Rh6AG240600

Glycerol-3-phosphate acyltransferase 3-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
42692256 .. 42696206
3951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG240600.1

Sequence Viewer

Length: 1131 bp
ATGAGCGTCCCCGGAAAGCTGAAATCCTCGAGCTCCGAATTGGACCTGGATCGGCCCAACCTCGAGGACTACCTTCCTTCCGGAGCCTCCATCCAACAAGAACCCGACGGCAACCTTCGCCTGCGTGATTTGCTTGATATCTCTCCCGCCCTCGCCGAGGCCGCCGGCGCCATTATCGATGACTCGTTCACGCGGTGCTTTAAGTCGAATCCTCCGGAGCCCTGGAATTGGAATATCTATTTGTTCCCTTTGTGGTGTTTCGGAGTGGTGATTCGATACTTTGTTCTATTTCCGGCAAGGGTACTGGTCTTGACTATTGGATGGATAATTTTCCTTTCGGCATTCATTCCTGTGCACTTCCTACTCAAAGGCCATGAAAAATTGAGAAAAAATTTAGAGAGATGTTTGGTGGAGTTAATGTGTAGCTTCTTTGTTGCATCTTGGACTGGGGTTGTGAAGTACCATGGACCAAAGCCTAGTATGCGGCCAAAGCAGGTTTTTGTGGCCAATCATACTTCTATGATTGATTTCATCATCCTGGAACAAATGACAGCATTTGCTGTAATTATGCAAAAGCATCCTGGATGGGTTGGATTGTTGCAAAAAACTATTTTGGAGAGTGTGGGATGTATCTGGTTCAATCGTTCAGAATCAAAGGATCGGGAAATTGTTGCGAAGAAATTAAGGGATCATGTGGTGGGGCCTGACAATAACCCTCTCCTTATATTTCCCGAAGGAACTTGTGTAAACAATCACTACACTGTTATGTTTAAGAAGGGTGCATTTGAGCTTGGCTGCTCAGTTTGCCCTGTCGCAATCAAGTACAATAAAATTTTCGTTGATGCATTCTGGAACAGCAGAAAGCAGTCCTTCACAATGCATCTGCTACAGCTTATGACATCATGGGCTGTTGTTTGCGATGTGTGGTATTTGGAGCCCGAAAATATGAAGCCTGGGGAGACTGCCATTGAATTTGCAGAGAGGGTCAGGGACATAATTTCTGTTCGAGCAGGACTTAAGAAGGTCCCATGGGATGGGTATCTGAAATACTCTCGCCCTAGCCCAAAGCATAGAGAGAGGAAGCAACAGAGCTTTGCCGAGTCTATGCTCCGACGCCTTGAGGAGAAGTGA

Protein Analysis

376

Amino Acids

43.19

Weight (kDa)

8.94

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyltransferase PF01553 152 - 274 4.1e-25 Acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 62
Acc36I ACCTGC 1 cut(s) 484
AccB1I GGYRCC 1 cut(s) 167
AccB7I CCANNNNNTGG 1 cut(s) 1034
AccII CGCG 1 cut(s) 193
AccIII TCCGGA 2 cut(s) 80, 214
AciI CCGC 4 cut(s) 147, 162, 193, 484
AclWI GGATC 3 cut(s) 57, 666, 696
AcoI YGGCCR 2 cut(s) 485, 504
AcsI RAATTY 3 cut(s) 391, 831, 971
AcyI GRCGYC 2 cut(s) 168, 1114
AdeI CACNNNGTG 1 cut(s) 195
AfaI GTAC 3 cut(s) 303, 461, 824
AfiI CCNNNNNNNGG 3 cut(s) 157, 228, 1034
AflII CTTAAG 1 cut(s) 1016
AgsI TTSAA 2 cut(s) 640, 971
AjnI CCWGG 5 cut(s) 45, 221, 537, 580, 952
