pycom15g07060

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005176
Physical Location & Seq
Reverse (-)
4300019 .. 4301209
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g07060.1

Sequence Viewer

Length: 699 bp
ATGATTGATAACTTGTTGAAGCTCCAAGAAAAAGAGCCACATGCCTACTCAGACCATATAATCAAAGGAATCATTTTGGTTGTGCTAGTAGCTGGAACAGACACAACATCAACCACCCTGGACTGGGCAATGTCATTGTTGCTAAACCATCCAGAGGCAATGGAGAAAGTGAGAACTGAGATAGACACCAACGTCGGATGCGAGCGTCTGTTGGAAGAGCAAGACTTACCAAAGCTCAAGTACATGGAAAATGTGATCAATGAGACACACCGCTTGTACCCAGCTGTTCCACTTCTAGTGCCTCATGAAGGTTCTGAGGATTGTGTGGTAGGGGAATTCGATGTACCACGTCATACGATGGTGGTGATTAATGCATGGGCCATTCATAGGGACCCGGAGATTTGGGAGGATCCTGATAAGTTTAAGCCAGACAGGTTTCAAGGTTGGAGTGCAGAAGGAGCAGAGATATATAAGCTAATCCCGTTTGGAGGTGGAAGGCGAGGATGTCCAGGCGATTTCATTACCAACCGGCTGATTGGATTGACACTGGGAAGCTTGGTTCAGTCTTTTAAGAGGGGGAGGATTGGTGTAGAAGACGTGGACATGAGTGAAGGTTTGGGTATATATGAGCATGCCGAGGGTCAAGCCCTTGGAGGCTATATGTGCAAACCGCGCCCAATCATGCTGTCTTCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00905 ko00943 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 map00140 map00905 map00943 map01100 map01110 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

233

Amino Acids

26.02

Weight (kDa)

5.03

Isoelectric Point (pI)

