MD15G1052300.v1.1

Protein BIG GRAIN 1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
3592170 .. 3593528
1359 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1052300.v1.1.491

Sequence Viewer

Length: 1359 bp
ATGTCAAGGTGGGAAAATACGCCGAGGGAAGATAGATACAGGCACGAAAAGAAAAATCCTTCTTTCTCATCCTCTCTTCTCGACAAAATTTACCGTTCGATTGACGAGGGATCGCCGAGAAACCGCGAGGACTCGATGTTTTACAACGAAACAATGCCGAAGAAACAAAGCAAAAGCGGTGCGAAAAGCGGCAGAGCAGTGGAAGAAGAAGAGATGGCCAGCCTCCGCCGAGCTTGTTTGATCGAGAAATGGATGGAGAAGAAGGTTGGCCAGAAGGTTGGTGGCCAAAGAAGACAGCATTTGGGTGAATTGGACCGAAAATTAGACCGTGATCTCGATGCTATGTTTTTCAGCTCCACCTCTAGCTCCTCTGATTCGAGCTCCGGTGGGTTCTCCTCCTCGGATGCGGATTCTATGTTCGGGTCTAAGTCGAGGTCCTCGTATTTCGCACCGCCACGGCCAAAACCGGTTCGCACCAGCGTCTCGACCCGGTCGGTGAAATCAGAGGAAAAAACAGTGAGAAAACAGAGGACTCTGTTTTATGAACAGAGGGAAGTGCACATGTTCGATGACTACCACTACAGTTGTGCATCGGATCCGACTCCGAAGCTCGATGAAGGTATGATTAAGTCGAAATCGAGGGCATTGAAGATTTACAGCAACCTAAAGAAAGTGAAACAGCCGCTTTCGCCAGGCGGTCGCGTTGCGAATTTCCTCAATTCGATCTTCACTGCAGGGCAGACCAAGAAAACAAAGAGCACTTCATCAATTGGAGGGTATGAGGAAGCGGTTGCGGAGAGGAAACTGAAATCAGGGCAAGACTCGACATGTTCTTCGGCCTCTTCGTTCTCGAGATCATGTTTGAGTAAGAACTCACCATCTACAAGAGAAAAACTGAGAAATGGGGTTAAAAGATCGGTTCATTTCTGCCCGGTGAGTGTGATCGTTGACGAAGATTGCAGGCCTTGTGGACACAAATGCTTGTACGAAGGGGAGGATCAAACCCTAATGCCGGTCACTGTTCCGACCGCATGGAAAATTGGTCGATCGCCAGCGAGAAAAGCGGAGGAGGAGCTTAAGCTTCGAGTGTTGGAGAAAAGCAGAAGAGTTGAGGAAGCGGCCAGAGAGATTTTGAGAGACTGCCGTCGGAACCAAGTAAAGAATGAATTAGTGAGCAGAGATTGTCGTGACGGTGATGAAGGTGATGACGATGATGCTGCTAGTTGTTCGAGTTCGGATCTTTTCGAGCTTGATCACCTTTCGGTGATCGGGAAAGAAAGGTACCTTGAAGAGCTTCCGGTGTACGAAACCACACACGTTCGTACAAATCGTGCCATTGCTAATGGCTTAATAATGTAG

Protein Analysis

453

Amino Acids

51.1

Weight (kDa)

9.16

Isoelectric Point (pI)