AluBI AGCT 6 cut(s) 19, 33, 426, 790, 892, 1092
AluI AGCT 6 cut(s) 19, 33, 426, 790, 892, 1092
Alw21I GWGCWC 2 cut(s) 35, 357
Alw26I GTCTC 1 cut(s) 953
Alw44I GTGCAC 1 cut(s) 353
AlwI GGATC 3 cut(s) 57, 666, 696
Ama87I CYCGRG 2 cut(s) 28, 62
Aor13HI TCCGGA 2 cut(s) 80, 214
AoxI GGCC 6 cut(s) 53, 159, 370, 485, 504, 701
ApaLI GTGCAC 1 cut(s) 353
ApeKI GCWGC 1 cut(s) 795
ApoI RAATTY 3 cut(s) 391, 831, 971
AspLEI GCGC 1 cut(s) 170
AspS9I GGNCC 5 cut(s) 43, 54, 467, 701, 1024
AsuC2I CCSGG 1 cut(s) 12
AsuHPI GGTGA 1 cut(s) 280
AvaI CYCGRG 2 cut(s) 28, 62
AvaII GGWCC 3 cut(s) 43, 467, 1024
BaeGI GKGCMC 1 cut(s) 357
BalI TGGCCA 1 cut(s) 506
BanI GGYRCC 1 cut(s) 167
BanII GRGCYC 3 cut(s) 35, 222, 939
Bbv12I GWGCWC 2 cut(s) 35, 357
BbvI GCAGC 1 cut(s) 782
BccI CCATC 4 cut(s) 98, 315, 579, 1028
BceAI ACGGC 1 cut(s) 124
BciT130I CCWGG 5 cut(s) 47, 223, 539, 582, 954
BcnI CCSGG 1 cut(s) 12
BcoDI GTCTC 1 cut(s) 953
BfaI CTAG 2 cut(s) 477, 1059
BfmI CTRYAG 1 cut(s) 887
BfoI RGCGCY 1 cut(s) 171
BfrI CTTAAG 1 cut(s) 1016
BfuAI ACCTGC 1 cut(s) 484
BisI GCNGC 3 cut(s) 162, 485, 796
BlsI GCNGC 3 cut(s) 163, 486, 797
Bme1390I CCNGG 6 cut(s) 12, 47, 223, 539, 582, 954
Bme18I GGWCC 3 cut(s) 43, 467, 1024
BmeT110I CYCGRG 2 cut(s) 28, 62
BmgT120I GGNCC 5 cut(s) 43, 54, 467, 701, 1024
BmiI GGNNCC 6 cut(s) 85, 169, 219, 702, 936, 1026
BmrFI CCNGG 6 cut(s) 12, 47, 223, 539, 582, 954
BmrI ACTGGG 1 cut(s) 456
BmsI GCATC 4 cut(s) 446, 586, 832, 889
BmuI ACTGGG 1 cut(s) 456
BpuMI CCSGG 1 cut(s) 12
Bsa29I ATCGAT 1 cut(s) 177
BsaBI GATNNNNATC 1 cut(s) 1038
BsaHI GRCGYC 2 cut(s) 168, 1114
BsaJI CCNNGG 6 cut(s) 10, 156, 221, 463, 953, 1028
BsaWI WCCGGW 2 cut(s) 80, 214
BsaXI ACNNNNNCTCC 2 cut(s) 404, 434
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 228, 1034
Bse118I RCCGGY 1 cut(s) 164
Bse1I ACTGG 2 cut(s) 309, 451
Bse8I GATNNNNATC 1 cut(s) 1038
BseAI TCCGGA 2 cut(s) 80, 214
BseBI CCWGG 5 cut(s) 47, 223, 539, 582, 954
BseCI ATCGAT 1 cut(s) 177
BseDI CCNNGG 6 cut(s) 10, 156, 221, 463, 953, 1028
BseGI GGATG 7 cut(s) 90, 326, 534, 577, 590, 632, 1039
BseJI GATNNNNATC 1 cut(s) 1038
BseLI CCNNNNNNNGG 3 cut(s) 157, 228, 1034
