MD16G1045200.v1.1

Aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
3176155 .. 3178155
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1045200.v1.1.491

Sequence Viewer

Length: 1227 bp
ATGGCGGCCAAAATCGGGTCCTTCCGCCACAGCTTCGCCGAGAGAAGCAAGGAACGGCTGCTGTCGCGAAAAGGGTACTCCGACTTGGGCTTCAACAGCTCCGAGGCCGGCGACGAGAACGTCAAATGCGGCTGCTTCCGAAGAATCTCCGATGGGTTCAACAACTTCTGCAACAATTTCCAGGGCACTTTCATCAAGTTATATCAAATGGGTCATTCGGATCCTCGAAAAGCCATCTTTGCTATCAAGATGGGGTTGACGTTGGCGCTCGTGTCGCTGCTAATATTTTTCAAAGTGCCGCTCAAAGATGTCAGCCAGTATTCTATCTGGGCAATTCTCACTGTCGTCGTCGTCTTTGAATTCAGCGTAGGTGCAACCTTGAACAAGGGTTTTAATCGTGCTTTGGGGACGTTATCAGCGGGCGGGCTTTCTCTTGGGATTGCAGAGTTATCCGTATTGGCCGGAGATCTGCAGGAAGTTATAATTGTAATTAGTGTGTTTATAGCAGGATTTTGTGCTAGTTACGCCAAGCTTTATCCGTCAATGAAGCCATATGAATACGGATTTCGGGTATTCTTGTTGACATATTGTATCGTCATGGTGTCTGGAACATCATTATTCTTTCAGACAGCAATTTATCGATTGCTGCTTATTGCTGTCGGTGCCGCCACTAGTTTGATTGTAAATATATTTATATACCCTATCTGGTCAGGGGAAGATCTCCATAAGCTGGTGGTGAAAAATTTCAGGGGTGTTGCTGCTTCTTTGGAAGGTGTTGTTAATCAGTATCTGCAATGTGTTGAATACGAGAGAATTCCTTCCAAAATTCTCACTTACCAAGCTTCTGATGACCCGTTGTATAGTGGCTATAGATCAGCTGTACAATCTTCAAGCGAAGAGGAAACTCTGTTAGGCTTTGCTGTATGGGAGCCACCCCATGGCCCATATAAGTCATTCAATTATCCCTGGGTACACTATGTCAAAGTTGCCGGTTCACTGAGGCATTGTGCATTCATGGTCATGGCGATGCACGGATGCATACTTTCAGAAATCCAGGTAAATATTTATTTTTCCTCCTCTGTGATTTTGCAGAATGTACATAGCAGAAGAAAAAGGAAGGGGTGTACTATCCACAGTGACACACCCCTTTTTACTTTTCTCACACCCCTTGTTAATTTCTGTCATTTGATCTTCTTCAATTCATCCGATCCAACGGCCGAAAATTAG

Protein Analysis

409

Amino Acids

45.46

Weight (kDa)

8.79

Isoelectric Point (pI)

