pycom10g11750

Glycerol-3-phosphate acyltransferase 3-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
15324700 .. 15329036
4337 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g11750.8

Sequence Viewer

Length: 1131 bp
ATGAGCAACTCCGGGAAGCTCAACTCCTCAAGCTCCGAATTGGACCTCGATCGCCCCAACCTCGAAGATTACCTCCCTTCCGGCACCTCCATCCAGCAGGAACCCCACGGCAAGCTTCGCCTGCGTGATTTGCTCGACATATCTCCCACCCTAACCGAGGCTGCTGGTGCCATTATCGATGACTCGTTTACAAGGTGCTTTAAGTCCAATCCTCCGGAACCGTGGAACTGGAATGTGTATCTGTTCCCTTTGTGGTGTTTCGGAGTGGTGGTTCGATACTTCATTCTGTTTCCTGCGAGGGTTCTTGTTTTGACGATCGGATGGATAATTTTCCTCTCATCCTTCATTCCAGTGCACTTCCTGCTGAAAGGCCATGATAAATTGAGAAAAAATTTAGAGAGGCTCTTGGTAGAGTTAATTTGTAGCTTCTTCGTTGCATCTTGGACTGGGGTTGTGAAGTACCATGGGCCACGGCCCAGCATGCGGCCAAAGCAGGTCTTTGTGGCCAATCATACTTCCATGATTGATTTCATCATCTTAGAACAAATGACCGCATTTGCTGTAATTATGCAAAAGCATCCTGGATGGGTTGGATTGTTGCAAAGCACTATTTTGGAGAGTGTAGGGTGCATTTGGTTCAATCGTTCAGAGGCAAAGGATCGGGAAATTGTAGCAAAGAAATTAAGGGAACATGTGCTTGGGGCAGACAATAACCCTCTCCTTATATTTCCTGAAGGAACATGTGTAAACAATCACTACACTGTTATGTTTAAGAAGGGTGCATTTGAGCTTGGCTGCTCAGTTTGCCCTGTTGCAATCAAGTACAACAAAATTTTCGTTGATGCTTTTTGGAATAGCAAAAAGCAGTCCTTCACAATGCATCTGCTACAACTTATGACGTCATGGGCTGTTGTTTGTGATGTGTGGTATTTGGAGCCCCAAAACATTAGGCCTGGGGAGACCCCCATTGAATTTGCCGAGAGGGTCAGGGAAATAATTTCTGTTCGAGCAGGACTGAAGATGGTTCCGTGGGATGGGTATCTGAAATACTCTCGGCCCAGCCCAAAGCACAGAGAGCGAAAGCAACAATGCTTTGCTGAGTCTATGCTCCGACGCCTAGAGGAAAAGTGA

Protein Analysis

377

Amino Acids

43.3

Weight (kDa)

8.96

Isoelectric Point (pI)