BseMII CTCAG 1 cut(s) 813
BseNI ACTGG 2 cut(s) 309, 451
BseSI GKGCMC 1 cut(s) 357
BseXI GCAGC 1 cut(s) 782
Bsh1236I CGCG 1 cut(s) 193
BshFI GGCC 6 cut(s) 55, 161, 372, 487, 506, 703
BshNI GGYRCC 1 cut(s) 167
BshVI ATCGAT 1 cut(s) 177
BsiHKAI GWGCWC 2 cut(s) 35, 357
BsiHKCI CYCGRG 2 cut(s) 28, 62
BsiSI CCGG 5 cut(s) 12, 81, 165, 215, 293
BslFI GGGAC 2 cut(s) 1004, 1010
BslI CCNNNNNNNGG 3 cut(s) 157, 228, 1034
BsmAI GTCTC 1 cut(s) 953
BsmFI GGGAC 2 cut(s) 1004, 1010
BsmI GAATGC 2 cut(s) 341, 845
BsnI GGCC 6 cut(s) 55, 161, 372, 487, 506, 703
BsoBI CYCGRG 2 cut(s) 28, 62
Bsp1286I GDGCHC 4 cut(s) 35, 222, 357, 939
Bsp13I TCCGGA 2 cut(s) 80, 214
Bsp143I GATC 3 cut(s) 49, 658, 688
Bsp19I CCATGG 2 cut(s) 463, 1028
BspACI CCGC 4 cut(s) 147, 162, 193, 484
BspANI GGCC 6 cut(s) 55, 161, 372, 487, 506, 703
BspCNI CTCAG 1 cut(s) 812
BspDI ATCGAT 1 cut(s) 177
BspEI TCCGGA 2 cut(s) 80, 214
BspFNI CGCG 1 cut(s) 193
BspLI GGNNCC 6 cut(s) 85, 169, 219, 702, 936, 1026
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 3 cut(s) 57, 666, 696
BspT107I GGYRCC 1 cut(s) 167
BspTI CTTAAG 1 cut(s) 1016
BsrFI RCCGGY 1 cut(s) 164
BsrI ACTGG 2 cut(s) 309, 451
BssAI RCCGGY 1 cut(s) 164
BssECI CCNNGG 6 cut(s) 10, 156, 221, 463, 953, 1028
BssMI GATC 3 cut(s) 49, 658, 688
BssNI GRCGYC 2 cut(s) 168, 1114
BssT1I CCWWGG 2 cut(s) 463, 1028
Bst2UI CCWGG 5 cut(s) 47, 223, 539, 582, 954
Bst4CI ACNGT 1 cut(s) 763
BstACI GRCGYC 2 cut(s) 168, 1114
BstAFI CTTAAG 1 cut(s) 1016
BstC8I GCNNGC 2 cut(s) 122, 166
BstDEI CTNAG 1 cut(s) 799
BstDSI CCRYGG 2 cut(s) 463, 1028
BstENI CCTNNNNNAGG 1 cut(s) 155
BstF5I GGATG 7 cut(s) 90, 326, 534, 577, 590, 632, 1039
BstFNI CGCG 1 cut(s) 193
BstH2I RGCGCY 1 cut(s) 171
BstHHI GCGC 1 cut(s) 170
BstKTI GATC 3 cut(s) 52, 661, 691
BstMAI GTCTC 1 cut(s) 953
BstMBI GATC 3 cut(s) 49, 658, 688
BstMWI GCNNNNNNNGC 7 cut(s) 117, 130, 161, 167, 481, 490, 804
BstNI CCWGG 5 cut(s) 47, 223, 539, 582, 954
BstSCI CCNGG 6 cut(s) 10, 45, 221, 537, 580, 952
BstSFI CTRYAG 1 cut(s) 887
BstSLI GKGCMC 1 cut(s) 357
BstUI CGCG 1 cut(s) 193
BstV1I GCAGC 1 cut(s) 782
Bsu15I ATCGAT 1 cut(s) 177
