Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002862

Physical Location & Seq

Genomic Coordinates Forward (+)

6612546 .. 6618592

Gene Structure 6047 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1094300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGCAAGCTCTGCTTATGCTAACTTACATGCAATTAATGGGTCTTTTCAAACCCATTTCATATCTCACAGCTTTAATCACCTGAAAACCTCTCTTTCCTTGACTGTTAAGCCTCTACTCAAAGAGCTGGAGAAATTTTCATTGATAAAGGTGGATGTGTCTAAAAACATGAAAAACGCTTCTGGGAAGTTGTTAGATGCACTCATGAACTCCATGTTCCAATTCGTGGACCAACCATTGCTTCCATCTCAGGAAAACTTTGCTCCAGTTGAAGAGATTGGAGACCTTGTTGAGGTCATCTGCACTGAAGGAGAAATTCCCGCTGACTTTTCTGAGGGTGTGTTCATAAGAAACGGAAACAATCCTTTATTTGGAGGTCTGAAATCCGCAGTTTCAATTTTTGGGCAATCAAACCAGACTTGGGTAGACGGAGAAGGAATGCTTCATGCAGTATACTTTAAAAAAGATCCAAATGGAAGTTGGATTGTCTCGTACAAGAACAGATATGTTGAGACAGAAACATTTAAGCTAGAGAAACAAATGAATAACAAGCCATGTTTCTTACCAGTCCTAGAAGGAGATGCTTCAGCAGTTTTAGCAGCGCAGCTTCTAAATGTGTTGAGATTTGGCACAGTCAATAAATACTTTAGCAACACCAATGTTTTTGAGCACTCAGGAAGGGTTTACTCGATTACAGAGGATCACCTGCCTCAAGAGGTGGACATCTCAACCTTAGAAACTCTTTCTGATTGGGATGTCAATGGTGCTTGGGATCGACCTTTCACTAGCCATCCAAAGAAAGCTCCAGGTTCCGGAGAGTTAGTCATGATGGGGACAGCTGCAAAGAAACCTTACTATGTTCTGGGGGTTATTTCTGCTGATGGAAAGAAATTGCACAAGGCTGATCTCAAATTCAAAAGAAGCGTCCTCAGCCATGATATAGGAGTCACGCAGAAATTAATGAAGTATGAAACGGAAGGGTATGCGAGGATTGGAGTGATGCCACGTTATGGTAATGCAGAGTCAGTCAAATGGTTTGTGGTACAAACCAATTGCACATTTCACTTTCTCAATTGCTTTGAGGAGGACAATGAGGTTGTTGTGGTGAGGGGATGTAGGGCTCTCACATCTCTCATACCAGGTCCTGATGAACGAGTTGGTAATTTTGGTAACAAGTTTGAGTGGTTCTCCAAGGGGTTCAATTTTGCACATCATGATGATTCTGCGGCAGATGATGATGCTGGAACCGGATATTTCTTTGCTCGTGTATATGAATGGAGACTGAACATGGTGTCTGGGGAAGTTGAGGAGGAGAAAAATTTAACTGGAACTGAATTTGCCATGGAATTTCCTTTTATCAACGAACGATACACTGGTTTAAAACACAAGTATGGTTATACTCAAGTCATTGATTCTGTGGCAAGCTCTAACTCTGGCTTGGGTAAATTTGGAGCTCTAGCAAAATTATATTTGGATGATCAATCACATTCCACACCATCTGGGGATCAGGAGGAAAGATGTAGCGATCAGCAGTGGATAAAGGTGGAATACCATAAGTTTGAGGAGAACAACTTTTGCAGTGGAAGCGTTTTTGTGCCTAGACATGGAGGCATAGAGGAAGATGATGGTTGGATTGTCACTTTCGTCCACAATGAAAACACTCATGTAACCCAAGTTCATGTAATTGATGCAATGAAGTTTCAGAGTGAACCGATTGTGAAAATCACATTGCCACAGAGGGTGCCATATGGTTTCCATGGGACTTTTGTGTCAATGCTTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RPE65

Protein Analysis

595

Amino Acids

66.7

Weight (kDa)

5.58

Isoelectric Point (pI)

