Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003082

Physical Location & Seq

Genomic Coordinates Reverse (-)

1317761 .. 1323834

Gene Structure 6074 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1018100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGCCAGATTGGAGAGCTTGATCGGGCTGGTCAATCGCATCCAGCGAGCCTGCACCGTTCTAGGAGATCATGGTGGCGGCGACGGCATGTCGCTCTGGGAAGCTCTTCCGACGGTCGCCGTCGTCGGAGGCCAGAGTTCCGGAAAGTCGTCGGTTTTGGAAAGCGTCGTTGGGAGAGATTTCTTGCCTCGTGGATCTGGTATTGTGACGAGGAGACCATTGGTGTTGCAACTCCATCAGATAGAAGCGAATCGGTCTGAATATGCAGAGTTTCTTCATTGTCCTAAGAAGAAGTTTACTGATTTTGCTTCTGTACGTAAGGAAATCTCAGATGAGACTGATCGTATAACTGGGAAGTCCAAACAAATCTCAAACATTCCAATTCATCTCAGCATATATTCTCCAAATGTTGTAAACTTAACCCTTATTGATCTTCCTGGATTGACAAAGGTGGCTGTAGAGGGACAACCAGAATCCATTGTAGAAGATATTGAGAATATGGTCCGTTCTTATGTTGAGAAGCCTAACTGCATTATATTGGCTATCTCTCCTGCTAATCAAGATATTGCCACTTCAGATGCCATCAAACTTGCAAGAGAAGTCGACCCGTCTGGTGAAAGAACATTTGGAGTGCTAACAAAACTCGATCTGATGGACAAGGGAACCAATGCTCTGGATGTTATAGAAGGAAGGTCATATAGACTGCAACACCCATGGGTAGGAATTGTGAATCGTTCACAAGCTGATATCAACAAGAACGTTGATATGATTGCTGCTCGTCGTAAGGAGCAAGAATACTTTGAAACTAGCCCTGAATATGGGCATTTGGCGCACAAAATGGGTTCAGAGTATCTTGCCAAACTTTTGTCTAAGCATCTGGAGGTTGTCATTAGGCAACGCATACCTAGTATCATTGCCTTGATAAACAAGACAATTGATGAGCTTAATGCAGAGCTGGATCGTATTGGCAGGCCAATTGGTGTAGATTCGGGGGCCCAGCTGTATACTATTTTAGAATTATGTCGGGCATTTGACCGTGTATTTAAGGAACACCTGGATGGAGGGCGACCTGGTGGAGATCGGATATATAAGGTTTTTGACCATCAATTACCTGCTGCTTTGAAAAAGCTTCCATTTGATCGTCATCTCTCTGTAAAGAATGTTCAAAAAGTTGTCAGTGAGGCTGATGGTTACCAGCCCCATTTGATTGCTCCAGAACAAGGATACCGAAGACTCATTGACGGATCTATCGTCTATTTCAAAGGACCAGCTGAAGCCTCTGTGGATGCTGTGCACTTTGTTTTGAAAGAACTTGTACGGAAGTCAATAGCTGAAACAGAGGAATTAAAACGATTCCCTACACTTCAATCTGATATAGCAGCCGCTTCCACAGAAGCGTTGGAAAGGTTTCGTGACGAAAGCAGGAAAACTGTTACACGACTGGTGGAAATGGAATCTAGCTATCTAACGGTGGAATTTTTCAGAAAGCTTAATTCTGAACCGGAAAGAACTCCAAATCAAGCAGGATCGAAGGCGGATAAACACTCAAAAGAAACAGTACAGAATATGGACACTTTCGGAGATAATTATCTCAGGAGGATTGCATCAAATGTCAGCTCTTACATCAATATGGTTTGTGAGACGCTGAGGCTTTCGATTCCAAAGGCTGTTGTTCACTGTCAAGTTCGAGAGGCCAAGAGAAATCTGCTCAACCTTTTCTACACCAAAATTGGAAGGCAAGAGAAGGAGAGACTTGGCGCAATGTTGGATGAGGATCCGGCACTCATGGAAAGGCGAACAAACATTGCTAAACGCCTTGAACTCTACAAGTCAGCTAGAGATGAGATCGATTCTGTCGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0005938 