32.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 69 - 355 1.1e-136 Aluminium activated malate transporter
FUSC_2 PF13515 106 - 228 1.6e-11 Fusaric acid resistance protein-like
FUSC PF04632 110 - 262 5e-11 Fusaric acid resistance protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 482
AasI GACNNNNNNGTC 1 cut(s) 119
AccB1I GGYRCC 1 cut(s) 662
AccB7I CCANNNNNTGG 2 cut(s) 730, 938
AccBSI CCGCTC 1 cut(s) 301
AccII CGCG 1 cut(s) 67
AciI CCGC 7 cut(s) 5, 25, 129, 299, 419, 423, 666
AclWI GGATC 3 cut(s) 215, 228, 1202
AcoI YGGCCR 3 cut(s) 6, 459, 1215
AcsI RAATTY 4 cut(s) 359, 742, 813, 825
AfaI GTAC 5 cut(s) 77, 882, 972, 1098, 1126
AfiI CCNNNNNNNGG 3 cut(s) 15, 730, 938
AgsI TTSAA 9 cut(s) 94, 160, 292, 359, 382, 803, 891, 958, 1198
AhlI ACTAGT 1 cut(s) 671
AjnI CCWGG 3 cut(s) 180, 965, 1053
AluBI AGCT 6 cut(s) 33, 99, 532, 730, 842, 878
AluI AGCT 6 cut(s) 33, 99, 532, 730, 842, 878
AlwI GGATC 3 cut(s) 215, 228, 1202
AlwNI CAGNNNCTG 1 cut(s) 790
AoxI GGCC 5 cut(s) 6, 105, 459, 940, 1215
ApeKI GCWGC 5 cut(s) 58, 132, 277, 646, 758
ApoI RAATTY 4 cut(s) 359, 742, 813, 825
Asp700I GAANNNNTTC 2 cut(s) 743, 817
AspLEI GCGC 1 cut(s) 268
AspS9I GGNCC 2 cut(s) 18, 941
AsuHPI GGTGA 1 cut(s) 748
AvaII GGWCC 1 cut(s) 18
BaeGI GKGCMC 1 cut(s) 188
BamHI GGATCC 1 cut(s) 220
BanI GGYRCC 1 cut(s) 662
BauI CACGAG 1 cut(s) 269
BbvI GCAGC 5 cut(s) 45, 119, 264, 633, 745
BccI CCATC 3 cut(s) 146, 242, 244
BceAI ACGGC 1 cut(s) 71
BciT130I CCWGG 3 cut(s) 182, 967, 1055
BcuI ACTAGT 1 cut(s) 671
BfaI CTAG 2 cut(s) 519, 672
BfmI CTRYAG 2 cut(s) 470, 868
BfoI RGCGCY 1 cut(s) 269
BglII AGATCT 2 cut(s) 466, 718
BisI GCNGC 9 cut(s) 6, 59, 130, 133, 278, 299, 647, 666, 759
BlsI GCNGC 9 cut(s) 7, 60, 131, 134, 279, 300, 648, 667, 760
Bme1390I CCNGG 3 cut(s) 182, 967, 1055
Bme18I GGWCC 1 cut(s) 18
BmgT120I GGNCC 2 cut(s) 18, 941
BmiI GGNNCC 4 cut(s) 19, 222, 664, 930
BmrFI CCNGG 3 cut(s) 182, 967, 1055
BmsI GCATC 2 cut(s) 1017, 1025
Bsa29I ATCGAT 1 cut(s) 640
BsaJI CCNNGG 5 cut(s) 102, 181, 937, 965, 966
Bsc4I CCNNNNNNNGG 3 cut(s) 15, 730, 938
Bse118I RCCGGY 2 cut(s) 107, 989
Bse1I ACTGG 1 cut(s) 316
Bse3DI GCAATG 1 cut(s) 800
BseBI CCWGG 3 cut(s) 182, 967, 1055
BseCI ATCGAT 1 cut(s) 640
BseDI CCNNGG 5 cut(s) 102, 181, 937, 965, 966
BseGI GGATG 2 cut(s) 1040, 1202
BseLI CCNNNNNNNGG 3 cut(s) 15, 730, 938
BseMI GCAATG 1 cut(s) 800
BseMII CTCAG 1 cut(s) 989
BseNI ACTGG 1 cut(s) 316
BseRI GAGGAG 1 cut(s) 1066
BseSI GKGCMC 1 cut(s) 188
BseX3I CGGCCG 1 cut(s) 1215
BseXI GCAGC 5 cut(s) 45, 119, 264, 633, 745
Bsh1236I CGCG 1 cut(s) 67
Bsh1285I CGRYCG 1 cut(s) 1218
BshFI GGCC 5 cut(s) 8, 107, 461, 942, 1217
BshNI GGYRCC 1 cut(s) 662
