pycom08g07380

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0005176
Physical Location & Seq
Reverse (-)
5965695 .. 5968345
2651 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g07380.1

Sequence Viewer

Length: 1125 bp
ATGACTCTCGAGTTCTTCTCCTCCTCCCGCCTCGCCGCGTTTTCAACCGTCCGGCGAGGAGAAGTCCGTCTCTTACTGAACCAGATCATGAAGAAATCAAAGGTCGAGCTCAAGTCCAAATTTACGGAGCTTGCGTTCAACGTGATGACGATGACGGTGGTGGGGAAGCGGTACTTCGGCGAAGACGTGGCAGACGACGAGGAGGCAAAGAGTTTCCGGGAGGTTATGAGGGAGGCCGTGCACCTATCGGCGGCGACGAATTTGGGAGATTTTTTGCCGGTTTTGCAGTGGTTGGATGCGACGGGTTTGGAGAAGAAGATGGTGAGGCTGATGAAAAAGATGGACGGCTTCTTGCAGAGTTTGATTGTGGAGCGCCGTGGGATTTTGGCGGCGGGTTTTGAAACGAACGGCGAAGAGTTGAAGAAGTTGATGATCGACAACTTTTTGGCGTTGCAACAAGCAGATCCCCACTTATATACCGACGAAATCGTCAAGGGAATCATTTTGGTGTTGCTGGTAGCTGGGACAGACACAACATCAACAACCCTAGAATGGGCAATGGCACTATTGCTAAACCATCCAGGTGCAATGGCGAAATTAAGAGCCGAGATAGATACCAAGACTGGATCTGATCATCGTCTGTTGGAAGAGCAAGACTTGCCGAACCTGAACTACTTGCAAAATGTAATCAACGAAACGTATCGTTTGTACCCTTCATTTCCAATTCTAGTGCCTCATGAAAACTCAGAGGACTGTGTGGTAGGGGGATTCAACGTGCCGCGTCACACAATGCTCGTGATCAATGCGTGGGCTATCCACAGGAACCCTGAGATATGGGAGGACCCCGAAAAGTTTAAGCCGGAGAGGTTTGAAGGGTGGAGTGGTGAGGGGTCCGAAGGGTATAAGCTGATTCCATTTGGGGCTGGAAGGCGACGGTGTCCTGGGGCCAGCCTCGCGAACAGGTTGGTTGGGTTGGCGCTGGGAAGCTTGGTTCAGTCGTTTGAGTGGGAGAGGATTGGTGAAGAGGAGGTGGATATGAGTGAGGTTTCGGGGCTTACCATGCCAAGGGTCAAGCCCTTGGAGGGTATTTGCAAGCCACGCCCAATCATGCTATCTTCCGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00905 ko00943 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 map00140 map00905 map00943 map01100 map01110 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

375

Amino Acids

42.09

Weight (kDa)