22.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	87 - 319	1.5e-46	Retinal pigment epithelial membrane protein
RPE65	PF03055	320 - 591	3.4e-52	Retinal pigment epithelial membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002862)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g35571 FvH4_2g35680 FvH4_2g35681 FvH4_2g35682 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520 FvH4_5g00520
malus_domestica	MD15G1094300.v1.1
prunus_persica	Prupe.1G449200_v2.0.a1 Prupe.1G449300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0306121
rosa_laevigata	RLG00000010823 RLG00000016512
rosa_multiflora	Rmu_sc0000785.1_g000018 Rmu_sc0000785.1_g000021 Rmu_sc0003594.1_g000022
rosa_roxburghii	Rroxscaffold_7G00162040 Rroxscaffold_7G00177250
rosa_rugosa	Rorug06G0282200 Rorug06G0346800 Rorug06G0346800
rosa_samantha	Rh6AG459300 Rh6AG459400 Rh6BG441600 Rh6CG473800 Rh6DG460000
rosa_wichuraiana	Rw6G040040 Rw7G016580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	714
AasI	GACNNNNNNGTC	1 cut(s)	1768
Acc36I	ACCTGC	1 cut(s)	714
AccB1I	GGYRCC	1 cut(s)	1741
AccB7I	CCANNNNNTGG	2 cut(s)	226, 1010
AccI	GTMKAC	2 cut(s)	426, 453
AccIII	TCCGGA	1 cut(s)	812
AciI	CCGC	3 cut(s)	321, 387, 1226
AclWI	GGATC	4 cut(s)	461, 708, 780, 1512
AcsI	RAATTY	7 cut(s)	134, 315, 911, 1318, 1334, 1346, 1445
AcuI	CTGAAG	2 cut(s)	327, 570
AfaI	GTAC	2 cut(s)	494, 1044
AfiI	CCNNNNNNNGG	7 cut(s)	226, 292, 371, 421, 812, 1010, 1604
AgsI	TTSAA	5 cut(s)	50, 272, 396, 916, 1201
AjnI	CCWGG	2 cut(s)	805, 1138
AjuI	GAANNNNNNNTTGG	2 cut(s)	225, 257
AluBI	AGCT	9 cut(s)	9, 72, 127, 529, 607, 803, 839, 1425, 1454
AluI	AGCT	9 cut(s)	9, 72, 127, 529, 607, 803, 839, 1425, 1454
Alw21I	GWGCWC	2 cut(s)	672, 1456
Alw26I	GTCTC	4 cut(s)	276, 493, 506, 1273
AlwI	GGATC	4 cut(s)	461, 708, 780, 1512
AlwNI	CAGNNNCTG	1 cut(s)	1145
Aor13HI	TCCGGA	1 cut(s)	812
ApeKI	GCWGC	3 cut(s)	599, 604, 839
ApoI	RAATTY	7 cut(s)	134, 315, 911, 1318, 1334, 1346, 1445
ArsI	GACNNNNNNTTYG	2 cut(s)	909, 941
AseI	ATTAAT	2 cut(s)	36, 959
AspLEI	GCGC	1 cut(s)	604
AspS9I	GGNCC	2 cut(s)	229, 1142
AsuHPI	GGTGA	3 cut(s)	71, 695, 1117
AvaII	GGWCC	2 cut(s)	229, 1142
BaeI	ACNNNNGTAYC	2 cut(s)	1360, 1393
BanI	GGYRCC	1 cut(s)	1741
BanII	GRGCYC	2 cut(s)	1123, 1456
BauI	CACGAG	1 cut(s)	1263
Bbv12I	GWGCWC	2 cut(s)	672, 1456
BbvCI	CCTCAGC	1 cut(s)	929