GO:0006996 GO:0007005 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009506 GO:0009555 GO:0009987 GO:0010152 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0021700 GO:0030054 GO:0032501 GO:0032502 GO:0044424 GO:0044444 GO:0044464 GO:0048229 GO:0048285 GO:0048856 GO:0055044 GO:0071840 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

623

Amino Acids

69.87

Weight (kDa)

8.04

Isoelectric Point (pI)

43.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	39 - 215	2.1e-56	Dynamin family
Dynamin_M	PF01031	223 - 491	3.8e-63	Dynamin central region
GED	PF02212	530 - 619	2.2e-22	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003082)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14830
fragaria_vesca	FvH4_4g33500 FvH4_4g33500 FvH4_4g33500 FvH4_4g33500 FvH4_4g33500
malus_domestica	MD13G1020000.v1.1 MD16G1018100.v1.1
prunus_persica	Prupe.1G333900_v2.0.a1 Prupe.1G333900_v2.0.a1
pyrus_communis	pycom13g01690 pycom16g01640
rosa_chinensis	RchiOBHm_Chr3g0480151 RchiOBHm_Chr3g0480161 RchiOBHm_Chr4g0390411 RchiOBHm_Chr4g0416491 RchiOBHm_Chr4g0442811 RchiOBHm_Chr4g0442891
rosa_laevigata	RLG00000005982 RLG00000012829
rosa_multiflora	Rmu_sc0020879.1_g000001 Rmu_sc0035241.1_g000001 Rmu_ssc0000204.1_g000018
rosa_roxburghii	Rroxscaffold_5G00383590 Rroxscaffold_7G00158920
rosa_rugosa	Rorug04G0343300
rosa_samantha	Rh2BG213500 Rh3AG232300 Rh3CG262100 Rh3DG257800 Rh4AG395900 Rh4BG408800 Rh4CG424400 Rh4DG402900 Rh5BG186100
rosa_wichuraiana	Rw3G020860 Rw4G034220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1120
AccI	GTMKAC	2 cut(s)	603, 1004
AccIII	TCCGGA	1 cut(s)	140
AciI	CCGC	3 cut(s)	78, 1383, 1535
AclI	AACGTT	1 cut(s)	759
AclWI	GGATC	6 cut(s)	202, 966, 1252, 1534, 1769, 1782
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	1475
AcuI	CTGAAG	2 cut(s)	558, 1293
AfaI	GTAC	3 cut(s)	315, 1317, 1560
AfiI	CCNNNNNNNGG	3 cut(s)	719, 818, 1220
AgsI	TTSAA	7 cut(s)	803, 1123, 1166, 1261, 1306, 1367, 1820
AhdI	GACNNNNNGTC	1 cut(s)	88
AjnI	CCWGG	3 cut(s)	436, 1053, 1069
AjuI	GAANNNNNNNTTGG	4 cut(s)	153, 185, 609, 641
Alw21I	GWGCWC	1 cut(s)	1296
Alw26I	GTCTC	4 cut(s)	208, 329, 1634, 1744
