RLG00000010605

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0005176
Physical Location & Seq
Forward (+)
2911015 .. 2911732
718 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010605

Sequence Viewer

Length: 429 bp
ATGGTGAGCGTGATAGCCAAGATGGACAGTTTCTTGCAGGCCACAGTTTCGGATCTTCACGAAACTTTGTCATCAAATTGTGATCAAAATAAGGGAGGACAGGTCAGGAAGATACTGCTTGATAACTTACTGCCGCTTCAACAAACAGAACCAGAGCTCTACACTGACGAGATCATCAAAGGCATAATTCTGGCGTTGTTGGTGGCCGAGACAGAGACTGATTCAACCACATTAGAATGGACAATGTCACTATTGCTGAACCATCCAGATCAGTTGGATCAAGTCAGAGCTGAGATTGACTTCAAGGTTAGACAAGGGCGTCTGTTGGATGAGCAAGACTTGCCAAATCTGAATTACTTACAAATTGTGATCAATGAGACACTGCGCTTGTACCCTTCTGTTATGCTTTTAGGGGTTCTTGATGTGTGA

Protein Analysis

143

Amino Acids

16.06

Weight (kDa)

4.32

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 4 - 135 1.4e-22 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 318
AciI CCGC 1 cut(s) 134
AclWI GGATC 2 cut(s) 60, 285
AcoI YGGCCR 1 cut(s) 204
AcyI GRCGYC 1 cut(s) 319
AfaI GTAC 1 cut(s) 392
AgsI TTSAA 3 cut(s) 140, 225, 304
AluBI AGCT 2 cut(s) 157, 290
AluI AGCT 2 cut(s) 157, 290
Alw21I GWGCWC 1 cut(s) 159
Alw26I GTCTC 3 cut(s) 203, 209, 371
AlwI GGATC 2 cut(s) 60, 285
AlwNI CAGNNNCTG 1 cut(s) 218
AoxI GGCC 2 cut(s) 39, 204
AspLEI GCGC 1 cut(s) 387
AsuHPI GGTGA 1 cut(s) 16
BanII GRGCYC 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 159
BccI CCATC 2 cut(s) 16, 270
BclI TGATCA 2 cut(s) 82, 369
BcoDI GTCTC 3 cut(s) 203, 209, 371
BisI GCNGC 1 cut(s) 134
BlsI GCNGC 1 cut(s) 135
BsaHI GRCGYC 1 cut(s) 319
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
BseGI GGATG 2 cut(s) 262, 334
BseMII CTCAG 1 cut(s) 282
BshFI GGCC 2 cut(s) 41, 206
BsiHKAI GWGCWC 1 cut(s) 159
BsmAI GTCTC 3 cut(s) 203, 209, 371
BsnI GGCC 2 cut(s) 41, 206
Bsp1286I GDGCHC 1 cut(s) 159
Bsp143I GATC 6 cut(s) 52, 82, 171, 268, 277, 369
BspACI CCGC 1 cut(s) 134
BspANI GGCC 2 cut(s) 41, 206
BspCNI CTCAG 1 cut(s) 283
BspPI GGATC 2 cut(s) 60, 285
BssMI GATC 6 cut(s) 52, 82, 171, 268, 277, 369
BssNI GRCGYC 1 cut(s) 319
Bst4CI ACNGT 2 cut(s) 29, 46
BstACI GRCGYC 1 cut(s) 319
BstAPI GCANNNNNTGC 1 cut(s) 340
BstC8I GCNNGC 1 cut(s) 39
BstDEI CTNAG 1 cut(s) 291
BstF5I GGATG 2 cut(s) 262, 334
BstHHI GCGC 1 cut(s) 387
BstKTI GATC 6 cut(s) 55, 85, 174, 271, 280, 372
BstMAI GTCTC 3 cut(s) 203, 209, 371
BstMBI GATC 6 cut(s) 52, 82, 171, 268, 277, 369
BstMWI GCNNNNNNNGC 1 cut(s) 340
BstX2I RGATCY 1 cut(s) 52
BstYI RGATCY 1 cut(s) 52
BsuRI GGCC 2 cut(s) 41, 206
BtsCI GGATG 2 cut(s) 262, 334
BtsI GCAGTG 1 cut(s) 380
BtsIMutI CAGTG 2 cut(s) 162, 380
Cac8I GCNNGC 1 cut(s) 39
CaiI CAGNNNCTG 1 cut(s) 218
CfoI GCGC 1 cut(s) 387
