Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0002845

Physical Location & Seq

Genomic Coordinates Forward (+)

22283016 .. 22290057

Gene Structure 7042 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1138100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGAGCAACTCCGGGAAGCTCAACTCCTCAAGCTCCGAATTGGACCTCGATCGTCCCAACCTCGAAGATTACCTCCCTTCCGGCACCTCCATCCAGCAGGAACCTCACGGCAAGCTTCGCCTGCGTGATTTGCTCGACATATCTCCCACCCTAACCGAGGCTGCTGGTGCCATTATCGATGACTCGTTTACAAGGTGCTTTAAGTCCAATCCTCCAGAGCCGTGGAACTGGAATGTGTATCTGTTCCCTTTGTGGTGTTTCGGAGTGGTGGTTCGATACTTCATTCTGTTTCCTGCGAGGGTTCTTGTTTTGACGATTGGATGGATAATTTTCCTATCATCCTTCATTCCAGTGCACTTCCTGCTGAAAGGCCATGATAAATTGAGAAAAAATTTAGAGAGGCTCTTGGTAGAGTTAATTTGTAGCTTCTTTGTTGCATCTTGGACTGGGGTTGTGAAGTACCATGGGCCACGGCCCAGCATGCGGCCGAAGCAAGTCTTTGTGGCCAATCATACATCCATGATTGATTTCATCATCTTAGAACAAATGACTGCATTTGCTGTAATTATGCAAAAGCATCCTGGATGGGTTGGATTGTTGCAAAGCACTATTTTGGAGAGTGTAGGGTGCATTTGGTTCAATCGTTCAGAGGCAAAGGATCGGGAAATTGTAGCAAAGAAATTAAGGGAACATGTAATTGGGGCAGACAATAACCCTCTCCTTATATTTCCTGAAGGAACGTGTGTAAACAATCACTACACTGTTATGTTTAAGAAGGGTGCATTTGAGCTTGGCTGCTCAGTTTGCCCCGTTGCAATCAAGTACAACAAAATTTTCGTTGATGCTTTTTGGAATAGCAAAAAGCAGTCCTTCACAATGCATCTGCTACAACTTATGACGTCGTGGGCTGTTGTTTGTGATGTGTGGTATTTGGAGCCCCAAAACATAAGGCCTGGGGAGACCCCCATTGAATTTGCCGAGAGGGTCAGGGAAATAATTTCTGTTCGAGCAGGACTGAAGATGGTTCCGTGGGACGGGTATCTGAAATACTCTCGGCCCAGCCCAAAGCACAGAGAGAGAAAGCAACAATGCTTTGCTGAGTCTATGCTCCGACTCCTAGAGGAAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004366 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006072 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006638 GO:0006639 GO:0006641 GO:0006651 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009555 GO:0009791 GO:0009987 GO:0010152 GO:0010154 GO:0010344 GO:0010876 GO:0012505 GO:0016020 GO:0016053 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0019637 GO:0019752 GO:0019915 GO:0021700 GO:0022414 GO:0031984 GO:0032501 GO:0032502 GO:0032787 GO:0033036 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043621 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046339 GO:0046394 GO:0046460 GO:0046463 GO:0046486 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051235 GO:0052646 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0072330 GO:0098827 GO:1901135 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

377

Amino Acids

43.26

Weight (kDa)

8.87

Isoelectric Point (pI)