Alw44I	GTGCAC	1 cut(s)	1292
AlwI	GGATC	6 cut(s)	202, 966, 1252, 1534, 1769, 1782
Aor13HI	TCCGGA	1 cut(s)	140
AoxI	GGCC	5 cut(s)	3, 130, 971, 993, 1692
ApaI	GGGCCC	1 cut(s)	997
ApaLI	GTGCAC	1 cut(s)	1292
ApeKI	GCWGC	3 cut(s)	773, 1115, 1379
ApoI	RAATTY	1 cut(s)	1475
Asp700I	GAANNNNTTC	2 cut(s)	105, 1407
AspLEI	GCGC	2 cut(s)	832, 1760
AspS9I	GGNCC	4 cut(s)	502, 993, 994, 1265
AsuHPI	GGTGA	1 cut(s)	626
AvaII	GGWCC	2 cut(s)	502, 1265
BaeGI	GKGCMC	2 cut(s)	997, 1296
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	1774
BanII	GRGCYC	1 cut(s)	997
BauI	CACGAG	1 cut(s)	189
BbsI	GAAGAC	1 cut(s)	1237
Bbv12I	GWGCWC	1 cut(s)	1296
BbvCI	CCTCAGC	1 cut(s)	1646
BbvI	GCAGC	3 cut(s)	760, 1102, 1391
BccI	CCATC	6 cut(s)	243, 590, 646, 1052, 1110, 1181
BceAI	ACGGC	2 cut(s)	100, 104
BciT130I	CCWGG	3 cut(s)	438, 1055, 1071
BciVI	GTATCC	1 cut(s)	1217
BcoDI	GTCTC	4 cut(s)	208, 329, 1634, 1744
BfaI	CTAG	5 cut(s)	62, 807, 906, 1458, 1836
BfmI	CTRYAG	1 cut(s)	456
BfuAI	ACCTGC	1 cut(s)	1120
BfuI	GTATCC	1 cut(s)	1217
BisI	GCNGC	5 cut(s)	79, 774, 1116, 1380, 1383
BlsI	GCNGC	5 cut(s)	80, 775, 1117, 1381, 1384
Bme1390I	CCNGG	3 cut(s)	438, 1055, 1071
Bme18I	GGWCC	2 cut(s)	502, 1265
BmeRI	GACNNNNNGTC	1 cut(s)	88
BmgT120I	GGNCC	4 cut(s)	502, 993, 994, 1265
BmiI	GGNNCC	4 cut(s)	664, 994, 995, 1776
BmrFI	CCNGG	3 cut(s)	438, 1055, 1071
BmrI	ACTGGG	1 cut(s)	360
BmsI	GCATC	5 cut(s)	48, 568, 883, 1276, 1613
BmuI	ACTGGG	1 cut(s)	360
BpiI	GAAGAC	1 cut(s)	1237
BpmI	CTGGAG	2 cut(s)	899, 1197
Bpu10I	CCTNAGC	1 cut(s)	1646
Bsa29I	ATCGAT	1 cut(s)	1848
BsaAI	YACGTR	1 cut(s)	317
BsaBI	GATNNNNATC	3 cut(s)	1143, 1587, 1773
BsaI	GGTCTC	1 cut(s)	208
BsaJI	CCNNGG	1 cut(s)	713
BsaWI	WCCGGW	2 cut(s)	140, 1501
Bsc4I	CCNNNNNNNGG	3 cut(s)	719, 818, 1220
Bse1I	ACTGG	2 cut(s)	355, 1446
Bse3DI	GCAATG	3 cut(s)	912, 1767, 1803
Bse8I	GATNNNNATC	3 cut(s)	1143, 1587, 1773
BseAI	TCCGGA	1 cut(s)	140
BseBI	CCWGG	3 cut(s)	438, 1055, 1071
BseCI	ATCGAT	1 cut(s)	1848
BseDI	CCNNGG	1 cut(s)	713
BseGI	GGATG	5 cut(s)	39, 682, 1063, 1291, 1774
BseJI	GATNNNNATC	3 cut(s)	1143, 1587, 1773
BseLI	CCNNNNNNNGG	3 cut(s)	719, 818, 1220
BseMI	GCAATG	3 cut(s)	912, 1767, 1803