36.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 191 4.4e-60 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 191
AccII CGCG 1 cut(s) 673
AciI CCGC 2 cut(s) 271, 671
AclWI GGATC 2 cut(s) 404, 417
AcsI RAATTY 1 cut(s) 335
AfaI GTAC 3 cut(s) 242, 278, 345
AfiI CCNNNNNNNGG 6 cut(s) 123, 124, 154, 308, 387, 488
AgsI TTSAA 2 cut(s) 19, 440
AjiI CACGTC 2 cut(s) 350, 598
AjnI CCWGG 2 cut(s) 117, 508
AloI GAACNNNNNNTCC 2 cut(s) 543, 575
AluBI AGCT 6 cut(s) 22, 92, 235, 284, 475, 555
AluI AGCT 6 cut(s) 22, 92, 235, 284, 475, 555
Alw26I GTCTC 1 cut(s) 257
AlwI GGATC 2 cut(s) 404, 417
AoxI GGCC 1 cut(s) 378
ApoI RAATTY 1 cut(s) 335
AseI ATTAAT 1 cut(s) 369
AspLEI GCGC 1 cut(s) 675
AspS9I GGNCC 2 cut(s) 378, 391
AsuC2I CCSGG 1 cut(s) 395
AsuHPI GGTGA 1 cut(s) 376
AvaII GGWCC 1 cut(s) 391
BamHI GGATCC 1 cut(s) 409
BbsI GAAGAC 2 cut(s) 600, 681
BccI CCATC 2 cut(s) 156, 352
BciT130I CCWGG 2 cut(s) 119, 510
BclI TGATCA 1 cut(s) 255
BcnI CCSGG 1 cut(s) 395
BcoDI GTCTC 1 cut(s) 257
BfaI CTAG 2 cut(s) 86, 296
Bme1390I CCNGG 3 cut(s) 119, 395, 510
Bme18I GGWCC 1 cut(s) 391
BmgBI CACGTC 2 cut(s) 350, 598
BmgT120I GGNCC 2 cut(s) 378, 391
BmiI GGNNCC 3 cut(s) 392, 393, 411
BmrFI CCNGG 3 cut(s) 119, 395, 510
BmrI ACTGGG 2 cut(s) 133, 557
BmsI GCATC 1 cut(s) 188
BmuI ACTGGG 2 cut(s) 133, 557
BpiI GAAGAC 2 cut(s) 600, 681
BpuEI CTTGAG 1 cut(s) 221
BpuMI CCSGG 1 cut(s) 395
BsaJI CCNNGG 3 cut(s) 117, 636, 649
BsaXI ACNNNNNCTCC 2 cut(s) 571, 601
Bsc4I CCNNNNNNNGG 6 cut(s) 123, 124, 154, 308, 387, 488
Bse118I RCCGGY 1 cut(s) 528
Bse1I ACTGG 2 cut(s) 128, 552
Bse3DI GCAATG 2 cut(s) 135, 165
BseBI CCWGG 2 cut(s) 119, 510
BseDI CCNNGG 3 cut(s) 117, 636, 649
BseGI GGATG 3 cut(s) 148, 203, 509
BseLI CCNNNNNNNGG 6 cut(s) 123, 124, 154, 308, 387, 488
BseMI GCAATG 2 cut(s) 135, 165
BseMII CTCAG 3 cut(s) 63, 168, 306
BseNI ACTGG 2 cut(s) 128, 552
BseYI CCCAGC 1 cut(s) 280
BsgI GTGCAG 1 cut(s) 471
Bsh1236I CGCG 1 cut(s) 673
BshFI GGCC 1 cut(s) 380
BsiSI CCGG 2 cut(s) 395, 529
BslFI GGGAC 1 cut(s) 404
BslI CCNNNNNNNGG 6 cut(s) 123, 124, 154, 308, 387, 488
BsmAI GTCTC 1 cut(s) 257
BsmFI GGGAC 1 cut(s) 404
BsnI GGCC 1 cut(s) 380
Bsp143I GATC 2 cut(s) 255, 409
BspACI CCGC 2 cut(s) 271, 671
BspANI GGCC 1 cut(s) 380
BspCNI CTCAG 3 cut(s) 62, 169, 307
BspFNI CGCG 1 cut(s) 673
BspHI TCATGA 1 cut(s) 304
BspLI GGNNCC 3 cut(s) 392, 393, 411
BspPI GGATC 2 cut(s) 404, 417
BspQI GCTCTTC 1 cut(s) 210
BsrDI GCAATG 2 cut(s) 135, 165
BsrFI RCCGGY 1 cut(s) 528
BsrI ACTGG 2 cut(s) 128, 552
