MD15G1075500.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
5149649 .. 5153631
3983 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1075500.v1.1.491

Sequence Viewer

Length: 1527 bp
ATGGAAGAAACGTACTTCTGGTACAGTCTAGCACTACTCATCATCTTCCCTGTGATTCTCAAGCTCTCCATCACTACAATCACACAAAAACGCAATAAGAATCTTCCTCCATCCCCACCATCTCTTCCCATCATTGGCCACCTCCATCTTCTTAAACAACCAGTCCACCGAACTCTCCAATCCCTTTCTTCAAAATTCGGCAAAACCATACTCCTCCGCTGGGGCTTACGCAAAGTCCTCCTAGTGTCTTCGCCTTTGATAGCCGAAGAATGCTTGACGAAGCACGACATCATCTTCGCTAACCGCCCGCGCTTGCTCGCGGGAAAACACTTCAACTACGACTTCACAACGGTCTCTGTAGCTCCCTATGGAGACCTCTGGCGCAACCTTCGCCGGATTATGACCCTCGAGATGTTCTCCTCCTCTCGCCTCGTCATGTTTTCGAGTGTTCGACAGGGAGAAGTTCGGCTTTTACTGAATCAGATAATGAAGAGTAGAAGCGTACCGATCGACCTCAAGTCCAAGTTTACCGAGCTTTCGTTTAATGCGATGACGATGATGGTTTTGGGAAAGAGGTATTATGGTGAAAATGTTTTGGATGTTGAAGAGGCGAAGAATATACAGAAGGTTATGCGGGACGGAGTGGACTTGTCCGGGGCAACAAATCTTGGAGATTTTTTACCCTTTTTACAGTGGATGGACATAACGGGGATTGAGAAGAAGATGGTGAGAATAATGGCAAAGTTGGATAGCTTTTTGCAGGGCTTGGTGGAAGAGCGTCGTGCAATTTTGTCTTCAGATTTTGCATCTAATGGCAAAGAGGTTGGCAAGTTGATGATTGATAATTTGTTGAAGCTCCAAGAAACGGATTCCCAGGTTTACACCGACGAAATAATCAAGGGAATTATTCTGGTGTTGCTAGTAGCAGGGACAGACACTTCATCATCATCTCTTGACTGGTCAATGGCGTTATTGCTCAACCATCCAGAGGAGATGGAGAAAGTGAGAGCTGAGATAGACACAAACATTGGACAAGAGCGTCCGTTGGAAGAGCAAGACCTGCCAAAGCTCAAGTACTTACAAAATGTGATCCATGAGACGCATCGCTTGTACCCACCTGTCCCACTTCTAGTGCCTCACGAAGCTTCTGAGGACTGTGTGGTGGGGGGATATGATGTGCCACGTCACACAATGCTGGTGATCAACGCTTGGGCCATTCATAGGGACCCTGAGATTTGGGAGGACCCTACAAAGTTTAAGCCAGAGAGGTTTGAAGGATGGAGTGGTGAGGGCTCTCAAGGGTACAAGTTAATTCCGTTTGGGAATGGAAGGCGTGGATGTCCTGGGGCTGGCTTAGGAAACAGGTTAGTTGGATTGGCGCTGGGGAGTTTGATTCAGTCTTTTGAGTGGGAGAGGGTTGGTGAAGAGAAGGTGGACATGGGTGAAGGTTTGGGCCTTGCCATGCCAAGGGTCGAGCCATTGGAGGCTATTTGTAAACCACGCCCAATCATGCTGTCTTCTATGTGA

Protein Analysis

509

Amino Acids

57.48

Weight (kDa)