BbvI	GCAGC	3 cut(s)	611, 616, 826
BccI	CCATC	6 cut(s)	253, 798, 823, 875, 1504, 1619
BciT130I	CCWGG	2 cut(s)	807, 1140
BclI	TGATCA	1 cut(s)	1477
BcoDI	GTCTC	4 cut(s)	276, 493, 506, 1273
BfaI	CTAG	5 cut(s)	530, 572, 786, 1457, 1599
BfuAI	ACCTGC	1 cut(s)	714
BisI	GCNGC	4 cut(s)	600, 605, 840, 1227
BlsI	GCNGC	4 cut(s)	601, 606, 841, 1228
Bme1390I	CCNGG	2 cut(s)	807, 1140
Bme18I	GGWCC	2 cut(s)	229, 1142
BmgT120I	GGNCC	2 cut(s)	229, 1142
BmiI	GGNNCC	3 cut(s)	811, 1246, 1743
BmrFI	CCNGG	2 cut(s)	807, 1140
BmsI	GCATC	5 cut(s)	187, 571, 990, 1228, 1678
BplI	GAGNNNNNCTC	2 cut(s)	1172, 1204
BpmI	CTGGAG	3 cut(s)	149, 249, 789
Bpu10I	CCTNAGC	1 cut(s)	929
BpuEI	CTTGAG	2 cut(s)	696, 1386
BsaI	GGTCTC	1 cut(s)	276
BsaJI	CCNNGG	3 cut(s)	1191, 1341, 1756
BsaWI	WCCGGW	2 cut(s)	812, 1247
BsaXI	ACNNNNNCTCC	4 cut(s)	273, 303, 807, 837
Bsc4I	CCNNNNNNNGG	7 cut(s)	226, 292, 371, 421, 812, 1010, 1604
Bse1I	ACTGG	4 cut(s)	266, 566, 1330, 1378
Bse3DI	GCAATG	3 cut(s)	236, 1698, 1727
BseAI	TCCGGA	1 cut(s)	812
BseBI	CCWGG	2 cut(s)	807, 1140
BseDI	CCNNGG	3 cut(s)	1191, 1341, 1756
BseGI	GGATG	5 cut(s)	160, 760, 790, 1118, 1480
BseLI	CCNNNNNNNGG	7 cut(s)	226, 292, 371, 421, 812, 1010, 1604
BseMI	GCAATG	3 cut(s)	236, 1698, 1727
BseMII	CTCAG	4 cut(s)	263, 324, 687, 943
BseNI	ACTGG	4 cut(s)	266, 566, 1330, 1378
BseRI	GAGGAG	4 cut(s)	1097, 1322, 1325, 1577
BseXI	GCAGC	3 cut(s)	611, 616, 826
BsgI	GTGCAG	1 cut(s)	286
BshNI	GGYRCC	1 cut(s)	1741
BsiHKAI	GWGCWC	2 cut(s)	672, 1456
BsiSI	CCGG	2 cut(s)	813, 1248
BslFI	GGGAC	2 cut(s)	847, 1774
BslI	CCNNNNNNNGG	7 cut(s)	226, 292, 371, 421, 812, 1010, 1604
BsmAI	GTCTC	4 cut(s)	276, 493, 506, 1273
BsmFI	GGGAC	2 cut(s)	847, 1774
BsmI	GAATGC	1 cut(s)	444
Bso31I	GGTCTC	1 cut(s)	276
Bsp1286I	GDGCHC	3 cut(s)	672, 1123, 1456
Bsp13I	TCCGGA	1 cut(s)	812
Bsp143I	GATC	7 cut(s)	466, 700, 772, 904, 1477, 1504, 1525
Bsp19I	CCATGG	2 cut(s)	1341, 1756
BspACI	CCGC	3 cut(s)	321, 387, 1226
BspCNI	CTCAG	4 cut(s)	262, 325, 686, 942
BspEI	TCCGGA	1 cut(s)	812
BspHI	TCATGA	3 cut(s)	204, 825, 1213
BspLI	GGNNCC	3 cut(s)	811, 1246, 1743
BspMI	ACCTGC	1 cut(s)	714
BspPI	GGATC	4 cut(s)	461, 708, 780, 1512
BspT107I	GGYRCC	1 cut(s)	1741
BspTNI	GGTCTC	1 cut(s)	276
BsrDI	GCAATG	3 cut(s)	236, 1698, 1727
BsrI	ACTGG	4 cut(s)	266, 566, 1330, 1378
BssECI	CCNNGG	3 cut(s)	1191, 1341, 1756
BssMI	GATC	7 cut(s)	466, 700, 772, 904, 1477, 1504, 1525