BshVI ATCGAT 1 cut(s) 640
BsiEI CGRYCG 1 cut(s) 1218
BsiSI CCGG 3 cut(s) 108, 462, 990
BslFI GGGAC 1 cut(s) 421
BslI CCNNNNNNNGG 3 cut(s) 15, 730, 938
BsmFI GGGAC 1 cut(s) 421
BsmI GAATGC 1 cut(s) 1010
BsnI GGCC 5 cut(s) 8, 107, 461, 942, 1217
Bsp1286I GDGCHC 1 cut(s) 188
Bsp1407I TGTACA 2 cut(s) 880, 1096
Bsp143I GATC 6 cut(s) 220, 466, 718, 872, 1188, 1207
Bsp19I CCATGG 1 cut(s) 937
Bsp68I TCGCGA 1 cut(s) 67
BspACI CCGC 7 cut(s) 5, 25, 129, 299, 419, 423, 666
BspANI GGCC 5 cut(s) 8, 107, 461, 942, 1217
BspCNI CTCAG 1 cut(s) 990
BspDI ATCGAT 1 cut(s) 640
BspFNI CGCG 1 cut(s) 67
BspLI GGNNCC 4 cut(s) 19, 222, 664, 930
BspMAI CTGCAG 1 cut(s) 474
BspPI GGATC 3 cut(s) 215, 228, 1202
BspT107I GGYRCC 1 cut(s) 662
BsrBI CCGCTC 1 cut(s) 301
BsrDI GCAATG 1 cut(s) 800
BsrFI RCCGGY 2 cut(s) 107, 989
BsrGI TGTACA 2 cut(s) 880, 1096
BsrI ACTGG 1 cut(s) 316
BssAI RCCGGY 2 cut(s) 107, 989
BssECI CCNNGG 5 cut(s) 102, 181, 937, 965, 966
BssMI GATC 6 cut(s) 220, 466, 718, 872, 1188, 1207
BssSI CACGAG 1 cut(s) 269
BssT1I CCWWGG 1 cut(s) 937
Bst2BI CACGAG 1 cut(s) 269
Bst2UI CCWGG 3 cut(s) 182, 967, 1055
Bst4CI ACNGT 2 cut(s) 343, 1136
Bst6I CTCTTC 1 cut(s) 891
BstAUI TGTACA 2 cut(s) 880, 1096
BstC8I GCNNGC 3 cut(s) 109, 421, 425
BstDEI CTNAG 1 cut(s) 998
BstDSI CCRYGG 1 cut(s) 937
BstF5I GGATG 2 cut(s) 1040, 1202
BstFNI CGCG 1 cut(s) 67
BstH2I RGCGCY 1 cut(s) 269
BstHHI GCGC 1 cut(s) 268
BstKTI GATC 6 cut(s) 223, 469, 721, 875, 1191, 1210
BstMBI GATC 6 cut(s) 220, 466, 718, 872, 1188, 1207
BstMCI CGRYCG 1 cut(s) 1218
BstMWI GCNNNNNNNGC 6 cut(s) 64, 96, 239, 274, 524, 662
BstNI CCWGG 3 cut(s) 182, 967, 1055
BstSCI CCNGG 3 cut(s) 180, 965, 1053
BstSFI CTRYAG 2 cut(s) 470, 868
BstSLI GKGCMC 1 cut(s) 188
BstUI CGCG 1 cut(s) 67
BstV1I GCAGC 5 cut(s) 45, 119, 264, 633, 745
BstX2I RGATCY 3 cut(s) 220, 466, 718
BstYI RGATCY 3 cut(s) 220, 466, 718
BstZI CGGCCG 1 cut(s) 1215
Bsu15I ATCGAT 1 cut(s) 640
BsuRI GGCC 5 cut(s) 8, 107, 461, 942, 1217
BsuTUI ATCGAT 1 cut(s) 640
BtgI CCRYGG 1 cut(s) 937
BtgZI GCGATG 1 cut(s) 1040
BtsCI GGATG 2 cut(s) 1040, 1202
BtsIMutI CAGTG 3 cut(s) 339, 995, 1141
BtuMI TCGCGA 1 cut(s) 67
Cac8I GCNNGC 3 cut(s) 109, 421, 425
CaiI CAGNNNCTG 1 cut(s) 790
CfoI GCGC 1 cut(s) 268
Cfr10I RCCGGY 2 cut(s) 107, 989
Cfr13I GGNCC 2 cut(s) 18, 941
ClaI ATCGAT 1 cut(s) 640
Csp6I GTAC 5 cut(s) 76, 881, 971, 1097, 1125
CviAII CATG 4 cut(s) 598, 938, 1015, 1021
CviQI GTAC 5 cut(s) 76, 881, 971, 1097, 1125
DdeI CTNAG 1 cut(s) 998
DpnI GATC 6 cut(s) 222, 468, 720, 874, 1190, 1209
DpnII GATC 6 cut(s) 220, 466, 718, 872, 1188, 1207
DrdI GACNNNNNNGTC 1 cut(s) 119
DseDI GACNNNNNNGTC 1 cut(s) 119