6.86

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 489 4.5e-99 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1038
Acc36I ACCTGC 1 cut(s) 1068
AccII CGCG 2 cut(s) 310, 320
AciI CCGC 5 cut(s) 217, 304, 308, 320, 634
AclWI GGATC 1 cut(s) 1084
AcoI YGGCCR 1 cut(s) 136
AcsI RAATTY 1 cut(s) 194
AcuI CTGAAG 1 cut(s) 780
AfaI GTAC 6 cut(s) 14, 23, 504, 1076, 1112, 1304
AfiI CCNNNNNNNGG 7 cut(s) 134, 220, 865, 988, 1221, 1349, 1467
AgsI TTSAA 5 cut(s) 192, 334, 605, 853, 1274
AhdI GACNNNNNGTC 1 cut(s) 517
AjiI CACGTC 1 cut(s) 1184
AjnI CCWGG 2 cut(s) 873, 1342
AluBI AGCT 8 cut(s) 64, 362, 535, 753, 856, 1010, 1069, 1145
AluI AGCT 8 cut(s) 64, 362, 535, 753, 856, 1010, 1069, 1145
Alw26I GTCTC 3 cut(s) 358, 366, 1091
AlwI GGATC 1 cut(s) 1084
Ama87I CYCGRG 1 cut(s) 407
AoxI GGCC 3 cut(s) 136, 1212, 1453
ApoI RAATTY 1 cut(s) 194
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
AspLEI GCGC 3 cut(s) 312, 384, 1381
AspS9I GGNCC 4 cut(s) 1212, 1225, 1243, 1453
AsuC2I CCSGG 1 cut(s) 655
AsuHPI GGTGA 6 cut(s) 596, 739, 1210, 1298, 1433, 1454
AvaI CYCGRG 1 cut(s) 407
AvaII GGWCC 2 cut(s) 1225, 1243
BalI TGGCCA 1 cut(s) 138
BanII GRGCYC 1 cut(s) 1295
BbsI GAAGAC 3 cut(s) 240, 786, 1509
BciT130I CCWGG 2 cut(s) 875, 1344
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 1 cut(s) 655
BcoDI GTCTC 3 cut(s) 358, 366, 1091
BfaI CTAG 4 cut(s) 29, 242, 920, 1130
BfmI CTRYAG 1 cut(s) 357
BfoI RGCGCY 1 cut(s) 1382
BfuAI ACCTGC 1 cut(s) 1068
BmcAI AGTACT 1 cut(s) 1076
Bme1390I CCNGG 3 cut(s) 655, 875, 1344
Bme18I GGWCC 2 cut(s) 1225, 1243
BmeRI GACNNNNNGTC 1 cut(s) 517
BmeT110I CYCGRG 1 cut(s) 407
BmgBI CACGTC 1 cut(s) 1184
BmgT120I GGNCC 4 cut(s) 1212, 1225, 1243, 1453
BmiI GGNNCC 3 cut(s) 1226, 1227, 1245
BmrFI CCNGG 3 cut(s) 655, 875, 1344
BmsI GCATC 2 cut(s) 815, 1111
BpiI GAAGAC 3 cut(s) 240, 786, 1509
BplI GAGNNNNNCTC 2 cut(s) 401, 433
Bpu10I CCTNAGC 1 cut(s) 1354
BpuEI CTTGAG 4 cut(s) 44, 500, 1055, 1281
BpuMI CCSGG 1 cut(s) 655
BsaI GGTCTC 2 cut(s) 358, 366
BsaJI CCNNGG 4 cut(s) 654, 873, 1343, 1466
Bsc4I CCNNNNNNNGG 7 cut(s) 134, 220, 865, 988, 1221, 1349, 1467
Bse1I ACTGG 2 cut(s) 161, 962
BseBI CCWGG 2 cut(s) 875, 1344
BseDI CCNNGG 4 cut(s) 654, 873, 1343, 1466
BseGI GGATG 6 cut(s) 110, 604, 702, 982, 1283, 1343
BseLI CCNNNNNNNGG 7 cut(s) 134, 220, 865, 988, 1221, 1349, 1467
BseMII CTCAG 3 cut(s) 1002, 1140, 1221
BseNI ACTGG 2 cut(s) 161, 962
BseRI GAGGAG 4 cut(s) 203, 409, 412, 1004
BseYI CCCAGC 2 cut(s) 219, 1381
