Prupe.8G176600_v2.0.a1

Glycerol-3-phosphate acyltransferase 3-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
17865193 .. 17869495
4303 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G176600.3

Sequence Viewer

Length: 1131 bp
ATGAGCAGCCCCGGGAAGCTCAACTCCTCAAGCTCCGAATTGGACCTGGATCGCCCCAACATCGAAGATTATCTCCCTTCCGGAGCCTCCATTCAACAAGAACCACACGGCAAGCTTCGCCTGCGTGATTTGCTCGACATATCGCCTACCCTTACCGAGGCTGCTGGAGCCATTATCGATGACTCATTCACACGGTGCTTTAAGTCGAATCCTCCAGAGCCATGGAACTGGAATGTGTATTTGTTCCCTTTGTGGTGTTTTGGAGTGGTGGTTCGCTACTTCATTCTATTTCCTGCGAGGGTTCTAGTATTGACTATCGGATGGATAATTTTCCTTTCATCCTTCATTCCAGTGCACTTCCTGCTGAAAGGCCATGATAAATTGAGAAAAAATTTAGAGAGGTGTTTGGTGGAGTTGATTTGTAGCTTCTTTGTTGCCTCTTGGACTGGGGTTGTAAAGTACCATGGGCCACGACCTAGCATGAGGCCTAAGCAGGTTTTTGTGGCCAATCACACTTCCATGATTGATTTCATCATCTTAGAGCAAATGACTGCATTTGCTGTAATTATGCAAAAGCATCCTGGATGGGTTGGATTGTTGCAAAGCACTATTTTGGAGAGTGTAGGATGCATTTGGTTCAATCGTTCAGAGGCAAAGGATCGGGAAATTGTTACAAAGAAATTAAGGGATCATGTGCTGGGGGTTGACAATAACCCTCTCCTTATATTTCCTGAAGGAACATGTGTAAACAATCACTACACAGTTATGTTTAAGAAGGGTGCATTTGAGCTTGGCTGCTCAGTTTGCCCTGTCGCAATCAAGTACAACAAAATTTTCGTTGATGCTTTTTGGAACAGCAAAAAGCAGTCCTTCACAATGCATCTGCTACAGCTTATGACGTCATGGGCTGTTGTTTGTGATGTGTGGTATTTGGAGCCTCAAAATATTAGGCCTGGGGAGTCCCCCATTGAATTTGCAGAGAGGGTCAGAGATATAATTTCTACGCGAGCAGGACTTAAGAAGGTCCCATGGGATGGTTACCTGAAATACTCTCGCCCAAGCCCAAAGCACAGAGAGCGAAAGCAACAAAGCTTTGCTGAGTCCATGCTCCGGCGCCTAGAGGAAAAGTGA

Protein Analysis

377

Amino Acids

43.24

Weight (kDa)

9.04

Isoelectric Point (pI)

