Prupe.1G406300_v2.0.a1

Protein BIG GRAIN 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
35690068 .. 35691570
1503 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G406300.1

Sequence Viewer

Length: 1380 bp
ATGTCGAGGTGGGAAAACATACAGAGAGACGATAGATACAGGCGTGAAAAGAATAACCCATCTTTCTCTTCCAGTCTTCTGGACAAAATTTACAGCTCAATTGACGAGGGTGACCCCAGAAACCGCGGGGACTCAAAGTTTTATAAAGACACAATGCAGCCAAAGAAACAGAGCAAAAGTGGCGTGAAAACCAGCAGAGCTGTTGAAGAAGACGAGATGGCCAGCCTTCGCCGAGCTTGTTTGATAGAAAAATGGATGGAGAAGAAGGTTAGCGAGAAGGTTGGAACACAGAGAAGGCAGTATCTCACCGAATTGGATAGAAAACCAGACCATGACCATGATCGTGATCTTGATGGTCTGTTTTTCAGCTCCACTTCCAGTTCTTCTGATTCAAGCTCTGGTGGGTTCTCATCCTCGGATGCTGAATCCATGTACGGCTCTAAACCAAGATCCTCATGTTTCGCTCCGCCGAGGCCCAAGCCGGTTCGCACCAGCGTCTCTGCTCGATCGGCAAAAACAGAAGAGAAAATAGAGATAAAGACAGAGAGGAAACAGAGGACTCTGTTTTATGAACAGAGGGAAGTGCATATGTTTGACGATTATCATTACAGTTGTGCCTCAGAGCCGACTCCAAAGCTTGAGGAAGGTATAATCAAGTCCAAATCAAGGGCCTTGAAGATTTATAACAATCTCAAAAAGGTGAAACAACCGATTTCACCGGGCGGTAAGGTTGCGAATTTCCTCAATTCAATCTTCACCACAGGGCAATCCAAGAAAACAAAGAGCACGTCATCAATTGGAGGGTACGAGGATGCTAGTGCAGAGAAAAAATTGAAGTCGGGGCAAGCCTCAACTTGTTCATCAGCCTCTTCATTTTCCAGATCATGTTTAAGCAAGAACTCGCCTTCTACGAGAGAAAAACTGCGAAATGGGGTTAAGAGATCGGTTCATTTTTATCCAGTGAGTGTGATTGTTGACGAAGATTGTAGGCCGTGTGGGCACAAATGTTTGTACGAAAGAGAAGATCAAAGCCTAATGCCTGTCACAGTCCCAACTGCATGGAAAATTGGCAGGTCACCGTCGAGAAAAGCAGAGGAAGAGCTTAAGCTCAAGGTGTTGGAGAAAAACAGGCAAGTAGAAGAAGCAGCCAGAGAGGTTTTGAGAGATTGCCATCGCAACCAAGTTAAGAAGGATTCAGTGAGCAGAGATTATAATTATGTTGATGATGAAGATGATGCGGCTAGTTGTTCAAGTTCGGATCTTTTCGAGCTCGATCACCTTAAGGTGATTGGGAAAGAAAGGTATCTTGAAGAACTTCCTGTGTATGAAACCACCCATGTTCGTACAAATCGTGCCATTGCTAATGGCTTAATAATGTAG

Protein Analysis

460

Amino Acids

52.23

Weight (kDa)

9.12

Isoelectric Point (pI)