45.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 902
Acc36I ACCTGC 1 cut(s) 484
AccB1I GGYRCC 2 cut(s) 83, 167
AccIII TCCGGA 1 cut(s) 214
AciI CCGC 2 cut(s) 484, 552
AclWI GGATC 1 cut(s) 666
AcoI YGGCCR 2 cut(s) 485, 504
AcsI RAATTY 3 cut(s) 391, 831, 971
AcuI CTGAAG 2 cut(s) 753, 1037
AcyI GRCGYC 2 cut(s) 899, 1114
AfaI GTAC 2 cut(s) 461, 824
AfiI CCNNNNNNNGG 3 cut(s) 157, 483, 1034
AflIII ACRYGT 2 cut(s) 691, 740
AgsI TTSAA 2 cut(s) 640, 971
AjnI CCWGG 2 cut(s) 580, 952
AjuI GAANNNNNNNTTGG 2 cut(s) 681, 713
AloI GAACNNNNNNTCC 2 cut(s) 255, 287
AluBI AGCT 5 cut(s) 19, 33, 115, 426, 790
AluI AGCT 5 cut(s) 19, 33, 115, 426, 790
Alw21I GWGCWC 1 cut(s) 357
Alw26I GTCTC 1 cut(s) 953
Alw44I GTGCAC 1 cut(s) 353
AlwI GGATC 1 cut(s) 666
Aor13HI TCCGGA 1 cut(s) 214
AoxI GGCC 7 cut(s) 370, 467, 473, 485, 504, 950, 1055
ApaLI GTGCAC 1 cut(s) 353
ApeKI GCWGC 2 cut(s) 161, 795
ApoI RAATTY 3 cut(s) 391, 831, 971
AspS9I GGNCC 4 cut(s) 43, 467, 474, 1056
AsuC2I CCSGG 1 cut(s) 13
AvaII GGWCC 1 cut(s) 43
BaeGI GKGCMC 1 cut(s) 357
BalI TGGCCA 1 cut(s) 506
BanI GGYRCC 2 cut(s) 83, 167
BanII GRGCYC 1 cut(s) 939
Bbv12I GWGCWC 1 cut(s) 357
BbvI GCAGC 2 cut(s) 148, 782
BccI CCATC 5 cut(s) 98, 315, 579, 1015, 1028
BceAI ACGGC 2 cut(s) 124, 488
BciT130I CCWGG 2 cut(s) 582, 954
BcnI CCSGG 1 cut(s) 13
BcoDI GTCTC 1 cut(s) 953
BfaI CTAG 1 cut(s) 1118
BfuAI ACCTGC 1 cut(s) 484
BisI GCNGC 3 cut(s) 162, 485, 796
BlsI GCNGC 3 cut(s) 163, 486, 797
Bme1390I CCNGG 3 cut(s) 13, 582, 954
Bme18I GGWCC 1 cut(s) 43
BmgT120I GGNCC 4 cut(s) 43, 467, 474, 1056
BmiI GGNNCC 6 cut(s) 85, 102, 169, 219, 936, 1026
BmrFI CCNGG 3 cut(s) 13, 582, 954
BmrI ACTGGG 1 cut(s) 456
BmsI GCATC 4 cut(s) 446, 586, 832, 889
BmuI ACTGGG 1 cut(s) 456
BpuEI CTTGAG 1 cut(s) 13
BpuMI CCSGG 1 cut(s) 13
Bsa29I ATCGAT 1 cut(s) 177
BsaBI GATNNNNATC 1 cut(s) 1038
BsaHI GRCGYC 2 cut(s) 899, 1114
BsaI GGTCTC 1 cut(s) 953
BsaJI CCNNGG 7 cut(s) 106, 156, 221, 463, 470, 953, 1028
BsaWI WCCGGW 1 cut(s) 214
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 483, 1034
Bse1I ACTGG 3 cut(s) 233, 350, 451
Bse8I GATNNNNATC 1 cut(s) 1038
BseAI TCCGGA 1 cut(s) 214
BseBI CCWGG 2 cut(s) 582, 954
BseCI ATCGAT 1 cut(s) 177
BseDI CCNNGG 7 cut(s) 106, 156, 221, 463, 470, 953, 1028
BseGI GGATG 6 cut(s) 90, 326, 338, 577, 590, 1039
BseJI GATNNNNATC 1 cut(s) 1038
BseLI CCNNNNNNNGG 3 cut(s) 157, 483, 1034
