Rmu_co8456551.1_g000001

Protein BIG GRAIN 1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8456551.1
Physical Location & Seq
Reverse (-)
474 .. 1769
1296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8456551.1_g000001.1.cds

Sequence Viewer

Length: 1296 bp
ctgctggatgaaatctaccgctcaattgacgagggcgagaggagtcgtggagatgtgaagttttacggggagacgaagacggcggcattggcgaagagacacagcaaaagcgggagggatacggcggaggaagaggagatggcggcgcttcgcagagcttgtttgatagagaaatggatcgagaagaaggcgagcgagaaggcggaggcagaaaggaggcagagtcgagctgagttggggaggaacaggaaactggaccgggatcatgatgatggtgtgtttttcagttccaattcatgctcttcggaatcgagttccggtgggttctcgtcgtccgacgctgaatccatgtatggttctcggccgcagcagaggtcgtcgtgttttgttccttccctgtggccgaagccgattcggaccagcgtccaaactcggtcggtgaaaacagaggagaggaaaaatgagaagaaacagagtgctaggtttcaaccacagagagactatcacatgcctgatgactatcgtcacagtcgtgtgtcagatcagacgacgaaggtggaggaaagtaggatcaagtccaaatcaagggcattgaagctttacgacaatctaaagaaggtgaaacagccaatttcaccgggcggtcgagtcgcaaatttcctcaattctctgttcacaacagagaaaatcaagaagacaaagggtacatcatcagtttcggggcatgaagaaacagagaggaaaatatattcattgcagggcccaacgtgttcttcagcctcttctttttcacggtcatgtctaagcaaaacctcacccaacacaagagaaaaattgcgcaatggggttaagaaatcggtccaattctacccggtaagtgttgtcgtcggtgaagattgtcgaccatgtgggcaaaaatgcgtgtacgaagaacaagatgcacatcttatgcctgtaactgtgccaacagcatggaaaatcggtcgatctcagttcagaaaaacagatgaggagatcgtcaagcttcgagtgttggggaaaagcaggcaagcagaagaagcagccagggagtttttgaaagaccaccgccggaaccaagttaagacggagtcattattcaatagagattatgacaatcatgatgatgatgatatggatgacgatgctgctagttgttcgagttctgatcttttcgagctcgatcacctagcggtggtcggaaaagaaaggtatctggaagagcttccggtgtacgaaaccacacgtgtcaatcgtacgaatcgtgccattttctaa

Protein Analysis

431

Amino Acids

49.22

Weight (kDa)

9.06

Isoelectric Point (pI)