62.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 144, 684, 1212
Acc36I ACCTGC 1 cut(s) 1062
AccII CGCG 1 cut(s) 126
AciI CCGC 5 cut(s) 124, 126, 467, 723, 1238
AclWI GGATC 2 cut(s) 444, 1266
AcoI YGGCCR 1 cut(s) 219
AcsI RAATTY 2 cut(s) 87, 736
AfaI GTAC 4 cut(s) 434, 806, 1013, 1345
AfiI CCNNNNNNNGG 1 cut(s) 666
AflII CTTAAG 2 cut(s) 1103, 1280
AgsI TTSAA 7 cut(s) 206, 393, 676, 750, 835, 1251, 1310
AjiI CACGTC 1 cut(s) 789
AluBI AGCT 9 cut(s) 96, 200, 236, 369, 396, 637, 1102, 1108, 1270
AluI AGCT 9 cut(s) 96, 200, 236, 369, 396, 637, 1102, 1108, 1270
Alw21I GWGCWC 2 cut(s) 788, 1272
Alw26I GTCTC 2 cut(s) 21, 502
AlwI GGATC 2 cut(s) 444, 1266
AoxI GGCC 4 cut(s) 219, 473, 669, 989
ApeKI GCWGC 2 cut(s) 157, 1145
ApoI RAATTY 2 cut(s) 87, 736
ArsI GACNNNNNNTTYG 2 cut(s) 773, 805
Asp700I GAANNNNTTC 1 cut(s) 1314
AspS9I GGNCC 2 cut(s) 474, 669
AsuC2I CCSGG 1 cut(s) 720
AsuHPI GGTGA 8 cut(s) 122, 298, 708, 712, 748, 1068, 1268, 1297
BaeGI GKGCMC 1 cut(s) 1002
BaeI ACNNNNGTAYC 2 cut(s) 28, 61
BalI TGGCCA 1 cut(s) 221
BanII GRGCYC 1 cut(s) 1272
BbsI GAAGAC 2 cut(s) 68, 216
Bbv12I GWGCWC 2 cut(s) 788, 1272
BbvI GCAGC 2 cut(s) 169, 1157
BccI CCATC 5 cut(s) 67, 211, 250, 347, 1179
BceAI ACGGC 2 cut(s) 451, 976
BcnI CCSGG 1 cut(s) 720
BcoDI GTCTC 2 cut(s) 21, 502
BfaI CTAG 2 cut(s) 816, 1242
BfrI CTTAAG 2 cut(s) 1103, 1280
BfuAI ACCTGC 1 cut(s) 1062
BglI GCCNNNNNGGC 1 cut(s) 997
BisI GCNGC 3 cut(s) 158, 1146, 1239
BlsI GCNGC 3 cut(s) 159, 1147, 1240
Bme1390I CCNGG 1 cut(s) 720
BmgBI CACGTC 1 cut(s) 789
BmgT120I GGNCC 2 cut(s) 474, 669
BmrFI CCNGG 1 cut(s) 720
BmsI GCATC 3 cut(s) 409, 802, 1225
BpiI GAAGAC 2 cut(s) 68, 216
BpuEI CTTGAG 2 cut(s) 659, 1094
BpuMI CCSGG 1 cut(s) 720
BsaBI GATNNNNATC 2 cut(s) 345, 1170
BsaJI CCNNGG 3 cut(s) 124, 414, 470
Bsc4I CCNNNNNNNGG 1 cut(s) 666
Bse118I RCCGGY 1 cut(s) 481
Bse1I ACTGG 3 cut(s) 72, 378, 959
Bse3DI GCAATG 1 cut(s) 1356
Bse8I GATNNNNATC 2 cut(s) 345, 1170
BseDI CCNNGG 3 cut(s) 124, 414, 470
BseGI GGATG 4 cut(s) 261, 410, 424, 817
BseJI GATNNNNATC 2 cut(s) 345, 1170
BseLI CCNNNNNNNGG 1 cut(s) 666
BseMI GCAATG 1 cut(s) 1356
BseMII CTCAG 1 cut(s) 633
BseNI ACTGG 3 cut(s) 72, 378, 959
BseSI GKGCMC 1 cut(s) 1002
BseXI GCAGC 2 cut(s) 169, 1157
BsgI GTGCAG 1 cut(s) 840
Bsh1236I CGCG 1 cut(s) 126
Bsh1285I CGRYCG 1 cut(s) 509
BshFI GGCC 4 cut(s) 221, 475, 671, 991
BsiEI CGRYCG 1 cut(s) 509
BsiHKAI GWGCWC 2 cut(s) 788, 1272
BsiSI CCGG 2 cut(s) 482, 719