43.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyltransferase	PF01553	152 - 274	4.3e-26	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002845)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60620
fragaria_vesca	FvH4_2g16380 FvH4_2g16380 FvH4_5g27680 FvH4_5g27680 FvH4_5g27680 FvH4_5g27680 FvH4_5g27680 FvH4_5g27680 FvH4_5g27680 FvH4_5g27680 FvH4_5g27680 FvH4_5g27680
malus_domestica	MD00G1083900.v1.1 MD10G1138100.v1.1
prunus_persica	Prupe.8G176600_v2.0.a1 Prupe.8G176600_v2.0.a1 Prupe.8G176600_v2.0.a1
pyrus_communis	pycom05g12970 pycom10g11750
rosa_chinensis	RchiOBHm_Chr6g0280151
rosa_laevigata	RLG00000013081 RLG00000036589
rosa_multiflora	Rmu_sc0002826.1_g000032
rosa_roxburghii	Rroxscaffold_7G00188350
rosa_rugosa	Rorug01G0184800 Rorug04G0199200 Rorug06G0130200 Rorug06G0130300 Rorug06G0215900 Rorug07G0231300
rosa_samantha	Rh2CG447400 Rh6AG240600 Rh6BG202200 Rh6BG202300 Rh6BG244300 Rh6CG245900 Rh6DG237000
rosa_wichuraiana	Rw6G020960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	902
AccB1I	GGYRCC	2 cut(s)	83, 167
AciI	CCGC	1 cut(s)	484
AclWI	GGATC	1 cut(s)	666
AcoI	YGGCCR	2 cut(s)	485, 504
AcsI	RAATTY	3 cut(s)	391, 831, 971
AcuI	CTGAAG	2 cut(s)	753, 1037
AcyI	GRCGYC	1 cut(s)	899
AfaI	GTAC	2 cut(s)	461, 824
AfiI	CCNNNNNNNGG	3 cut(s)	157, 483, 1034
AflIII	ACRYGT	2 cut(s)	691, 740
AgsI	TTSAA	2 cut(s)	640, 971
AjnI	CCWGG	2 cut(s)	580, 952
AjuI	GAANNNNNNNTTGG	2 cut(s)	681, 713
AloI	GAACNNNNNNTCC	2 cut(s)	255, 287
AluBI	AGCT	5 cut(s)	19, 33, 115, 426, 790
AluI	AGCT	5 cut(s)	19, 33, 115, 426, 790
Alw21I	GWGCWC	1 cut(s)	357
Alw26I	GTCTC	1 cut(s)	953
Alw44I	GTGCAC	1 cut(s)	353
AlwI	GGATC	1 cut(s)	666
AoxI	GGCC	7 cut(s)	370, 467, 473, 485, 504, 950, 1055
ApaLI	GTGCAC	1 cut(s)	353
ApeKI	GCWGC	2 cut(s)	161, 795
ApoI	RAATTY	3 cut(s)	391, 831, 971
AspS9I	GGNCC	4 cut(s)	43, 467, 474, 1056
AsuC2I	CCSGG	1 cut(s)	13
AvaII	GGWCC	1 cut(s)	43
BaeGI	GKGCMC	1 cut(s)	357
BalI	TGGCCA	1 cut(s)	506
BanI	GGYRCC	2 cut(s)	83, 167
BanII	GRGCYC	1 cut(s)	939
Bbv12I	GWGCWC	1 cut(s)	357
BbvI	GCAGC	2 cut(s)	148, 782
BccI	CCATC	4 cut(s)	98, 315, 579, 1015
BceAI	ACGGC	3 cut(s)	124, 205, 488
BciT130I	CCWGG	2 cut(s)	582, 954
BcnI	CCSGG	1 cut(s)	13
BcoDI	GTCTC	1 cut(s)	953
BfaI	CTAG	1 cut(s)	1118
BisI	GCNGC	3 cut(s)	162, 485, 796
BlsI	GCNGC	3 cut(s)	163, 486, 797
Bme1390I	CCNGG	3 cut(s)	13, 582, 954
Bme18I	GGWCC	1 cut(s)	43
BmgT120I	GGNCC	4 cut(s)	43, 467, 474, 1056
BmiI	GGNNCC	5 cut(s)	85, 102, 169, 936, 1026
BmrFI	CCNGG	3 cut(s)	13, 582, 954
BmrI	ACTGGG	1 cut(s)	456