63.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1281
AccB1I GGYRCC 1 cut(s) 1281
AccII CGCG 2 cut(s) 126, 702
AclWI GGATC 5 cut(s) 118, 590, 603, 1005, 1245
AcoI YGGCCR 5 cut(s) 216, 268, 283, 458, 1119
AcsI RAATTY 2 cut(s) 87, 709
AfaI GTAC 4 cut(s) 986, 1283, 1304, 1324
AfiI CCNNNNNNNGG 1 cut(s) 1012
AflII CTTAAG 1 cut(s) 1076
AflIII ACRYGT 3 cut(s) 561, 827, 1315
AgeI ACCGGT 1 cut(s) 466
AgsI TTSAA 2 cut(s) 649, 1289
AjnI CCWGG 1 cut(s) 691
AloI GAACNNNNNNTCC 2 cut(s) 401, 433
AluBI AGCT 9 cut(s) 233, 354, 366, 381, 610, 1075, 1081, 1249, 1294
AluI AGCT 9 cut(s) 233, 354, 366, 381, 610, 1075, 1081, 1249, 1294
Alw21I GWGCWC 3 cut(s) 383, 561, 761
Alw26I GTCTC 2 cut(s) 487, 1131
Alw44I GTGCAC 1 cut(s) 557
AlwI GGATC 5 cut(s) 118, 590, 603, 1005, 1245
Ama87I CYCGRG 1 cut(s) 850
AoxI GGCC 7 cut(s) 216, 268, 283, 458, 837, 962, 1119
ApaLI GTGCAC 1 cut(s) 557
ApeKI GCWGC 1 cut(s) 1217
ApoI RAATTY 2 cut(s) 87, 709
ArsI GACNNNNNNTTYG 2 cut(s) 817, 849
AsiGI ACCGGT 1 cut(s) 466
Asp700I GAANNNNTTC 1 cut(s) 1293
Asp718I GGTACC 1 cut(s) 1281
AspS9I GGNCC 2 cut(s) 313, 435
AsuC2I CCSGG 2 cut(s) 490, 932
AsuHPI GGTGA 8 cut(s) 317, 508, 867, 946, 1205, 1214, 1247, 1276
AvaI CYCGRG 1 cut(s) 850
AvaII GGWCC 2 cut(s) 313, 435
BaeGI GKGCMC 1 cut(s) 561
BalI TGGCCA 3 cut(s) 218, 270, 285
BamHI GGATCC 1 cut(s) 595
BanI GGYRCC 1 cut(s) 1281
BanII GRGCYC 1 cut(s) 383
BbsI GAAGAC 1 cut(s) 298
Bbv12I GWGCWC 3 cut(s) 383, 561, 761
BbvI GCAGC 1 cut(s) 1204
BccI CCATC 3 cut(s) 208, 247, 886
BceAI ACGGC 2 cut(s) 473, 1128
BcgI CGANNNNNNTGC 2 cut(s) 1199, 1233
BciT130I CCWGG 1 cut(s) 693
BclI TGATCA 1 cut(s) 1252
BcnI CCSGG 2 cut(s) 490, 932
BcoDI GTCTC 2 cut(s) 487, 1131
BfaI CTAG 2 cut(s) 363, 1221
BfmI CTRYAG 2 cut(s) 580, 732
BfrI CTTAAG 1 cut(s) 1076
BisI GCNGC 4 cut(s) 190, 683, 1119, 1218
BlsI GCNGC 4 cut(s) 191, 684, 1120, 1219
Bme1390I CCNGG 3 cut(s) 490, 693, 932
Bme18I GGWCC 2 cut(s) 313, 435
BmeT110I CYCGRG 1 cut(s) 850
BmgT120I GGNCC 2 cut(s) 313, 435
BmiI GGNNCC 3 cut(s) 597, 1151, 1283
BmrFI CCNGG 3 cut(s) 490, 693, 932
BmsI GCATC 4 cut(s) 328, 394, 599, 1204
BoxI GACNNNNGTC 1 cut(s) 1143