BslFI GGGAC 2 cut(s) 143, 1034
BslI CCNNNNNNNGG 1 cut(s) 666
BsmAI GTCTC 2 cut(s) 21, 502
BsmBI CGTCTC 2 cut(s) 21, 502
BsmFI GGGAC 2 cut(s) 143, 1034
BsnI GGCC 4 cut(s) 221, 475, 671, 991
Bsp1286I GDGCHC 3 cut(s) 788, 1002, 1272
Bsp143I GATC 9 cut(s) 340, 346, 449, 506, 881, 941, 1024, 1258, 1273
BspACI CCGC 5 cut(s) 124, 126, 467, 723, 1238
BspANI GGCC 4 cut(s) 221, 475, 671, 991
BspCNI CTCAG 1 cut(s) 632
BspFNI CGCG 1 cut(s) 126
BspMI ACCTGC 1 cut(s) 1062
BspPI GGATC 2 cut(s) 444, 1266
BspQI GCTCTTC 1 cut(s) 1092
BspTI CTTAAG 2 cut(s) 1103, 1280
BsrDI GCAATG 1 cut(s) 1356
BsrFI RCCGGY 1 cut(s) 481
BsrI ACTGG 3 cut(s) 72, 378, 959
BssAI RCCGGY 1 cut(s) 481
BssECI CCNNGG 3 cut(s) 124, 414, 470
BssMI GATC 9 cut(s) 340, 346, 449, 506, 881, 941, 1024, 1258, 1273
Bst4CI ACNGT 3 cut(s) 611, 1048, 1080
Bst6I CTCTTC 4 cut(s) 73, 516, 874, 1092
BstAFI CTTAAG 2 cut(s) 1103, 1280
BstC8I GCNNGC 2 cut(s) 223, 846
BstDEI CTNAG 1 cut(s) 619
BstDSI CCRYGG 1 cut(s) 124
BstEII GGTNACC 2 cut(s) 110, 1074
BstF5I GGATG 4 cut(s) 261, 410, 424, 817
BstFNI CGCG 1 cut(s) 126
BstKTI GATC 9 cut(s) 343, 349, 452, 509, 884, 944, 1027, 1261, 1276
BstMAI GTCTC 2 cut(s) 21, 502
BstMBI GATC 9 cut(s) 340, 346, 449, 506, 881, 941, 1024, 1258, 1273
BstMCI CGRYCG 1 cut(s) 509
BstMWI GCNNNNNNNGC 3 cut(s) 180, 509, 997
BstPI GGTNACC 2 cut(s) 110, 1074
BstSCI CCNGG 1 cut(s) 718
BstSLI GKGCMC 1 cut(s) 1002
BstUI CGCG 1 cut(s) 126
BstV1I GCAGC 2 cut(s) 169, 1157
BstV2I GAAGAC 2 cut(s) 68, 216
BstX2I RGATCY 2 cut(s) 449, 1258
BstXI CCANNNNNNTGG 2 cut(s) 79, 1059
BstYI RGATCY 2 cut(s) 449, 1258
BsuRI GGCC 4 cut(s) 221, 475, 671, 991
BtgI CCRYGG 1 cut(s) 124
BtgZI GCGATG 1 cut(s) 1157
BtrI CACGTC 1 cut(s) 789
BtsCI GGATG 4 cut(s) 261, 410, 424, 817
BtsIMutI CAGTG 2 cut(s) 966, 1203
BveI ACCTGC 1 cut(s) 1062
Cac8I GCNNGC 2 cut(s) 223, 846
Cfr10I RCCGGY 1 cut(s) 481
Cfr13I GGNCC 2 cut(s) 474, 669
Cfr42I CCGCGG 1 cut(s) 127
CseI GACGC 1 cut(s) 484
Csp6I GTAC 4 cut(s) 433, 805, 1012, 1344
CviAII CATG 7 cut(s) 332, 338, 430, 456, 885, 1059, 1337
CviQI GTAC 4 cut(s) 433, 805, 1012, 1344
DdeI CTNAG 1 cut(s) 619
DpnI GATC 9 cut(s) 342, 348, 451, 508, 883, 943, 1026, 1260, 1275
DpnII GATC 9 cut(s) 340, 346, 449, 506, 881, 941, 1024, 1258, 1273
EaeI YGGCCR 1 cut(s) 219
Eam1104I CTCTTC 4 cut(s) 73, 516, 874, 1092
EarI CTCTTC 4 cut(s) 73, 516, 874, 1092
EciI GGCGGA 1 cut(s) 456
Ecl136II GAGCTC 1 cut(s) 1270
Eco24I GRGCYC 1 cut(s) 1272
Eco53kI GAGCTC 1 cut(s) 1270