BmsI	GCATC	4 cut(s)	446, 586, 832, 889
BmuI	ACTGGG	1 cut(s)	456
BpmI	CTGGAG	1 cut(s)	198
BpuEI	CTTGAG	1 cut(s)	13
BpuMI	CCSGG	1 cut(s)	13
Bsa29I	ATCGAT	1 cut(s)	177
BsaHI	GRCGYC	1 cut(s)	899
BsaI	GGTCTC	1 cut(s)	953
BsaJI	CCNNGG	6 cut(s)	156, 221, 463, 470, 953, 1028
BsaXI	ACNNNNNCTCC	2 cut(s)	255, 285
Bsc4I	CCNNNNNNNGG	3 cut(s)	157, 483, 1034
Bse1I	ACTGG	3 cut(s)	233, 350, 451
BseBI	CCWGG	2 cut(s)	582, 954
BseCI	ATCGAT	1 cut(s)	177
BseDI	CCNNGG	6 cut(s)	156, 221, 463, 470, 953, 1028
BseGI	GGATG	6 cut(s)	90, 326, 338, 515, 577, 590
BseLI	CCNNNNNNNGG	3 cut(s)	157, 483, 1034
BseMII	CTCAG	2 cut(s)	813, 1089
BseNI	ACTGG	3 cut(s)	233, 350, 451
BseRI	GAGGAG	1 cut(s)	16
BseSI	GKGCMC	1 cut(s)	357
BseX3I	CGGCCG	1 cut(s)	485
BseXI	GCAGC	2 cut(s)	148, 782
BseYI	CCCAGC	2 cut(s)	476, 1058
Bsh1285I	CGRYCG	2 cut(s)	52, 488
BshFI	GGCC	7 cut(s)	372, 469, 475, 487, 506, 952, 1057
BshNI	GGYRCC	2 cut(s)	83, 167
BshVI	ATCGAT	1 cut(s)	177
BsiEI	CGRYCG	2 cut(s)	52, 488
BsiHKAI	GWGCWC	1 cut(s)	357
BsiSI	CCGG	2 cut(s)	12, 81
BslFI	GGGAC	2 cut(s)	39, 1046
BslI	CCNNNNNNNGG	3 cut(s)	157, 483, 1034
BsmAI	GTCTC	1 cut(s)	953
BsmFI	GGGAC	2 cut(s)	39, 1046
BsnI	GGCC	7 cut(s)	372, 469, 475, 487, 506, 952, 1057
Bso31I	GGTCTC	1 cut(s)	953
Bsp1286I	GDGCHC	2 cut(s)	357, 939
Bsp143I	GATC	2 cut(s)	49, 658
Bsp19I	CCATGG	1 cut(s)	463
BspACI	CCGC	1 cut(s)	484
BspANI	GGCC	7 cut(s)	372, 469, 475, 487, 506, 952, 1057
BspCNI	CTCAG	2 cut(s)	812, 1090
BspDI	ATCGAT	1 cut(s)	177
BspLI	GGNNCC	5 cut(s)	85, 102, 169, 936, 1026
BspPI	GGATC	1 cut(s)	666
BspT107I	GGYRCC	2 cut(s)	83, 167
BspTNI	GGTCTC	1 cut(s)	953
BsrI	ACTGG	3 cut(s)	233, 350, 451
BssECI	CCNNGG	6 cut(s)	156, 221, 463, 470, 953, 1028
BssMI	GATC	2 cut(s)	49, 658
BssNI	GRCGYC	1 cut(s)	899
BssT1I	CCWWGG	1 cut(s)	463
Bst2UI	CCWGG	2 cut(s)	582, 954
Bst4CI	ACNGT	1 cut(s)	763
BstACI	GRCGYC	1 cut(s)	899
BstAPI	GCANNNNNTGC	1 cut(s)	361
BstC8I	GCNNGC	3 cut(s)	113, 122, 482
BstDEI	CTNAG	3 cut(s)	538, 799, 1098
BstDSI	CCRYGG	4 cut(s)	221, 463, 470, 1028
BstENI	CCTNNNNNAGG	1 cut(s)	155
BstF5I	GGATG	6 cut(s)	90, 326, 338, 515, 577, 590
BstKTI	GATC	2 cut(s)	52, 661
BstMAI	GTCTC	1 cut(s)	953
BstMBI	GATC	2 cut(s)	49, 658
BstMCI	CGRYCG	2 cut(s)	52, 488
BstMWI	GCNNNNNNNGC	8 cut(s)	117, 121, 130, 167, 361, 481, 490, 804
BstNI	CCWGG	2 cut(s)	582, 954
BstNSI	RCATGY	2 cut(s)	484, 695
BstSCI	CCNGG	3 cut(s)	11, 580, 952
BstSLI	GKGCMC	1 cut(s)	357
BstV1I	GCAGC	2 cut(s)	148, 782
BstXI	CCANNNNNNTGG	1 cut(s)	222
BstZI	CGGCCG	1 cut(s)	485
Bsu15I	ATCGAT	1 cut(s)	177