BpiI GAAGAC 1 cut(s) 298
BpuMI CCSGG 2 cut(s) 490, 932
BsaJI CCNNGG 3 cut(s) 23, 399, 455
BsaWI WCCGGW 3 cut(s) 383, 466, 1297
Bsc4I CCNNNNNNNGG 1 cut(s) 1012
Bse118I RCCGGY 2 cut(s) 466, 1012
Bse3DI GCAATG 1 cut(s) 1335
BseBI CCWGG 1 cut(s) 693
BseDI CCNNGG 3 cut(s) 23, 399, 455
BseGI GGATG 3 cut(s) 68, 258, 409
BseLI CCNNNNNNNGG 1 cut(s) 1012
BseMI GCAATG 1 cut(s) 1335
BseMII CTCAG 1 cut(s) 887
BseRI GAGGAG 5 cut(s) 358, 385, 388, 1082, 1085
BseSI GKGCMC 1 cut(s) 561
BseXI GCAGC 1 cut(s) 1204
Bsh1236I CGCG 2 cut(s) 126, 702
Bsh1285I CGRYCG 4 cut(s) 494, 700, 1029, 1049
BshFI GGCC 7 cut(s) 218, 270, 285, 460, 839, 964, 1121
BshNI GGYRCC 1 cut(s) 1281
BshTI ACCGGT 1 cut(s) 466
BsiEI CGRYCG 4 cut(s) 494, 700, 1029, 1049
BsiHKAI GWGCWC 3 cut(s) 383, 561, 761
BsiHKCI CYCGRG 1 cut(s) 850
BsiSI CCGG 6 cut(s) 384, 467, 490, 932, 1013, 1298
BslI CCNNNNNNNGG 1 cut(s) 1012
BsmAI GTCTC 2 cut(s) 487, 1131
BsmBI CGTCTC 1 cut(s) 487
BsnI GGCC 7 cut(s) 218, 270, 285, 460, 839, 964, 1121
BsoBI CYCGRG 1 cut(s) 850
Bsp1286I GDGCHC 3 cut(s) 383, 561, 761
BspANI GGCC 7 cut(s) 218, 270, 285, 460, 839, 964, 1121
BspCNI CTCAG 1 cut(s) 888
BspFNI CGCG 2 cut(s) 126, 702
BspLI GGNNCC 3 cut(s) 597, 1151, 1283
BspMAI CTGCAG 1 cut(s) 736
BspPI GGATC 5 cut(s) 118, 590, 603, 1005, 1245
BspQI GCTCTTC 1 cut(s) 1284
BspT107I GGYRCC 1 cut(s) 1281
BspTI CTTAAG 1 cut(s) 1076
BsrDI GCAATG 1 cut(s) 1335
BsrFI RCCGGY 2 cut(s) 466, 1012
BssAI RCCGGY 2 cut(s) 466, 1012
BssECI CCNNGG 3 cut(s) 23, 399, 455
Bst2UI CCWGG 1 cut(s) 693
Bst4CI ACNGT 6 cut(s) 95, 329, 517, 584, 1021, 1193
Bst6I CTCTTC 5 cut(s) 81, 204, 847, 1099, 1284
BstAFI CTTAAG 1 cut(s) 1076
BstC8I GCNNGC 3 cut(s) 220, 962, 1053
BstDEI CTNAG 2 cut(s) 426, 896
BstDSI CCRYGG 1 cut(s) 455
BstF5I GGATG 3 cut(s) 68, 258, 409
BstFNI CGCG 2 cut(s) 126, 702
BstMAI GTCTC 2 cut(s) 487, 1131
BstMCI CGRYCG 4 cut(s) 494, 700, 1029, 1049
BstMWI GCNNNNNNNGC 2 cut(s) 688, 1061
BstNI CCWGG 1 cut(s) 693
BstNSI RCATGY 2 cut(s) 565, 831
BstPAI GACNNNNGTC 1 cut(s) 1143
BstSCI CCNGG 3 cut(s) 488, 691, 930
BstSFI CTRYAG 2 cut(s) 580, 732
BstSLI GKGCMC 1 cut(s) 561