Eco91I GGTNACC 2 cut(s) 110, 1074
EcoICRI GAGCTC 1 cut(s) 1270
EcoO109I RGGNCCY 1 cut(s) 669
EcoO65I GGTNACC 2 cut(s) 110, 1074
EcoT38I GRGCYC 1 cut(s) 1272
Esp3I CGTCTC 2 cut(s) 21, 502
FaeI CATG 7 cut(s) 335, 341, 433, 459, 888, 1062, 1340
FaqI GGGAC 2 cut(s) 143, 1034
FatI CATG 7 cut(s) 331, 337, 429, 455, 884, 1058, 1336
FauI CCCGC 1 cut(s) 119
FauNDI CATATG 1 cut(s) 588
Fnu4HI GCNGC 3 cut(s) 158, 1146, 1239
FokI GGATG 4 cut(s) 268, 397, 431, 824
FriOI GRGCYC 1 cut(s) 1272
Fsp4HI GCNGC 3 cut(s) 158, 1146, 1239
FspBI CTAG 2 cut(s) 816, 1242
GluI GCNGC 3 cut(s) 158, 1146, 1239
HaeIII GGCC 4 cut(s) 221, 475, 671, 991
HapII CCGG 2 cut(s) 482, 719
HgaI GACGC 1 cut(s) 484
Hin1II CATG 7 cut(s) 335, 341, 433, 459, 888, 1062, 1340
HincII GTYRAC 1 cut(s) 976
HindII GTYRAC 1 cut(s) 976
HindIII AAGCTT 1 cut(s) 635
HinfI GANTC 6 cut(s) 131, 389, 425, 559, 628, 1193
HpaII CCGG 2 cut(s) 482, 719
HphI GGTGA 8 cut(s) 122, 298, 708, 712, 748, 1068, 1268, 1297
Hpy166II GTNNAC 1 cut(s) 976
Hpy188I TCNGA 4 cut(s) 388, 418, 622, 1258
Hpy188III TCNNGA 6 cut(s) 80, 344, 350, 879, 1083, 1307
Hpy8I GTNNAC 1 cut(s) 976
Hpy99I CGWCG 1 cut(s) 1084
HpyAV CCTTC 7 cut(s) 236, 259, 271, 288, 638, 915, 1183
HpyCH4III ACNGT 3 cut(s) 611, 1048, 1080
HpyCH4IV ACGT 1 cut(s) 788
HpyCH4V TGCA 4 cut(s) 157, 586, 821, 1058
HpyF10VI GCNNNNNNNGC 3 cut(s) 180, 509, 997
HpyF3I CTNAG 1 cut(s) 619
HpySE526I ACGT 1 cut(s) 788
Hsp92II CATG 7 cut(s) 335, 341, 433, 459, 888, 1062, 1340
KspI CCGCGG 1 cut(s) 127
Kzo9I GATC 9 cut(s) 340, 346, 449, 506, 881, 941, 1024, 1258, 1273
LguI GCTCTTC 1 cut(s) 1092
LmnI GCTCC 2 cut(s) 374, 469
Lsp1109I GCAGC 2 cut(s) 169, 1157
LweI GCATC 3 cut(s) 409, 802, 1225
MaeI CTAG 2 cut(s) 816, 1242
MaeII ACGT 1 cut(s) 788
MaeIII GTNAC 3 cut(s) 110, 1042, 1074
MalI GATC 9 cut(s) 342, 348, 451, 508, 883, 943, 1026, 1260, 1275
MboI GATC 9 cut(s) 340, 346, 449, 506, 881, 941, 1024, 1258, 1273
MfeI CAATTG 2 cut(s) 99, 795
MflI RGATCY 2 cut(s) 449, 1258
MhlI GDGCHC 3 cut(s) 788, 1002, 1272
MlsI TGGCCA 1 cut(s) 221
MluCI AATT 9 cut(s) 87, 99, 311, 736, 745, 795, 830, 1065, 1213
MluNI TGGCCA 1 cut(s) 221
MlyI GAGTC 3 cut(s) 125, 553, 622
MmeI TCCRAC 2 cut(s) 262, 1098
Mox20I TGGCCA 1 cut(s) 221
MroXI GAANNNNTTC 1 cut(s) 1314
MscI TGGCCA 1 cut(s) 221
MseI TTAA 6 cut(s) 890, 936, 1104, 1185, 1281, 1370
MslI CAYNNNNRTG 2 cut(s) 336, 342
Msp20I TGGCCA 1 cut(s) 221
MspA1I CMGCKG 1 cut(s) 126
MspCI CTTAAG 2 cut(s) 1103, 1280
