RLG00000036589

Glycerol-3-phosphate acyltransferase 3-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
82212017 .. 82214459
2443 bp
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UTR
Exon/CDS
Intron
RLM00000036589

Sequence Viewer

Length: 324 bp
ATGCGGTGCTTTAAGTCGAATCCTCTGGAGCTGTGGAATTGGAATATCTATTTGTTCCCCTTGTGGTGTTTCGGAGTGGTGATTCGATACTTTGTTCTATTTTCAGCAAGGGTACTGGTCTTGACTATTGGATGGATAATTTTCCTTTCGACATTCATTCCTGTGCACTTCCTACTCAAAGGCCATGAAAAATTGAGAAAAAATTTAGAGAGATGTTTGGTGGAGTTAATGTGTAGCTTCTTTGTTGCATCTTGGACTGGGGTTGTGAAGTACCATGGACTAAAGCCTAGTATGCGGCCAAAGCAGGCATTTTATCAGACATGA

Protein Analysis

108

Amino Acids

12.78

Weight (kDa)

9.84

Isoelectric Point (pI)

26.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 4, 295
AcoI YGGCCR 1 cut(s) 296
AcsI RAATTY 1 cut(s) 202
AfaI GTAC 2 cut(s) 114, 272
AluBI AGCT 2 cut(s) 31, 237
AluI AGCT 2 cut(s) 31, 237
Alw21I GWGCWC 1 cut(s) 168
Alw44I GTGCAC 1 cut(s) 164
AoxI GGCC 2 cut(s) 181, 296
ApaLI GTGCAC 1 cut(s) 164
ApoI RAATTY 1 cut(s) 202
AsuHPI GGTGA 1 cut(s) 91
BaeGI GKGCMC 1 cut(s) 168
Bbv12I GWGCWC 1 cut(s) 168
BccI CCATC 1 cut(s) 126
BfaI CTAG 1 cut(s) 288
BisI GCNGC 1 cut(s) 296
BlsI GCNGC 1 cut(s) 297
BmrI ACTGGG 1 cut(s) 267
BmsI GCATC 1 cut(s) 257
BmuI ACTGGG 1 cut(s) 267
BpmI CTGGAG 1 cut(s) 47
BsaJI CCNNGG 1 cut(s) 274
BsaXI ACNNNNNCTCC 2 cut(s) 215, 245
Bse1I ACTGG 2 cut(s) 120, 262
BseDI CCNNGG 1 cut(s) 274
BseGI GGATG 1 cut(s) 137
BseNI ACTGG 2 cut(s) 120, 262
BseSI GKGCMC 1 cut(s) 168
BshFI GGCC 2 cut(s) 183, 298
BsiHKAI GWGCWC 1 cut(s) 168
BsnI GGCC 2 cut(s) 183, 298
Bsp1286I GDGCHC 1 cut(s) 168
Bsp19I CCATGG 1 cut(s) 274
BspACI CCGC 2 cut(s) 4, 295
BspANI GGCC 2 cut(s) 183, 298
BsrI ACTGG 2 cut(s) 120, 262
BssECI CCNNGG 1 cut(s) 274
BssT1I CCWWGG 1 cut(s) 274
BstC8I GCNNGC 1 cut(s) 306
BstDSI CCRYGG 1 cut(s) 274
BstF5I GGATG 1 cut(s) 137
BstMWI GCNNNNNNNGC 2 cut(s) 292, 301
BstSLI GKGCMC 1 cut(s) 168
BsuRI GGCC 2 cut(s) 183, 298
BtgI CCRYGG 1 cut(s) 274
BtsCI GGATG 1 cut(s) 137
Cac8I GCNNGC 1 cut(s) 306
Csp6I GTAC 2 cut(s) 113, 271
CviAII CATG 3 cut(s) 185, 275, 321
CviJI RGCY 5 cut(s) 31, 183, 237, 286, 298
CviKI_1 RGCY 5 cut(s) 31, 183, 237, 286, 298
CviQI GTAC 2 cut(s) 113, 271
EaeI YGGCCR 1 cut(s) 296
Eco130I CCWWGG 1 cut(s) 274
EcoT14I CCWWGG 1 cut(s) 274
ErhI CCWWGG 1 cut(s) 274
FaeI CATG 3 cut(s) 188, 278, 324
FaiI YATR 4 cut(s) 186, 276, 293, 322
FatI CATG 3 cut(s) 184, 274, 320
Fnu4HI GCNGC 1 cut(s) 296
FokI GGATG 1 cut(s) 144
Fsp4HI GCNGC 1 cut(s) 296
FspBI CTAG 1 cut(s) 288
GluI GCNGC 1 cut(s) 296
GsuI CTGGAG 1 cut(s) 47
HaeIII GGCC 2 cut(s) 183, 298
Hin1II CATG 3 cut(s) 188, 278, 324
HinfI GANTC 2 cut(s) 19, 82
HphI GGTGA 1 cut(s) 91
Hpy166II GTNNAC 1 cut(s) 166
Hpy188I TCNGA 2 cut(s) 74, 318
Hpy188III TCNNGA 2 cut(s) 26, 121
Hpy8I GTNNAC 1 cut(s) 166
HpyCH4V TGCA 2 cut(s) 166, 248
HpyF10VI GCNNNNNNNGC 2 cut(s) 292, 301
Hsp92II CATG 3 cut(s) 188, 278, 324
LmnI GCTCC 1 cut(s) 28
LpnPI CCDG 5 cut(s) 11, 101, 174, 243, 290
LweI GCATC 1 cut(s) 257
MaeI CTAG 1 cut(s) 288
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 4 cut(s) 37, 138, 191, 202
MnlI CCTC 1 cut(s) 33
MseI TTAA 2 cut(s) 12, 227
MslI CAYNNNNRTG 1 cut(s) 161
MwoI GCNNNNNNNGC 2 cut(s) 292, 301
NcoI CCATGG 1 cut(s) 274
NlaIII CATG 3 cut(s) 188, 278, 324
PfeI GAWTC 2 cut(s) 19, 82
PkrI GCNGC 1 cut(s) 297
RsaI GTAC 2 cut(s) 114, 272
RsaNI GTAC 2 cut(s) 113, 271
RseI CAYNNNNRTG 1 cut(s) 161
SaqAI TTAA 2 cut(s) 12, 227
SatI GCNGC 1 cut(s) 296
SduI GDGCHC 1 cut(s) 168
SetI ASST 2 cut(s) 33, 239
SfaNI GCATC 1 cut(s) 257
SmiMI CAYNNNNRTG 1 cut(s) 161
Sse9I AATT 4 cut(s) 37, 138, 191, 202
SsiI CCGC 2 cut(s) 4, 295
SspMI CTAG 1 cut(s) 288
StyI CCWWGG 1 cut(s) 274
TaqI TCGA 3 cut(s) 17, 85, 149
TasI AATT 4 cut(s) 37, 138, 191, 202
TauI GCSGC 1 cut(s) 298
TfiI GAWTC 2 cut(s) 19, 82
Tru1I TTAA 2 cut(s) 12, 227
Tru9I TTAA 2 cut(s) 12, 227
TspDTI ATGAA 2 cut(s) 145, 201
VneI GTGCAC 1 cut(s) 164
XapI RAATTY 1 cut(s) 202
XspI CTAG 1 cut(s) 288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.