BstUI CGCG 2 cut(s) 126, 702
BstV1I GCAGC 1 cut(s) 1204
BstV2I GAAGAC 1 cut(s) 298
BstX2I RGATCY 2 cut(s) 595, 1237
BstXI CCANNNNNNTGG 1 cut(s) 278
BstYI RGATCY 2 cut(s) 595, 1237
BsuRI GGCC 7 cut(s) 218, 270, 285, 460, 839, 964, 1121
BtgI CCRYGG 1 cut(s) 455
BtsCI GGATG 3 cut(s) 68, 258, 409
BtsI GCAGTG 2 cut(s) 204, 729
BtsIMutI CAGTG 4 cut(s) 204, 522, 729, 1017
Cac8I GCNNGC 3 cut(s) 220, 962, 1053
Cfr10I RCCGGY 2 cut(s) 466, 1012
Cfr13I GGNCC 2 cut(s) 313, 435
CseI GACGC 1 cut(s) 469
Csp6I GTAC 4 cut(s) 985, 1282, 1303, 1323
CspAI ACCGGT 1 cut(s) 466
CspCI CAANNNNNGTGG 2 cut(s) 566, 601
CviAII CATG 4 cut(s) 562, 828, 858, 1032
CviQI GTAC 4 cut(s) 985, 1282, 1303, 1323
DdeI CTNAG 2 cut(s) 426, 896
EaeI YGGCCR 5 cut(s) 216, 268, 283, 458, 1119
Eam1104I CTCTTC 5 cut(s) 81, 204, 847, 1099, 1284
EarI CTCTTC 5 cut(s) 81, 204, 847, 1099, 1284
EciI GGCGGA 1 cut(s) 215
Ecl136II GAGCTC 1 cut(s) 381
Eco147I AGGCCT 1 cut(s) 964
Eco24I GRGCYC 1 cut(s) 383
Eco47I GGWCC 2 cut(s) 313, 435
Eco53kI GAGCTC 1 cut(s) 381
Eco88I CYCGRG 1 cut(s) 850
EcoICRI GAGCTC 1 cut(s) 381
EcoO109I RGGNCCY 1 cut(s) 435
EcoRII CCWGG 1 cut(s) 691
EcoT38I GRGCYC 1 cut(s) 383
Esp3I CGTCTC 1 cut(s) 487
FaeI CATG 4 cut(s) 565, 831, 861, 1035
FaiI YATR 9 cut(s) 344, 416, 543, 563, 623, 780, 829, 859, 1033
FatI CATG 4 cut(s) 561, 827, 857, 1031
FbaI TGATCA 1 cut(s) 1252
Fnu4HI GCNGC 4 cut(s) 190, 683, 1119, 1218
FokI GGATG 3 cut(s) 55, 265, 416
FriOI GRGCYC 1 cut(s) 383
Fsp4HI GCNGC 4 cut(s) 190, 683, 1119, 1218
FspBI CTAG 2 cut(s) 363, 1221
GluI GCNGC 4 cut(s) 190, 683, 1119, 1218
HaeIII GGCC 7 cut(s) 218, 270, 285, 460, 839, 964, 1121
HapII CCGG 6 cut(s) 384, 467, 490, 932, 1013, 1298
HgaI GACGC 1 cut(s) 469
Hin1II CATG 4 cut(s) 565, 831, 861, 1035
HincII GTYRAC 1 cut(s) 949
HindII GTYRAC 1 cut(s) 949
HindIII AAGCTT 1 cut(s) 1079
HinfI GANTC 6 cut(s) 131, 374, 410, 532, 601, 821
HpaII CCGG 6 cut(s) 384, 467, 490, 932, 1013, 1298
HphI GGTGA 8 cut(s) 317, 508, 867, 946, 1205, 1214, 1247, 1276
Hpy166II GTNNAC 4 cut(s) 559, 949, 971, 1303
Hpy188I TCNGA 9 cut(s) 373, 403, 505, 595, 600, 606, 1026, 1149, 1237