MspI CCGG 2 cut(s) 482, 719
MspR9I CCNGG 1 cut(s) 720
MunI CAATTG 2 cut(s) 99, 795
MvnI CGCG 1 cut(s) 126
MwoI GCNNNNNNNGC 3 cut(s) 180, 509, 997
NciI CCSGG 1 cut(s) 720
NdeI CATATG 1 cut(s) 588
NdeII GATC 9 cut(s) 340, 346, 449, 506, 881, 941, 1024, 1258, 1273
NlaIII CATG 7 cut(s) 335, 341, 433, 459, 888, 1062, 1340
NmeAIII GCCGAG 2 cut(s) 257, 495
NmuCI GTSAC 3 cut(s) 110, 1042, 1074
PciSI GCTCTTC 1 cut(s) 1092
PcsI WCGNNNNNNNCGW 2 cut(s) 908, 1348
PdmI GAANNNNTTC 1 cut(s) 1314
PfeI GAWTC 3 cut(s) 389, 425, 1193
PkrI GCNGC 3 cut(s) 159, 1147, 1240
Ple19I CGATCG 1 cut(s) 509
PleI GAGTC 3 cut(s) 125, 553, 622
PpsI GAGTC 3 cut(s) 125, 553, 622
PsiI TTATAA 3 cut(s) 144, 684, 1212
Psp124BI GAGCTC 1 cut(s) 1272
PspEI GGTNACC 2 cut(s) 110, 1074
PspPI GGNCC 2 cut(s) 474, 669
PsuI RGATCY 2 cut(s) 449, 1258
PvuI CGATCG 1 cut(s) 509
RsaI GTAC 4 cut(s) 434, 806, 1013, 1345
RsaNI GTAC 4 cut(s) 433, 805, 1012, 1344
RseI CAYNNNNRTG 2 cut(s) 336, 342
SacI GAGCTC 1 cut(s) 1272
SacII CCGCGG 1 cut(s) 127
SapI GCTCTTC 1 cut(s) 1092
SaqAI TTAA 6 cut(s) 890, 936, 1104, 1185, 1281, 1370
SatI GCNGC 3 cut(s) 158, 1146, 1239
Sau3AI GATC 9 cut(s) 340, 346, 449, 506, 881, 941, 1024, 1258, 1273
Sau96I GGNCC 2 cut(s) 474, 669
SchI GAGTC 3 cut(s) 125, 553, 622
ScrFI CCNGG 1 cut(s) 720
SduI GDGCHC 3 cut(s) 788, 1002, 1272
SfaNI GCATC 3 cut(s) 409, 802, 1225
Sfr303I CCGCGG 1 cut(s) 127
SgrBI CCGCGG 1 cut(s) 127
SmiMI CAYNNNNRTG 2 cut(s) 336, 342
SmlI CTYRAG 4 cut(s) 638, 1103, 1109, 1280
SmoI CTYRAG 4 cut(s) 638, 1103, 1109, 1280
Sse9I AATT 9 cut(s) 87, 99, 311, 736, 745, 795, 830, 1065, 1213
SsiI CCGC 5 cut(s) 124, 126, 467, 723, 1238
SspMI CTAG 2 cut(s) 816, 1242
SstI GAGCTC 1 cut(s) 1272
StyD4I CCNGG 1 cut(s) 718
TaaI ACNGT 3 cut(s) 611, 1048, 1080
TaiI ACGT 1 cut(s) 791
TaqI TCGA 5 cut(s) 5, 505, 1082, 1266, 1272
TasI AATT 9 cut(s) 87, 99, 311, 736, 745, 795, 830, 1065, 1213
TauI GCSGC 1 cut(s) 1241
TfiI GAWTC 3 cut(s) 389, 425, 1193
Tru1I TTAA 6 cut(s) 890, 936, 1104, 1185, 1281, 1370
Tru9I TTAA 6 cut(s) 890, 936, 1104, 1185, 1281, 1370
TscAI CASTG 2 cut(s) 966, 1203
TseFI GTSAC 3 cut(s) 110, 1042, 1074
TseI GCWGC 2 cut(s) 157, 1145
Tsp45I GTSAC 3 cut(s) 110, 1042, 1074
TspDTI ATGAA 6 cut(s) 585, 849, 861, 938, 1242, 1341
TspRI CASTG 2 cut(s) 966, 1203
Vha464I CTTAAG 2 cut(s) 1103, 1280
XapI RAATTY 2 cut(s) 87, 736
XmnI GAANNNNTTC 1 cut(s) 1314
XspI CTAG 2 cut(s) 816, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.