5.57

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 4 - 356 2.7e-78 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 488
AccII CGCG 3 cut(s) 38, 781, 956
AciI CCGC 7 cut(s) 28, 36, 169, 251, 389, 392, 779
AclWI GGATC 2 cut(s) 458, 634
AcsI RAATTY 2 cut(s) 119, 259
AfaI GTAC 2 cut(s) 173, 710
AfiI CCNNNNNNNGG 5 cut(s) 250, 552, 553, 1065, 1082
AgsI TTSAA 6 cut(s) 45, 139, 401, 421, 772, 872
AjiI CACGTC 1 cut(s) 187
AjnI CCWGG 2 cut(s) 580, 940
AloI GAACNNNNNNTCC 4 cut(s) 119, 151, 975, 1007
AluBI AGCT 5 cut(s) 109, 130, 521, 907, 987
AluI AGCT 5 cut(s) 109, 130, 521, 907, 987
Alw21I GWGCWC 2 cut(s) 111, 243
Alw26I GTCTC 1 cut(s) 74
Alw44I GTGCAC 1 cut(s) 239
AlwI GGATC 2 cut(s) 458, 634
Ama87I CYCGRG 1 cut(s) 8
AoxI GGCC 2 cut(s) 234, 945
ApaLI GTGCAC 1 cut(s) 239
ApoI RAATTY 2 cut(s) 119, 259
AspLEI GCGC 2 cut(s) 375, 979
AspS9I GGNCC 3 cut(s) 841, 891, 945
AsuC2I CCSGG 1 cut(s) 218
AsuHPI GGTGA 3 cut(s) 334, 896, 1031
AvaI CYCGRG 1 cut(s) 8
AvaII GGWCC 2 cut(s) 841, 891
BaeGI GKGCMC 1 cut(s) 243
BanII GRGCYC 1 cut(s) 111
BauI CACGAG 1 cut(s) 794
BbsI GAAGAC 1 cut(s) 189
Bbv12I GWGCWC 2 cut(s) 111, 243
BccI CCATC 3 cut(s) 313, 334, 585
BceAI ACGGC 4 cut(s) 221, 360, 361, 424
BciT130I CCWGG 2 cut(s) 582, 942
BclI TGATCA 2 cut(s) 631, 798
BcnI CCSGG 1 cut(s) 218
BcoDI GTCTC 1 cut(s) 74
BfaI CTAG 2 cut(s) 548, 728
BfoI RGCGCY 2 cut(s) 376, 980
BisI GCNGC 4 cut(s) 36, 252, 390, 779
BlsI GCNGC 4 cut(s) 37, 253, 391, 780
Bme1390I CCNGG 3 cut(s) 218, 582, 942
Bme18I GGWCC 2 cut(s) 841, 891
BmeT110I CYCGRG 1 cut(s) 8
BmgBI CACGTC 1 cut(s) 187
BmgT120I GGNCC 3 cut(s) 841, 891, 945
BmiI GGNNCC 4 cut(s) 824, 843, 892, 946
BmrFI CCNGG 3 cut(s) 218, 582, 942
BmsI GCATC 1 cut(s) 286
BpiI GAAGAC 1 cut(s) 189
BplI GAGNNNNNCTC 1 cut(s) 34
BpuEI CTTGAG 1 cut(s) 95
BpuMI CCSGG 1 cut(s) 218
BsaJI CCNNGG 4 cut(s) 376, 941, 1064, 1077
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 5 cut(s) 250, 552, 553, 1065, 1082
Bse118I RCCGGY 1 cut(s) 277
Bse1I ACTGG 1 cut(s) 628
Bse3DI GCAATG 2 cut(s) 564, 594
BseBI CCWGG 2 cut(s) 582, 942
BseDI CCNNGG 4 cut(s) 376, 941, 1064, 1077
BseGI GGATG 2 cut(s) 301, 577
BseLI CCNNNNNNNGG 5 cut(s) 250, 552, 553, 1065, 1082
BseMI GCAATG 2 cut(s) 564, 594
BseMII CTCAG 2 cut(s) 759, 819
BseNI ACTGG 1 cut(s) 628
BseRI GAGGAG 5 cut(s) 10, 13, 72, 215, 1040
BseSI GKGCMC 1 cut(s) 243
BseYI CCCAGC 2 cut(s) 521, 979
Bsh1236I CGCG 3 cut(s) 38, 781, 956
BshFI GGCC 2 cut(s) 236, 947