Bsh1236I CGCG 2 cut(s) 310, 320
Bsh1285I CGRYCG 1 cut(s) 510
BshFI GGCC 3 cut(s) 138, 1214, 1455
BsiEI CGRYCG 1 cut(s) 510
BsiHKCI CYCGRG 1 cut(s) 407
BsiSI CCGG 2 cut(s) 394, 654
BslFI GGGAC 4 cut(s) 650, 943, 1106, 1238
BslI CCNNNNNNNGG 7 cut(s) 134, 220, 865, 988, 1221, 1349, 1467
BsmAI GTCTC 3 cut(s) 358, 366, 1091
BsmBI CGTCTC 1 cut(s) 1091
BsmFI GGGAC 4 cut(s) 650, 943, 1106, 1238
BsmI GAATGC 1 cut(s) 275
BsnI GGCC 3 cut(s) 138, 1214, 1455
Bso31I GGTCTC 2 cut(s) 358, 366
BsoBI CYCGRG 1 cut(s) 407
Bsp1286I GDGCHC 1 cut(s) 1295
Bsp143I GATC 3 cut(s) 507, 1089, 1200
BspACI CCGC 5 cut(s) 217, 304, 308, 320, 634
BspANI GGCC 3 cut(s) 138, 1214, 1455
BspCNI CTCAG 3 cut(s) 1003, 1141, 1222
BspFNI CGCG 2 cut(s) 310, 320
BspLI GGNNCC 3 cut(s) 1226, 1227, 1245
BspMI ACCTGC 1 cut(s) 1068
BspPI GGATC 1 cut(s) 1084
BspQI GCTCTTC 2 cut(s) 768, 1044
BspTNI GGTCTC 2 cut(s) 358, 366
BsrI ACTGG 2 cut(s) 161, 962
BssECI CCNNGG 4 cut(s) 654, 873, 1343, 1466
BssMI GATC 3 cut(s) 507, 1089, 1200
BssT1I CCWWGG 1 cut(s) 1466
Bst2UI CCWGG 2 cut(s) 875, 1344
Bst4CI ACNGT 4 cut(s) 26, 352, 693, 1157
Bst6I CTCTTC 6 cut(s) 129, 485, 600, 768, 1044, 1419
BstAPI GCANNNNNTGC 1 cut(s) 1060
BstC8I GCNNGC 4 cut(s) 308, 314, 318, 1351
BstDEI CTNAG 4 cut(s) 1011, 1149, 1230, 1354
BstF5I GGATG 6 cut(s) 110, 604, 702, 982, 1283, 1343
BstFNI CGCG 2 cut(s) 310, 320
BstH2I RGCGCY 1 cut(s) 1382
BstHHI GCGC 3 cut(s) 312, 384, 1381
BstKTI GATC 3 cut(s) 510, 1092, 1203
BstMAI GTCTC 3 cut(s) 358, 366, 1091
BstMBI GATC 3 cut(s) 507, 1089, 1200
BstMCI CGRYCG 1 cut(s) 510
BstMWI GCNNNNNNNGC 2 cut(s) 390, 1060
BstNI CCWGG 2 cut(s) 875, 1344
BstSCI CCNGG 3 cut(s) 653, 873, 1342
BstSFI CTRYAG 1 cut(s) 357
BstUI CGCG 2 cut(s) 310, 320
BstV2I GAAGAC 3 cut(s) 240, 786, 1509
BsuRI GGCC 3 cut(s) 138, 1214, 1455
BtgZI GCGATG 2 cut(s) 563, 1088
BtrI CACGTC 1 cut(s) 1184
BtsCI GGATG 6 cut(s) 110, 604, 702, 982, 1283, 1343
BtsIMutI CAGTG 1 cut(s) 698
BveI ACCTGC 1 cut(s) 1068
Cac8I GCNNGC 4 cut(s) 308, 314, 318, 1351
CfoI GCGC 3 cut(s) 312, 384, 1381
Cfr13I GGNCC 4 cut(s) 1212, 1225, 1243, 1453
CseI GACGC 3 cut(s) 767, 1028, 1108
Csp6I GTAC 6 cut(s) 13, 22, 503, 1075, 1111, 1303
CviAII CATG 5 cut(s) 436, 1094, 1438, 1462, 1510
CviQI GTAC 6 cut(s) 13, 22, 503, 1075, 1111, 1303
DdeI CTNAG 4 cut(s) 1011, 1149, 1230, 1354
DpnI GATC 3 cut(s) 509, 1091, 1202
DpnII GATC 3 cut(s) 507, 1089, 1200
DrdI GACNNNNNNGTC 1 cut(s) 1038
DriI GACNNNNNGTC 1 cut(s) 517
DseDI GACNNNNNNGTC 1 cut(s) 1038