BseMII	CTCAG	4 cut(s)	342, 403, 1606, 1637
BseNI	ACTGG	2 cut(s)	355, 1446
BseRI	GAGGAG	1 cut(s)	226
BseSI	GKGCMC	2 cut(s)	997, 1296
BseXI	GCAGC	3 cut(s)	760, 1102, 1391
BseYI	CCCAGC	1 cut(s)	996
BsgI	GTGCAG	1 cut(s)	37
Bsh1285I	CGRYCG	1 cut(s)	117
BshFI	GGCC	5 cut(s)	5, 132, 973, 995, 1694
BshVI	ATCGAT	1 cut(s)	1848
BsiEI	CGRYCG	1 cut(s)	117
BsiHKAI	GWGCWC	1 cut(s)	1296
BsiSI	CCGG	3 cut(s)	141, 1502, 1778
BslFI	GGGAC	1 cut(s)	477
BslI	CCNNNNNNNGG	3 cut(s)	719, 818, 1220
BsmAI	GTCTC	4 cut(s)	208, 329, 1634, 1744
BsmBI	CGTCTC	1 cut(s)	1634
BsmFI	GGGAC	1 cut(s)	477
BsnI	GGCC	5 cut(s)	5, 132, 973, 995, 1694
Bso31I	GGTCTC	1 cut(s)	208
Bsp120I	GGGCCC	1 cut(s)	993
Bsp1286I	GDGCHC	2 cut(s)	997, 1296
Bsp13I	TCCGGA	1 cut(s)	140
Bsp19I	CCATGG	1 cut(s)	713
BspACI	CCGC	3 cut(s)	78, 1383, 1535
BspANI	GGCC	5 cut(s)	5, 132, 973, 995, 1694
BspCNI	CTCAG	4 cut(s)	341, 402, 1605, 1638
BspDI	ATCGAT	1 cut(s)	1848
BspEI	TCCGGA	1 cut(s)	140
BspLI	GGNNCC	4 cut(s)	664, 994, 995, 1776
BspMI	ACCTGC	1 cut(s)	1120
BspPI	GGATC	6 cut(s)	202, 966, 1252, 1534, 1769, 1782
BspQI	GCTCTTC	1 cut(s)	111
BspTNI	GGTCTC	1 cut(s)	208
BsrDI	GCAATG	3 cut(s)	912, 1767, 1803
BsrI	ACTGG	2 cut(s)	355, 1446
BssECI	CCNNGG	1 cut(s)	713
BssNAI	GTATAC	1 cut(s)	1005
BssSI	CACGAG	1 cut(s)	189
BssT1I	CCWWGG	1 cut(s)	713
Bst1107I	GTATAC	1 cut(s)	1005
Bst2BI	CACGAG	1 cut(s)	189
Bst2UI	CCWGG	3 cut(s)	438, 1055, 1071
Bst4CI	ACNGT	7 cut(s)	58, 115, 1037, 1432, 1471, 1558, 1679
Bst6I	CTCTTC	1 cut(s)	111
BstBAI	YACGTR	1 cut(s)	317
BstC8I	GCNNGC	3 cut(s)	48, 52, 971
BstDEI	CTNAG	6 cut(s)	285, 328, 389, 870, 1592, 1646
BstDSI	CCRYGG	1 cut(s)	713
BstEII	GGTNACC	1 cut(s)	1190
BstF5I	GGATG	5 cut(s)	39, 682, 1063, 1291, 1774
BstHHI	GCGC	2 cut(s)	832, 1760
BstMAI	GTCTC	4 cut(s)	208, 329, 1634, 1744
BstMCI	CGRYCG	1 cut(s)	117
BstMWI	GCNNNNNNNGC	2 cut(s)	84, 829
BstNI	CCWGG	3 cut(s)	438, 1055, 1071
BstNSI	RCATGY	1 cut(s)	91
BstPI	GGTNACC	1 cut(s)	1190
BstSCI	CCNGG	3 cut(s)	436, 1053, 1069
BstSFI	CTRYAG	1 cut(s)	456
BstSLI	GKGCMC	2 cut(s)	997, 1296
BstSNI	TACGTA	1 cut(s)	317
BstV1I	GCAGC	3 cut(s)	760, 1102, 1391
BstV2I	GAAGAC	1 cut(s)	1237
BstX2I	RGATCY	3 cut(s)	194, 1244, 1774
BstXI	CCANNNNNNTGG	1 cut(s)	673
