 cut(s)	398, 516, 1246
Sfr274I	CTCGAG	1 cut(s)	2077
SfuI	TTCGAA	1 cut(s)	827
SinI	GGWCC	2 cut(s)	362, 1771
SlaI	CTCGAG	1 cut(s)	2077
SmiMI	CAYNNNNRTG	2 cut(s)	153, 1748
SmlI	CTYRAG	3 cut(s)	194, 1304, 2077
SmoI	CTYRAG	3 cut(s)	194, 1304, 2077
Sse9I	AATT	7 cut(s)	64, 85, 128, 498, 794, 936, 1449
SseBI	AGGCCT	1 cut(s)	329
SsiI	CCGC	4 cut(s)	70, 357, 575, 1185
SspMI	CTAG	2 cut(s)	9, 1073
StuI	AGGCCT	1 cut(s)	329
StyD4I	CCNGG	4 cut(s)	180, 243, 1193, 1690
StyI	CCWWGG	5 cut(s)	556, 864, 1356, 1531, 1929
TaaI	ACNGT	8 cut(s)	274, 758, 1578, 1588, 1700, 1954, 2023, 2047
TaiI	ACGT	3 cut(s)	55, 169, 1827
TaqI	TCGA	7 cut(s)	62, 527, 827, 1341, 1492, 1806, 2078
TasI	AATT	7 cut(s)	64, 85, 128, 498, 794, 936, 1449
TatI	WGTACW	2 cut(s)	138, 943
TauI	GCSGC	1 cut(s)	1188
TfiI	GAWTC	4 cut(s)	298, 503, 833, 1916
Tru1I	TTAA	7 cut(s)	188, 332, 582, 852, 1305, 1821, 2089
Tru9I	TTAA	7 cut(s)	188, 332, 582, 852, 1305, 1821, 2089
TscAI	CASTG	5 cut(s)	277, 676, 1631, 1659, 1959
TseFI	GTSAC	1 cut(s)	758
TseI	GCWGC	4 cut(s)	388, 665, 857, 1188
Tsp45I	GTSAC	1 cut(s)	758
TspDTI	ATGAA	6 cut(s)	306, 977, 1011, 1170, 1406, 2015
TspGWI	ACGGA	2 cut(s)	119, 1784
TspRI	CASTG	5 cut(s)	277, 676, 1631, 1659, 1959
Van91I	CCANNNNNTGG	2 cut(s)	371, 1969
Vha464I	CTTAAG	1 cut(s)	1304
VpaK11BI	GGWCC	2 cut(s)	362, 1771
VspI	ATTAAT	1 cut(s)	852
XapI	RAATTY	2 cut(s)	64, 128
XbaI	TCTAGA	1 cut(s)	8
XceI	RCATGY	4 cut(s)	877, 1217, 1747, 1813
XhoI	CTCGAG	1 cut(s)	2077
XmiI	GTMKAC	1 cut(s)	1806
XmnI	GAANNNNTTC	4 cut(s)	297, 906, 1123, 1418
XspI	CTAG	2 cut(s)	9, 1073
ZrmI	AGTACT	2 cut(s)	140, 945

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.