BsiHKAI GWGCWC 2 cut(s) 111, 243
BsiHKCI CYCGRG 1 cut(s) 8
BsiSI CCGG 4 cut(s) 52, 217, 278, 860
BslFI GGGAC 1 cut(s) 538
BslI CCNNNNNNNGG 5 cut(s) 250, 552, 553, 1065, 1082
BsmAI GTCTC 1 cut(s) 74
BsmBI CGTCTC 1 cut(s) 74
BsmFI GGGAC 1 cut(s) 538
BsnI GGCC 2 cut(s) 236, 947
BsoBI CYCGRG 1 cut(s) 8
Bsp1286I GDGCHC 2 cut(s) 111, 243
Bsp143I GATC 6 cut(s) 84, 432, 463, 626, 631, 798
Bsp68I TCGCGA 1 cut(s) 956
BspACI CCGC 7 cut(s) 28, 36, 169, 251, 389, 392, 779
BspANI GGCC 2 cut(s) 236, 947
BspCNI CTCAG 2 cut(s) 758, 820
BspFNI CGCG 3 cut(s) 38, 781, 956
BspHI TCATGA 2 cut(s) 87, 736
BspLI GGNNCC 4 cut(s) 824, 843, 892, 946
BspPI GGATC 2 cut(s) 458, 634
BspQI GCTCTTC 1 cut(s) 642
BsrDI GCAATG 2 cut(s) 564, 594
BsrFI RCCGGY 1 cut(s) 277
BsrI ACTGG 1 cut(s) 628
BssAI RCCGGY 1 cut(s) 277
BssECI CCNNGG 4 cut(s) 376, 941, 1064, 1077
BssMI GATC 6 cut(s) 84, 432, 463, 626, 631, 798
BssSI CACGAG 1 cut(s) 794
BssT1I CCWWGG 2 cut(s) 1064, 1077
Bst2BI CACGAG 1 cut(s) 794
Bst2UI CCWGG 2 cut(s) 582, 942
Bst4CI ACNGT 4 cut(s) 49, 157, 755, 936
Bst6I CTCTTC 3 cut(s) 408, 642, 1017
BstAPI GCANNNNNTGC 1 cut(s) 658
BstC8I GCNNGC 3 cut(s) 132, 949, 1094
BstDEI CTNAG 2 cut(s) 745, 828
BstDSI CCRYGG 1 cut(s) 376
BstF5I GGATG 2 cut(s) 301, 577
BstFNI CGCG 3 cut(s) 38, 781, 956
BstH2I RGCGCY 2 cut(s) 376, 980
BstHHI GCGC 2 cut(s) 375, 979
BstKTI GATC 6 cut(s) 87, 435, 466, 629, 634, 801
BstMAI GTCTC 1 cut(s) 74
BstMBI GATC 6 cut(s) 84, 432, 463, 626, 631, 798
BstMWI GCNNNNNNNGC 5 cut(s) 283, 658, 953, 1060, 1098
BstNI CCWGG 2 cut(s) 582, 942
BstSCI CCNGG 3 cut(s) 216, 580, 940
BstSLI GKGCMC 1 cut(s) 243
BstUI CGCG 3 cut(s) 38, 781, 956
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 2 cut(s) 463, 626
BstYI RGATCY 2 cut(s) 463, 626
BsuRI GGCC 2 cut(s) 236, 947
BtgI CCRYGG 1 cut(s) 376
BtrI CACGTC 1 cut(s) 187
BtsCI GGATG 2 cut(s) 301, 577
BtsI GCAGTG 1 cut(s) 293
BtsIMutI CAGTG 1 cut(s) 293
BtuMI TCGCGA 1 cut(s) 956
Cac8I GCNNGC 3 cut(s) 132, 949, 1094
CciI TCATGA 2 cut(s) 87, 736
CfoI GCGC 2 cut(s) 375, 979
Cfr10I RCCGGY 1 cut(s) 277
Cfr13I GGNCC 3 cut(s) 841, 891, 945
CseI GACGC 1 cut(s) 770
Csp6I GTAC 2 cut(s) 172, 709
CviAII CATG 4 cut(s) 88, 737, 1060, 1108
CviQI GTAC 2 cut(s) 172, 709
DdeI CTNAG 2 cut(s) 745, 828
DpnI GATC 6 cut(s) 86, 434, 465, 628, 633, 800
DpnII GATC 6 cut(s) 84, 432, 463, 626, 631, 798
DrdI GACNNNNNNGTC 1 cut(s) 488
DseDI GACNNNNNNGTC 1 cut(s) 488
Eam1104I CTCTTC 3 cut(s) 408, 642, 1017
EarI CTCTTC 3 cut(s) 408, 642, 1017