BsuRI GGCC 6 cut(s) 55, 161, 372, 487, 506, 703
BsuTUI ATCGAT 1 cut(s) 177
BtgI CCRYGG 2 cut(s) 463, 1028
BtgZI GCGATG 1 cut(s) 933
BtsCI GGATG 7 cut(s) 90, 326, 534, 577, 590, 632, 1039
BtsIMutI CAGTG 1 cut(s) 759
BveI ACCTGC 1 cut(s) 484
Cac8I GCNNGC 2 cut(s) 122, 166
CfoI GCGC 1 cut(s) 170
Cfr10I RCCGGY 1 cut(s) 164
Cfr13I GGNCC 5 cut(s) 43, 54, 467, 701, 1024
ClaI ATCGAT 1 cut(s) 177
CseI GACGC 1 cut(s) 1122
Csp6I GTAC 3 cut(s) 302, 460, 823
CviAII CATG 5 cut(s) 374, 464, 692, 903, 1029
CviQI GTAC 3 cut(s) 302, 460, 823
DdeI CTNAG 1 cut(s) 799
DinI GGCGCC 1 cut(s) 169
DpnI GATC 3 cut(s) 51, 660, 690
DpnII GATC 3 cut(s) 49, 658, 688
DraIII CACNNNGTG 1 cut(s) 195
EaeI YGGCCR 2 cut(s) 485, 504
Ecl136II GAGCTC 1 cut(s) 33
Eco130I CCWWGG 2 cut(s) 463, 1028
Eco24I GRGCYC 3 cut(s) 35, 222, 939
Eco32I GATATC 1 cut(s) 139
Eco47I GGWCC 3 cut(s) 43, 467, 1024
Eco53kI GAGCTC 1 cut(s) 33
Eco88I CYCGRG 2 cut(s) 28, 62
EcoICRI GAGCTC 1 cut(s) 33
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoO109I RGGNCCY 2 cut(s) 701, 1024
EcoRII CCWGG 5 cut(s) 45, 221, 537, 580, 952
EcoRV GATATC 1 cut(s) 139
EcoT14I CCWWGG 2 cut(s) 463, 1028
EcoT22I ATGCAT 2 cut(s) 847, 882
EcoT38I GRGCYC 3 cut(s) 35, 222, 939
EgeI GGCGCC 1 cut(s) 169
EheI GGCGCC 1 cut(s) 169
ErhI CCWWGG 2 cut(s) 463, 1028
FaeI CATG 5 cut(s) 377, 467, 695, 906, 1032
FalI AAGNNNNNCTT 2 cut(s) 854, 886
FaqI GGGAC 2 cut(s) 1004, 1010
FatI CATG 5 cut(s) 373, 463, 691, 902, 1028
FauI CCCGC 1 cut(s) 154
Fnu4HI GCNGC 3 cut(s) 162, 485, 796
FokI GGATG 7 cut(s) 77, 333, 521, 564, 597, 639, 1046
FriOI GRGCYC 3 cut(s) 35, 222, 939
Fsp4HI GCNGC 3 cut(s) 162, 485, 796
FspBI CTAG 2 cut(s) 477, 1059
GlaI GCGC 1 cut(s) 169
GluI GCNGC 3 cut(s) 162, 485, 796
HaeII RGCGCY 1 cut(s) 171
HaeIII GGCC 6 cut(s) 55, 161, 372, 487, 506, 703
HapII CCGG 5 cut(s) 12, 81, 165, 215, 293
HgaI GACGC 1 cut(s) 1122
HhaI GCGC 1 cut(s) 170
Hin1I GRCGYC 2 cut(s) 168, 1114
Hin1II CATG 5 cut(s) 377, 467, 695, 906, 1032
Hin6I GCGC 1 cut(s) 168
HinP1I GCGC 1 cut(s) 168
HinfI GANTC 5 cut(s) 182, 208, 271, 650, 1100
HpaII CCGG 5 cut(s) 12, 81, 165, 215, 293
HphI GGTGA 1 cut(s) 280