BseMII CTCAG 2 cut(s) 813, 1089
BseNI ACTGG 3 cut(s) 233, 350, 451
BseRI GAGGAG 1 cut(s) 16
BseSI GKGCMC 1 cut(s) 357
BseXI GCAGC 2 cut(s) 148, 782
BseYI CCCAGC 2 cut(s) 476, 1058
Bsh1285I CGRYCG 2 cut(s) 52, 318
BshFI GGCC 7 cut(s) 372, 469, 475, 487, 506, 952, 1057
BshNI GGYRCC 2 cut(s) 83, 167
BshVI ATCGAT 1 cut(s) 177
BsiEI CGRYCG 2 cut(s) 52, 318
BsiHKAI GWGCWC 1 cut(s) 357
BsiSI CCGG 3 cut(s) 12, 81, 215
BslI CCNNNNNNNGG 3 cut(s) 157, 483, 1034
BsmAI GTCTC 1 cut(s) 953
BsnI GGCC 7 cut(s) 372, 469, 475, 487, 506, 952, 1057
Bso31I GGTCTC 1 cut(s) 953
Bsp1286I GDGCHC 2 cut(s) 357, 939
Bsp13I TCCGGA 1 cut(s) 214
Bsp143I GATC 3 cut(s) 49, 315, 658
Bsp19I CCATGG 1 cut(s) 463
BspACI CCGC 2 cut(s) 484, 552
BspANI GGCC 7 cut(s) 372, 469, 475, 487, 506, 952, 1057
BspCNI CTCAG 2 cut(s) 812, 1090
BspDI ATCGAT 1 cut(s) 177
BspEI TCCGGA 1 cut(s) 214
BspLI GGNNCC 6 cut(s) 85, 102, 169, 219, 936, 1026
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 1 cut(s) 666
BspT107I GGYRCC 2 cut(s) 83, 167
BspTNI GGTCTC 1 cut(s) 953
BsrI ACTGG 3 cut(s) 233, 350, 451
BssECI CCNNGG 7 cut(s) 106, 156, 221, 463, 470, 953, 1028
BssMI GATC 3 cut(s) 49, 315, 658
BssNI GRCGYC 2 cut(s) 899, 1114
BssT1I CCWWGG 1 cut(s) 463
Bst2UI CCWGG 2 cut(s) 582, 954
Bst4CI ACNGT 2 cut(s) 222, 763
BstACI GRCGYC 2 cut(s) 899, 1114
BstAPI GCANNNNNTGC 1 cut(s) 361
BstC8I GCNNGC 3 cut(s) 113, 122, 482
BstDEI CTNAG 3 cut(s) 538, 799, 1098
BstDSI CCRYGG 5 cut(s) 106, 221, 463, 470, 1028
BstENI CCTNNNNNAGG 1 cut(s) 155
BstF5I GGATG 6 cut(s) 90, 326, 338, 577, 590, 1039
BstKTI GATC 3 cut(s) 52, 318, 661
BstMAI GTCTC 1 cut(s) 953
BstMBI GATC 3 cut(s) 49, 315, 658
BstMCI CGRYCG 2 cut(s) 52, 318
BstMWI GCNNNNNNNGC 9 cut(s) 117, 121, 130, 167, 361, 481, 490, 804, 1075
BstNI CCWGG 2 cut(s) 582, 954
BstNSI RCATGY 3 cut(s) 484, 695, 744
BstSCI CCNGG 3 cut(s) 11, 580, 952
BstSLI GKGCMC 1 cut(s) 357
BstV1I GCAGC 2 cut(s) 148, 782
Bsu15I ATCGAT 1 cut(s) 177
BsuRI GGCC 7 cut(s) 372, 469, 475, 487, 506, 952, 1057
BsuTUI ATCGAT 1 cut(s) 177
BtgI CCRYGG 5 cut(s) 106, 221, 463, 470, 1028
BtsCI GGATG 6 cut(s) 90, 326, 338, 577, 590, 1039
BtsIMutI CAGTG 2 cut(s) 357, 759
BveI ACCTGC 1 cut(s) 484
Cac8I GCNNGC 3 cut(s) 113, 122, 482
Cfr13I GGNCC 4 cut(s) 43, 467, 474, 1056
ClaI ATCGAT 1 cut(s) 177
CseI GACGC 1 cut(s) 1122
Csp6I GTAC 2 cut(s) 460, 823
CviAII CATG 7 cut(s) 374, 464, 481, 520, 692, 741, 903