Hpy188III TCNNGA 8 cut(s) 80, 244, 335, 484, 850, 852, 1187, 1270
Hpy8I GTNNAC 4 cut(s) 559, 949, 971, 1303
Hpy99I CGWCG 1 cut(s) 1149
HpyAV CCTTC 6 cut(s) 69, 256, 268, 611, 983, 1193
HpyCH4III ACNGT 6 cut(s) 95, 329, 517, 584, 1021, 1193
HpyCH4IV ACGT 1 cut(s) 1317
HpyCH4V TGCA 4 cut(s) 559, 590, 734, 960
HpyF10VI GCNNNNNNNGC 2 cut(s) 688, 1061
HpyF3I CTNAG 2 cut(s) 426, 896
HpySE526I ACGT 1 cut(s) 1317
Hsp92II CATG 4 cut(s) 565, 831, 861, 1035
KpnI GGTACC 1 cut(s) 1285
Ksp22I TGATCA 1 cut(s) 1252
LguI GCTCTTC 1 cut(s) 1284
LmnI GCTCC 4 cut(s) 359, 371, 386, 1072
Lsp1109I GCAGC 1 cut(s) 1204
LweI GCATC 4 cut(s) 328, 394, 599, 1204
MaeI CTAG 2 cut(s) 363, 1221
MaeII ACGT 1 cut(s) 1317
MaeIII GTNAC 2 cut(s) 1015, 1187
MfeI CAATTG 1 cut(s) 768
MflI RGATCY 2 cut(s) 595, 1237
MhlI GDGCHC 3 cut(s) 383, 561, 761
MlsI TGGCCA 3 cut(s) 218, 270, 285
MluCI AATT 8 cut(s) 87, 308, 320, 709, 718, 768, 1038, 1166
MluNI TGGCCA 3 cut(s) 218, 270, 285
MlyI GAGTC 4 cut(s) 125, 526, 595, 815
MmeI TCCRAC 4 cut(s) 623, 1049, 1071, 1127
Mox20I TGGCCA 3 cut(s) 218, 270, 285
MroXI GAANNNNTTC 1 cut(s) 1293
MscI TGGCCA 3 cut(s) 218, 270, 285
MseI TTAA 4 cut(s) 627, 909, 1077, 1349
MslI CAYNNNNRTG 1 cut(s) 303
Msp20I TGGCCA 3 cut(s) 218, 270, 285
MspCI CTTAAG 1 cut(s) 1076
MspI CCGG 6 cut(s) 384, 467, 490, 932, 1013, 1298
MspR9I CCNGG 3 cut(s) 490, 693, 932
MunI CAATTG 1 cut(s) 768
MvaI CCWGG 1 cut(s) 693
MvnI CGCG 2 cut(s) 126, 702
MwoI GCNNNNNNNGC 2 cut(s) 688, 1061
NciI CCSGG 2 cut(s) 490, 932
NlaIII CATG 4 cut(s) 565, 831, 861, 1035
NlaIV GGNNCC 3 cut(s) 597, 1151, 1283
NmeAIII GCCGAG 3 cut(s) 48, 141, 254
NmuCI GTSAC 2 cut(s) 1015, 1187
NspI RCATGY 2 cut(s) 565, 831
PaeR7I CTCGAG 1 cut(s) 850
PceI AGGCCT 1 cut(s) 964
PciI ACATGT 2 cut(s) 561, 827
PciSI GCTCTTC 1 cut(s) 1284
PcsI WCGNNNNNNNCGW 3 cut(s) 437, 842, 1327
PdmI GAANNNNTTC 1 cut(s) 1293
PfeI GAWTC 2 cut(s) 374, 410
PflFI GACNNNGTC 1 cut(s) 490
PinAI ACCGGT 1 cut(s) 466
PkrI GCNGC 4 cut(s) 191, 684, 1120, 1219
Ple19I CGATCG 1 cut(s) 1049
PleI GAGTC 4 cut(s) 125, 526, 595, 815
PpsI GAGTC 4 cut(s) 125, 526, 595, 815
PpuMI RGGWCCY 1 cut(s) 435