51.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 902
Acc36I ACCTGC 1 cut(s) 484
AccB1I GGYRCC 1 cut(s) 1113
AccB7I CCANNNNNTGG 1 cut(s) 1034
AccII CGCG 1 cut(s) 1006
AccIII TCCGGA 1 cut(s) 80
AclWI GGATC 3 cut(s) 57, 666, 696
AcoI YGGCCR 1 cut(s) 504
AcsI RAATTY 3 cut(s) 391, 831, 971
AcuI CTGAAG 1 cut(s) 753
AcyI GRCGYC 2 cut(s) 899, 1114
AdeI CACNNNGTG 1 cut(s) 195
AfaI GTAC 2 cut(s) 461, 824
AfiI CCNNNNNNNGG 3 cut(s) 157, 1034, 1110
AflII CTTAAG 1 cut(s) 1016
AflIII ACRYGT 1 cut(s) 740
AgsI TTSAA 3 cut(s) 95, 640, 971
AjnI CCWGG 3 cut(s) 45, 580, 952
AloI GAACNNNNNNTCC 2 cut(s) 255, 287
AluBI AGCT 7 cut(s) 19, 33, 115, 426, 790, 892, 1092
AluI AGCT 7 cut(s) 19, 33, 115, 426, 790, 892, 1092
Alw21I GWGCWC 1 cut(s) 357
Alw44I GTGCAC 1 cut(s) 353
AlwI GGATC 3 cut(s) 57, 666, 696
Ama87I CYCGRG 1 cut(s) 11
Aor13HI TCCGGA 1 cut(s) 80
AoxI GGCC 5 cut(s) 370, 467, 485, 504, 950
ApaLI GTGCAC 1 cut(s) 353
ApeKI GCWGC 3 cut(s) 6, 161, 795
ApoI RAATTY 3 cut(s) 391, 831, 971
AspLEI GCGC 1 cut(s) 1116
AspS9I GGNCC 3 cut(s) 43, 467, 1024
AsuC2I CCSGG 2 cut(s) 12, 13
AvaI CYCGRG 1 cut(s) 11
AvaII GGWCC 2 cut(s) 43, 1024
BaeGI GKGCMC 1 cut(s) 357
BalI TGGCCA 1 cut(s) 506
BanI GGYRCC 1 cut(s) 1113
Bbv12I GWGCWC 1 cut(s) 357
BbvI GCAGC 3 cut(s) 18, 148, 782
BccI CCATC 3 cut(s) 315, 579, 1028
BceAI ACGGC 1 cut(s) 124
BciT130I CCWGG 3 cut(s) 47, 582, 954
BcnI CCSGG 2 cut(s) 12, 13
BfaI CTAG 3 cut(s) 305, 477, 1118
BfmI CTRYAG 1 cut(s) 887
BfoI RGCGCY 1 cut(s) 1117
BfrI CTTAAG 1 cut(s) 1016
BfuAI ACCTGC 1 cut(s) 484
BisI GCNGC 3 cut(s) 7, 162, 796
BlsI GCNGC 3 cut(s) 8, 163, 797
Bme1390I CCNGG 5 cut(s) 12, 13, 47, 582, 954
Bme18I GGWCC 2 cut(s) 43, 1024
BmeT110I CYCGRG 1 cut(s) 11
BmgT120I GGNCC 3 cut(s) 43, 467, 1024
BmiI GGNNCC 5 cut(s) 85, 169, 936, 1026, 1115
BmrFI CCNGG 5 cut(s) 12, 13, 47, 582, 954
BmrI ACTGGG 1 cut(s) 456
BmsI GCATC 4 cut(s) 586, 617, 832, 889
BmuI ACTGGG 1 cut(s) 456
BpmI CTGGAG 2 cut(s) 186, 198
Bpu10I CCTNAGC 1 cut(s) 489
BpuEI CTTGAG 1 cut(s) 13
BpuMI CCSGG 2 cut(s) 12, 13
Bsa29I ATCGAT 1 cut(s) 177
BsaHI GRCGYC 2 cut(s) 899, 1114
BsaJI CCNNGG 7 cut(s) 10, 11, 156, 221, 463, 953, 1028
BsaWI WCCGGW 1 cut(s) 80
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 1034, 1110
Bse1I ACTGG 3 cut(s) 233, 350, 451
BseAI TCCGGA 1 cut(s) 80
BseBI CCWGG 3 cut(s) 47, 582, 954
BseCI ATCGAT 1 cut(s) 177
BseDI CCNNGG 7 cut(s) 10, 11, 156, 221, 463, 953, 1028
BseGI GGATG 6 cut(s) 326, 338, 577, 590, 632, 1039
BseLI CCNNNNNNNGG 3 cut(s) 157, 1034, 1110
BseMII CTCAG 2 cut(s) 813, 1089
BseNI ACTGG 3 cut(s) 233, 350, 451