BssAI RCCGGY 1 cut(s) 528
BssECI CCNNGG 3 cut(s) 117, 636, 649
BssMI GATC 2 cut(s) 255, 409
BssT1I CCWWGG 1 cut(s) 649
Bst2UI CCWGG 2 cut(s) 119, 510
Bst6I CTCTTC 1 cut(s) 210
BstC8I GCNNGC 2 cut(s) 203, 633
BstDEI CTNAG 3 cut(s) 49, 177, 315
BstENI CCTNNNNNAGG 1 cut(s) 306
BstF5I GGATG 3 cut(s) 148, 203, 509
BstFNI CGCG 1 cut(s) 673
BstHHI GCGC 1 cut(s) 675
BstKTI GATC 2 cut(s) 258, 412
BstMAI GTCTC 1 cut(s) 257
BstMBI GATC 2 cut(s) 255, 409
BstMWI GCNNNNNNNGC 3 cut(s) 458, 663, 672
BstNI CCWGG 2 cut(s) 119, 510
BstNSI RCATGY 2 cut(s) 44, 635
BstSCI CCNGG 3 cut(s) 117, 393, 508
BstUI CGCG 1 cut(s) 673
BstV2I GAAGAC 2 cut(s) 600, 681
BstX2I RGATCY 1 cut(s) 409
BstYI RGATCY 1 cut(s) 409
BsuRI GGCC 1 cut(s) 380
BtrI CACGTC 2 cut(s) 350, 598
BtsCI GGATG 3 cut(s) 148, 203, 509
BtsIMutI CAGTG 1 cut(s) 545
Cac8I GCNNGC 2 cut(s) 203, 633
CciI TCATGA 1 cut(s) 304
CfoI GCGC 1 cut(s) 675
Cfr10I RCCGGY 1 cut(s) 528
Cfr13I GGNCC 2 cut(s) 378, 391
CseI GACGC 1 cut(s) 194
Csp6I GTAC 3 cut(s) 241, 277, 344
CviAII CATG 8 cut(s) 41, 244, 305, 375, 604, 632, 682, 694
CviQI GTAC 3 cut(s) 241, 277, 344
DdeI CTNAG 3 cut(s) 49, 177, 315
DpnI GATC 2 cut(s) 257, 411
DpnII GATC 2 cut(s) 255, 409
DrdI GACNNNNNNGTC 1 cut(s) 191
DseDI GACNNNNNNGTC 1 cut(s) 191
Eam1104I CTCTTC 1 cut(s) 210
EarI CTCTTC 1 cut(s) 210
Eco130I CCWWGG 1 cut(s) 649
Eco47I GGWCC 1 cut(s) 391
EcoNI CCTNNNNNAGG 1 cut(s) 306
EcoO109I RGGNCCY 1 cut(s) 391
EcoRI GAATTC 1 cut(s) 335
EcoRII CCWGG 2 cut(s) 117, 508
EcoT14I CCWWGG 1 cut(s) 649
EcoT22I ATGCAT 1 cut(s) 376
ErhI CCWWGG 1 cut(s) 649
FaeI CATG 8 cut(s) 44, 247, 308, 378, 607, 635, 685, 697
FaqI GGGAC 1 cut(s) 404
FatI CATG 8 cut(s) 40, 243, 304, 374, 603, 631, 681, 693
FbaI TGATCA 1 cut(s) 255
FokI GGATG 3 cut(s) 135, 210, 516
FspBI CTAG 2 cut(s) 86, 296
GlaI GCGC 1 cut(s) 674
GsaI CCCAGC 1 cut(s) 284
HaeIII GGCC 1 cut(s) 380
HapII CCGG 2 cut(s) 395, 529
HgaI GACGC 1 cut(s) 194
HhaI GCGC 1 cut(s) 675
Hin1II CATG 8 cut(s) 44, 247, 308, 378, 607, 635, 685, 697
Hin6I GCGC 1 cut(s) 673
HinP1I GCGC 1 cut(s) 673
HindIII AAGCTT 1 cut(s) 553
HinfI GANTC 1 cut(s) 69
HpaII CCGG 2 cut(s) 395, 529
HphI GGTGA 1 cut(s) 376
Hpy166II GTNNAC 1 cut(s) 601
Hpy188I TCNGA 3 cut(s) 52, 197, 316
Hpy188III TCNNGA 3 cut(s) 152, 305, 413
Hpy8I GTNNAC 1 cut(s) 601
Hpy99I CGWCG 1 cut(s) 197
HpyAV CCTTC 4 cut(s) 302, 449, 489, 605
HpyCH4IV ACGT 3 cut(s) 192, 349, 597
HpyCH4V TGCA 3 cut(s) 374, 452, 666
HpyF10VI GCNNNNNNNGC 3 cut(s) 458, 663, 672
HpyF3I CTNAG 3 cut(s) 49, 177, 315