EaeI YGGCCR 3 cut(s) 6, 459, 1215
EagI CGGCCG 1 cut(s) 1215
Eam1104I CTCTTC 1 cut(s) 891
EarI CTCTTC 1 cut(s) 891
EciI GGCGGA 1 cut(s) 14
EclXI CGGCCG 1 cut(s) 1215
Eco130I CCWWGG 1 cut(s) 937
Eco47I GGWCC 1 cut(s) 18
Eco52I CGGCCG 1 cut(s) 1215
EcoO109I RGGNCCY 1 cut(s) 18
EcoRI GAATTC 2 cut(s) 359, 813
EcoRII CCWGG 3 cut(s) 180, 965, 1053
EcoT14I CCWWGG 1 cut(s) 937
EcoT22I ATGCAT 1 cut(s) 1040
ErhI CCWWGG 1 cut(s) 937
FaeI CATG 4 cut(s) 601, 941, 1018, 1024
FaqI GGGAC 1 cut(s) 421
FatI CATG 4 cut(s) 597, 937, 1014, 1020
FauI CCCGC 2 cut(s) 412, 416
FauNDI CATATG 1 cut(s) 553
Fnu4HI GCNGC 9 cut(s) 6, 59, 130, 133, 278, 299, 647, 666, 759
FokI GGATG 2 cut(s) 1047, 1189
Fsp4HI GCNGC 9 cut(s) 6, 59, 130, 133, 278, 299, 647, 666, 759
FspBI CTAG 2 cut(s) 519, 672
GlaI GCGC 1 cut(s) 267
GluI GCNGC 9 cut(s) 6, 59, 130, 133, 278, 299, 647, 666, 759
HaeII RGCGCY 1 cut(s) 269
HaeIII GGCC 5 cut(s) 8, 107, 461, 942, 1217
HapII CCGG 3 cut(s) 108, 462, 990
HhaI GCGC 1 cut(s) 268
Hin1II CATG 4 cut(s) 601, 941, 1018, 1024
Hin6I GCGC 1 cut(s) 266
HinP1I GCGC 1 cut(s) 266
HincII GTYRAC 2 cut(s) 258, 582
HindII GTYRAC 2 cut(s) 258, 582
HindIII AAGCTT 2 cut(s) 530, 840
HinfI GANTC 1 cut(s) 144
HpaII CCGG 3 cut(s) 108, 462, 990
HphI GGTGA 1 cut(s) 748
Hpy166II GTNNAC 5 cut(s) 258, 582, 973, 995, 1125
Hpy188I TCNGA 9 cut(s) 82, 103, 140, 151, 220, 627, 847, 1048, 1207
Hpy188III TCNNGA 3 cut(s) 66, 247, 606
Hpy8I GTNNAC 5 cut(s) 258, 582, 973, 995, 1125
Hpy99I CGWCG 3 cut(s) 116, 350, 353
HpyAV CCTTC 4 cut(s) 31, 764, 828, 1111
HpyCH4III ACNGT 2 cut(s) 343, 1136
HpyCH4IV ACGT 3 cut(s) 120, 260, 410
HpyCH4V TGCA 9 cut(s) 171, 374, 443, 472, 793, 1010, 1030, 1038, 1090
HpyF10VI GCNNNNNNNGC 6 cut(s) 64, 96, 239, 274, 524, 662
HpyF3I CTNAG 1 cut(s) 998
HpySE526I ACGT 3 cut(s) 120, 260, 410
Hsp92II CATG 4 cut(s) 601, 941, 1018, 1024
HspAI GCGC 1 cut(s) 266
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Kzo9I GATC 6 cut(s) 220, 466, 718, 872, 1188, 1207
LmnI GCTCC 2 cut(s) 104, 928
Lsp1109I GCAGC 5 cut(s) 45, 119, 264, 633, 745
LweI GCATC 2 cut(s) 1017, 1025
MaeI CTAG 2 cut(s) 519, 672
MaeII ACGT 3 cut(s) 120, 260, 410
MaeIII GTNAC 2 cut(s) 521, 1136
MalI GATC 6 cut(s) 222, 468, 720, 874, 1190, 1209
MbiI CCGCTC 1 cut(s) 301
MboI GATC 6 cut(s) 220, 466, 718, 872, 1188, 1207
MboII GAAGA 7 cut(s) 153, 728, 879, 908, 1119, 1183, 1186
MflI RGATCY 3 cut(s) 220, 466, 718
MhlI GDGCHC 1 cut(s) 188
MmeI TCCRAC 1 cut(s) 105
MnlI CCTC 6 cut(s) 97, 234, 892, 993, 1084, 1087
Mph1103I ATGCAT 1 cut(s) 1040
MroNI GCCGGC 1 cut(s) 107
MroXI GAANNNNTTC 2 cut(s) 743, 817
MseI TTAA 3 cut(s) 393, 780, 1173
MslI CAYNNNNRTG 2 cut(s) 1019, 1025