BssNAI	GTATAC	1 cut(s)	454
BssSI	CACGAG	1 cut(s)	1263
BssT1I	CCWWGG	3 cut(s)	1191, 1341, 1756
Bst1107I	GTATAC	1 cut(s)	454
Bst2BI	CACGAG	1 cut(s)	1263
Bst2UI	CCWGG	2 cut(s)	807, 1140
Bst4CI	ACNGT	2 cut(s)	106, 634
Bst6I	CTCTTC	1 cut(s)	267
BstAPI	GCANNNNNTGC	1 cut(s)	11
BstC8I	GCNNGC	2 cut(s)	7, 1423
BstDEI	CTNAG	5 cut(s)	249, 333, 673, 733, 929
BstDSI	CCRYGG	2 cut(s)	1341, 1756
BstENI	CCTNNNNNAGG	1 cut(s)	290
BstF5I	GGATG	5 cut(s)	160, 760, 790, 1118, 1480
BstHHI	GCGC	1 cut(s)	604
BstKTI	GATC	7 cut(s)	469, 703, 775, 907, 1480, 1507, 1528
BstMAI	GTCTC	4 cut(s)	276, 493, 506, 1273
BstMBI	GATC	7 cut(s)	466, 700, 772, 904, 1477, 1504, 1525
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 596, 930, 1584
BstNI	CCWGG	2 cut(s)	807, 1140
BstNSI	RCATGY	1 cut(s)	32
BstSCI	CCNGG	2 cut(s)	805, 1138
BstV1I	GCAGC	3 cut(s)	611, 616, 826
BstX2I	RGATCY	1 cut(s)	466
BstYI	RGATCY	1 cut(s)	466
BstZ17I	GTATAC	1 cut(s)	454
BtgI	CCRYGG	2 cut(s)	1341, 1756
BtsCI	GGATG	5 cut(s)	160, 760, 790, 1118, 1480
BtsI	GCAGTG	2 cut(s)	1538, 1585
BtsIMutI	CAGTG	4 cut(s)	303, 1371, 1538, 1585
BveI	ACCTGC	1 cut(s)	714
Cac8I	GCNNGC	2 cut(s)	7, 1423
CaiI	CAGNNNCTG	1 cut(s)	1145
CciI	TCATGA	3 cut(s)	204, 825, 1213
CfoI	GCGC	1 cut(s)	604
Cfr13I	GGNCC	2 cut(s)	229, 1142
CseI	GACGC	1 cut(s)	913
CsiI	ACCWGGT	1 cut(s)	1138
Csp6I	GTAC	2 cut(s)	493, 1043
CviQI	GTAC	2 cut(s)	493, 1043
DdeI	CTNAG	5 cut(s)	249, 333, 673, 733, 929
DpnI	GATC	7 cut(s)	468, 702, 774, 906, 1479, 1506, 1527
DpnII	GATC	7 cut(s)	466, 700, 772, 904, 1477, 1504, 1525
DraI	TTTAAA	2 cut(s)	460, 1380
DrdI	GACNNNNNNGTC	1 cut(s)	1768
DseDI	GACNNNNNNGTC	1 cut(s)	1768
Eam1104I	CTCTTC	1 cut(s)	267
EarI	CTCTTC	1 cut(s)	267
Ecl136II	GAGCTC	1 cut(s)	1454
Eco130I	CCWWGG	3 cut(s)	1191, 1341, 1756
Eco24I	GRGCYC	2 cut(s)	1123, 1456
Eco31I	GGTCTC	1 cut(s)	276
Eco47I	GGWCC	2 cut(s)	229, 1142
Eco53kI	GAGCTC	1 cut(s)	1454
Eco57I	CTGAAG	2 cut(s)	327, 570
EcoICRI	GAGCTC	1 cut(s)	1454
EcoNI	CCTNNNNNAGG	1 cut(s)	290
EcoO109I	RGGNCCY	1 cut(s)	1142
EcoRII	CCWGG	2 cut(s)	805, 1138
EcoT14I	CCWWGG	3 cut(s)	1191, 1341, 1756
EcoT38I	GRGCYC	2 cut(s)	1123, 1456
ErhI	CCWWGG	3 cut(s)	1191, 1341, 1756
FalI	AAGNNNNNCTT	3 cut(s)	30, 426, 458
FaqI	GGGAC	2 cut(s)	847, 1774
FauI	CCCGC	1 cut(s)	328
FauNDI	CATATG	1 cut(s)	1747
FbaI	TGATCA	1 cut(s)	1477