PscI ACATGT 2 cut(s) 561, 827
PshAI GACNNNNGTC 1 cut(s) 1143
Psp124BI GAGCTC 1 cut(s) 383
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 1 cut(s) 691
PspGI CCWGG 1 cut(s) 691
PspN4I GGNNCC 3 cut(s) 597, 1151, 1283
PspPI GGNCC 2 cut(s) 313, 435
PspPPI RGGWCCY 1 cut(s) 435
PstI CTGCAG 1 cut(s) 736
PsuI RGATCY 2 cut(s) 595, 1237
PsyI GACNNNGTC 1 cut(s) 490
PvuI CGATCG 1 cut(s) 1049
RsaI GTAC 4 cut(s) 986, 1283, 1304, 1324
RsaNI GTAC 4 cut(s) 985, 1282, 1303, 1323
RseI CAYNNNNRTG 1 cut(s) 303
SacI GAGCTC 1 cut(s) 383
SapI GCTCTTC 1 cut(s) 1284
SaqAI TTAA 4 cut(s) 627, 909, 1077, 1349
SatI GCNGC 4 cut(s) 190, 683, 1119, 1218
Sau96I GGNCC 2 cut(s) 313, 435
SchI GAGTC 4 cut(s) 125, 526, 595, 815
ScrFI CCNGG 3 cut(s) 490, 693, 932
SduI GDGCHC 3 cut(s) 383, 561, 761
SfaNI GCATC 4 cut(s) 328, 394, 599, 1204
SfcI CTRYAG 2 cut(s) 580, 732
Sfr274I CTCGAG 1 cut(s) 850
SinI GGWCC 2 cut(s) 313, 435
SlaI CTCGAG 1 cut(s) 850
SmiMI CAYNNNNRTG 1 cut(s) 303
SmlI CTYRAG 2 cut(s) 850, 1076
SmoI CTYRAG 2 cut(s) 850, 1076
Sse9I AATT 8 cut(s) 87, 308, 320, 709, 718, 768, 1038, 1166
SseBI AGGCCT 1 cut(s) 964
SspMI CTAG 2 cut(s) 363, 1221
SstI GAGCTC 1 cut(s) 383
StuI AGGCCT 1 cut(s) 964
StyD4I CCNGG 3 cut(s) 488, 691, 930
TaaI ACNGT 6 cut(s) 95, 329, 517, 584, 1021, 1193
TaiI ACGT 1 cut(s) 1320
TaqII GACCGA 1 cut(s) 330
TasI AATT 8 cut(s) 87, 308, 320, 709, 718, 768, 1038, 1166
TauI GCSGC 3 cut(s) 192, 685, 1121
TfiI GAWTC 2 cut(s) 374, 410
Tru1I TTAA 4 cut(s) 627, 909, 1077, 1349
Tru9I TTAA 4 cut(s) 627, 909, 1077, 1349
TscAI CASTG 4 cut(s) 204, 522, 736, 1024
TseFI GTSAC 2 cut(s) 1015, 1187
TseI GCWGC 1 cut(s) 1217
Tsp45I GTSAC 2 cut(s) 1015, 1187
TspDTI ATGAA 6 cut(s) 558, 630, 753, 911, 1179, 1212
TspRI CASTG 4 cut(s) 204, 522, 736, 1024
Tth111I GACNNNGTC 1 cut(s) 490
Vha464I CTTAAG 1 cut(s) 1076
VneI GTGCAC 1 cut(s) 557
VpaK11BI GGWCC 2 cut(s) 313, 435
XapI RAATTY 2 cut(s) 87, 709
XceI RCATGY 2 cut(s) 565, 831
XcmI CCANNNNNNNNNTGG 1 cut(s) 278
XhoI CTCGAG 1 cut(s) 850
XmnI GAANNNNTTC 1 cut(s) 1293
XspI CTAG 2 cut(s) 363, 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.