Ecl136II GAGCTC 1 cut(s) 109
Eco130I CCWWGG 2 cut(s) 1064, 1077
Eco24I GRGCYC 1 cut(s) 111
Eco47I GGWCC 2 cut(s) 841, 891
Eco53kI GAGCTC 1 cut(s) 109
Eco88I CYCGRG 1 cut(s) 8
EcoICRI GAGCTC 1 cut(s) 109
EcoO109I RGGNCCY 1 cut(s) 841
EcoRII CCWGG 2 cut(s) 580, 940
EcoT14I CCWWGG 2 cut(s) 1064, 1077
EcoT38I GRGCYC 1 cut(s) 111
ErhI CCWWGG 2 cut(s) 1064, 1077
Esp3I CGTCTC 1 cut(s) 74
FaeI CATG 4 cut(s) 91, 740, 1063, 1111
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FaqI GGGAC 1 cut(s) 538
FatI CATG 4 cut(s) 87, 736, 1059, 1107
FauI CCCGC 2 cut(s) 35, 385
FbaI TGATCA 2 cut(s) 631, 798
Fnu4HI GCNGC 4 cut(s) 36, 252, 390, 779
FokI GGATG 2 cut(s) 308, 564
FriOI GRGCYC 1 cut(s) 111
Fsp4HI GCNGC 4 cut(s) 36, 252, 390, 779
FspBI CTAG 2 cut(s) 548, 728
GlaI GCGC 2 cut(s) 374, 978
GluI GCNGC 4 cut(s) 36, 252, 390, 779
GsaI CCCAGC 2 cut(s) 525, 983
HaeII RGCGCY 2 cut(s) 376, 980
HaeIII GGCC 2 cut(s) 236, 947
HapII CCGG 4 cut(s) 52, 217, 278, 860
HgaI GACGC 1 cut(s) 770
HhaI GCGC 2 cut(s) 375, 979
Hin1II CATG 4 cut(s) 91, 740, 1063, 1111
Hin6I GCGC 2 cut(s) 373, 977
HinP1I GCGC 2 cut(s) 373, 977
HindIII AAGCTT 1 cut(s) 985
HinfI GANTC 4 cut(s) 4, 498, 768, 910
HpaII CCGG 4 cut(s) 52, 217, 278, 860
HphI GGTGA 3 cut(s) 334, 896, 1031
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 3 cut(s) 631, 748, 895
Hpy188III TCNNGA 5 cut(s) 8, 88, 737, 796, 955
Hpy8I GTNNAC 1 cut(s) 241
Hpy99I CGWCG 5 cut(s) 200, 259, 304, 485, 936
HpyAV CCTTC 4 cut(s) 723, 866, 890, 921
HpyCH4III ACNGT 4 cut(s) 49, 157, 755, 936
HpyCH4IV ACGT 4 cut(s) 141, 186, 698, 774
HpyCH4V TGCA 7 cut(s) 241, 286, 355, 454, 587, 679, 1092
HpyF10VI GCNNNNNNNGC 5 cut(s) 283, 658, 953, 1060, 1098
HpyF3I CTNAG 2 cut(s) 745, 828
HpySE526I ACGT 4 cut(s) 141, 186, 698, 774
Hsp92II CATG 4 cut(s) 91, 740, 1063, 1111
HspAI GCGC 2 cut(s) 373, 977
Ksp22I TGATCA 2 cut(s) 631, 798
Kzo9I GATC 6 cut(s) 84, 432, 463, 626, 631, 798
LguI GCTCTTC 1 cut(s) 642
LmnI GCTCC 2 cut(s) 127, 370
LweI GCATC 1 cut(s) 286
MaeI CTAG 2 cut(s) 548, 728
MaeII ACGT 4 cut(s) 141, 186, 698, 774
MaeIII GTNAC 1 cut(s) 782
MalI GATC 6 cut(s) 86, 434, 465, 628, 633, 800
MboI GATC 6 cut(s) 84, 432, 463, 626, 631, 798
MflI RGATCY 2 cut(s) 463, 626
MhlI GDGCHC 2 cut(s) 111, 243
MluCI AATT 4 cut(s) 119, 259, 596, 723
MmeI TCCRAC 2 cut(s) 273, 624
MseI TTAA 3 cut(s) 599, 855, 1123
MslI CAYNNNNRTG 2 cut(s) 506, 582
MspI CCGG 4 cut(s) 52, 217, 278, 860
MspR9I CCNGG 3 cut(s) 218, 582, 942