FblI	GTMKAC	2 cut(s)	426, 453
Fnu4HI	GCNGC	4 cut(s)	600, 605, 840, 1227
FokI	GGATG	5 cut(s)	167, 767, 777, 1125, 1487
FriOI	GRGCYC	2 cut(s)	1123, 1456
Fsp4HI	GCNGC	4 cut(s)	600, 605, 840, 1227
FspBI	CTAG	5 cut(s)	530, 572, 786, 1457, 1599
GlaI	GCGC	1 cut(s)	603
GluI	GCNGC	4 cut(s)	600, 605, 840, 1227
GsuI	CTGGAG	3 cut(s)	149, 249, 789
HapII	CCGG	2 cut(s)	813, 1248
HgaI	GACGC	1 cut(s)	913
HhaI	GCGC	1 cut(s)	604
Hin6I	GCGC	1 cut(s)	602
HinP1I	GCGC	1 cut(s)	602
HinfI	GANTC	4 cut(s)	945, 1022, 1220, 1412
HpaII	CCGG	2 cut(s)	813, 1248
HphI	GGTGA	3 cut(s)	71, 695, 1117
Hpy166II	GTNNAC	7 cut(s)	229, 427, 454, 685, 721, 1648, 1709
Hpy188I	TCNGA	4 cut(s)	334, 381, 748, 1704
Hpy188III	TCNNGA	9 cut(s)	205, 251, 675, 713, 813, 826, 1145, 1214, 1508
Hpy8I	GTNNAC	7 cut(s)	229, 427, 454, 685, 721, 1648, 1709
HpyAV	CCTTC	5 cut(s)	302, 428, 569, 672, 971
HpyCH4III	ACNGT	2 cut(s)	106, 634
HpyCH4IV	ACGT	1 cut(s)	1006
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 596, 930, 1584
HpyF3I	CTNAG	5 cut(s)	249, 333, 673, 733, 929
HpySE526I	ACGT	1 cut(s)	1006
HspAI	GCGC	1 cut(s)	602
Kpn2I	TCCGGA	1 cut(s)	812
Ksp22I	TGATCA	1 cut(s)	1477
Kzo9I	GATC	7 cut(s)	466, 700, 772, 904, 1477, 1504, 1525
LmnI	GCTCC	3 cut(s)	268, 808, 1451
Lsp1109I	GCAGC	3 cut(s)	611, 616, 826
LweI	GCATC	5 cut(s)	187, 571, 990, 1228, 1678
MabI	ACCWGGT	1 cut(s)	1138
MaeI	CTAG	5 cut(s)	530, 572, 786, 1457, 1599
MaeII	ACGT	1 cut(s)	1006
MaeIII	GTNAC	4 cut(s)	946, 1169, 1636, 1666
MalI	GATC	7 cut(s)	468, 702, 774, 906, 1479, 1506, 1527
MboI	GATC	7 cut(s)	466, 700, 772, 904, 1477, 1504, 1525
MboII	GAAGA	2 cut(s)	284, 1631
MfeI	CAATTG	2 cut(s)	1051, 1072
MflI	RGATCY	1 cut(s)	466
MhlI	GDGCHC	3 cut(s)	672, 1123, 1456
MlyI	GAGTC	2 cut(s)	954, 1031
MmeI	TCCRAC	2 cut(s)	461, 1610
MroI	TCCGGA	1 cut(s)	812
MseI	TTAA	9 cut(s)	36, 75, 108, 459, 525, 959, 1322, 1379, 1779
MslI	CAYNNNNRTG	2 cut(s)	1215, 1389
MspA1I	CMGCKG	2 cut(s)	323, 839
MspI	CCGG	2 cut(s)	813, 1248
MspR9I	CCNGG	2 cut(s)	807, 1140
MunI	CAATTG	2 cut(s)	1051, 1072
Mva1269I	GAATGC	1 cut(s)	444
MvaI	CCWGG	2 cut(s)	807, 1140
MwoI	GCNNNNNNNGC	4 cut(s)	11, 596, 930, 1584
NcoI	CCATGG	2 cut(s)	1341, 1756
NdeI	CATATG	1 cut(s)	1747
NdeII	GATC	7 cut(s)	466, 700, 772, 904, 1477, 1504, 1525
NlaIV	GGNNCC	3 cut(s)	811, 1246, 1743
NmuCI	GTSAC	2 cut(s)	946, 1636
NspI	RCATGY	1 cut(s)	32