BstYI	RGATCY	3 cut(s)	194, 1244, 1774
BstZ17I	GTATAC	1 cut(s)	1005
Bsu15I	ATCGAT	1 cut(s)	1848
BsuI	GTATCC	1 cut(s)	1217
BsuRI	GGCC	5 cut(s)	5, 132, 973, 995, 1694
BsuTUI	ATCGAT	1 cut(s)	1848
BtgI	CCRYGG	1 cut(s)	713
BtsCI	GGATG	5 cut(s)	39, 682, 1063, 1291, 1774
BtsIMutI	CAGTG	2 cut(s)	1183, 1675
BveI	ACCTGC	1 cut(s)	1120
Cac8I	GCNNGC	3 cut(s)	48, 52, 971
CfoI	GCGC	2 cut(s)	832, 1760
Cfr13I	GGNCC	4 cut(s)	502, 993, 994, 1265
ClaI	ATCGAT	1 cut(s)	1848
CseI	GACGC	2 cut(s)	154, 1651
CsiI	ACCWGGT	1 cut(s)	1069
Csp6I	GTAC	3 cut(s)	314, 1316, 1559
CviAII	CATG	5 cut(s)	71, 88, 714, 1786, 1860
CviQI	GTAC	3 cut(s)	314, 1316, 1559
DdeI	CTNAG	6 cut(s)	285, 328, 389, 870, 1592, 1646
DriI	GACNNNNNGTC	1 cut(s)	88
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	111
Eam1105I	GACNNNNNGTC	1 cut(s)	88
EarI	CTCTTC	1 cut(s)	111
EciI	GGCGGA	1 cut(s)	1550
Eco105I	TACGTA	1 cut(s)	317
Eco130I	CCWWGG	1 cut(s)	713
Eco24I	GRGCYC	1 cut(s)	997
Eco31I	GGTCTC	1 cut(s)	208
Eco32I	GATATC	1 cut(s)	748
Eco47I	GGWCC	2 cut(s)	502, 1265
Eco57I	CTGAAG	2 cut(s)	558, 1293
Eco91I	GGTNACC	1 cut(s)	1190
EcoO109I	RGGNCCY	1 cut(s)	993
EcoO65I	GGTNACC	1 cut(s)	1190
EcoRII	CCWGG	3 cut(s)	436, 1053, 1069
EcoRV	GATATC	1 cut(s)	748
EcoT14I	CCWWGG	1 cut(s)	713
EcoT38I	GRGCYC	1 cut(s)	997
ErhI	CCWWGG	1 cut(s)	713
Esp3I	CGTCTC	1 cut(s)	1634
FaeI	CATG	5 cut(s)	74, 91, 717, 1789, 1863
FaqI	GGGAC	1 cut(s)	477
FatI	CATG	5 cut(s)	70, 87, 713, 1785, 1859
FblI	GTMKAC	2 cut(s)	603, 1004
Fnu4HI	GCNGC	5 cut(s)	79, 774, 1116, 1380, 1383
FokI	GGATG	5 cut(s)	26, 689, 1070, 1298, 1781
FriOI	GRGCYC	1 cut(s)	997
Fsp4HI	GCNGC	5 cut(s)	79, 774, 1116, 1380, 1383
FspBI	CTAG	5 cut(s)	62, 807, 906, 1458, 1836
GlaI	GCGC	2 cut(s)	831, 1759
GluI	GCNGC	5 cut(s)	79, 774, 1116, 1380, 1383
GsaI	CCCAGC	1 cut(s)	1000
GsuI	CTGGAG	2 cut(s)	899, 1197
HaeIII	GGCC	5 cut(s)	5, 132, 973, 995, 1694
HapII	CCGG	3 cut(s)	141, 1502, 1778
HgaI	GACGC	2 cut(s)	154, 1651
HhaI	GCGC	2 cut(s)	832, 1760
Hin1II	CATG	5 cut(s)	74, 91, 717, 1789, 1863
Hin6I	GCGC	2 cut(s)	830, 1758
HinP1I	GCGC	2 cut(s)	830, 1758
HincII	GTYRAC	1 cut(s)	604
HindII	GTYRAC	1 cut(s)	604
HindIII	AAGCTT	2 cut(s)	1127, 1487