Hpy166II GTNNAC 3 cut(s) 189, 355, 748
Hpy188I TCNGA 5 cut(s) 37, 263, 649, 1044, 1112
Hpy188III TCNNGA 6 cut(s) 81, 215, 310, 662, 731, 850
Hpy8I GTNNAC 3 cut(s) 189, 355, 748
Hpy99I CGWCG 2 cut(s) 110, 1116
HpyAV CCTTC 7 cut(s) 83, 87, 125, 728, 769, 880, 1015
HpyCH4III ACNGT 1 cut(s) 763
HpyCH4V TGCA 8 cut(s) 355, 437, 571, 601, 782, 845, 880, 977
HpyF10VI GCNNNNNNNGC 7 cut(s) 117, 130, 161, 167, 481, 490, 804
HpyF3I CTNAG 1 cut(s) 799
Hsp92I GRCGYC 2 cut(s) 168, 1114
Hsp92II CATG 5 cut(s) 377, 467, 695, 906, 1032
HspAI GCGC 1 cut(s) 168
KasI GGCGCC 1 cut(s) 167
Kpn2I TCCGGA 2 cut(s) 80, 214
KroI GCCGGC 1 cut(s) 164
KroNI GCCGGC 1 cut(s) 166
Kzo9I GATC 3 cut(s) 49, 658, 688
LmnI GCTCC 5 cut(s) 38, 83, 217, 934, 1113
Lsp1109I GCAGC 1 cut(s) 782
LweI GCATC 4 cut(s) 446, 586, 832, 889
MaeI CTAG 2 cut(s) 477, 1059
MalI GATC 3 cut(s) 51, 660, 690
MboI GATC 3 cut(s) 49, 658, 688
MboII GAAGA 1 cut(s) 688
MhlI GDGCHC 4 cut(s) 35, 222, 357, 939
MlsI TGGCCA 1 cut(s) 506
MluNI TGGCCA 1 cut(s) 506
Mly113I GGCGCC 1 cut(s) 168
MlyI GAGTC 2 cut(s) 176, 1109
MmeI TCCRAC 2 cut(s) 118, 571
Mox20I TGGCCA 1 cut(s) 506
Mph1103I ATGCAT 2 cut(s) 847, 882
MreI CGCCGGCG 1 cut(s) 164
MroI TCCGGA 2 cut(s) 80, 214
MroNI GCCGGC 1 cut(s) 164
MscI TGGCCA 1 cut(s) 506
MseI TTAA 5 cut(s) 201, 416, 683, 771, 1017
MslI CAYNNNNRTG 2 cut(s) 350, 764
Msp20I TGGCCA 1 cut(s) 506
MspCI CTTAAG 1 cut(s) 1016
MspI CCGG 5 cut(s) 12, 81, 165, 215, 293
MspR9I CCNGG 6 cut(s) 12, 47, 223, 539, 582, 954
Mva1269I GAATGC 2 cut(s) 341, 845
MvaI CCWGG 5 cut(s) 47, 223, 539, 582, 954
MvnI CGCG 1 cut(s) 193
MwoI GCNNNNNNNGC 7 cut(s) 117, 130, 161, 167, 481, 490, 804
NaeI GCCGGC 1 cut(s) 166
NarI GGCGCC 1 cut(s) 168
NciI CCSGG 1 cut(s) 12
NcoI CCATGG 2 cut(s) 463, 1028
NdeII GATC 3 cut(s) 49, 658, 688
NgoMIV GCCGGC 1 cut(s) 164
NlaIII CATG 5 cut(s) 377, 467, 695, 906, 1032
NlaIV GGNNCC 6 cut(s) 85, 169, 219, 702, 936, 1026
NmeAIII GCCGAG 2 cut(s) 181, 1123
NsiI ATGCAT 2 cut(s) 847, 882
PaeR7I CTCGAG 2 cut(s) 28, 62
PctI GAATGC 2 cut(s) 341, 845
PdiI GCCGGC 1 cut(s) 166
PfeI GAWTC 3 cut(s) 208, 271, 650
PflMI CCANNNNNTGG 1 cut(s) 1034