BsuRI	GGCC	7 cut(s)	372, 469, 475, 487, 506, 952, 1057
BsuTUI	ATCGAT	1 cut(s)	177
BtgI	CCRYGG	4 cut(s)	221, 463, 470, 1028
BtsCI	GGATG	6 cut(s)	90, 326, 338, 515, 577, 590
BtsIMutI	CAGTG	2 cut(s)	357, 759
Cac8I	GCNNGC	3 cut(s)	113, 122, 482
Cfr13I	GGNCC	4 cut(s)	43, 467, 474, 1056
ClaI	ATCGAT	1 cut(s)	177
Csp6I	GTAC	2 cut(s)	460, 823
CviAII	CATG	5 cut(s)	374, 464, 481, 520, 692
CviQI	GTAC	2 cut(s)	460, 823
DdeI	CTNAG	3 cut(s)	538, 799, 1098
DpnI	GATC	2 cut(s)	51, 660
DpnII	GATC	2 cut(s)	49, 658
EaeI	YGGCCR	2 cut(s)	485, 504
EagI	CGGCCG	1 cut(s)	485
EclXI	CGGCCG	1 cut(s)	485
Eco130I	CCWWGG	1 cut(s)	463
Eco147I	AGGCCT	1 cut(s)	952
Eco24I	GRGCYC	1 cut(s)	939
Eco31I	GGTCTC	1 cut(s)	953
Eco47I	GGWCC	1 cut(s)	43
Eco52I	CGGCCG	1 cut(s)	485
Eco57I	CTGAAG	2 cut(s)	753, 1037
EcoNI	CCTNNNNNAGG	1 cut(s)	155
EcoRII	CCWGG	2 cut(s)	580, 952
EcoT14I	CCWWGG	1 cut(s)	463
EcoT22I	ATGCAT	1 cut(s)	882
EcoT38I	GRGCYC	1 cut(s)	939
ErhI	CCWWGG	1 cut(s)	463
FaeI	CATG	5 cut(s)	377, 467, 484, 523, 695
FalI	AAGNNNNNCTT	4 cut(s)	482, 514, 854, 886
FaqI	GGGAC	2 cut(s)	39, 1046
FatI	CATG	5 cut(s)	373, 463, 480, 519, 691
Fnu4HI	GCNGC	3 cut(s)	162, 485, 796
FokI	GGATG	6 cut(s)	77, 325, 333, 502, 564, 597
FriOI	GRGCYC	1 cut(s)	939
Fsp4HI	GCNGC	3 cut(s)	162, 485, 796
FspBI	CTAG	1 cut(s)	1118
GluI	GCNGC	3 cut(s)	162, 485, 796
GsaI	CCCAGC	2 cut(s)	480, 1062
GsuI	CTGGAG	1 cut(s)	198
HaeIII	GGCC	7 cut(s)	372, 469, 475, 487, 506, 952, 1057
HapII	CCGG	2 cut(s)	12, 81
Hin1I	GRCGYC	1 cut(s)	899
Hin1II	CATG	5 cut(s)	377, 467, 484, 523, 695
HindIII	AAGCTT	1 cut(s)	113
HinfI	GANTC	3 cut(s)	182, 1100, 1113
HpaII	CCGG	2 cut(s)	12, 81
Hpy166II	GTNNAC	3 cut(s)	189, 355, 748
Hpy188I	TCNGA	5 cut(s)	37, 263, 649, 1044, 1112
Hpy188III	TCNNGA	3 cut(s)	215, 662, 731
Hpy8I	GTNNAC	3 cut(s)	189, 355, 748
Hpy99I	CGWCG	1 cut(s)	904
HpyAV	CCTTC	5 cut(s)	87, 352, 728, 769, 880
HpyCH4III	ACNGT	1 cut(s)	763
HpyCH4IV	ACGT	2 cut(s)	740, 899
HpyCH4V	TGCA	9 cut(s)	355, 437, 554, 571, 601, 630, 782, 815, 880
HpyF10VI	GCNNNNNNNGC	8 cut(s)	117, 121, 130, 167, 361, 481, 490, 804
HpyF3I	CTNAG	3 cut(s)	538, 799, 1098
HpySE526I	ACGT	2 cut(s)	740, 899
Hsp92I	GRCGYC	1 cut(s)	899
Hsp92II	CATG	5 cut(s)	377, 467, 484, 523, 695
Kzo9I	GATC	2 cut(s)	49, 658
LmnI	GCTCC	3 cut(s)	38, 934, 1113
Lsp1109I	GCAGC	2 cut(s)	148, 782
LweI	GCATC	4 cut(s)	446, 586, 832, 889
MaeI	CTAG	1 cut(s)	1118
MaeII	ACGT	2 cut(s)	740, 899
MalI	GATC	2 cut(s)	51, 660
MboI	GATC	2 cut(s)	49, 658
MboII	GAAGA	2 cut(s)	77, 1030
MhlI	GDGCHC	2 cut(s)	357, 939