PagI	TCATGA	3 cut(s)	204, 825, 1213
PaqCI	CACCTGC	1 cut(s)	714
PctI	GAATGC	1 cut(s)	444
PfeI	GAWTC	2 cut(s)	1220, 1412
PflMI	CCANNNNNTGG	2 cut(s)	226, 1010
PkrI	GCNGC	4 cut(s)	601, 606, 841, 1228
PleI	GAGTC	2 cut(s)	953, 1030
PpsI	GAGTC	2 cut(s)	953, 1030
PpuMI	RGGWCCY	1 cut(s)	1142
PshBI	ATTAAT	2 cut(s)	36, 959
Psp124BI	GAGCTC	1 cut(s)	1456
Psp5II	RGGWCCY	1 cut(s)	1142
Psp6I	CCWGG	2 cut(s)	805, 1138
PspGI	CCWGG	2 cut(s)	805, 1138
PspN4I	GGNNCC	3 cut(s)	811, 1246, 1743
PspPI	GGNCC	2 cut(s)	229, 1142
PspPPI	RGGWCCY	1 cut(s)	1142
PsrI	GAACNNNNNNTAC	2 cut(s)	1659, 1691
PstNI	CAGNNNCTG	1 cut(s)	1145
PsuI	RGATCY	1 cut(s)	466
PvuII	CAGCTG	1 cut(s)	839
RsaI	GTAC	2 cut(s)	494, 1044
RsaNI	GTAC	2 cut(s)	493, 1043
RseI	CAYNNNNRTG	2 cut(s)	1215, 1389
SacI	GAGCTC	1 cut(s)	1456
SaqAI	TTAA	9 cut(s)	36, 75, 108, 459, 525, 959, 1322, 1379, 1779
SatI	GCNGC	4 cut(s)	600, 605, 840, 1227
Sau3AI	GATC	7 cut(s)	466, 700, 772, 904, 1477, 1504, 1525
Sau96I	GGNCC	2 cut(s)	229, 1142
SchI	GAGTC	2 cut(s)	954, 1031
ScrFI	CCNGG	2 cut(s)	807, 1140
SduI	GDGCHC	3 cut(s)	672, 1123, 1456
SexAI	ACCWGGT	1 cut(s)	1138
SfaNI	GCATC	5 cut(s)	187, 571, 990, 1228, 1678
SinI	GGWCC	2 cut(s)	229, 1142
SmiMI	CAYNNNNRTG	2 cut(s)	1215, 1389
SmlI	CTYRAG	2 cut(s)	711, 1401
SmoI	CTYRAG	2 cut(s)	711, 1401
SsiI	CCGC	3 cut(s)	321, 387, 1226
SspMI	CTAG	5 cut(s)	530, 572, 786, 1457, 1599
SstI	GAGCTC	1 cut(s)	1456
StyD4I	CCNGG	2 cut(s)	805, 1138
StyI	CCWWGG	3 cut(s)	1191, 1341, 1756
TaaI	ACNGT	2 cut(s)	106, 634
TaiI	ACGT	1 cut(s)	1009
TaqI	TCGA	2 cut(s)	689, 775
TauI	GCSGC	1 cut(s)	1229
TfiI	GAWTC	2 cut(s)	1220, 1412
Tru1I	TTAA	9 cut(s)	36, 75, 108, 459, 525, 959, 1322, 1379, 1779
Tru9I	TTAA	9 cut(s)	36, 75, 108, 459, 525, 959, 1322, 1379, 1779
TscAI	CASTG	4 cut(s)	310, 1378, 1538, 1585
TseFI	GTSAC	2 cut(s)	946, 1636
TseI	GCWGC	3 cut(s)	599, 604, 839
Tsp45I	GTSAC	2 cut(s)	946, 1636
TspGWI	ACGGA	3 cut(s)	369, 444, 989
TspRI	CASTG	4 cut(s)	310, 1378, 1538, 1585
Van91I	CCANNNNNTGG	2 cut(s)	226, 1010
VpaK11BI	GGWCC	2 cut(s)	229, 1142
VspI	ATTAAT	2 cut(s)	36, 959
XagI	CCTNNNNNAGG	1 cut(s)	290
XapI	RAATTY	7 cut(s)	134, 315, 911, 1318, 1334, 1346, 1445
XceI	RCATGY	1 cut(s)	32
XcmI	CCANNNNNNNNNTGG	1 cut(s)	477
XmiI	GTMKAC	2 cut(s)	426, 453
XspI	CTAG	5 cut(s)	530, 572, 786, 1457, 1599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.