HinfI	GANTC	9 cut(s)	250, 473, 730, 986, 1233, 1353, 1454, 1657, 1850
HpaII	CCGG	3 cut(s)	141, 1502, 1778
HphI	GGTGA	1 cut(s)	626
Hpy166II	GTNNAC	7 cut(s)	297, 415, 604, 737, 1005, 1294, 1675
Hpy188III	TCNNGA	8 cut(s)	141, 560, 674, 878, 1214, 1412, 1594, 1688
Hpy8I	GTNNAC	7 cut(s)	297, 415, 604, 737, 1005, 1294, 1675
Hpy99I	CGWCG	7 cut(s)	86, 115, 125, 128, 154, 170, 783
HpyAV	CCTTC	5 cut(s)	680, 684, 1525, 1728, 1738
HpyCH4III	ACNGT	7 cut(s)	58, 115, 1037, 1432, 1471, 1558, 1679
HpyCH4IV	ACGT	2 cut(s)	316, 759
HpyCH4V	TGCA	9 cut(s)	54, 229, 266, 531, 593, 706, 950, 1294, 1604
HpyF10VI	GCNNNNNNNGC	2 cut(s)	84, 829
HpyF3I	CTNAG	6 cut(s)	285, 328, 389, 870, 1592, 1646
HpySE526I	ACGT	2 cut(s)	316, 759
Hsp92II	CATG	5 cut(s)	74, 91, 717, 1789, 1863
HspAI	GCGC	2 cut(s)	830, 1758
Kpn2I	TCCGGA	1 cut(s)	140
LguI	GCTCTTC	1 cut(s)	111
LmnI	GCTCC	2 cut(s)	787, 1216
Lsp1109I	GCAGC	3 cut(s)	760, 1102, 1391
LweI	GCATC	5 cut(s)	48, 568, 883, 1276, 1613
MabI	ACCWGGT	1 cut(s)	1069
MaeI	CTAG	5 cut(s)	62, 807, 906, 1458, 1836
MaeII	ACGT	2 cut(s)	316, 759
MaeIII	GTNAC	4 cut(s)	205, 1190, 1412, 1432
MboII	GAAGA	6 cut(s)	98, 266, 301, 425, 497, 1242
MfeI	CAATTG	2 cut(s)	933, 975
MflI	RGATCY	3 cut(s)	194, 1244, 1774
MhlI	GDGCHC	2 cut(s)	997, 1296
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	1227
MmeI	TCCRAC	4 cut(s)	106, 134, 1380, 1746
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	140
MroXI	GAANNNNTTC	2 cut(s)	105, 1407
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	419, 945, 1044, 1346, 1491
MslI	CAYNNNNRTG	3 cut(s)	1056, 1628, 1864
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	1000, 1271
MspI	CCGG	3 cut(s)	141, 1502, 1778
MspR9I	CCNGG	3 cut(s)	438, 1055, 1071
MunI	CAATTG	2 cut(s)	933, 975
MvaI	CCWGG	3 cut(s)	438, 1055, 1071
MwoI	GCNNNNNNNGC	2 cut(s)	84, 829
NcoI	CCATGG	1 cut(s)	713
NlaIII	CATG	5 cut(s)	74, 91, 717, 1789, 1863
NlaIV	GGNNCC	4 cut(s)	664, 994, 995, 1776
NmuCI	GTSAC	2 cut(s)	205, 1412
NspI	RCATGY	1 cut(s)	91
PciSI	GCTCTTC	1 cut(s)	111
PcsI	WCGNNNNNNNCGW	2 cut(s)	43, 1248
PdmI	GAANNNNTTC	2 cut(s)	105, 1407
PfeI	GAWTC	8 cut(s)	250, 473, 730, 986, 1353, 1454, 1657, 1850
PfoI	TCCNGGA	1 cut(s)	436