EaeI YGGCCR 1 cut(s) 136
Eam1104I CTCTTC 6 cut(s) 129, 485, 600, 768, 1044, 1419
Eam1105I GACNNNNNGTC 1 cut(s) 517
EarI CTCTTC 6 cut(s) 129, 485, 600, 768, 1044, 1419
Eco130I CCWWGG 1 cut(s) 1466
Eco24I GRGCYC 1 cut(s) 1295
Eco31I GGTCTC 2 cut(s) 358, 366
Eco47I GGWCC 2 cut(s) 1225, 1243
Eco57I CTGAAG 1 cut(s) 780
Eco88I CYCGRG 1 cut(s) 407
EcoO109I RGGNCCY 2 cut(s) 1225, 1243
EcoRII CCWGG 2 cut(s) 873, 1342
EcoT14I CCWWGG 1 cut(s) 1466
EcoT38I GRGCYC 1 cut(s) 1295
ErhI CCWWGG 1 cut(s) 1466
Esp3I CGTCTC 1 cut(s) 1091
FaeI CATG 5 cut(s) 439, 1097, 1441, 1465, 1513
FalI AAGNNNNNCTT 2 cut(s) 453, 485
FaqI GGGAC 4 cut(s) 650, 943, 1106, 1238
FatI CATG 5 cut(s) 435, 1093, 1437, 1461, 1509
FauI CCCGC 3 cut(s) 313, 315, 627
FbaI TGATCA 1 cut(s) 1200
FokI GGATG 6 cut(s) 97, 611, 709, 969, 1290, 1350
FriOI GRGCYC 1 cut(s) 1295
FspBI CTAG 4 cut(s) 29, 242, 920, 1130
GlaI GCGC 3 cut(s) 311, 383, 1380
GsaI CCCAGC 2 cut(s) 223, 1385
HaeII RGCGCY 1 cut(s) 1382
HaeIII GGCC 3 cut(s) 138, 1214, 1455
HapII CCGG 2 cut(s) 394, 654
HgaI GACGC 3 cut(s) 767, 1028, 1108
HhaI GCGC 3 cut(s) 312, 384, 1381
Hin1II CATG 5 cut(s) 439, 1097, 1441, 1465, 1513
Hin6I GCGC 3 cut(s) 310, 382, 1379
HinP1I GCGC 3 cut(s) 310, 382, 1379
HindIII AAGCTT 1 cut(s) 1143
HinfI GANTC 5 cut(s) 55, 100, 478, 869, 1393
HpaII CCGG 2 cut(s) 394, 654
HphI GGTGA 6 cut(s) 596, 739, 1210, 1298, 1433, 1454
Hpy166II GTNNAC 6 cut(s) 166, 528, 646, 880, 1435, 1496
Hpy188I TCNGA 3 cut(s) 483, 799, 1150
Hpy188III TCNNGA 4 cut(s) 409, 953, 986, 1139
Hpy8I GTNNAC 6 cut(s) 166, 528, 646, 880, 1435, 1496
Hpy99I CGWCG 2 cut(s) 783, 890
HpyAV CCTTC 6 cut(s) 398, 619, 1268, 1323, 1423, 1439
HpyCH4III ACNGT 4 cut(s) 26, 352, 693, 1157
HpyCH4IV ACGT 2 cut(s) 11, 1183
HpyCH4V TGCA 3 cut(s) 760, 785, 806
HpyF10VI GCNNNNNNNGC 2 cut(s) 390, 1060
HpyF3I CTNAG 4 cut(s) 1011, 1149, 1230, 1354
HpySE526I ACGT 2 cut(s) 11, 1183
Hsp92II CATG 5 cut(s) 439, 1097, 1441, 1465, 1513
HspAI GCGC 3 cut(s) 310, 382, 1379
KflI GGGWCCC 1 cut(s) 1225
Ksp22I TGATCA 1 cut(s) 1200
Kzo9I GATC 3 cut(s) 507, 1089, 1200
LguI GCTCTTC 2 cut(s) 768, 1044
LmnI GCTCC 2 cut(s) 367, 861
LweI GCATC 2 cut(s) 815, 1111
MaeI CTAG 4 cut(s) 29, 242, 920, 1130
MaeII ACGT 2 cut(s) 11, 1183
MaeIII GTNAC 1 cut(s) 1184
MalI GATC 3 cut(s) 509, 1091, 1202
MboI GATC 3 cut(s) 507, 1089, 1200
MhlI GDGCHC 1 cut(s) 1295
MlsI TGGCCA 1 cut(s) 138
MluCI AATT 5 cut(s) 194, 786, 844, 903, 1311
MluNI TGGCCA 1 cut(s) 138
MmeI TCCRAC 3 cut(s) 726, 1026, 1351