BseRI GAGGAG 1 cut(s) 16
BseSI GKGCMC 1 cut(s) 357
BseXI GCAGC 3 cut(s) 18, 148, 782
BseYI CCCAGC 1 cut(s) 697
Bsh1236I CGCG 1 cut(s) 1006
BshFI GGCC 5 cut(s) 372, 469, 487, 506, 952
BshNI GGYRCC 1 cut(s) 1113
BshVI ATCGAT 1 cut(s) 177
BsiHKAI GWGCWC 1 cut(s) 357
BsiHKCI CYCGRG 1 cut(s) 11
BsiSI CCGG 3 cut(s) 12, 81, 1111
BslFI GGGAC 2 cut(s) 946, 1010
BslI CCNNNNNNNGG 3 cut(s) 157, 1034, 1110
BsmFI GGGAC 2 cut(s) 946, 1010
BsnI GGCC 5 cut(s) 372, 469, 487, 506, 952
BsoBI CYCGRG 1 cut(s) 11
Bsp1286I GDGCHC 1 cut(s) 357
Bsp13I TCCGGA 1 cut(s) 80
Bsp143I GATC 3 cut(s) 49, 658, 688
Bsp19I CCATGG 3 cut(s) 221, 463, 1028
BspANI GGCC 5 cut(s) 372, 469, 487, 506, 952
BspCNI CTCAG 2 cut(s) 812, 1090
BspDI ATCGAT 1 cut(s) 177
BspEI TCCGGA 1 cut(s) 80
BspFNI CGCG 1 cut(s) 1006
BspLI GGNNCC 5 cut(s) 85, 169, 936, 1026, 1115
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 3 cut(s) 57, 666, 696
BspT107I GGYRCC 1 cut(s) 1113
BspTI CTTAAG 1 cut(s) 1016
BsrI ACTGG 3 cut(s) 233, 350, 451
BssECI CCNNGG 7 cut(s) 10, 11, 156, 221, 463, 953, 1028
BssMI GATC 3 cut(s) 49, 658, 688
BssNI GRCGYC 2 cut(s) 899, 1114
BssT1I CCWWGG 3 cut(s) 221, 463, 1028
Bst2UI CCWGG 3 cut(s) 47, 582, 954
Bst4CI ACNGT 2 cut(s) 195, 763
BstACI GRCGYC 2 cut(s) 899, 1114
BstAFI CTTAAG 1 cut(s) 1016
BstAPI GCANNNNNTGC 1 cut(s) 361
BstC8I GCNNGC 3 cut(s) 113, 122, 1008
BstDEI CTNAG 4 cut(s) 489, 538, 799, 1098
BstDSI CCRYGG 3 cut(s) 221, 463, 1028
BstEII GGTNACC 1 cut(s) 1037
BstENI CCTNNNNNAGG 1 cut(s) 155
BstF5I GGATG 6 cut(s) 326, 338, 577, 590, 632, 1039
BstFNI CGCG 1 cut(s) 1006
BstH2I RGCGCY 1 cut(s) 1117
BstHHI GCGC 1 cut(s) 1116
BstKTI GATC 3 cut(s) 52, 661, 691
BstMBI GATC 3 cut(s) 49, 658, 688
BstMWI GCNNNNNNNGC 7 cut(s) 117, 121, 130, 167, 361, 804, 1075
BstNI CCWGG 3 cut(s) 47, 582, 954
BstNSI RCATGY 1 cut(s) 744
BstPI GGTNACC 1 cut(s) 1037
BstSCI CCNGG 5 cut(s) 10, 11, 45, 580, 952
BstSFI CTRYAG 1 cut(s) 887
BstSLI GKGCMC 1 cut(s) 357
BstUI CGCG 1 cut(s) 1006
BstV1I GCAGC 3 cut(s) 18, 148, 782
BstXI CCANNNNNNTGG 2 cut(s) 222, 228
Bsu15I ATCGAT 1 cut(s) 177
BsuRI GGCC 5 cut(s) 372, 469, 487, 506, 952
BsuTUI ATCGAT 1 cut(s) 177
BtgI CCRYGG 3 cut(s) 221, 463, 1028
BtsCI GGATG 6 cut(s) 326, 338, 577, 590, 632, 1039
BtsIMutI CAGTG 1 cut(s) 357
BveI ACCTGC 1 cut(s) 484
Cac8I GCNNGC 3 cut(s) 113, 122, 1008
CfoI GCGC 1 cut(s) 1116
Cfr13I GGNCC 3 cut(s) 43, 467, 1024
Cfr9I CCCGGG 1 cut(s) 11
ClaI ATCGAT 1 cut(s) 177
Csp6I GTAC 2 cut(s) 460, 823
CviQI GTAC 2 cut(s) 460, 823
DdeI CTNAG 4 cut(s) 489, 538, 799, 1098
DinI GGCGCC 1 cut(s) 1115
DpnI GATC 3 cut(s) 51, 660, 690