MvaI CCWGG 2 cut(s) 582, 942
MvnI CGCG 3 cut(s) 38, 781, 956
MwoI GCNNNNNNNGC 5 cut(s) 283, 658, 953, 1060, 1098
NciI CCSGG 1 cut(s) 218
NdeII GATC 6 cut(s) 84, 432, 463, 626, 631, 798
NlaIII CATG 4 cut(s) 91, 740, 1063, 1111
NlaIV GGNNCC 4 cut(s) 824, 843, 892, 946
NmeAIII GCCGAG 1 cut(s) 631
NmuCI GTSAC 1 cut(s) 782
NruI TCGCGA 1 cut(s) 956
PaeR7I CTCGAG 1 cut(s) 8
PagI TCATGA 2 cut(s) 87, 736
PciSI GCTCTTC 1 cut(s) 642
PcsI WCGNNNNNNNCGW 4 cut(s) 131, 183, 192, 254
PfeI GAWTC 3 cut(s) 498, 768, 910
PflFI GACNNNGTC 1 cut(s) 936
PfoI TCCNGGA 1 cut(s) 216
PkrI GCNGC 4 cut(s) 37, 253, 391, 780
PpuMI RGGWCCY 1 cut(s) 841
Psp124BI GAGCTC 1 cut(s) 111
Psp5II RGGWCCY 1 cut(s) 841
Psp6I CCWGG 2 cut(s) 580, 940
PspFI CCCAGC 2 cut(s) 521, 979
PspGI CCWGG 2 cut(s) 580, 940
PspN4I GGNNCC 4 cut(s) 824, 843, 892, 946
PspPI GGNCC 3 cut(s) 841, 891, 945
PspPPI RGGWCCY 1 cut(s) 841
PsrI GAACNNNNNNTAC 2 cut(s) 656, 688
PsuI RGATCY 2 cut(s) 463, 626
PsyI GACNNNGTC 1 cut(s) 936
RruI TCGCGA 1 cut(s) 956
RsaI GTAC 2 cut(s) 173, 710
RsaNI GTAC 2 cut(s) 172, 709
RseI CAYNNNNRTG 2 cut(s) 506, 582
SacI GAGCTC 1 cut(s) 111
SapI GCTCTTC 1 cut(s) 642
SaqAI TTAA 3 cut(s) 599, 855, 1123
SatI GCNGC 4 cut(s) 36, 252, 390, 779
Sau3AI GATC 6 cut(s) 84, 432, 463, 626, 631, 798
Sau96I GGNCC 3 cut(s) 841, 891, 945
ScrFI CCNGG 3 cut(s) 218, 582, 942
SduI GDGCHC 2 cut(s) 111, 243
SfaNI GCATC 1 cut(s) 286
Sfr274I CTCGAG 1 cut(s) 8
SinI GGWCC 2 cut(s) 841, 891
SlaI CTCGAG 1 cut(s) 8
SmiMI CAYNNNNRTG 2 cut(s) 506, 582
SmlI CTYRAG 2 cut(s) 8, 110
SmoI CTYRAG 2 cut(s) 8, 110
Sse9I AATT 4 cut(s) 119, 259, 596, 723
SsiI CCGC 7 cut(s) 28, 36, 169, 251, 389, 392, 779
SspMI CTAG 2 cut(s) 548, 728
SstI GAGCTC 1 cut(s) 111
StyD4I CCNGG 3 cut(s) 216, 580, 940
StyI CCWWGG 2 cut(s) 1064, 1077
TaaI ACNGT 4 cut(s) 49, 157, 755, 936
TaiI ACGT 4 cut(s) 144, 189, 701, 777
TaqI TCGA 3 cut(s) 9, 105, 435
TasI AATT 4 cut(s) 119, 259, 596, 723
TauI GCSGC 4 cut(s) 38, 254, 392, 781
TfiI GAWTC 3 cut(s) 498, 768, 910
Tru1I TTAA 3 cut(s) 599, 855, 1123
Tru9I TTAA 3 cut(s) 599, 855, 1123
TscAI CASTG 1 cut(s) 293
TseFI GTSAC 1 cut(s) 782
Tsp45I GTSAC 1 cut(s) 782
TspDTI ATGAA 4 cut(s) 104, 347, 705, 753
TspGWI ACGGA 3 cut(s) 56, 140, 1108
TspRI CASTG 1 cut(s) 293
Tth111I GACNNNGTC 1 cut(s) 936
VneI GTGCAC 1 cut(s) 239
VpaK11BI GGWCC 2 cut(s) 841, 891
XapI RAATTY 2 cut(s) 119, 259
XhoI CTCGAG 1 cut(s) 8
XspI CTAG 2 cut(s) 548, 728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.