PkrI	GCNGC	5 cut(s)	80, 775, 1117, 1381, 1384
PleI	GAGTC	1 cut(s)	1227
PpsI	GAGTC	1 cut(s)	1227
Ppu21I	YACGTR	1 cut(s)	317
Psp1406I	AACGTT	1 cut(s)	759
Psp6I	CCWGG	3 cut(s)	436, 1053, 1069
PspEI	GGTNACC	1 cut(s)	1190
PspFI	CCCAGC	1 cut(s)	996
PspGI	CCWGG	3 cut(s)	436, 1053, 1069
PspN4I	GGNNCC	4 cut(s)	664, 994, 995, 1776
PspOMI	GGGCCC	1 cut(s)	993
PspPI	GGNCC	4 cut(s)	502, 993, 994, 1265
PsrI	GAACNNNNNNTAC	2 cut(s)	1146, 1178
PsuI	RGATCY	3 cut(s)	194, 1244, 1774
PvuII	CAGCTG	2 cut(s)	1000, 1271
RsaI	GTAC	3 cut(s)	315, 1317, 1560
RsaNI	GTAC	3 cut(s)	314, 1316, 1559
RseI	CAYNNNNRTG	3 cut(s)	1056, 1628, 1864
SalI	GTCGAC	1 cut(s)	602
SapI	GCTCTTC	1 cut(s)	111
SaqAI	TTAA	5 cut(s)	419, 945, 1044, 1346, 1491
SatI	GCNGC	5 cut(s)	79, 774, 1116, 1380, 1383
Sau96I	GGNCC	4 cut(s)	502, 993, 994, 1265
SchI	GAGTC	1 cut(s)	1227
ScrFI	CCNGG	3 cut(s)	438, 1055, 1071
SduI	GDGCHC	2 cut(s)	997, 1296
SexAI	ACCWGGT	1 cut(s)	1069
SfaNI	GCATC	5 cut(s)	48, 568, 883, 1276, 1613
SfcI	CTRYAG	1 cut(s)	456
SinI	GGWCC	2 cut(s)	502, 1265
SmiMI	CAYNNNNRTG	3 cut(s)	1056, 1628, 1864
SnaBI	TACGTA	1 cut(s)	317
SsiI	CCGC	3 cut(s)	78, 1383, 1535
SspMI	CTAG	5 cut(s)	62, 807, 906, 1458, 1836
StyD4I	CCNGG	3 cut(s)	436, 1053, 1069
StyI	CCWWGG	1 cut(s)	713
TaaI	ACNGT	7 cut(s)	58, 115, 1037, 1432, 1471, 1558, 1679
TaiI	ACGT	2 cut(s)	319, 762
TaqI	TCGA	6 cut(s)	603, 645, 1529, 1655, 1687, 1848
TaqII	GACCGA	1 cut(s)	243
TatI	WGTACW	1 cut(s)	1558
TauI	GCSGC	2 cut(s)	81, 1385
TfiI	GAWTC	8 cut(s)	250, 473, 730, 986, 1353, 1454, 1657, 1850
Tru1I	TTAA	5 cut(s)	419, 945, 1044, 1346, 1491
Tru9I	TTAA	5 cut(s)	419, 945, 1044, 1346, 1491
TscAI	CASTG	2 cut(s)	1183, 1682
TseFI	GTSAC	2 cut(s)	205, 1412
TseI	GCWGC	3 cut(s)	773, 1115, 1379
Tsp45I	GTSAC	2 cut(s)	205, 1412
TspDTI	ATGAA	2 cut(s)	266, 374
TspGWI	ACGGA	3 cut(s)	494, 1257, 1333
TspRI	CASTG	2 cut(s)	1183, 1682
VneI	GTGCAC	1 cut(s)	1292
VpaK11BI	GGWCC	2 cut(s)	502, 1265
XapI	RAATTY	1 cut(s)	1475
XceI	RCATGY	1 cut(s)	91
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1396
XmiI	GTMKAC	2 cut(s)	603, 1004
XmnI	GAANNNNTTC	2 cut(s)	105, 1407
XspI	CTAG	5 cut(s)	62, 807, 906, 1458, 1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.