CseI GACGC 1 cut(s) 308
Csp6I GTAC 1 cut(s) 391
CviJI RGCY 5 cut(s) 17, 41, 157, 206, 290
CviKI_1 RGCY 5 cut(s) 17, 41, 157, 206, 290
CviQI GTAC 1 cut(s) 391
DdeI CTNAG 1 cut(s) 291
DpnI GATC 6 cut(s) 54, 84, 173, 270, 279, 371
DpnII GATC 6 cut(s) 52, 82, 171, 268, 277, 369
DrdI GACNNNNNNGTC 1 cut(s) 318
DseDI GACNNNNNNGTC 1 cut(s) 318
EaeI YGGCCR 1 cut(s) 204
Ecl136II GAGCTC 1 cut(s) 157
Eco24I GRGCYC 1 cut(s) 159
Eco53kI GAGCTC 1 cut(s) 157
EcoICRI GAGCTC 1 cut(s) 157
EcoT38I GRGCYC 1 cut(s) 159
FaiI YATR 2 cut(s) 185, 404
FbaI TGATCA 2 cut(s) 82, 369
Fnu4HI GCNGC 1 cut(s) 134
FokI GGATG 2 cut(s) 249, 341
FriOI GRGCYC 1 cut(s) 159
Fsp4HI GCNGC 1 cut(s) 134
GlaI GCGC 1 cut(s) 386
GluI GCNGC 1 cut(s) 134
HaeIII GGCC 2 cut(s) 41, 206
HgaI GACGC 1 cut(s) 308
HhaI GCGC 1 cut(s) 387
Hin1I GRCGYC 1 cut(s) 319
Hin6I GCGC 1 cut(s) 385
HinP1I GCGC 1 cut(s) 385
HinfI GANTC 1 cut(s) 221
HphI GGTGA 1 cut(s) 16
Hpy188I TCNGA 3 cut(s) 52, 287, 351
Hpy188III TCNNGA 4 cut(s) 59, 106, 266, 419
HpyAV CCTTC 1 cut(s) 405
HpyCH4III ACNGT 2 cut(s) 29, 46
HpyCH4V TGCA 1 cut(s) 37
HpyF10VI GCNNNNNNNGC 1 cut(s) 340
HpyF3I CTNAG 1 cut(s) 291
Hsp92I GRCGYC 1 cut(s) 319
HspAI GCGC 1 cut(s) 385
Ksp22I TGATCA 2 cut(s) 82, 369
Kzo9I GATC 6 cut(s) 52, 82, 171, 268, 277, 369
LpnPI CCDG 6 cut(s) 23, 86, 91, 165, 176, 279
MaeIII GTNAC 1 cut(s) 246
MalI GATC 6 cut(s) 54, 84, 173, 270, 279, 371
MboI GATC 6 cut(s) 52, 82, 171, 268, 277, 369
MboII GAAGA 2 cut(s) 47, 121
MflI RGATCY 1 cut(s) 52
MhlI GDGCHC 1 cut(s) 159
MluCI AATT 4 cut(s) 76, 186, 352, 363
MmeI TCCRAC 2 cut(s) 255, 306
MnlI CCTC 1 cut(s) 89
MslI CAYNNNNRTG 1 cut(s) 235
MwoI GCNNNNNNNGC 1 cut(s) 340
NdeII GATC 6 cut(s) 52, 82, 171, 268, 277, 369
NmeAIII GCCGAG 1 cut(s) 232
NmuCI GTSAC 1 cut(s) 246
PfeI GAWTC 1 cut(s) 221
PflFI GACNNNGTC 1 cut(s) 244
PkrI GCNGC 1 cut(s) 135
Psp124BI GAGCTC 1 cut(s) 159
PstNI CAGNNNCTG 1 cut(s) 218
PsuI RGATCY 1 cut(s) 52
PsyI GACNNNGTC 1 cut(s) 244
RsaI GTAC 1 cut(s) 392
RsaNI GTAC 1 cut(s) 391
RseI CAYNNNNRTG 1 cut(s) 235
SacI GAGCTC 1 cut(s) 159
SatI GCNGC 1 cut(s) 134
Sau3AI GATC 6 cut(s) 52, 82, 171, 268, 277, 369
SduI GDGCHC 1 cut(s) 159
SetI ASST 4 cut(s) 105, 159, 292, 309
SmiMI CAYNNNNRTG 1 cut(s) 235
Sse9I AATT 4 cut(s) 76, 186, 352, 363
SsiI CCGC 1 cut(s) 134
SstI GAGCTC 1 cut(s) 159
TaaI ACNGT 2 cut(s) 29, 46
TasI AATT 4 cut(s) 76, 186, 352, 363
TauI GCSGC 1 cut(s) 136
TfiI GAWTC 1 cut(s) 221
TscAI CASTG 2 cut(s) 169, 387
TseFI GTSAC 1 cut(s) 246
Tsp45I GTSAC 1 cut(s) 246
TspRI CASTG 2 cut(s) 169, 387
Tth111I GACNNNGTC 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.