63.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 839
AccBSI CCGCTC 1 cut(s) 21
AccI GTMKAC 1 cut(s) 901
AclWI GGATC 3 cut(s) 185, 270, 578
AcoI YGGCCR 2 cut(s) 362, 401
AcsI RAATTY 1 cut(s) 655
AcuI CTGAAG 1 cut(s) 759
AcvI CACGTG 1 cut(s) 1265
AfaI GTAC 4 cut(s) 706, 926, 1253, 1276
AfiI CCNNNNNNNGG 2 cut(s) 585, 1213
AflIII ACRYGT 3 cut(s) 767, 1262, 1264
AgsI TTSAA 4 cut(s) 488, 595, 1078, 1120
AjnI CCWGG 1 cut(s) 1064
AjuI GAANNNNNNNTTGG 2 cut(s) 757, 789
AleI CACNNNNGTG 1 cut(s) 531
AluBI AGCT 6 cut(s) 158, 230, 598, 1024, 1198, 1243
AluI AGCT 6 cut(s) 158, 230, 598, 1024, 1198, 1243
Alw21I GWGCWC 1 cut(s) 1200
Alw26I GTCTC 3 cut(s) 65, 91, 492
AlwI GGATC 3 cut(s) 185, 270, 578
AoxI GGCC 3 cut(s) 362, 401, 760
ApaI GGGCCC 1 cut(s) 764
ApeKI GCWGC 3 cut(s) 367, 1061, 1166
ApoI RAATTY 1 cut(s) 655
Asp700I GAANNNNTTC 1 cut(s) 1242
AspLEI GCGC 2 cut(s) 148, 840
AspS9I GGNCC 5 cut(s) 256, 417, 760, 761, 859
AsuC2I CCSGG 3 cut(s) 260, 639, 872
AsuHPI GGTGA 6 cut(s) 451, 627, 631, 807, 902, 1196
AvaII GGWCC 3 cut(s) 256, 417, 859
BaeGI GKGCMC 1 cut(s) 764
BanII GRGCYC 2 cut(s) 764, 1200
BbrPI CACGTG 1 cut(s) 1265
BbsI GAAGAC 2 cut(s) 83, 701
Bbv12I GWGCWC 1 cut(s) 1200
BbvI GCAGC 3 cut(s) 379, 1073, 1153
BccI CCATC 2 cut(s) 133, 266
BceAI ACGGC 2 cut(s) 96, 138
BciT130I CCWGG 1 cut(s) 1066
BciVI GTATCC 1 cut(s) 112
BcnI CCSGG 3 cut(s) 260, 639, 872
BcoDI GTCTC 3 cut(s) 65, 91, 492
BfaI CTAG 3 cut(s) 480, 1170, 1208
BfoI RGCGCY 1 cut(s) 149
BfuI GTATCC 1 cut(s) 112
BisI GCNGC 6 cut(s) 84, 144, 365, 368, 1062, 1167
BlsI GCNGC 6 cut(s) 85, 145, 366, 369, 1063, 1168
Bme1390I CCNGG 4 cut(s) 260, 639, 872, 1066
Bme18I GGWCC 3 cut(s) 256, 417, 859
BmgT120I GGNCC 5 cut(s) 256, 417, 760, 761, 859
BmiI GGNNCC 2 cut(s) 762, 1094
BmrFI CCNGG 4 cut(s) 260, 639, 872, 1066
BmsI GCATC 2 cut(s) 928, 1153
BoxI GACNNNNGTC 2 cut(s) 422, 522
BpiI GAAGAC 2 cut(s) 83, 701
BpuMI CCSGG 3 cut(s) 260, 639, 872
BsaAI YACGTR 1 cut(s) 1265
BsaBI GATNNNNATC 2 cut(s) 519, 942
BsaJI CCNNGG 1 cut(s) 1065
BsaWI WCCGGW 2 cut(s) 317, 1246
BsaXI ACNNNNNCTCC 2 cut(s) 208, 238
Bsc4I CCNNNNNNNGG 2 cut(s) 585, 1213
Bse1I ACTGG 1 cut(s) 258
Bse3DI GCAATG 2 cut(s) 752, 847
Bse8I GATNNNNATC 2 cut(s) 519, 942
BseBI CCWGG 1 cut(s) 1066
BseDI CCNNGG 1 cut(s) 1065
BseGI GGATG 2 cut(s) 13, 1162
BseJI GATNNNNATC 2 cut(s) 519, 942
BseLI CCNNNNNNNGG 2 cut(s) 585, 1213
BseMI GCAATG 2 cut(s) 752, 847
BseMII CTCAG 2 cut(s) 222, 1004
BseNI ACTGG 1 cut(s) 258
BseRI GAGGAG 4 cut(s) 55, 149, 464, 1025
BseSI GKGCMC 1 cut(s) 764
BseX3I CGGCCG 1 cut(s) 362
BseXI GCAGC 3 cut(s) 379, 1073, 1153
Bsh1285I CGRYCG 4 cut(s) 365, 437, 646, 985