MlsI	TGGCCA	1 cut(s)	506
MluNI	TGGCCA	1 cut(s)	506
MlyI	GAGTC	3 cut(s)	176, 1107, 1109
MmeI	TCCRAC	1 cut(s)	571
Mox20I	TGGCCA	1 cut(s)	506
Mph1103I	ATGCAT	1 cut(s)	882
MscI	TGGCCA	1 cut(s)	506
MseI	TTAA	4 cut(s)	201, 416, 683, 771
MslI	CAYNNNNRTG	2 cut(s)	350, 764
Msp20I	TGGCCA	1 cut(s)	506
MspI	CCGG	2 cut(s)	12, 81
MspR9I	CCNGG	3 cut(s)	13, 582, 954
MvaI	CCWGG	2 cut(s)	582, 954
MwoI	GCNNNNNNNGC	8 cut(s)	117, 121, 130, 167, 361, 481, 490, 804
NciI	CCSGG	1 cut(s)	13
NcoI	CCATGG	1 cut(s)	463
NdeII	GATC	2 cut(s)	49, 658
NlaIII	CATG	5 cut(s)	377, 467, 484, 523, 695
NlaIV	GGNNCC	5 cut(s)	85, 102, 169, 936, 1026
NmeAIII	GCCGAG	2 cut(s)	1003, 1033
NsiI	ATGCAT	1 cut(s)	882
NspI	RCATGY	2 cut(s)	484, 695
PaeI	GCATGC	1 cut(s)	484
PceI	AGGCCT	1 cut(s)	952
PciI	ACATGT	1 cut(s)	691
PfoI	TCCNGGA	2 cut(s)	11, 580
PkrI	GCNGC	3 cut(s)	163, 486, 797
Ple19I	CGATCG	1 cut(s)	52
PleI	GAGTC	3 cut(s)	176, 1107, 1108
PpsI	GAGTC	3 cut(s)	176, 1107, 1108
PscI	ACATGT	1 cut(s)	691
Psp6I	CCWGG	2 cut(s)	580, 952
PspFI	CCCAGC	2 cut(s)	476, 1058
PspGI	CCWGG	2 cut(s)	580, 952
PspN4I	GGNNCC	5 cut(s)	85, 102, 169, 936, 1026
PspPI	GGNCC	4 cut(s)	43, 467, 474, 1056
PvuI	CGATCG	1 cut(s)	52
RsaI	GTAC	2 cut(s)	461, 824
RsaNI	GTAC	2 cut(s)	460, 823
RseI	CAYNNNNRTG	2 cut(s)	350, 764
SaqAI	TTAA	4 cut(s)	201, 416, 683, 771
SatI	GCNGC	3 cut(s)	162, 485, 796
Sau3AI	GATC	2 cut(s)	49, 658
Sau96I	GGNCC	4 cut(s)	43, 467, 474, 1056
SchI	GAGTC	3 cut(s)	176, 1107, 1109
ScrFI	CCNGG	3 cut(s)	13, 582, 954
SduI	GDGCHC	2 cut(s)	357, 939
SfaNI	GCATC	4 cut(s)	446, 586, 832, 889
SinI	GGWCC	1 cut(s)	43
SmiMI	CAYNNNNRTG	2 cut(s)	350, 764
SmlI	CTYRAG	1 cut(s)	28
SmoI	CTYRAG	1 cut(s)	28
SphI	GCATGC	1 cut(s)	484
SseBI	AGGCCT	1 cut(s)	952
SsiI	CCGC	1 cut(s)	484
SspMI	CTAG	1 cut(s)	1118
StuI	AGGCCT	1 cut(s)	952
StyD4I	CCNGG	3 cut(s)	11, 580, 952
StyI	CCWWGG	1 cut(s)	463
TaaI	ACNGT	1 cut(s)	763
TaiI	ACGT	2 cut(s)	743, 902
TaqI	TCGA	6 cut(s)	48, 63, 135, 177, 274, 1006
TatI	WGTACW	1 cut(s)	822
TauI	GCSGC	1 cut(s)	487
Tru1I	TTAA	4 cut(s)	201, 416, 683, 771
Tru9I	TTAA	4 cut(s)	201, 416, 683, 771
TscAI	CASTG	2 cut(s)	357, 766
TseI	GCWGC	2 cut(s)	161, 795
TspDTI	ATGAA	3 cut(s)	271, 334, 520
TspGWI	ACGGA	1 cut(s)	1017
TspRI	CASTG	2 cut(s)	357, 766
VneI	GTGCAC	1 cut(s)	353
VpaK11BI	GGWCC	1 cut(s)	43
XagI	CCTNNNNNAGG	1 cut(s)	155
XapI	RAATTY	3 cut(s)	391, 831, 971
XceI	RCATGY	2 cut(s)	484, 695
XspI	CTAG	1 cut(s)	1118
ZraI	GACGTC	1 cut(s)	900
Zsp2I	ATGCAT	1 cut(s)	882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.