DpnII GATC 3 cut(s) 49, 658, 688
DraIII CACNNNGTG 1 cut(s) 195
EaeI YGGCCR 1 cut(s) 504
Eco130I CCWWGG 3 cut(s) 221, 463, 1028
Eco147I AGGCCT 2 cut(s) 487, 952
Eco47I GGWCC 2 cut(s) 43, 1024
Eco57I CTGAAG 1 cut(s) 753
Eco88I CYCGRG 1 cut(s) 11
Eco91I GGTNACC 1 cut(s) 1037
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoO109I RGGNCCY 1 cut(s) 1024
EcoO65I GGTNACC 1 cut(s) 1037
EcoRII CCWGG 3 cut(s) 45, 580, 952
EcoT14I CCWWGG 3 cut(s) 221, 463, 1028
EcoT22I ATGCAT 2 cut(s) 632, 882
EgeI GGCGCC 1 cut(s) 1115
EheI GGCGCC 1 cut(s) 1115
ErhI CCWWGG 3 cut(s) 221, 463, 1028
FalI AAGNNNNNCTT 2 cut(s) 854, 886
FaqI GGGAC 2 cut(s) 946, 1010
Fnu4HI GCNGC 3 cut(s) 7, 162, 796
FokI GGATG 6 cut(s) 325, 333, 564, 597, 639, 1046
Fsp4HI GCNGC 3 cut(s) 7, 162, 796
FspBI CTAG 3 cut(s) 305, 477, 1118
GlaI GCGC 1 cut(s) 1115
GluI GCNGC 3 cut(s) 7, 162, 796
GsaI CCCAGC 1 cut(s) 701
GsuI CTGGAG 2 cut(s) 186, 198
HaeII RGCGCY 1 cut(s) 1117
HaeIII GGCC 5 cut(s) 372, 469, 487, 506, 952
HapII CCGG 3 cut(s) 12, 81, 1111
HhaI GCGC 1 cut(s) 1116
Hin1I GRCGYC 2 cut(s) 899, 1114
Hin6I GCGC 1 cut(s) 1114
HinP1I GCGC 1 cut(s) 1114
HincII GTYRAC 1 cut(s) 706
HindII GTYRAC 1 cut(s) 706
HindIII AAGCTT 2 cut(s) 113, 1090
HinfI GANTC 4 cut(s) 182, 208, 959, 1100
HpaII CCGG 3 cut(s) 12, 81, 1111
Hpy166II GTNNAC 3 cut(s) 355, 706, 748
Hpy188I TCNGA 4 cut(s) 37, 320, 649, 989
Hpy188III TCNNGA 4 cut(s) 81, 215, 662, 731
Hpy8I GTNNAC 3 cut(s) 355, 706, 748
HpyAV CCTTC 6 cut(s) 87, 352, 728, 769, 880, 1015
HpyCH4III ACNGT 2 cut(s) 195, 763
HpyCH4IV ACGT 1 cut(s) 899
HpyCH4V TGCA 8 cut(s) 355, 554, 571, 601, 630, 782, 880, 977
HpyF10VI GCNNNNNNNGC 7 cut(s) 117, 121, 130, 167, 361, 804, 1075
HpyF3I CTNAG 4 cut(s) 489, 538, 799, 1098
HpySE526I ACGT 1 cut(s) 899
Hsp92I GRCGYC 2 cut(s) 899, 1114
HspAI GCGC 1 cut(s) 1114
KasI GGCGCC 1 cut(s) 1113
Kpn2I TCCGGA 1 cut(s) 80
Kzo9I GATC 3 cut(s) 49, 658, 688
LmnI GCTCC 5 cut(s) 38, 83, 167, 934, 1113
Lsp1109I GCAGC 3 cut(s) 18, 148, 782
LweI GCATC 4 cut(s) 586, 617, 832, 889
MaeI CTAG 3 cut(s) 305, 477, 1118
MaeII ACGT 1 cut(s) 899
MaeIII GTNAC 2 cut(s) 670, 1037
MalI GATC 3 cut(s) 51, 660, 690
MboI GATC 3 cut(s) 49, 658, 688
MboII GAAGA 1 cut(s) 77
MhlI GDGCHC 1 cut(s) 357
MlsI TGGCCA 1 cut(s) 506
MluNI TGGCCA 1 cut(s) 506
Mly113I GGCGCC 1 cut(s) 1114
MlyI GAGTC 3 cut(s) 176, 968, 1109
MmeI TCCRAC 1 cut(s) 571
Mox20I TGGCCA 1 cut(s) 506
Mph1103I ATGCAT 2 cut(s) 632, 882
MroI TCCGGA 1 cut(s) 80
MscI TGGCCA 1 cut(s) 506
MseI TTAA 4 cut(s) 201, 683, 771, 1017
MslI CAYNNNNRTG 3 cut(s) 350, 518, 764
Msp20I TGGCCA 1 cut(s) 506
MspCI CTTAAG 1 cut(s) 1016