Mox20I TGGCCA 1 cut(s) 138
MscI TGGCCA 1 cut(s) 138
MseI TTAA 4 cut(s) 153, 543, 1257, 1310
Msp20I TGGCCA 1 cut(s) 138
MspA1I CMGCKG 1 cut(s) 219
MspI CCGG 2 cut(s) 394, 654
MspR9I CCNGG 3 cut(s) 655, 875, 1344
Mva1269I GAATGC 1 cut(s) 275
MvaI CCWGG 2 cut(s) 875, 1344
MvnI CGCG 2 cut(s) 310, 320
MwoI GCNNNNNNNGC 2 cut(s) 390, 1060
NciI CCSGG 1 cut(s) 655
NdeII GATC 3 cut(s) 507, 1089, 1200
NlaIII CATG 5 cut(s) 439, 1097, 1441, 1465, 1513
NlaIV GGNNCC 3 cut(s) 1226, 1227, 1245
NmuCI GTSAC 1 cut(s) 1184
PaeR7I CTCGAG 1 cut(s) 407
PciSI GCTCTTC 2 cut(s) 768, 1044
PcsI WCGNNNNNNNCGW 1 cut(s) 545
PctI GAATGC 1 cut(s) 275
PfeI GAWTC 5 cut(s) 55, 100, 478, 869, 1393
Ple19I CGATCG 1 cut(s) 510
PpuMI RGGWCCY 2 cut(s) 1225, 1243
Psp5II RGGWCCY 2 cut(s) 1225, 1243
Psp6I CCWGG 2 cut(s) 873, 1342
PspFI CCCAGC 2 cut(s) 219, 1381
PspGI CCWGG 2 cut(s) 873, 1342
PspN4I GGNNCC 3 cut(s) 1226, 1227, 1245
PspPI GGNCC 4 cut(s) 1212, 1225, 1243, 1453
PspPPI RGGWCCY 2 cut(s) 1225, 1243
PvuI CGATCG 1 cut(s) 510
RsaI GTAC 6 cut(s) 14, 23, 504, 1076, 1112, 1304
RsaNI GTAC 6 cut(s) 13, 22, 503, 1075, 1111, 1303
SapI GCTCTTC 2 cut(s) 768, 1044
SaqAI TTAA 4 cut(s) 153, 543, 1257, 1310
Sau3AI GATC 3 cut(s) 507, 1089, 1200
Sau96I GGNCC 4 cut(s) 1212, 1225, 1243, 1453
ScaI AGTACT 1 cut(s) 1076
ScrFI CCNGG 3 cut(s) 655, 875, 1344
SduI GDGCHC 1 cut(s) 1295
SfaNI GCATC 2 cut(s) 815, 1111
SfcI CTRYAG 1 cut(s) 357
Sfr274I CTCGAG 1 cut(s) 407
SinI GGWCC 2 cut(s) 1225, 1243
SlaI CTCGAG 1 cut(s) 407
SmlI CTYRAG 5 cut(s) 59, 407, 515, 1070, 1296
SmoI CTYRAG 5 cut(s) 59, 407, 515, 1070, 1296
Sse9I AATT 5 cut(s) 194, 786, 844, 903, 1311
SsiI CCGC 5 cut(s) 217, 304, 308, 320, 634
SspMI CTAG 4 cut(s) 29, 242, 920, 1130
StyD4I CCNGG 3 cut(s) 653, 873, 1342
StyI CCWWGG 1 cut(s) 1466
TaaI ACNGT 4 cut(s) 26, 352, 693, 1157
TaiI ACGT 2 cut(s) 14, 1186
TaqI TCGA 5 cut(s) 408, 443, 451, 510, 1473
TasI AATT 5 cut(s) 194, 786, 844, 903, 1311
TatI WGTACW 1 cut(s) 1074
TfiI GAWTC 5 cut(s) 55, 100, 478, 869, 1393
Tru1I TTAA 4 cut(s) 153, 543, 1257, 1310
Tru9I TTAA 4 cut(s) 153, 543, 1257, 1310
TscAI CASTG 1 cut(s) 698
TseFI GTSAC 1 cut(s) 1184
Tsp45I GTSAC 1 cut(s) 1184
TspDTI ATGAA 3 cut(s) 503, 930, 1208
TspGWI ACGGA 4 cut(s) 654, 881, 1032, 1305
TspRI CASTG 1 cut(s) 698
VpaK11BI GGWCC 2 cut(s) 1225, 1243
XapI RAATTY 1 cut(s) 194
XhoI CTCGAG 1 cut(s) 407
XspI CTAG 4 cut(s) 29, 242, 920, 1130
ZrmI AGTACT 1 cut(s) 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.