BshFI GGCC 3 cut(s) 364, 403, 762
BsiEI CGRYCG 4 cut(s) 365, 437, 646, 985
BsiHKAI GWGCWC 1 cut(s) 1200
BsiSI CCGG 6 cut(s) 259, 318, 638, 872, 1090, 1247
BsiWI CGTACG 1 cut(s) 1274
BslI CCNNNNNNNGG 2 cut(s) 585, 1213
BsmAI GTCTC 3 cut(s) 65, 91, 492
BsmBI CGTCTC 1 cut(s) 65
BsnI GGCC 3 cut(s) 364, 403, 762
Bsp120I GGGCCC 1 cut(s) 760
Bsp1286I GDGCHC 2 cut(s) 764, 1200
Bsp143I GATC 8 cut(s) 177, 262, 541, 570, 986, 1014, 1186, 1201
BspANI GGCC 3 cut(s) 364, 403, 762
BspCNI CTCAG 2 cut(s) 223, 1003
BspHI TCATGA 2 cut(s) 265, 1138
BspLI GGNNCC 2 cut(s) 762, 1094
BspPI GGATC 3 cut(s) 185, 270, 578
BspQI GCTCTTC 2 cut(s) 307, 1233
BsrBI CCGCTC 1 cut(s) 21
BsrDI GCAATG 2 cut(s) 752, 847
BsrI ACTGG 1 cut(s) 258
BssECI CCNNGG 1 cut(s) 1065
BssMI GATC 8 cut(s) 177, 262, 541, 570, 986, 1014, 1186, 1201
Bst2UI CCWGG 1 cut(s) 1066
Bst4CI ACNGT 3 cut(s) 530, 795, 961
Bst6I CTCTTC 5 cut(s) 89, 126, 307, 787, 1233
BstBAI YACGTR 1 cut(s) 1265
BstC8I GCNNGC 3 cut(s) 193, 1046, 1050
BstDEI CTNAG 3 cut(s) 231, 803, 990
BstF5I GGATG 2 cut(s) 13, 1162
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 2 cut(s) 148, 840
BstKTI GATC 8 cut(s) 180, 265, 544, 573, 989, 1017, 1189, 1204
BstMAI GTCTC 3 cut(s) 65, 91, 492
BstMBI GATC 8 cut(s) 177, 262, 541, 570, 986, 1014, 1186, 1201
BstMCI CGRYCG 4 cut(s) 365, 437, 646, 985
BstMWI GCNNNNNNNGC 2 cut(s) 89, 1058
BstNI CCWGG 1 cut(s) 1066
BstNSI RCATGY 1 cut(s) 511
BstPAI GACNNNNGTC 2 cut(s) 422, 522
BstSCI CCNGG 4 cut(s) 258, 637, 870, 1064
BstSLI GKGCMC 1 cut(s) 764
BstV1I GCAGC 3 cut(s) 379, 1073, 1153
BstV2I GAAGAC 2 cut(s) 83, 701
BstXI CCANNNNNNTGG 1 cut(s) 972
BstZI CGGCCG 1 cut(s) 362
BsuI GTATCC 1 cut(s) 112
BsuRI GGCC 3 cut(s) 364, 403, 762
BtsCI GGATG 2 cut(s) 13, 1162
Cac8I GCNNGC 3 cut(s) 193, 1046, 1050
CciI TCATGA 2 cut(s) 265, 1138
CfoI GCGC 2 cut(s) 148, 840
Cfr13I GGNCC 5 cut(s) 256, 417, 760, 761, 859
CseI GACGC 2 cut(s) 347, 412
Csp6I GTAC 4 cut(s) 705, 925, 1252, 1275
CviAII CATG 9 cut(s) 266, 297, 349, 508, 725, 798, 906, 972, 1139
CviQI GTAC 4 cut(s) 705, 925, 1252, 1275
DdeI CTNAG 3 cut(s) 231, 803, 990
DpnI GATC 8 cut(s) 179, 264, 543, 572, 988, 1016, 1188, 1203
DpnII GATC 8 cut(s) 177, 262, 541, 570, 986, 1014, 1186, 1201
EaeI YGGCCR 2 cut(s) 362, 401
EagI CGGCCG 1 cut(s) 362
Eam1104I CTCTTC 5 cut(s) 89, 126, 307, 787, 1233
EarI CTCTTC 5 cut(s) 89, 126, 307, 787, 1233
EciI GGCGGA 2 cut(s) 140, 218
Ecl136II GAGCTC 1 cut(s) 1198
EclXI CGGCCG 1 cut(s) 362
Eco24I GRGCYC 2 cut(s) 764, 1200
Eco47I GGWCC 3 cut(s) 256, 417, 859
Eco52I CGGCCG 1 cut(s) 362
Eco53kI GAGCTC 1 cut(s) 1198
Eco57I CTGAAG 1 cut(s) 759