CviQI GTAC 2 cut(s) 460, 823
DdeI CTNAG 3 cut(s) 538, 799, 1098
DpnI GATC 3 cut(s) 51, 317, 660
DpnII GATC 3 cut(s) 49, 315, 658
EaeI YGGCCR 2 cut(s) 485, 504
Eco130I CCWWGG 1 cut(s) 463
Eco147I AGGCCT 1 cut(s) 952
Eco24I GRGCYC 1 cut(s) 939
Eco31I GGTCTC 1 cut(s) 953
Eco47I GGWCC 1 cut(s) 43
Eco57I CTGAAG 2 cut(s) 753, 1037
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoRII CCWGG 2 cut(s) 580, 952
EcoT14I CCWWGG 1 cut(s) 463
EcoT22I ATGCAT 1 cut(s) 882
EcoT38I GRGCYC 1 cut(s) 939
ErhI CCWWGG 1 cut(s) 463
FaeI CATG 7 cut(s) 377, 467, 484, 523, 695, 744, 906
FalI AAGNNNNNCTT 4 cut(s) 482, 514, 854, 886
FatI CATG 7 cut(s) 373, 463, 480, 519, 691, 740, 902
Fnu4HI GCNGC 3 cut(s) 162, 485, 796
FokI GGATG 6 cut(s) 77, 325, 333, 564, 597, 1046
FriOI GRGCYC 1 cut(s) 939
Fsp4HI GCNGC 3 cut(s) 162, 485, 796
FspBI CTAG 1 cut(s) 1118
GluI GCNGC 3 cut(s) 162, 485, 796
GsaI CCCAGC 2 cut(s) 480, 1062
HaeIII GGCC 7 cut(s) 372, 469, 475, 487, 506, 952, 1057
HapII CCGG 3 cut(s) 12, 81, 215
HgaI GACGC 1 cut(s) 1122
Hin1I GRCGYC 2 cut(s) 899, 1114
Hin1II CATG 7 cut(s) 377, 467, 484, 523, 695, 744, 906
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 2 cut(s) 182, 1100
HpaII CCGG 3 cut(s) 12, 81, 215
Hpy166II GTNNAC 3 cut(s) 189, 355, 748
Hpy188I TCNGA 6 cut(s) 37, 263, 320, 649, 1044, 1112
Hpy188III TCNNGA 3 cut(s) 215, 662, 731
Hpy8I GTNNAC 3 cut(s) 189, 355, 748
Hpy99I CGWCG 1 cut(s) 1116
HpyAV CCTTC 5 cut(s) 87, 352, 728, 769, 880
HpyCH4III ACNGT 2 cut(s) 222, 763
HpyCH4IV ACGT 1 cut(s) 899
HpyCH4V TGCA 8 cut(s) 355, 437, 571, 601, 630, 782, 815, 880
HpyF10VI GCNNNNNNNGC 9 cut(s) 117, 121, 130, 167, 361, 481, 490, 804, 1075
HpyF3I CTNAG 3 cut(s) 538, 799, 1098
HpySE526I ACGT 1 cut(s) 899
Hsp92I GRCGYC 2 cut(s) 899, 1114
Hsp92II CATG 7 cut(s) 377, 467, 484, 523, 695, 744, 906
Kpn2I TCCGGA 1 cut(s) 214
Kzo9I GATC 3 cut(s) 49, 315, 658
LmnI GCTCC 3 cut(s) 38, 934, 1113
Lsp1109I GCAGC 2 cut(s) 148, 782
LweI GCATC 4 cut(s) 446, 586, 832, 889
MaeI CTAG 1 cut(s) 1118
MaeII ACGT 1 cut(s) 899
MalI GATC 3 cut(s) 51, 317, 660
MboI GATC 3 cut(s) 49, 315, 658
MboII GAAGA 3 cut(s) 77, 421, 1030
MhlI GDGCHC 2 cut(s) 357, 939
MlsI TGGCCA 1 cut(s) 506
MluNI TGGCCA 1 cut(s) 506
MlyI GAGTC 2 cut(s) 176, 1109
MmeI TCCRAC 1 cut(s) 571
Mox20I TGGCCA 1 cut(s) 506
Mph1103I ATGCAT 1 cut(s) 882
MroI TCCGGA 1 cut(s) 214
MscI TGGCCA 1 cut(s) 506