MspI CCGG 3 cut(s) 12, 81, 1111
MspR9I CCNGG 5 cut(s) 12, 13, 47, 582, 954
MvaI CCWGG 3 cut(s) 47, 582, 954
MvnI CGCG 1 cut(s) 1006
MwoI GCNNNNNNNGC 7 cut(s) 117, 121, 130, 167, 361, 804, 1075
NarI GGCGCC 1 cut(s) 1114
NciI CCSGG 2 cut(s) 12, 13
NcoI CCATGG 3 cut(s) 221, 463, 1028
NdeII GATC 3 cut(s) 49, 658, 688
NlaIV GGNNCC 5 cut(s) 85, 169, 936, 1026, 1115
NsiI ATGCAT 2 cut(s) 632, 882
NspI RCATGY 1 cut(s) 744
PceI AGGCCT 2 cut(s) 487, 952
PciI ACATGT 1 cut(s) 740
PfeI GAWTC 1 cut(s) 208
PflMI CCANNNNNTGG 1 cut(s) 1034
PfoI TCCNGGA 1 cut(s) 580
PkrI GCNGC 3 cut(s) 8, 163, 797
PleI GAGTC 3 cut(s) 176, 967, 1108
PluTI GGCGCC 1 cut(s) 1117
PpsI GAGTC 3 cut(s) 176, 967, 1108
PpuMI RGGWCCY 1 cut(s) 1024
PscI ACATGT 1 cut(s) 740
Psp5II RGGWCCY 1 cut(s) 1024
Psp6I CCWGG 3 cut(s) 45, 580, 952
PspEI GGTNACC 1 cut(s) 1037
PspFI CCCAGC 1 cut(s) 697
PspGI CCWGG 3 cut(s) 45, 580, 952
PspN4I GGNNCC 5 cut(s) 85, 169, 936, 1026, 1115
PspPI GGNCC 3 cut(s) 43, 467, 1024
PspPPI RGGWCCY 1 cut(s) 1024
RsaI GTAC 2 cut(s) 461, 824
RsaNI GTAC 2 cut(s) 460, 823
RseI CAYNNNNRTG 3 cut(s) 350, 518, 764
SaqAI TTAA 4 cut(s) 201, 683, 771, 1017
SatI GCNGC 3 cut(s) 7, 162, 796
Sau3AI GATC 3 cut(s) 49, 658, 688
Sau96I GGNCC 3 cut(s) 43, 467, 1024
SchI GAGTC 3 cut(s) 176, 968, 1109
ScrFI CCNGG 5 cut(s) 12, 13, 47, 582, 954
SduI GDGCHC 1 cut(s) 357
SfaNI GCATC 4 cut(s) 586, 617, 832, 889
SfcI CTRYAG 1 cut(s) 887
SfoI GGCGCC 1 cut(s) 1115
SinI GGWCC 2 cut(s) 43, 1024
SmaI CCCGGG 1 cut(s) 13
SmiMI CAYNNNNRTG 3 cut(s) 350, 518, 764
SmlI CTYRAG 2 cut(s) 28, 1016
SmoI CTYRAG 2 cut(s) 28, 1016
SseBI AGGCCT 2 cut(s) 487, 952
SspDI GGCGCC 1 cut(s) 1113
SspI AATATT 1 cut(s) 946
SspMI CTAG 3 cut(s) 305, 477, 1118
StuI AGGCCT 2 cut(s) 487, 952
StyD4I CCNGG 5 cut(s) 10, 11, 45, 580, 952
StyI CCWWGG 3 cut(s) 221, 463, 1028
TaaI ACNGT 2 cut(s) 195, 763
TaiI ACGT 1 cut(s) 902
TaqI TCGA 4 cut(s) 63, 135, 177, 206
TatI WGTACW 1 cut(s) 822
TfiI GAWTC 1 cut(s) 208
Tru1I TTAA 4 cut(s) 201, 683, 771, 1017
Tru9I TTAA 4 cut(s) 201, 683, 771, 1017
TscAI CASTG 1 cut(s) 357
TseI GCWGC 3 cut(s) 6, 161, 795
TspDTI ATGAA 4 cut(s) 271, 327, 334, 520
TspMI CCCGGG 1 cut(s) 11
TspRI CASTG 1 cut(s) 357
Van91I CCANNNNNTGG 1 cut(s) 1034
Vha464I CTTAAG 1 cut(s) 1016
VneI GTGCAC 1 cut(s) 353
VpaK11BI GGWCC 2 cut(s) 43, 1024
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 3 cut(s) 391, 831, 971
XceI RCATGY 1 cut(s) 744
XmaI CCCGGG 1 cut(s) 11
XspI CTAG 3 cut(s) 305, 477, 1118
ZraI GACGTC 1 cut(s) 900
Zsp2I ATGCAT 2 cut(s) 632, 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.