Eco72I CACGTG 1 cut(s) 1265
EcoICRI GAGCTC 1 cut(s) 1198
EcoO109I RGGNCCY 1 cut(s) 760
EcoRII CCWGG 1 cut(s) 1064
EcoT38I GRGCYC 2 cut(s) 764, 1200
Esp3I CGTCTC 1 cut(s) 65
FaeI CATG 9 cut(s) 269, 300, 352, 511, 728, 801, 909, 975, 1142
FatI CATG 9 cut(s) 265, 296, 348, 507, 724, 797, 905, 971, 1138
FauI CCCGC 1 cut(s) 104
FblI GTMKAC 1 cut(s) 901
Fnu4HI GCNGC 6 cut(s) 84, 144, 365, 368, 1062, 1167
FokI GGATG 2 cut(s) 20, 1169
FriOI GRGCYC 2 cut(s) 764, 1200
Fsp4HI GCNGC 6 cut(s) 84, 144, 365, 368, 1062, 1167
FspBI CTAG 3 cut(s) 480, 1170, 1208
FspI TGCGCA 1 cut(s) 839
GlaI GCGC 2 cut(s) 147, 839
GluI GCNGC 6 cut(s) 84, 144, 365, 368, 1062, 1167
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 3 cut(s) 364, 403, 762
HapII CCGG 6 cut(s) 259, 318, 638, 872, 1090, 1247
HgaI GACGC 2 cut(s) 347, 412
HhaI GCGC 2 cut(s) 148, 840
Hin1II CATG 9 cut(s) 269, 300, 352, 511, 728, 801, 909, 975, 1142
Hin6I GCGC 2 cut(s) 146, 838
HinP1I GCGC 2 cut(s) 146, 838
HincII GTYRAC 1 cut(s) 902
HindII GTYRAC 1 cut(s) 902
HindIII AAGCTT 2 cut(s) 596, 1022
HinfI GANTC 8 cut(s) 43, 223, 308, 344, 412, 648, 1109, 1279
HpaII CCGG 6 cut(s) 259, 318, 638, 872, 1090, 1247
HphI GGTGA 6 cut(s) 451, 627, 631, 807, 902, 1196
Hpy166II GTNNAC 4 cut(s) 675, 902, 925, 1252
Hpy188I TCNGA 8 cut(s) 307, 337, 417, 541, 546, 998, 1186, 1220
Hpy188III TCNNGA 5 cut(s) 181, 266, 691, 1139, 1235
Hpy8I GTNNAC 4 cut(s) 675, 902, 925, 1252
Hpy99I CGWCG 5 cut(s) 334, 341, 382, 553, 890
HpyAV CCTTC 5 cut(s) 181, 193, 402, 547, 610
HpyCH4III ACNGT 3 cut(s) 530, 795, 961
HpyCH4IV ACGT 2 cut(s) 767, 1264
HpyCH4V TGCA 2 cut(s) 757, 941
HpyF10VI GCNNNNNNNGC 2 cut(s) 89, 1058
HpyF3I CTNAG 3 cut(s) 231, 803, 990
HpySE526I ACGT 2 cut(s) 767, 1264
Hsp92II CATG 9 cut(s) 269, 300, 352, 511, 728, 801, 909, 975, 1142
HspAI GCGC 2 cut(s) 146, 838
Kzo9I GATC 8 cut(s) 177, 262, 541, 570, 986, 1014, 1186, 1201
LguI GCTCTTC 2 cut(s) 307, 1233
Lsp1109I GCAGC 3 cut(s) 379, 1073, 1153
LweI GCATC 2 cut(s) 928, 1153
MaeI CTAG 3 cut(s) 480, 1170, 1208
MaeII ACGT 2 cut(s) 767, 1264
MaeIII GTNAC 2 cut(s) 524, 955
MalI GATC 8 cut(s) 179, 264, 543, 572, 988, 1016, 1188, 1203
MbiI CCGCTC 1 cut(s) 21
MboI GATC 8 cut(s) 177, 262, 541, 570, 986, 1014, 1186, 1201
MfeI CAATTG 1 cut(s) 24
MhlI GDGCHC 2 cut(s) 764, 1200
MluCI AATT 7 cut(s) 24, 292, 630, 655, 664, 833, 863
MlyI GAGTC 4 cut(s) 52, 232, 657, 1118
MmeI TCCRAC 2 cut(s) 360, 1198
MroXI GAANNNNTTC 1 cut(s) 1242
MseI TTAA 2 cut(s) 849, 1101
MslI CAYNNNNRTG 4 cut(s) 270, 531, 796, 1143
MspI CCGG 6 cut(s) 259, 318, 638, 872, 1090, 1247
MspR9I CCNGG 4 cut(s) 260, 639, 872, 1066
MunI CAATTG 1 cut(s) 24