HpySE526I ACGT 3 cut(s) 192, 349, 597
Hsp92II CATG 8 cut(s) 44, 247, 308, 378, 607, 635, 685, 697
HspAI GCGC 1 cut(s) 673
KflI GGGWCCC 1 cut(s) 391
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 2 cut(s) 255, 409
LguI GCTCTTC 1 cut(s) 210
LmnI GCTCC 2 cut(s) 27, 458
LweI GCATC 1 cut(s) 188
MaeI CTAG 2 cut(s) 86, 296
MaeII ACGT 3 cut(s) 192, 349, 597
MalI GATC 2 cut(s) 257, 411
MboI GATC 2 cut(s) 255, 409
MboII GAAGA 3 cut(s) 227, 605, 681
MflI RGATCY 1 cut(s) 409
MluCI AATT 1 cut(s) 335
MmeI TCCRAC 3 cut(s) 175, 192, 425
Mph1103I ATGCAT 1 cut(s) 376
MseI TTAA 3 cut(s) 369, 423, 570
MspA1I CMGCKG 1 cut(s) 284
MspI CCGG 2 cut(s) 395, 529
MspR9I CCNGG 3 cut(s) 119, 395, 510
MvaI CCWGG 2 cut(s) 119, 510
MvnI CGCG 1 cut(s) 673
MwoI GCNNNNNNNGC 3 cut(s) 458, 663, 672
NciI CCSGG 1 cut(s) 395
NdeII GATC 2 cut(s) 255, 409
NlaIII CATG 8 cut(s) 44, 247, 308, 378, 607, 635, 685, 697
NlaIV GGNNCC 3 cut(s) 392, 393, 411
NmeAIII GCCGAG 1 cut(s) 661
NsiI ATGCAT 1 cut(s) 376
NspI RCATGY 2 cut(s) 44, 635
PaeI GCATGC 1 cut(s) 635
PagI TCATGA 1 cut(s) 304
PciSI GCTCTTC 1 cut(s) 210
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PfeI GAWTC 1 cut(s) 69
PpuMI RGGWCCY 1 cut(s) 391
PshBI ATTAAT 1 cut(s) 369
Psp5II RGGWCCY 1 cut(s) 391
Psp6I CCWGG 2 cut(s) 117, 508
PspFI CCCAGC 1 cut(s) 280
PspGI CCWGG 2 cut(s) 117, 508
PspN4I GGNNCC 3 cut(s) 392, 393, 411
PspPI GGNCC 2 cut(s) 378, 391
PspPPI RGGWCCY 1 cut(s) 391
PsuI RGATCY 1 cut(s) 409
PvuII CAGCTG 1 cut(s) 284
RsaI GTAC 3 cut(s) 242, 278, 345
RsaNI GTAC 3 cut(s) 241, 277, 344
SapI GCTCTTC 1 cut(s) 210
SaqAI TTAA 3 cut(s) 369, 423, 570
Sau3AI GATC 2 cut(s) 255, 409
Sau96I GGNCC 2 cut(s) 378, 391
ScrFI CCNGG 3 cut(s) 119, 395, 510
SfaNI GCATC 1 cut(s) 188
SinI GGWCC 1 cut(s) 391
SmlI CTYRAG 1 cut(s) 236
SmoI CTYRAG 1 cut(s) 236
SphI GCATGC 1 cut(s) 635
Sse9I AATT 1 cut(s) 335
SsiI CCGC 2 cut(s) 271, 671
SspMI CTAG 2 cut(s) 86, 296
StyD4I CCNGG 3 cut(s) 117, 393, 508
StyI CCWWGG 1 cut(s) 649
TaiI ACGT 3 cut(s) 195, 352, 600
TaqI TCGA 1 cut(s) 339
TasI AATT 1 cut(s) 335
TatI WGTACW 1 cut(s) 240
TfiI GAWTC 1 cut(s) 69
Tru1I TTAA 3 cut(s) 369, 423, 570
Tru9I TTAA 3 cut(s) 369, 423, 570
TscAI CASTG 1 cut(s) 552
TspDTI ATGAA 3 cut(s) 321, 374, 508
TspRI CASTG 1 cut(s) 552
VpaK11BI GGWCC 1 cut(s) 391
VspI ATTAAT 1 cut(s) 369
XagI CCTNNNNNAGG 1 cut(s) 306
XapI RAATTY 1 cut(s) 335
XceI RCATGY 2 cut(s) 44, 635
XspI CTAG 2 cut(s) 86, 296
Zsp2I ATGCAT 1 cut(s) 376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.