MseI TTAA 4 cut(s) 201, 416, 683, 771
MslI CAYNNNNRTG 2 cut(s) 350, 764
Msp20I TGGCCA 1 cut(s) 506
MspI CCGG 3 cut(s) 12, 81, 215
MspR9I CCNGG 3 cut(s) 13, 582, 954
MvaI CCWGG 2 cut(s) 582, 954
MwoI GCNNNNNNNGC 9 cut(s) 117, 121, 130, 167, 361, 481, 490, 804, 1075
NciI CCSGG 1 cut(s) 13
NcoI CCATGG 1 cut(s) 463
NdeII GATC 3 cut(s) 49, 315, 658
NlaIII CATG 7 cut(s) 377, 467, 484, 523, 695, 744, 906
NlaIV GGNNCC 6 cut(s) 85, 102, 169, 219, 936, 1026
NmeAIII GCCGAG 2 cut(s) 1003, 1033
NsiI ATGCAT 1 cut(s) 882
NspI RCATGY 3 cut(s) 484, 695, 744
PaeI GCATGC 1 cut(s) 484
PceI AGGCCT 1 cut(s) 952
PciI ACATGT 2 cut(s) 691, 740
PfoI TCCNGGA 2 cut(s) 11, 580
PkrI GCNGC 3 cut(s) 163, 486, 797
Ple19I CGATCG 2 cut(s) 52, 318
PleI GAGTC 2 cut(s) 176, 1108
PpsI GAGTC 2 cut(s) 176, 1108
PscI ACATGT 2 cut(s) 691, 740
Psp6I CCWGG 2 cut(s) 580, 952
PspFI CCCAGC 2 cut(s) 476, 1058
PspGI CCWGG 2 cut(s) 580, 952
PspN4I GGNNCC 6 cut(s) 85, 102, 169, 219, 936, 1026
PspPI GGNCC 4 cut(s) 43, 467, 474, 1056
PvuI CGATCG 2 cut(s) 52, 318
RsaI GTAC 2 cut(s) 461, 824
RsaNI GTAC 2 cut(s) 460, 823
RseI CAYNNNNRTG 2 cut(s) 350, 764
SaqAI TTAA 4 cut(s) 201, 416, 683, 771
SatI GCNGC 3 cut(s) 162, 485, 796
Sau3AI GATC 3 cut(s) 49, 315, 658
Sau96I GGNCC 4 cut(s) 43, 467, 474, 1056
SchI GAGTC 2 cut(s) 176, 1109
ScrFI CCNGG 3 cut(s) 13, 582, 954
SduI GDGCHC 2 cut(s) 357, 939
SfaNI GCATC 4 cut(s) 446, 586, 832, 889
SinI GGWCC 1 cut(s) 43
SmiMI CAYNNNNRTG 2 cut(s) 350, 764
SmlI CTYRAG 1 cut(s) 28
SmoI CTYRAG 1 cut(s) 28
SphI GCATGC 1 cut(s) 484
SseBI AGGCCT 1 cut(s) 952
SsiI CCGC 2 cut(s) 484, 552
SspMI CTAG 1 cut(s) 1118
StuI AGGCCT 1 cut(s) 952
StyD4I CCNGG 3 cut(s) 11, 580, 952
StyI CCWWGG 1 cut(s) 463
TaaI ACNGT 2 cut(s) 222, 763
TaiI ACGT 1 cut(s) 902
TaqI TCGA 6 cut(s) 48, 63, 135, 177, 274, 1006
TatI WGTACW 1 cut(s) 822
TauI GCSGC 1 cut(s) 487
Tru1I TTAA 4 cut(s) 201, 416, 683, 771
Tru9I TTAA 4 cut(s) 201, 416, 683, 771
TscAI CASTG 2 cut(s) 357, 766
TseI GCWGC 2 cut(s) 161, 795
TspDTI ATGAA 3 cut(s) 271, 334, 520
TspGWI ACGGA 1 cut(s) 1017
TspRI CASTG 2 cut(s) 357, 766
VneI GTGCAC 1 cut(s) 353
VpaK11BI GGWCC 1 cut(s) 43
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 3 cut(s) 391, 831, 971
XceI RCATGY 3 cut(s) 484, 695, 744
XspI CTAG 1 cut(s) 1118
ZraI GACGTC 1 cut(s) 900
Zsp2I ATGCAT 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.