PfoI TCCNGGA 2 cut(s) 537, 580
PkrI GCNGC 3 cut(s) 163, 486, 797
PleI GAGTC 2 cut(s) 176, 1108
PluTI GGCGCC 1 cut(s) 171
PpsI GAGTC 2 cut(s) 176, 1108
PpuMI RGGWCCY 1 cut(s) 1024
Psp124BI GAGCTC 1 cut(s) 35
Psp5II RGGWCCY 1 cut(s) 1024
Psp6I CCWGG 5 cut(s) 45, 221, 537, 580, 952
PspGI CCWGG 5 cut(s) 45, 221, 537, 580, 952
PspN4I GGNNCC 6 cut(s) 85, 169, 219, 702, 936, 1026
PspPI GGNCC 5 cut(s) 43, 54, 467, 701, 1024
PspPPI RGGWCCY 1 cut(s) 1024
PspXI VCTCGAGB 2 cut(s) 28, 62
RsaI GTAC 3 cut(s) 303, 461, 824
RsaNI GTAC 3 cut(s) 302, 460, 823
RseI CAYNNNNRTG 2 cut(s) 350, 764
SacI GAGCTC 1 cut(s) 35
SaqAI TTAA 5 cut(s) 201, 416, 683, 771, 1017
SatI GCNGC 3 cut(s) 162, 485, 796
Sau3AI GATC 3 cut(s) 49, 658, 688
Sau96I GGNCC 5 cut(s) 43, 54, 467, 701, 1024
SchI GAGTC 2 cut(s) 176, 1109
ScrFI CCNGG 6 cut(s) 12, 47, 223, 539, 582, 954
SduI GDGCHC 4 cut(s) 35, 222, 357, 939
SfaNI GCATC 4 cut(s) 446, 586, 832, 889
SfcI CTRYAG 1 cut(s) 887
SfoI GGCGCC 1 cut(s) 169
Sfr274I CTCGAG 2 cut(s) 28, 62
SgrAI CRCCGGYG 1 cut(s) 164
SinI GGWCC 3 cut(s) 43, 467, 1024
SlaI CTCGAG 2 cut(s) 28, 62
SmiMI CAYNNNNRTG 2 cut(s) 350, 764
SmlI CTYRAG 4 cut(s) 28, 62, 1016, 1118
SmoI CTYRAG 4 cut(s) 28, 62, 1016, 1118
SsiI CCGC 4 cut(s) 147, 162, 193, 484
SspDI GGCGCC 1 cut(s) 167
SspMI CTAG 2 cut(s) 477, 1059
SstI GAGCTC 1 cut(s) 35
StyD4I CCNGG 6 cut(s) 10, 45, 221, 537, 580, 952
StyI CCWWGG 2 cut(s) 463, 1028
TaaI ACNGT 1 cut(s) 763
TaqI TCGA 6 cut(s) 29, 63, 177, 206, 274, 1006
TatI WGTACW 1 cut(s) 822
TauI GCSGC 2 cut(s) 164, 487
TfiI GAWTC 3 cut(s) 208, 271, 650
Tru1I TTAA 5 cut(s) 201, 416, 683, 771, 1017
Tru9I TTAA 5 cut(s) 201, 416, 683, 771, 1017
TscAI CASTG 1 cut(s) 766
TseI GCWGC 1 cut(s) 795
TspDTI ATGAA 4 cut(s) 334, 390, 520, 962
TspRI CASTG 1 cut(s) 766
Van91I CCANNNNNTGG 1 cut(s) 1034
Vha464I CTTAAG 1 cut(s) 1016
VneI GTGCAC 1 cut(s) 353
VpaK11BI GGWCC 3 cut(s) 43, 467, 1024
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 3 cut(s) 391, 831, 971
XhoI CTCGAG 2 cut(s) 28, 62
XspI CTAG 2 cut(s) 477, 1059
Zsp2I ATGCAT 2 cut(s) 847, 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.