MspA1I CMGCKG 2 cut(s) 419, 878
MspI CCGG 3 cut(s) 108, 462, 990
MspR9I CCNGG 3 cut(s) 182, 967, 1055
Mva1269I GAATGC 1 cut(s) 1010
MvaI CCWGG 3 cut(s) 182, 967, 1055
MvnI CGCG 1 cut(s) 67
MwoI GCNNNNNNNGC 6 cut(s) 64, 96, 239, 274, 524, 662
NaeI GCCGGC 1 cut(s) 109
NcoI CCATGG 1 cut(s) 937
NdeI CATATG 1 cut(s) 553
NdeII GATC 6 cut(s) 220, 466, 718, 872, 1188, 1207
NgoMIV GCCGGC 1 cut(s) 107
NlaIII CATG 4 cut(s) 601, 941, 1018, 1024
NlaIV GGNNCC 4 cut(s) 19, 222, 664, 930
NmeAIII GCCGAG 1 cut(s) 64
NmuCI GTSAC 1 cut(s) 1136
NruI TCGCGA 1 cut(s) 67
NsiI ATGCAT 1 cut(s) 1040
PasI CCCWGGG 1 cut(s) 966
PctI GAATGC 1 cut(s) 1010
PdiI GCCGGC 1 cut(s) 109
PdmI GAANNNNTTC 2 cut(s) 743, 817
PfeI GAWTC 1 cut(s) 144
PflMI CCANNNNNTGG 2 cut(s) 730, 938
PkrI GCNGC 9 cut(s) 7, 60, 131, 134, 279, 300, 648, 667, 760
PpuMI RGGWCCY 1 cut(s) 18
PsiI TTATAA 1 cut(s) 482
Psp5II RGGWCCY 1 cut(s) 18
Psp6I CCWGG 3 cut(s) 180, 965, 1053
PspGI CCWGG 3 cut(s) 180, 965, 1053
PspN4I GGNNCC 4 cut(s) 19, 222, 664, 930
PspPI GGNCC 2 cut(s) 18, 941
PspPPI RGGWCCY 1 cut(s) 18
PstI CTGCAG 1 cut(s) 474
PstNI CAGNNNCTG 1 cut(s) 790
PsuI RGATCY 3 cut(s) 220, 466, 718
PvuII CAGCTG 1 cut(s) 878
RruI TCGCGA 1 cut(s) 67
RsaI GTAC 5 cut(s) 77, 882, 972, 1098, 1126
RsaNI GTAC 5 cut(s) 76, 881, 971, 1097, 1125
RseI CAYNNNNRTG 2 cut(s) 1019, 1025
SaqAI TTAA 3 cut(s) 393, 780, 1173
SatI GCNGC 9 cut(s) 6, 59, 130, 133, 278, 299, 647, 666, 759
Sau3AI GATC 6 cut(s) 220, 466, 718, 872, 1188, 1207
Sau96I GGNCC 2 cut(s) 18, 941
ScrFI CCNGG 3 cut(s) 182, 967, 1055
SduI GDGCHC 1 cut(s) 188
SfaNI GCATC 2 cut(s) 1017, 1025
SfcI CTRYAG 2 cut(s) 470, 868
SinI GGWCC 1 cut(s) 18
SmiMI CAYNNNNRTG 2 cut(s) 1019, 1025
SpeI ACTAGT 1 cut(s) 671
SsiI CCGC 7 cut(s) 5, 25, 129, 299, 419, 423, 666
SspI AATATT 2 cut(s) 285, 1063
SspMI CTAG 2 cut(s) 519, 672
StyD4I CCNGG 3 cut(s) 180, 965, 1053
StyI CCWWGG 1 cut(s) 937
TaaI ACNGT 2 cut(s) 343, 1136
TaiI ACGT 3 cut(s) 123, 263, 413
TaqI TCGA 2 cut(s) 226, 640
TatI WGTACW 3 cut(s) 880, 1096, 1124
TauI GCSGC 4 cut(s) 8, 132, 301, 668
TfiI GAWTC 1 cut(s) 144
Tru1I TTAA 3 cut(s) 393, 780, 1173
Tru9I TTAA 3 cut(s) 393, 780, 1173
TscAI CASTG 3 cut(s) 346, 1002, 1141
TseFI GTSAC 1 cut(s) 1136
TseI GCWGC 5 cut(s) 58, 132, 277, 646, 758
Tsp45I GTSAC 1 cut(s) 1136
TspDTI ATGAA 5 cut(s) 181, 560, 570, 1003, 1191
TspGWI ACGGA 4 cut(s) 442, 528, 576, 1047
TspRI CASTG 3 cut(s) 346, 1002, 1141
Van91I CCANNNNNTGG 2 cut(s) 730, 938
VpaK11BI GGWCC 1 cut(s) 18
XapI RAATTY 4 cut(s) 359, 742, 813, 825
XmnI GAANNNNTTC 2 cut(s) 743, 817
XspI CTAG 2 cut(s) 519, 672
Zsp2I ATGCAT 1 cut(s) 1040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.