MvaI CCWGG 1 cut(s) 1066
MwoI GCNNNNNNNGC 2 cut(s) 89, 1058
NciI CCSGG 3 cut(s) 260, 639, 872
NdeII GATC 8 cut(s) 177, 262, 541, 570, 986, 1014, 1186, 1201
NlaIII CATG 9 cut(s) 269, 300, 352, 511, 728, 801, 909, 975, 1142
NlaIV GGNNCC 2 cut(s) 762, 1094
NmeAIII GCCGAG 1 cut(s) 340
NmuCI GTSAC 1 cut(s) 524
NsbI TGCGCA 1 cut(s) 839
NspI RCATGY 1 cut(s) 511
OliI CACNNNNGTG 1 cut(s) 531
PagI TCATGA 2 cut(s) 265, 1138
PciSI GCTCTTC 2 cut(s) 307, 1233
PcsI WCGNNNNNNNCGW 3 cut(s) 529, 1270, 1279
PdmI GAANNNNTTC 1 cut(s) 1242
PfeI GAWTC 4 cut(s) 308, 344, 412, 1279
Pfl23II CGTACG 1 cut(s) 1274
PflFI GACNNNGTC 1 cut(s) 1108
PkrI GCNGC 6 cut(s) 85, 145, 366, 369, 1063, 1168
PleI GAGTC 4 cut(s) 51, 231, 656, 1117
PmaCI CACGTG 1 cut(s) 1265
PmlI CACGTG 1 cut(s) 1265
PpsI GAGTC 4 cut(s) 51, 231, 656, 1117
Ppu21I YACGTR 1 cut(s) 1265
PshAI GACNNNNGTC 2 cut(s) 422, 522
Psp124BI GAGCTC 1 cut(s) 1200
Psp6I CCWGG 1 cut(s) 1064
PspCI CACGTG 1 cut(s) 1265
PspGI CCWGG 1 cut(s) 1064
PspLI CGTACG 1 cut(s) 1274
PspN4I GGNNCC 2 cut(s) 762, 1094
PspOMI GGGCCC 1 cut(s) 760
PspPI GGNCC 5 cut(s) 256, 417, 760, 761, 859
PsyI GACNNNGTC 1 cut(s) 1108
RsaI GTAC 4 cut(s) 706, 926, 1253, 1276
RsaNI GTAC 4 cut(s) 705, 925, 1252, 1275
RseI CAYNNNNRTG 4 cut(s) 270, 531, 796, 1143
SacI GAGCTC 1 cut(s) 1200
SalI GTCGAC 1 cut(s) 900
SapI GCTCTTC 2 cut(s) 307, 1233
SaqAI TTAA 2 cut(s) 849, 1101
SatI GCNGC 6 cut(s) 84, 144, 365, 368, 1062, 1167
Sau3AI GATC 8 cut(s) 177, 262, 541, 570, 986, 1014, 1186, 1201
Sau96I GGNCC 5 cut(s) 256, 417, 760, 761, 859
SchI GAGTC 4 cut(s) 52, 232, 657, 1118
ScrFI CCNGG 4 cut(s) 260, 639, 872, 1066
SduI GDGCHC 2 cut(s) 764, 1200
SfaNI GCATC 2 cut(s) 928, 1153
SinI GGWCC 3 cut(s) 256, 417, 859
SmiMI CAYNNNNRTG 4 cut(s) 270, 531, 796, 1143
Sse9I AATT 7 cut(s) 24, 292, 630, 655, 664, 833, 863
SspMI CTAG 3 cut(s) 480, 1170, 1208
SstI GAGCTC 1 cut(s) 1200
StyD4I CCNGG 4 cut(s) 258, 637, 870, 1064
TaaI ACNGT 3 cut(s) 530, 795, 961
TaiI ACGT 2 cut(s) 770, 1267
TaqII GACCGA 3 cut(s) 423, 847, 971
TasI AATT 7 cut(s) 24, 292, 630, 655, 664, 833, 863
TauI GCSGC 3 cut(s) 86, 146, 367
TfiI GAWTC 4 cut(s) 308, 344, 412, 1279
Tru1I TTAA 2 cut(s) 849, 1101
Tru9I TTAA 2 cut(s) 849, 1101
TseFI GTSAC 1 cut(s) 524
TseI GCWGC 3 cut(s) 367, 1061, 1166
Tsp45I GTSAC 1 cut(s) 524
TspDTI ATGAA 4 cut(s) 24, 285, 741, 741
TspGWI ACGGA 1 cut(s) 1121
Tth111I GACNNNGTC 1 cut(s) 1108
VpaK11BI GGWCC 3 cut(s) 256, 417, 859
XapI RAATTY 1 cut(s) 655
XceI RCATGY 1 cut(s) 511
XmiI GTMKAC 1 cut(s) 901
XmnI GAANNNNTTC 1 cut(s) 1242
XspI CTAG 3 cut(s) 480, 1170, 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.